CmaCh12G010260 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G010260
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr12: 8166054 .. 8171582 (-)
RNA-Seq ExpressionCmaCh12G010260
SyntenyCmaCh12G010260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAATCTCTCGATTTGATAAGGAAGACGCAATCGACGGCCAGATCTCATCAGCTGCTAAGAACGGTGTACACCAGCGGTGGAAGGAAGCTGGAATCTTCATTTTCAAGGAAAAAAAGATAGCATCGAGCTACTACAGATTGTTGTAGGTAAGAGAAAAGTAGGTCAAGAATTTGAGTTCATTTTCGTGAAATTTAATGTTTAGAAATTGAAGGTGAAAATTGACAAATTGAATCCAAGTATAGGGATAGAAATGAAGGCTTTCTAGTTGAACTATTTCTTGATAATTGTTCAGATTCTATGAAACATTTTGTTTGAATCTTGGAGTTTTGTTGTTTCTGTGAGACATATATTACAAATCTCTGGATGATCTTTAAGCAAGGATGTGATGATATTAATCGAAACGTTCAGGCTTCTGTCAATTGAATTCTTTACAACATTTCACACATTTTAAGTGGTATTTTGTTAGTATTTCATTCAAAATGTAAATATTGATTAACGTCTCGTATTGATATTGAATGTTTTGGATATGTGGATACAAAAAGATGTTGATCAATGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAACATCCTTCCCTTTATAAGGGCGTGGACACCTTCCCCTGGCAGACGCGTTTTAAAGCCTTAAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCCGTTACAAATTGTATCAGAGCCAAACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAGAGGGTAGACACCAGACAGTGTGCCAGTAAGGAACGCTGGGCCTAAAGGGGGGTGGATTTGGCGGGGGTCCCACATCGATTGGAGAAAGGAAAGAGTGCCAGCGAGGACGTTGGGCCCCAAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAACAACCTTCCTTTTATAAGAGTGTGGAAATCTTCTCCTACCAGACGTGTTTTAAAGCCTTGAGGGGAAGCCTAAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGACTATTACAATCTATATTTAAATTTGTGTATGTTTGTCCTGTTTTGAGTATCTTTTTATAATTGTTACATGTGGTTTCTTTTGGATCGATATTCAAAGATTTGATTTGGCAGAAGGATAGGTCTATTTTGGCTTATCAAAACTGAGATAACAGAGTCATTAGATTATCTCTCTAACATGTCCAAACACATAAAACAACATGAGCAGTGAATTCATTAGTTGTACATATATATTATATCCTATGAATCAATGAGATTTTATAGTTTAATCTGCTAATTGAAAGTAGAACATTATTTACTATGGATACATTTAATGGCTTCTAGTAGGCTCTCTTTTTTCAGTGGCTTGCCTAAATGAACATCCATTCCAGCTTCAATTGTTCTTCGTGCTTCTTCCCCTGATGCATGGGCAGTCAGTGCAATGATTGGAATGTGAGTGTTGTAATCTCTTTCCACCTTCCTTATCTGTCTAGTTGCTTCATATCCATCCATTACGGGCATCTACCATATGCAAATTCGCATAAAAATCAATCTCAAATGAATATGAATTGTTGCAGGAAGCTAAATACTTGATCATTTGCAAATATGTTCTAGTTGGAAGTAGGATAATAAGTGCATTTCCATTTAGTAGCTAAGTTCTTACCTCGCAGTCCATTAGTATGTAGTCGTAAGGAAGAATATTTGAAGCTCCGTGTTTTCGCTGATTGCCTAAGCCATTGCAAACGAACTCCAAAGCTGCCTCTCCGTTTTCACATATCTCAACAGTTGCACCAAGTTTTTCAAGGTTCAATCTAGCTAGTCTTTGTAACACTACATTGTCCTCTGCAACCAAGATTTTTTTCCCACCTAGAGGTTTTTGTATTTCTTGGTGTTGACTTTGTTGCCCACTAACTGGTGAGATTCTAGTCTTTGAGCCTAAAAAAGAATGAATTTGATTCAATGACAAATTCTTTGGAGAGGTCCCCGTGCTTGATTTTGTTTCTTGTTGTACTCTTGTTGCAATTTGGTCTCTAAAATTTGGTGAATTCCTCTCCTTGGCCTTACCACAATATTCGTTTAGGGATGAACTTGGATCTTTTGGAACACTGTCAGTCTGATACAATCTACTACTTTCTCTGCTTTGTAATGTGCCTCCAAACTCTGGAAGAAGTCTTATCACTTCATACAAACGAGAACCATGAAAAGGTCTGGATATAACAACATCGTTGAACTCCAAAATGTTTGAGTCTAGCCCCTTGTGGTTGACGATGTGTGACATTTGATTCTCCACCAGCCAAACAACCTTACAATAGGCCTCTTGGAGTCCAGTTCTAAAATTAGACACCATATTGCATATTTCTGTAAATGGTCCTGCACTGGCATCGATTAGAATCAAGATGAAGGTAATTCCACCCTTGGGACTAGTCTTTTTGAATACTGAAAGCAAGTAATTTGTCTCTTCTTTCATTGCACCCAAAGAAACATTTGTATTTAGCCCATTGCTGGAGTTACCAGATGCTGATTTGTTTAGGTAATCACTTGATGAACTATTACCTGACCTGCCTCTTGGGCTGTGCCTAGAATGGCTCTGTTTCTCTAATATTTTCTGTAGATTGAAAAGAAGTTGCTCCCACTGATTCATTGCCAATACTCTTACACCAAGACTTTCCATGAATTTCTTGCATATCATTCTTCGTTGATCATTTCGAATTAAGAGAAGGACACGAGATGTTTCGGTTTTTAAACTAGTAGTTTGTATTGGTCTAGGGGAATGGGGACTTGGACTGGGGGCTCTAAATGTCAGTTTTGAGGCAGCCAATGATTGACATGTGTTATTACCAGAATTGATGTTGCCCTCTGAAACATTAAGAAGAACACTGAACCTGAAGCATGTTCCCTTTGCTCCAATCTCTTTGTCTAAAATTTCTATATCCCCTCCCATCAAGCGTACCTTCAATAATAGAAACAAATGTACTTGAAATTTCTTTGTTCTAAACAATGAGCTGAGCTTCAACTTAAACATTTAGTAGCAAATTAGCAAGATACATGAGGAAAAGTTACATACCAAAGATTGAACAATCCCAAGTCCCAAGCCAGTTCCTTGGCCCTGAGCTGTTTCTTTTACCTGGACGTAGTTCTCGAAAACCAGTTTCCGCTTCTCTTTAGGAATGCCTTTCCCTGTGTCATCTATCTCAAATATAAATTCATAACAATTAGGATTCAAATGAACTCCATTATCTGCGGTTTGCTGTTCTCGTAATGTTTGTGTGTCTTTGCATAATAAGAAGGATAGATGCTTCAATATTTCACCATTGTGATTCGAAGGAATCAACTTATTCTGCATATCAGGTAAATTCTTCACCCACGCTCGAACAGTTACGTGACCTTCGGAAGTAAATTTAACAGAATTGCTTAGTAAATTGCACAACACTTGTTTAAGCTTTCCTCTATCACCTTTCACTTGTGAAAAGTTGATAATGGAGCCATCATAAGGATCTAATACTATGTCTATTCCTTTCTTCATTCCAACTGGATGATACAAATCTACCACATCCTCGAGAAGTTGACTCAAATTAAATTCTTCTTCCTCAAGCTGTGTTTTTCCTGCTTCAATCTTGCTTGTATCCAAAATAGAGTTCAATATGGCTGAAATAGATTATAACCAAATTTTTATATGTTTGACAATCAAGGAGATGAATGTTCAAGTTTTGAATGTGAATTACCTAGAAGATCCTTTGTACAACCATCCATCTGTTTTAGGTTTATGTTTAAATCCGAACCTGGGGCAGCTTCATTATGGCATATCTCAATCAAGCCAATAATGCCTGCCAAAGAAGCGCGAATGTCGTGGCTTGCTTGTGTGAAAGCGACACTCTTGTTCATACTCTTTCTCTCTGCTTGTTGAGTTGCTTCCATTTGTTGAATGAGTTTGGCACATAAATGCATCTCTCTGTTTGCTGCTCTAATGACTATGAACACAAAACCAAAAATGGAGATAACTGTAGTACTCATTGTTAGTATAAGAAGAATTAGTCCCATTCTACTACTCTTGTGGACAAGGCTAGCTAACTCTTTCTGAGGCAATACTAATGAATAGACCTGAAATAAAAACATAAGTAACAGACAATTCTTATAATTATGAACTGATTCATATGTTCTTAACTTTTCAGGAAATACGTTCTTGTTGGAAATGATGACTTACCAACTGCACACCCAATATCTCAAGTGGAGAGCAGTATATCATATAGTTTGTACCCAAGAGATTGAAGAAATAATCCTTTGCATCAAAAGTTTCTTTCCTAGGCCGACATGAGATATTCTCGACGCGAGCAGTTTCATTGCCATTCGGCTTCAAGAACCGAAATGAAGCCGAACCATTAGCAAGGACCATCTTAATGTTCTGAAACCCTTGGACAAGAATTTCTCCTTCAGTGCTTGCCAGGTACAATCTCCCTCCTTGTCGTTCAATGCTAGTGAAGAACAGATCAATGAGTGCTTTGATTGAAAACCCAAATGAGAGAACACCATTTCTTCCATTTACTCTGACTGTGTTGAGCAACAAAAGTTCTTGATCTGAGCTCCATTTTTTCCCTACAGAGGCACTTCCTTGGTTATTCAGGGCGTCTCGAAACCAGCTTGTATTGGTAGTGACTGAGGGTAGGGTCTCTACCATATCCCCATATAATTCCCCTGTGCTGGAGTTTACTAATTGAGTCAGCCAACTCCATTCCCTTCCTGGAGGAGGAGGAGGAGGAGGAGGAGGATAGAATTTGGCAGTGAAGGTTGAGTTAGAATAGACTGCAAAAGTTTGGTTTTTGTCAGTGTAGTATGAGAAGAATAGACCATCTATCCCAATATAGGAAATTTGAGTCAGGTATGGAATGATTGCAAATCCTTGAAATAACATAGGAGCAATCTGAAAGATCAAAACACATTCAAAACATTAATAGTTTGAAGACGAAATTGACATTACTCAATGTTTCGAGGCCAAATCGAGTCAACCATTTAAGATCAAGGATCCTTTTTATTATAGTCGGATTTAAACAAGTTGAGGACAAGGAATTAGGTATCTATCTGCCAACCTTAGATTTTAGTTCAAAAGACGAAATCTGAGTTCCATTGAGAGATGAGTCGAAAGTTTTAACTAAACTGGTTGTTGACGAATAAATTGGTTGAATCGAAGTTGATATTCTCTCCATCTCGATTGATATTTCTAAGGTATCATTGTAGGTATTCGTGACGAGATGAGAATGAATACGTTTGATCGTACCGTACCAGAATGGAATCAACAAGCTTGGAAGTACGAGTAACACAAATGCCTGCAATGGAGGTTCGAGTTTGAATAGTTTATGTCATTTTGGAAGAAAAAGAATTTGAATATGGATTTAAATGGAAGAATTATTTATTACCAATAAAATGGAGAAAGAAATTGGCCTTGAAATTATGAACAAGAAAAGCTTCATGGCTGTTCTCTTCTTCTTCTTCG

