CmaCh12G009490 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G009490
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTATA box-binding protein-associated factor RNA polymerase I subunit B
LocationCma_Chr12: 7425143 .. 7439281 (-)
RNA-Seq ExpressionCmaCh12G009490
SyntenyCmaCh12G009490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCAACTAAAACGATTCTTCGCCAAATATAGAATTAAGGATAAGAATCGCTGAAAGCAACCCTTCAATACAAATCACCATTTCTATAAATTACATCGACTGTGTGCGAGAGCAATGGTTAGTGGCTGCGGCCATTTTTGGAGCTTACGTCAATTTTAATGGCTTCTCTCTGGAACCCACCTGTTGCCTCCTTCTCCCCAATCAGACCCACCTTGAATCCATCAAAAATGGCGTCCAATTTCAACCATACCCTTCTTCGCAGAGGCAACGATACTGGCATTGGCGATGGCAAAGGCGTCTCGTCTTCTCTTTCGATGGCTACTGGTTGGAGCTCTGATGGTGGCGATAAGAGCACTAGGAAGCTTCCTGTTCTGCTGTTTGATATCATGGGTACCATTGTTCGTGATCCATTCTATGAAGATGTTCCCGCCTTTTTCAGGTGATTTGACCTTTTGTTTTGATTTTTAGTGTGAATTGTGCTGTATAGTTTATGGGAAGATCTGTTATCTGGATGAATGAAAACAGGGGAGAAGAAGTATTGTTTACTGATTTTGAAGATATATGGTTTGTTAATCCCATGGCCATAGTGCATTGAACATGTTTGCTTAAATGACTGATGAAATTCTCCTTTTGTGTTCATATTGTACACTGGCTTTTACAAATCATAGAACTTATAATCCGTTGCAAATCAATTCGAGCGTAGCTCAATGGATATAGGGGCTAGCCAATTCGAGCGTAGCTCAATGGATAAGCAGCTGGTCAATTCATTCAAGCATATCTCAATGTTTCAGGGGATAGCCAATTCGAGTATAGCTCAATAGATAAGCGACTAACCAATTCGATCATAGCTCAATAGATAAGCGACCAGCCAATTTGAGTATAGCTCACTGGATATAGCAGTTAGCCAATTCGAGTATAGCTCAATGGATATAGCAGCTAGCCAATTCGAGCATAGCTCAATGGATAAGCGGCTAGCCAATTCGAGCCTAACTCAATGATAAGCGGCTAGCCAATTGGAGCATAGCTCAGGGGCTAGCCAATTCAAGCATAGTTGAATGGAGGTAGGAGCTAGCCAATTGGAGCATAGCTCAATGGATAAGCGGCTAGCCAATTGGAGCATAGCTCAATAGATAAGCGACAATTGTCGATGATTCGATGGTTCGATAAACTAATGGTCGATGATTCGATAATGCGCCTGCAATTGTTGACTTGACAAAGGGAATCATAGTATATAGGTTTGAACTTCCCGTTTCTCAACTGGACTTCATAAATACTCTGTTCTCATCTTGTCCTATGGGTCCGGTACAAATAGAACATGCATGGTTGTTTTGTCTGTAAGTATATCCCTTTTCCCGTTGGTGCTTCTGAGGTTTGTTTCTGTAATTTAGCTTTCAGAAGAGAAGAAATCTTGACCACACGAGGAGCTTTTACTTGTTTGTGCAGAAGGGGAATAACTTTTTTCCTGTTAACTTCTCTTTCATGTTTCATTTGTTTGAACTTTCACATCATTGTTAGCTTTTTAAGGTTTATTTTAAGGCTATAAATAGTCATTCGTGTTGTTGATTTAGTATGAAGATTTTAGATATTATAATGAAAGTTGCATATTATAAGCCATGAACTTCTTCTTTTGCATTTCTTGTGTTTATATTTGCATGTTAGAGTCATTCAAGTAGTCTTGATCAAACTATCATGTGAAATGATTCGAATCACGAGTTTAGAAACGAGTTTTCTTAACTCTTGATCTTGATCATCAAGGTAATCCATTCCTTAACATTTCCTTGGGTTGATTCCTTATCATTTTTATGGTTCTTGGATAATTTAGATCTTAAGAACCGTTTAATAAAGTAAGTTGTAGTTTCCACTAGTGTGCAGGCTCTTTGTTTTTGTGAAATTTATTACTTAGTATGATGCCTTAACTAATTGGATCTGAATTCACTGTTTAGAATGCCCATGGAGGAACTACTTGAACTCAAACACCCAACCGTGTGGCTAGAATTTGAGAAGGGTTTGATTGATGAGGTATGTCTACCTTCTTATTAGCCTATGTTACCATTTAGGAGTGATAAAAGGAACCTTTAAGGTGGTTTATATAGCAATAATGAGAATACAAAGAGAAGTTGGAAATAAAAAGAACAATAATAATAAAGGAAAGAAATATTACGTGAGATCCCACATTGGTTGGGGAGGAGAATGAAGTACTCTTTTATAAGGGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAAGACCTTGAGGGAAAGCCTGAAAGGAAAAGCCGAAAGAGGACAATATATGTTAGCGTTGGGTTTGGGCCATTACAAATGATATTAGAGCTAGGCAGTGAGCGATGTACTAGCAATGAGGCTAAGCCCCAAAGGGGGGTGGACACGAGACAGTGTGCTAGAAAGGATGCTAAGCCTCGAAGGGAGGTAGATTGGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGTCAGCGAGGATGCTAGGCTCCGAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGAAGAGGAGAACGAAACACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCATTTTAAAAAGTTTGAGGGGAAGTCTGAAAGGGAAAGCCCAAAGAGGATAATATCGGCTAGTAGTAGGCTTGGGTCGTTAGATAGGGAGACTACCATGGTGAATTTGCCATGTTTTCATAAGCTCTCACCCTCTGAGGAGCGGCATTCTGATTCCTGATGGGCTTGAATGCCACCATTGCTTTCTCTTCCCTTTATTTCTTCTTCGAGTTTTACTGTATTTGCTTCTGCCCCTTCTAAAACAAATTTGACCTCTAGTGATCATTGAAGTTCTTTATAGTTCACTCAACTCAACTGATTGGTTAAAAAAATGAAGGGGATAGGATATAGTTGAACACTTTATTTGCTAGTTCTTAATGCCTGACTTATATTTCTAAAACCTTTTGTTTACTTCAAGGCAGAGCTGGAAAAAAAATTCTTTAAAGATGGGCGAGCTGTTGATTTTGAAGGTTTGCTGGGTTCTCTTCCTGTTTTTCTTTTTTTGTTCCTTTTTTGTTTCCAATTTTATGTCATTCTCTTTCCATGTTCTAAAAGAATAGAAATTACTTTAGAAAGTGTGAAATCTCACCTCGGTTAGAGAGGGGAACGAAACACTCCTTATAAGGATGTGAAAACCTCCCCCTAATAGACGCGTTTTAAAAACCTGGAGGGAAAGCCCAAAAAGAACAATATCTGCTAACGAGAACGCTGGCCTCCAAGGGGAGTGGATTGTGAAATCCCACGTCGGTTGGAGAGGGGAACGAAGCATTCGTTATAAGAGTGTGGAAACCTCTTCCTAACAGACGCGTTTTAAAAACCTTGAAGGGAAGCTCGAGAGGTAAAGCACAAAGAGGACAATATGTTGGGCCGTTACCGAAAGAGACTTTTTGGATGTAAATAAAAACGTGTGTATACCCATGCATGATGTCAGTATACTCTTGCATATAAATGATCATGTTGATTAGAATGATTGGTAATGCGACTTAAACTGATTTACCACAACTTTCAGAATATTTGAACACAAGTTGTCCAATTCAATACGCTAATACTCCGTTTATGAGGCTTTATCAAATCTTTTTGAAGGTTGAACTCTGGAAATTAACATACTGAAAATTTTTGCACTATCTTTCACTCTTATTTGAAAGGCAATAAACCAATTGCTTAACTCATTTACTTGGGTTTTATACTTCTGTTTTTTACACATGCTACTTGAAACCGCCTAAGCCCACCACTAGCAGATATTGTCCTCTTTGGGTTTTCTCTTTCGGGTTTTCCCTCAAGATTATTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCTTTTATTAAGTGTGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCCACCCTCCTTTGAGGCCCAGCGTCCTCGCTAGTACTTGTTCCTTTCTCCCATTGATGTGGGATCGCCACCAAATCCACCCCCTTCAGAGCCCAGCGTTCTTGCTGGCACACCGCCTCATGTCCACCCTTTGGGTTATTACATTCTCTTCTTTATCATTATTTATAATGTAAATATTAGCCGGTGTACCGTGTGTTCTTCCTCTTTTAGCTTCAATTAACATCATTTTATCTATCTTTCCAGGCCTCAAAAACTGTATGATAAGGGGTTACTCCTACCTAGAAGGCATTGAAGAATTGCTAAATGCACTAAAAGAGAAAAACTATGAAATGCATGCCTTCACAAACTATCCTATTTGGTTCGTGAGAAAATAATCTTAGCATGCCATTTCTTGCGATTAAATGTGTCATTATTAACTTTTGTGATTTCATTTGGCAGGTACGAAATGATCGAGGAGAAGTTGAAAATCTCGAGATATCTATCGTGGACCTTCTGCTCTTGTAAAAACGGTAATGCTCAAATTCTGAAAGGCTTTCCTCTTCTTTAAGTTCTCCTCCCTTGCCTCTCATCCTTTCTGTCGTTTTATTGACATTATGAAGCTACGTAGAAAATGAATAAAGTTTATAACATGGTTTTGAGACAATGATATAGTAGAGTTTTAAAGCGCGTCTGCTAGGGAGAGGTTTTCACACTCTTATAAAGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCCAACCCCCTTTGGGCCCTAGCGTCCTTGCAGGCACTCGTTCCTTTCTCCAATCGATGTGGAACCCCCACCAAATCCACACCCCTTCTGGGCCCAGCATCCTTGTTGACACATCGTCTCATGTCCACCTCCCTTCGGGGCTCAACCTCCTCACTGGCACATCGCCCGGTGTCTGGCGCTGATACTATTTCTAACAGCCCAAGCCCACTGCTAGCAGATACTGTCCTTTTTGGGCTTTCCCTTTCGAGCTTCCCCTCGAGGTTTTTAAAACACGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATACTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACACTAACTCCGAAACCAAAAACTTCGAATACAACTCATCAACACAATCTGAACAAAAGTCTCAAGAAACCGTTCCATCAAGAGCTCACATCAAAAGTTGAGTAACTGCAAAAATTTTCAGATGTAGTATACAAAGAAGCCACATTTAGCTTAACAAGATCAAAGTCTTTCTTCCAGAAGATCCTGTTTTCCTTCAAATAAGTGCTGAACTGTCCAATAAACCCACACAATTGGTTTCACAATGTTGACCTATAATACTTTTGCTCTCCCTTTCAAGCCATGACCTTTGCTACCTTCTTACAACTCTCAGTCCATCAACCGACCATAAAAGCTCAAACCAACATACCCACTTACTAACTGGTTCTTGCACAATTCCCTTTTTGTTTAGATCTAGAATGACTCACTCCCCCCTCACACAAGGAGTTGTTGTAACGGCCCAAATCCACCGATAGCAGATATTGTCCTCTTTGGACTTTTCCTCAAGGCTTTCAAACGCATCTACTAGGGGAAGGTTTCCACACCCTTTTAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGATATCACAATCCACCCCTCTTTGGGACCCAGCGTCCTTGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACTGCCCCCAAATCCACCCCCCTTTGGGGCCCAGTGTCCTTACTGGCACACCGACTCGTGTCTACCCCCCTTCAGGGAACAACAAGAAGGCTGACACATTGTCTGGTGTTTGGCTCTGATACCTTTTGTAACGGCCCAAATCCACCGCTAGTAGATATTGTCCTCTTTGAGCTTTCTCTTTCGGGCTTTTCCTCAAGGCTTTAAAACACGTCTGCTAGGGAAAGGTTTCCACACCCTTAATAATGGTGGTTTGTTCTCTCCTCTCCAACCAATGTGGGACACCACAGTCATACTTTCTTAGTTCAACAAATATAATAACTTGATATTGTAAACTTTTGGAGGTACACTGAACTAGTCATACTTTCTTAGTTCAACAAATATAATAACTTGATATTGTAAACTTTTGGAGGTACACTGAACTAGTCTAGACCGCCTTAAAATTGATTGCTTCTAAACATCTAAGTAAAAATAAACTGAAAAATGTTTAGCGTCTCTTTCTTCTGTGTTCTTTTCTTCCATCATGTCGTTTTTCAGATATCAGGAAAGTAGCGAAGTTGGATATGCCATTGACTTATAAATTATATTGAATCCTGTTTTTCATATGTTATAGGAAAGAGGAAGCCGGATCCTGATTTCTACTTGGAAGCCCTGAGACATCTTGAAGTTGAGCCAGCTAGCTGTATTTTCATTGATGACAGGTTTGACTTATTTAAAGTAAAGAAAATGAAATGGAATTATGATCGGAAGCCTCTATACATTTTACCAATTTGTTCTTATTATATAGATATCAAGTAATACATCAGAAATCTATCCCATATGCATAAGGTCACTTTCCTGTTCTGTCGTTGAATGTTGACATAGTAGGGGTGAGATTTCACGTTGGTTGGAGTGGAGAACGGGACATTTCTTATAAGGGTGTGGAAACCTTTCCCTATTAGACGCGTTTTAAAACCTTGAGGGAAAGCCCGGAAGGGAAAGTTCGAAAAGGATTGTCTGCTAGAGGTGGGCTTGGACTGTTACAATTGGTATCAGAGCCAGACATCGGGCGGTGTGTTAGTGAGGATGTTGGGCCACCAAGGAGGGGTGGATTGTAAGATCCCATATTGGTTGGAGAGGAGAACAAAACATTTCTTATAAAGGTGTGAAAACTCTCCTTAGTAGATGTGTTTTAAACCTTGAGGGAAAGCCCAAAAAAAACTATTTGCTAGCAGTAGGCTTGAACTACTACAAATGGTTATCTAGAGCCAGACACCAGGCGGTGTGTCAACAAGGACGTTGGGTTCTCGAGAAGAGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGAAAGCCTAGAAGGGAAAGTTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACATCGGGCGGTGTGTCAATGAGGATGTTGGGCCACCAAGGAGGGGTGGATTGTAAGATTCCACATTGGTTGGAGAGGAGAACAAAACATTTCTTATAAAGGTGTGGAAACTCTCCTTAGTCGACACGTTTTAAACCTTGAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGTTAGACTTGGGCTGTTACAAATGGTTATCCAGAGCCTTTTCAGTACTAGTCAATGGGTAGCTTAGCCGAAATTTGGACTTTTAGTTCAACTGGTTCCTTGGGTTAAACTATTCATAAAAGGTTAAACTAGCGGTAGCTTTTGGGTCGAGCGGTGATCTAGCATGATATTAGGTAATCTCATTTATCTTGATTTCCACTTGTTTGACCTTTTATAAATTTTCTAGTCCATGAGTGAGGGAGAAAATTTATCTTAACCCGTCAACTTAAATTTTTGGGTTGAACGGTGATCTATCACCTTTCGTTTGTTATCGAATGGAGATTTAAAAAATGATACAAACTGCTTTTCATCTATTGTGCACAAATAGAAGTGAGAATTTACCACTTTCTCATTACAAGTTTACTTGCAGAAAGAAAAACGTAGAAGCAGCGAAAGAAGTCGGCATTGTAGGCTTACATTTCAGAAGTGCAGATTTACTACTACAGGATCTCTGTCGTCTGGGACTCGATATTTCACCCGATATTCATCGCTTGAACTCGGCAGCATCGACATGAACGTACCGGACACGTTGCTGAGGTTTGTTCTGTTTCTTTTTCTTGATTTGGAAATGAAAAATGAACTCATCTTTACTATGATTCAATTGATTTCCATAATGGCATGCTGTGTTGAGATTGTTCTGGCTGTGGATTCTTTTGTGGGATTCTGTTTACTGTTCATAATGTTCAAAACATTCATCTGTAATCAATACAATTATGAGCAAATCAATACTCATCTGTTCTTCATTATGTTCTCTTTATGATTGGAAGAAAGGACATGAATATGGAAGCAAGATCAACATTGTCTCTTAAGAATATTACTATGTTTTTTTTCTAGTTGCTGAAAAAAAGTGCCAGTGCCATTTTTTTAAGATTTTGTCTACACGGGTAGTTTGATTTAAGATTTTGTGACGTCTAAGACTAAAATGTCTGAAAATCCAAGATAATTGTGTATGAGATCTCACAATCCACTCCCCTTAGGAGCCAGCGTCCTCGCTAGCACACTGTTGGGTATTTGTCTCAGATACCATTTTTTGTCACCCTCACTGTTTTAAAATGTGTCTGCTAGGAAGAGGTTTACAGGATCTTACATGCACGATTTATGTAGTATGTACAACGAGCAAAAAAGAAAAAAATTCATATATGTTAGATGTTCAAATTTTTTTTATAATTTTTAAAATAAAAGTAAACATAATAAAATAACTCGAAAATGGCACGAAAAAATTTTATTTTATTTAGTCTTTATAATTTTTAAATATTTAAATTTAGTTTATGTATTTTTAATATATCTTAAAATTAATTTTTTCCGTGGATTGAAATTATTTTTATTTAAGCAAAGCACGATGTAAATATATATATTTTTTTATCAAATTTTCGACTAAATATTTTTAGCAAAATATAATGAAATTAACTAAAATGTTATTTTTATTAAAATTATTATTTATAAAAAGAAAAACTAATTGGAAAATACGCTCCACTTGAAAATATATATGCTTGAGAATTTCAATTTCCTGCACAAAGCCCACGCTTTGAGTTCCTTGCCAAGCAAACGCTGTCCAAGTTCTTCCTTTTTTGTCTTTGATTTGTATGTAGTTTCACAATAATCGAAGCTCATACAATAATTTTGGTTGCTAATCTTCTCTGGTTACGTGCTTCCATTATTATACCTTCAAGATCTCCAATGGCAGACCCCCGCAACTTGTCTTGCTACAACTGCGGCAGCGTTGGGCTTACAGACGGTGGCGATGGCTTCTTCTACTGTCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGTGTTGCCGACGAGGATTTGATTTTAAGAGACCCTGGTGATGCCGGTGGCCCAATCTACTCGCAATCCCACACGCGCCGTCGTAATCCGGCGGTGTTGAAGGTAGAGCCTATATCTCAGTCTCAACCACAGAGCCTTTTCGGTACTAGTCAATCTGAGTTCTGGGAGAGCCTTCAATTAGAGGGAGACAACGATATGCAAAGGGATGATGCCATTGTGATGTCTAATGATGGTGTTGGGCCGATTGGTCCTGAGGATTTCGGGTCGGGTGGTGTGTTATCTGGAGCTCCGAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGATATGTAATGGGGTTGCAGTTGATGATGGAGCTTCAGTGCGAAGTTTTGGTGAAGGAATTCAATGCAAGCCCTGTAATCTGTGGATTGGCGGCGAGCATTTGGTTGAGGTTTGTGACTTCTACACAGGTTTTTGACGAGGATTGGGCCTTTGAGGCCGTTCAGGATTCCGAGAGCCAATGCCTAGGTTTGATCACTCATTACTTCCACTAATAGTTCCTATCAAATTTAAGTGCCCATGAATCATGTTGGTAAAACTGAAACCATTAGCTTTAGATTTCCGATTGGAACATATTCGTGGATGGGAGACTTTAAATGTTTGGATTCTGTGGATTCTGATAAATTCCTTGAAAACTTAACTCATTATTGTTATTACATTGTCTTTTTTGGCCTTTGATCTTGTTTGCATATTCAAATATCATAGTTCTAAGTGCATATAGCCATTCGTGATACACTTCTCCTCAGTTTCTTTGTAATGGGGCATGATTTTGTTTGAGATCTTACAATTTTGCAAGTAGGATAATTGCCTTATTTGTTCCTTTACGTACTGTTGGTTGAGTTTTCTTCATATATTTCAGTATGTTTGATTGTTTTAAATGGGTCTCTTAGTTTTTTTTATTACTTTTTGTCATCTTTCTTTTTCGATTTTAGTTGCAAACTGATTGTTCCTTCATTCAACAGATCCTGAAAACATTAGACCTGTTTCCAGTAGGCATAAAGATGAACCCCACAATTTGTATGGTCAGCGGGTAGTAGTTGTGTGGGTTCAATCTTTAAGAAAAAAGATACCATTATCTTGTACACTAGCTGTTTCCTTTTTGGCTTGCCATGTTGCTCGAGAAGCGATTTTACCAACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTGTTGACATTGGAGATCGCATTGGGCAAACGTCAAGGGCTTGTCCTATAAGTTTAAAGCATATGTATAGGCCCTCTCGAATTCCCTCACTGCAGAAGTTGGAATCATTGGCAGCATCGGTAGCTCATACCATAGGGCTCAACCTACCTCCAGTCAACTTTCATTCAATAGCACGTCGTTATCTCAACAAGCTGGCCCTTCCTGTTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTGTGGTTATCAACCAATGAGCTGAGGCTTCCCTCACGTGTTTGTGTAATGTCGATTCTAATTATAGCCATGAGAATTCTCTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCCGGTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGAGGCATTCAAGTCCTGCTAATAATTTCAGTAACGTGCAGGCTAATAGTGAAAATGGACCTGGATTTACTTCACATAATGTGGATAATCTGTCTGTCTCGGCTAAATTCTCGCATCTTCACATGCCTGAACTGACTGCTTCAGAGTTCCTTCACAAGATTGAAGCTCGGTATCACGAGATTGCTGAGACTTATGGTATGATTTAAGTTTTATTGTATTTTTAAAGTTAGGCCAACCAGAAGCTTTTTTCCTACCTGCTCACTCTATTTATTACTAAATTGTTATTTGCTGACACCAAAATTTTGTTGGCAGAATACTCTAAAAGCTTGCCAATCTATCTTCAGCACTGTAAGGATGTTGTCTTTGCTGGTTTAGAGTCTTTGTTTGAGGATCACGAGGAAGAAAGGTTGATTGAACAATTTTGGAAGTATTATCAGAATGAAAAGGTAGTGGCTATCATGCTGAAGTCTGGCCTTCTTCTTTTCTCTTGAGAATCAAATTCAATTTCGCTGCTGATTGTGATTCTTGTGAAATATATAATGAATTTCTTTTACTTTTTCTTTCCTTTTGTCACTAGGATGAGATTTTGATCTTTAGGGTATATAGTGAGAAAACAAACAAAGAAGGGAAAGAGGAGACTAGCCGGGACGTTTTATACTAATGAGGCTATCTCGAATCACTGGATGAGGCTTTTTTTTTTTTTTTTTTATCGCTCTTACTTACTATCGTGAACCAACCGGTTACTGATAGAGGCTTCTTAGCTAAATTTTCATAGCCTAAGAGTGATTCCAAAAGCTAATGTTCGTCCTATTACTCATCTTAGGGTTAAATACTCTTAGCAAACTTTTAGGAGTCATGTGGTGTTGAGACTTTGGTATTTGCAAGTGAACCAACCCCCTTTTTCAACCCTATAAAGACATGAAAAGCCGGAATGGCACATAAATCTTTCTCTAGAGAAGAACCCCCTTTTAATACTCTTAGTTGCTACCGTGACACTTTGGGTAGGATTAGCCAAGTACATCATTTCATCCCTAAAGAAACACCTTCAAGAATTGTGGTTCTTATGGGCGTTGAGGGCATTGGTTTGTGGTAAGCCTAGAGATTTGAGTGGGAGGATGTAGAAAGCGTAGATTTGATTAATCTGAGTTGAGTTTGAGGTGCAAGTTTAGGAAGCTTGTTCTTGGGGTGAGAGGAATAATAGATTCTTTCTAGGGGATACACGGATTCATGCCACTCAAACCCAAACCCTCACCTGAAATATGCTCTTAATGTATTAAAAGTTCTAGCATTAAAACGGTAGTTAAAGATGAATTGATGTTTCTTTATGATGGAGGAAAGAAATTCAATTCAGAAGTGTAAGTTGTTGTGGCTATGCAATAATGAGTTAATTTTTTACATGTCTCACATGCAATGACAGAGAACGTCTCTTCAATTGTTGCCAGTTCAACTTACGTTTATAACTATCACCTGTACTTAAGGTTATTCCTTTGGTAGGATGGCTTCAGCCCCCCTAACAGATCTTAACTATCACCTGTAGTTATTTATGAGATTTAGGAATTTATGTAATTGGAATGAATCAAAGTTCGTAGCATATGGAGTCTAACAATTTGTGGGTGAGAGATTTGAACTTCTGACCTCTTACTCGAGAGTACATGTTTTATGCTAGTTGAGTTATCCTCATGTTGGTGACATCTATTTACTTAACACTTTTAGATAAATGTATGTTTATCGTTGTTTTCGTAATGGTTATATGTAACAGCCTAAGCCACCGCAGCTAGCAGATATTGTCATCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCATCTCCCAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTTCATTCTCCTCTTTCACTGATGTGGGATCTCAGAATCCACCTCTTTTGGGCCTATCGTTTTCGTTGGCACTCGTTCTTTTCTCCAATCGATTGTGGAACCCCCTAATCCACTCTCCTTCGAGACCCAGCATTCTTGCTAGCACTCGTTCGGCGTCTGGCTCTAATACCATTTGTAACAACCCAATTCCACTGCTAGCAAATATTGTCCTATTTGGGCTTTCTCTTTCGGGCTTTCCCTCAAGGTTTCTAAAACGCTCTGCTAGGGAGAGGTTTCCATACCCTTATAAAAAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACATTATAACTTGGTCATTTTTCTTCTCGATGTTCTTTGGAATTAGTGAAAGGTTGCTGCTCAATGTAGAGTTCTTATGAGAAAATTGTGACTTATGCTCTAATCTAACTTTGCATTAGCACCTTCATTTTGATGTTTAAACTTGAGTTTGAGAAGTAAGATGTAGAAGTGTTGCTAGACTTGAGCTACAATAGGTTATCCAAGTAGGTCAGATGAAAATAGTAAAGAGACTATTGCTGAATGAGTTCAAATTTTATAGTGGCGACCTAGATATTAATATCCTACGAATCATCCGACAATTAAACATTATAGGGGTCGAGCAATTGTCTCGTGAAATTTGTGAATCTGTGCATAAGTATCGGAAAAAGTCAAGTTAGAACTTATAGTTCTTCTTTGCAATATCACTTGCTTTTGCTGCTATGCCACAGGGATTTCATGTCTGCTAACCAAATTTATGTATCAGTGTTTATTTGGAAAGCATAAATCCTAACCACTGAAATGAAATTGTTACAGGATCAAGAACAAACAGAAGATGTGGATCAAAATGCAGCTTCCAATCAAAAGAGATTGAGGGAAGCTCCGAATGATCGATCATCCAACAAAGACAAGAAACGCAGGAGCGAAGACCGTATAAGTGGCGAATCATCCGATAACAGAACTGAGTCGAATAATTCTCAGCAAAGTCATTCATCAAAAAGTTCCGAAAATGTAGATGATGAACTATCCTCTGAAGACAAAGCTTCAACACCAACTTCCAAAGACGAAGCAATCAGACGACTGAAACTCGATATGGAAGAAAATAGATTCTGCTACATTCCTCCAAGGGTTTACCCGAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGACGAAGGTGCGCTAACTTACGCTGCTCATGCCGATTACTACTTATTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTAGTACAAGGATCATGCACATTGGTGTGCTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAATCTAGAATCCATCACTCCCTTCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATGTTATGCCTGATCATGCCACGCTTGACTCTATTGATCTCTCAGATTTGAATATTTAAGTGATCAGAGATATATTCGAACG