mRNA sequence

ATGGGAGAAATCTCTCGATTTGATAAGGAAGACGCAATCGACGGCCAGATCTCATCAGCTGCTAAGAACGGTGTACACCAGCGGTGGAAGGAAGCTGGAATCTTCATTTTCAAGGAAAAAAAGATAGCATCGAGCTACTACAGATTGTTGAAATACGTTCTTGTTGGAAATGATGACTTACCAACTGCACACCCAATATCTCAAGTGGAGAGCAGTATTCGTGACGAGATGAGAATGAATACGTTTGATCGTACCGTACCAGAATGGAATCAACAAGCTTGGAAGTACGAGTAACACAAATGCCTGCAATGGAGGTTCGAGTTTGAATAGTTTATGTCATTTTGGAAGAAAAAGAATTTGAATATGGATTTAAATGGAAGAATTATTTATTACCAATAAAATGGAGAAAGAAATTGGCCTTGAAATTATGAACAAGAAAAGCTTCATGGCTGTTCTCTTCTTCTTCTTCG

Coding sequence (CDS)

ATGGGAGAAATCTCTCGATTTGATAAGGAAGACGCAATCGACGGCCAGATCTCATCAGCTGCTAAGAACGGTGTACACCAGCGGTGGAAGGAAGCTGGAATCTTCATTTTCAAGGAAAAAAAGATAGCATCGAGCTACTACAGATTGTTGAAATACGTTCTTGTTGGAAATGATGACTTACCAACTGCACACCCAATATCTCAAGTGGAGAGCAGTATTCGTGACGAGATGAGAATGAATACGTTTGATCGTACCGTACCAGAATGGAATCAACAAGCTTGGAAGTACGAGTAA

Protein sequence

MGEISRFDKEDAIDGQISSAAKNGVHQRWKEAGIFIFKEKKIASSYYRLLKYVLVGNDDLPTAHPISQVESSIRDEMRMNTFDRTVPEWNQQAWKYE
Homology
[Close]
BLAST of CmaCh12G010260 vs. NCBI nr
Match: KAG7021048.1 (hypothetical protein SDJN02_17736 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.0 bits (214), Expect = 9.5e-14
Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 0 

Query: 1  MGEISRFDKEDAIDGQISSAAKNGVHQRWKEAGIFIFKEKKIASSYYRLLKYVLVGNDDL 60
          MGEISRFDK+DAID QISS ++           +     +K+ SS+ R   Y+       
Sbjct: 1  MGEISRFDKDDAIDAQISSVSRT----------VCTSGGRKLESSFSRKKDYI------- 60

Query: 61 PTAHPISQVESSIRDEMRMNTFDRTVPEWNQQAWKYE 98
               + Q+E  IRDEMRMNTFDRTVP WNQQAWKYE
Sbjct: 61 ----ELQQIEVGIRDEMRMNTFDRTVPAWNQQAWKYE 76

The following BLAST results are available for this feature:
BLAST of CmaCh12G010260 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G010260 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G010260 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7021048.19.5e-1449.48hypothetical protein SDJN02_17736 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmaCh12G010260 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G010260.1CmaCh12G010260.1mRNA