mRNA sequence

TCTCAACTAAAACGATTCTTCGCCAAATATAGAATTAAGGATAAGAATCGCTGAAAGCAACCCTTCAATACAAATCACCATTTCTATAAATTACATCGACTGTGTGCGAGAGCAATGGTTAGTGGCTGCGGCCATTTTTGGAGCTTACGTCAATTTTAATGGCTTCTCTCTGGAACCCACCTGTTGCCTCCTTCTCCCCAATCAGACCCACCTTGAATCCATCAAAAATGGCGTCCAATTTCAACCATACCCTTCTTCGCAGAGGCAACGATACTGGCATTGGCGATGGCAAAGGCGTCTCGTCTTCTCTTTCGATGGCTACTGGTTGGAGCTCTGATGGTGGCGATAAGAGCACTAGGAAGCTTCCTGTTCTGCTGTTTGATATCATGGGTACCATTGTTCGTGATCCATTCTATGAAGATGTTCCCGCCTTTTTCAGAATGCCCATGGAGGAACTACTTGAACTCAAACACCCAACCGTGTGGCTAGAATTTGAGAAGGGTTTGATTGATGAGGCAGAGCTGGAAAAAAAATTCTTTAAAGATGGGCGAGCTGTTGATTTTGAAGGCCTCAAAAACTGTATGATAAGGGGTTACTCCTACCTAGAAGGCATTGAAGAATTGCTAAATGCACTAAAAGAGAAAAACTATGAAATGCATGCCTTCACAAACTATCCTATTTGGTACGAAATGATCGAGGAGAAGTTGAAAATCTCGAGATATCTATCGTGGACCTTCTGCTCTTGTAAAAACGGAAAGAGGAAGCCGGATCCTGATTTCTACTTGGAAGCCCTGAGACATCTTGAAGTTGAGCCAGCTAGCTGTATTTTCATTGATGACAGAAAGAAAAACGTAGAAGCAGCGAAAGAAGTCGGCATTGTAGGCTTACATTTCAGAAGTGCAGATTTACTACTACAGGATCTCTGTCGTCTGGGACTCGATATTTCACCCGATATTCATCGCTTGAACTCGGCAGCATCGACATGAACGTACCGGACACGTTGCTGAGATCTCCAATGGCAGACCCCCGCAACTTGTCTTGCTACAACTGCGGCAGCGTTGGGCTTACAGACGGTGGCGATGGCTTCTTCTACTGTCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGTGTTGCCGACGAGGATTTGATTTTAAGAGACCCTGGTGATGCCGGTGGCCCAATCTACTCGCAATCCCACACGCGCCGTCGTAATCCGGCGGTGTTGAAGGTAGAGCCTATATCTCAGTCTCAACCACAGAGCCTTTTCGGTACTAGTCAATCTGAGTTCTGGGAGAGCCTTCAATTAGAGGGAGACAACGATATGCAAAGGGATGATGCCATTGTGATGTCTAATGATGGTGTTGGGCCGATTGGTCCTGAGGATTTCGGGTCGGGTGGTGTGTTATCTGGAGCTCCGAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGATATGTAATGGGGTTGCAGTTGATGATGGAGCTTCAGTGCGAAGTTTTGGTGAAGGAATTCAATGCAAGCCCTGTAATCTGTGGATTGGCGGCGAGCATTTGGTTGAGGTTTGTGACTTCTACACAGGTTTTTGACGAGGATTGGGCCTTTGAGGCCGTTCAGGATTCCGAGAGCCAATGCCTAGATCCTGAAAACATTAGACCTGTTTCCAGTAGGCATAAAGATGAACCCCACAATTTGTATGGTCAGCGGGTAGTAGTTGTGTGGGTTCAATCTTTAAGAAAAAAGATACCATTATCTTGTACACTAGCTGTTTCCTTTTTGGCTTGCCATGTTGCTCGAGAAGCGATTTTACCAACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTGTTGACATTGGAGATCGCATTGGGCAAACGTCAAGGGCTTGTCCTATAAGTTTAAAGCATATGTATAGGCCCTCTCGAATTCCCTCACTGCAGAAGTTGGAATCATTGGCAGCATCGGTAGCTCATACCATAGGGCTCAACCTACCTCCAGTCAACTTTCATTCAATAGCACGTCGTTATCTCAACAAGCTGGCCCTTCCTGTTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTGTGGTTATCAACCAATGAGCTGAGGCTTCCCTCACGTGTTTGTGTAATGTCGATTCTAATTATAGCCATGAGAATTCTCTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCCGGTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGAGGCATTCAAGTCCTGCTAATAATTTCAGTAACGTGCAGGCTAATAGTGAAAATGGACCTGGATTTACTTCACATAATGTGGATAATCTGTCTGTCTCGGCTAAATTCTCGCATCTTCACATGCCTGAACTGACTGCTTCAGAGTTCCTTCACAAGATTGAAGCTCGGTATCACGAGATTGCTGAGACTTATGAATACTCTAAAAGCTTGCCAATCTATCTTCAGCACTGTAAGGATGTTGTCTTTGCTGGTTTAGAGTCTTTGTTTGAGGATCACGAGGAAGAAAGGTTGATTGAACAATTTTGGAAGTATTATCAGAATGAAAAGGATCAAGAACAAACAGAAGATGTGGATCAAAATGCAGCTTCCAATCAAAAGAGATTGAGGGAAGCTCCGAATGATCGATCATCCAACAAAGACAAGAAACGCAGGAGCGAAGACCGTATAAGTGGCGAATCATCCGATAACAGAACTGAGTCGAATAATTCTCAGCAAAGTCATTCATCAAAAAGTTCCGAAAATGTAGATGATGAACTATCCTCTGAAGACAAAGCTTCAACACCAACTTCCAAAGACGAAGCAATCAGACGACTGAAACTCGATATGGAAGAAAATAGATTCTGCTACATTCCTCCAAGGGTTTACCCGAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGACGAAGGTGCGCTAACTTACGCTGCTCATGCCGATTACTACTTATTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTAGTACAAGGATCATGCACATTGGTGTGCTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAATCTAGAATCCATCACTCCCTTCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATGTTATGCCTGATCATGCCACGCTTGACTCTATTGATCTCTCAGATTTGAATATTTAAGTGATCAGAGATATATTCGAACG

Coding sequence (CDS)

ATGAACGTACCGGACACGTTGCTGAGATCTCCAATGGCAGACCCCCGCAACTTGTCTTGCTACAACTGCGGCAGCGTTGGGCTTACAGACGGTGGCGATGGCTTCTTCTACTGTCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGTGTTGCCGACGAGGATTTGATTTTAAGAGACCCTGGTGATGCCGGTGGCCCAATCTACTCGCAATCCCACACGCGCCGTCGTAATCCGGCGGTGTTGAAGGTAGAGCCTATATCTCAGTCTCAACCACAGAGCCTTTTCGGTACTAGTCAATCTGAGTTCTGGGAGAGCCTTCAATTAGAGGGAGACAACGATATGCAAAGGGATGATGCCATTGTGATGTCTAATGATGGTGTTGGGCCGATTGGTCCTGAGGATTTCGGGTCGGGTGGTGTGTTATCTGGAGCTCCGAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGATATGTAATGGGGTTGCAGTTGATGATGGAGCTTCAGTGCGAAGTTTTGGTGAAGGAATTCAATGCAAGCCCTGTAATCTGTGGATTGGCGGCGAGCATTTGGTTGAGGTTTGTGACTTCTACACAGGTTTTTGACGAGGATTGGGCCTTTGAGGCCGTTCAGGATTCCGAGAGCCAATGCCTAGATCCTGAAAACATTAGACCTGTTTCCAGTAGGCATAAAGATGAACCCCACAATTTGTATGGTCAGCGGGTAGTAGTTGTGTGGGTTCAATCTTTAAGAAAAAAGATACCATTATCTTGTACACTAGCTGTTTCCTTTTTGGCTTGCCATGTTGCTCGAGAAGCGATTTTACCAACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTGTTGACATTGGAGATCGCATTGGGCAAACGTCAAGGGCTTGTCCTATAAGTTTAAAGCATATGTATAGGCCCTCTCGAATTCCCTCACTGCAGAAGTTGGAATCATTGGCAGCATCGGTAGCTCATACCATAGGGCTCAACCTACCTCCAGTCAACTTTCATTCAATAGCACGTCGTTATCTCAACAAGCTGGCCCTTCCTGTTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTGTGGTTATCAACCAATGAGCTGAGGCTTCCCTCACGTGTTTGTGTAATGTCGATTCTAATTATAGCCATGAGAATTCTCTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCCGGTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGAGGCATTCAAGTCCTGCTAATAATTTCAGTAACGTGCAGGCTAATAGTGAAAATGGACCTGGATTTACTTCACATAATGTGGATAATCTGTCTGTCTCGGCTAAATTCTCGCATCTTCACATGCCTGAACTGACTGCTTCAGAGTTCCTTCACAAGATTGAAGCTCGGTATCACGAGATTGCTGAGACTTATGAATACTCTAAAAGCTTGCCAATCTATCTTCAGCACTGTAAGGATGTTGTCTTTGCTGGTTTAGAGTCTTTGTTTGAGGATCACGAGGAAGAAAGGTTGATTGAACAATTTTGGAAGTATTATCAGAATGAAAAGGATCAAGAACAAACAGAAGATGTGGATCAAAATGCAGCTTCCAATCAAAAGAGATTGAGGGAAGCTCCGAATGATCGATCATCCAACAAAGACAAGAAACGCAGGAGCGAAGACCGTATAAGTGGCGAATCATCCGATAACAGAACTGAGTCGAATAATTCTCAGCAAAGTCATTCATCAAAAAGTTCCGAAAATGTAGATGATGAACTATCCTCTGAAGACAAAGCTTCAACACCAACTTCCAAAGACGAAGCAATCAGACGACTGAAACTCGATATGGAAGAAAATAGATTCTGCTACATTCCTCCAAGGGTTTACCCGAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGACGAAGGTGCGCTAACTTACGCTGCTCATGCCGATTACTACTTATTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTAGTACAAGGATCATGCACATTGGTGTGCTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAATCTAGAATCCATCACTCCCTTCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATGTTATGCCTGATCATGCCACGCTTGACTCTATTGATCTCTCAGATTTGAATATTTAA

Protein sequence

MNVPDTLLRSPMADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIYSQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVGPIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENVDDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSDVMPDHATLDSIDLSDLNI
Homology
[Close]
BLAST of CmaCh12G009490 vs. ExPASy Swiss-Prot
Match: Q5XVF0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabidopsis thaliana OX=3702 GN=MEE12 PE=1 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.5e-125
Identity = 294/731 (40.22%), Postives = 409/731 (55.95%), Query Frame = 0 

Query: 20  CYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIYSQSHTRRR 79
           C  C +    +  DG++YC +CG Q +++I TGV D DLI  + G   G +Y+  H RR 
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLI-GEGGGTQGALYNPKH-RRT 62

Query: 80  NPAVLKVEPISQSQPQSLFGTSQ-SEFWESLQLE-GDNDMQRD-----DAIVMSNDGVGP 139
            P     +PI+ SQP+    TS+ S+F    + E G+ ++ R+     D+ V       P
Sbjct: 63  EP-----QPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE----P 122

Query: 140 IGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAAS 199
             P DF +  +     S+E Y DE R RYV    +M+  QC+ LV +FN +P+I GL   
Sbjct: 123 TEPVDFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGP 182

Query: 200 IWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVS--SRHKDEPHNLYGQRVVVVWV 259
           I LR+V  + V+ +DWA  A++DSE Q  D E ++      RHK EP N+ G+R V +W 
Sbjct: 183 ISLRYVALSGVYHKDWANNAIRDSEHQSEDGE-VKDAKRLKRHKAEPRNIDGKRAVTIWF 242

Query: 260 QSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRA 319
             L+K +PLS +L +SFLACH A   +LPTDI++W+ EGKLPY + F+DI +++G+ S A
Sbjct: 243 GILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAA 302

Query: 320 CPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILP 379
           CP+ +  M RP ++ S Q LE+ A+ +A TIGL LPPVNF+ IA  Y+ +L++P DKIL 
Sbjct: 303 CPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILD 362

Query: 380 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASS 439
            A  I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LYN++G G WE+SL    AS 
Sbjct: 363 LARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNAS- 422

Query: 440 FPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIE 499
                               +SE   G                     E    E L  +E
Sbjct: 423 ------------------DGDSETNSGTAE---------------KATEFDTQELLKNLE 482

Query: 500 ARYHEI-AETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQE- 559
           A+YHE+ AET E  K L  YL   K+  FAGLE    D +  R+++  W  Y  ++D E 
Sbjct: 483 AKYHEVAAETLESEKDLVSYLSLGKNEFFAGLEEDSPD-DTYRIVDNLWNGYPKDEDIEC 542

Query: 560 ---QTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSS 619
              +  D D + + NQ  L                          D+R    N+  S SS
Sbjct: 543 LPKRGRDWDDDVSLNQLSL-------------------------YDSRFSDGNNPCSSSS 602

Query: 620 KSSENVD---DELSSEDKASTPTS--KDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHY 679
           + +E+V    D  SSE + S+     K+ AI+RL  DM ++ FCYIPPRV  KR  YL Y
Sbjct: 603 RRNESVSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQY 656

Query: 680 SRKIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLT 732
            RK ++GAL YAAHADYY+LLR CA+ A++  R MH GVLS E+RL+W+E RI   LHLT
Sbjct: 663 VRKKEDGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLT 656

[Close]
BLAST of CmaCh12G009490 vs. ExPASy Swiss-Prot
Match: B8AX23 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19584 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-98
Identity = 228/594 (38.38%), Postives = 326/594 (54.88%), Query Frame = 0 

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           P  P DF +G    G P  E+ A  VR RYV GLQ++++ Q E LV+      +   LA 
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYG------QRV 251
           +IWLR+V +++VFDE W  + +  + S       +    S  KD+   L G         
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAAS-------VEEGHSASKDKQSELEGDAQKSQSSY 225

Query: 252 VVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG 311
             ++++SLR  +P+  TLAV FLACHVARE ILPTDI +W++EGKLPY AAF  +   +G
Sbjct: 226 EFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLG 285

Query: 312 QTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPV 371
            +   CP+S + ++RP+R+    +LE+ A S+A  IGL LP VNF+ IA+R+L +L+LP+
Sbjct: 286 SSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPI 345

Query: 372 DKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEK-SLS 431
           +KILPHACRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + +
Sbjct: 346 EKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQT 405

Query: 432 GNCASSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASE 491
            N   S P     HS        ++ +S N                        E  A E
Sbjct: 406 ENAVGSDPEASAPHS--------IEPDSNNS----------------------EEFDARE 465

Query: 492 FLHKIEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 551
            L  + A Y +I   ++YSK +  YL++CKDVVF G+       EEE LI+ FW  Y+  
Sbjct: 466 LLCTLAASYDKIDVGHDYSKEVHSYLKYCKDVVFTGMTFSL---EEEHLIDIFWDMYKG- 525

Query: 552 KDQEQTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHS 611
              ++   +D+NA   Q++L      R++N   KR  + R +                  
Sbjct: 526 ---KEVMLLDENAKLCQEKL------RTTNGVNKRCRDGRFADTKC-------------- 585

Query: 612 SKSSENVDDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 671
                            STP   + A++ +K  MEEN FCY+ PR      GYL Y+R+ 
Sbjct: 586 ----------------CSTPLG-NCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRE 616

Query: 672 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLH 719
             G+L Y AHADYY+LLR  A+ A+V  R++H  VL LE+RL W+E R+  SL+
Sbjct: 646 SSGSLIYVAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616

[Close]
BLAST of CmaCh12G009490 vs. ExPASy Swiss-Prot
Match: Q5W770 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0352700 PE=3 SV=2)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-98
Identity = 228/594 (38.38%), Postives = 326/594 (54.88%), Query Frame = 0 

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           P  P DF +G    G P  E+ A  VR RYV GLQ++++ Q E LV+      +   LA 
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYG------QRV 251
           +IWLR+V +++VFDE W  + +  + S       +    S  KD+   L G         
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAAS-------VEEGHSASKDKQSELEGDAQKSQSSY 225

Query: 252 VVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG 311
             ++++SLR  +P+  TLAV FLACHVARE ILPTDI +W++EGKLPY AAF  +   +G
Sbjct: 226 EFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLG 285

Query: 312 QTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPV 371
            +   CP+S + ++RP+R+    +LE+ A S+A  IGL LP VNF+ IA+R+L +L+LP+
Sbjct: 286 SSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPI 345

Query: 372 DKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEK-SLS 431
           +KILPHACRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + +
Sbjct: 346 EKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQT 405

Query: 432 GNCASSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASE 491
            N   S P     HS        ++ +S N                        E  A E
Sbjct: 406 ENAVGSDPEASAPHS--------IEPDSNNS----------------------EEFDARE 465

Query: 492 FLHKIEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 551
            L  + A Y +I   ++YSK +  YL++CKDVVF G+       EEE LI+ FW  Y+  
Sbjct: 466 LLCTLAASYDKINVGHDYSKEVHSYLKYCKDVVFTGMTFSL---EEEHLIDIFWDMYKG- 525

Query: 552 KDQEQTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHS 611
              ++   +D+NA   Q++L      R++N   KR  + R +                  
Sbjct: 526 ---KEVMLLDENAKLCQEKL------RTTNGVNKRCRDGRFADTKC-------------- 585

Query: 612 SKSSENVDDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 671
                            STP   + A++ +K  MEEN FCY+ PR      GYL Y+R+ 
Sbjct: 586 ----------------CSTPLG-NCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRE 616

Query: 672 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLH 719
             G+L Y AHADYY+LLR  A+ A+V  R++H  VL LE+RL W+E R+  SL+
Sbjct: 646 SSGSLIYVAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616

[Close]
BLAST of CmaCh12G009490 vs. ExPASy TrEMBL
Match: A0A6J1HNT6 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita maxima OX=3661 GN=LOC111465368 PE=3 SV=1)

HSP 1 Score: 1461.0 bits (3781), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 731
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 720

Query: 732 VMPDHATLDSIDLSDLNI 750
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]
BLAST of CmaCh12G009490 vs. ExPASy TrEMBL
Match: A0A6J1FAY0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita moschata OX=3662 GN=LOC111443985 PE=3 SV=1)

HSP 1 Score: 1436.4 bits (3717), Expect = 0.0e+00
Identity = 724/738 (98.10%), Postives = 733/738 (99.32%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDND+QRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDIQRDDTIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG+TSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGKTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQKRHSSPAN+FSNVQANSENGPGFTSHNVDNLSVSAK+SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYH+IAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 731
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRI+HSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 732 VMPDHATLDSIDLSDLNI 750
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]
BLAST of CmaCh12G009490 vs. ExPASy TrEMBL
Match: A0A6J1D8G5 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordica charantia OX=3673 GN=LOC111018221 PE=3 SV=1)

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 619/741 (83.54%), Postives = 670/741 (90.42%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRR PAVLKVEP+SQSQPQ+LFG + S+FW+SL L+     +  DA+ + +DGVG
Sbjct: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           P GPEDFGSGGVLSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IA RYL+KL+LPV+KIL H
Sbjct: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQK HSSPA+NFSN QA+ ENG GFTSHNVDNLS S +  +LH PELT +EFL KIEA
Sbjct: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEK-DQEQT 551
           RY+EIAETYEYS+ LP YLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+K D EQT
Sbjct: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKEDSEQT 540

Query: 552 EDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRT-ESNNSQQSHSSKSSE 611
           EDVDQNAASNQKRLRE   DR SN+ KK R E+ IS ESSDN+T  SNNSQQSHSSKSSE
Sbjct: 541 EDVDQNAASNQKRLREGSADRLSNESKKPRGEEGISRESSDNKTSNSNNSQQSHSSKSSE 600

Query: 612 NVD-DELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGA 671
             D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GA
Sbjct: 601 GGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGA 660

Query: 672 LTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEF 731
           LTYAAHADYY+LLRACARAAQ+  RIMHIGVLSLEKRLSWLE+RIHHSLHLTPS VSCEF
Sbjct: 661 LTYAAHADYYILLRACARAAQIDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEF 720

Query: 732 CSDVMPDHATLDSIDLSDLNI 750
           CSDV+P++AT+DSI LSDLNI
Sbjct: 721 CSDVVPENATVDSIGLSDLNI 736

[Close]
BLAST of CmaCh12G009490 vs. ExPASy TrEMBL
Match: A0A1S3B4G3 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo OX=3656 GN=LOC103485898 PE=3 SV=1)

HSP 1 Score: 1151.3 bits (2977), Expect = 0.0e+00
Identity = 606/747 (81.12%), Postives = 656/747 (87.82%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADP NLSCYNCGS+GLTDG DGFFYCLQCGSQADDIIDTGVA+EDL LRD G +GGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGD---NDMQRDDAIVMSND 131
           SQSHTRRRNP VLKVEP+SQSQP  LFGTSQSEFW+SL L+ D   N  Q DD IVM ND
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQP--LFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 120

Query: 132 GVGPIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICG 191
           GVGP GPEDFGSG VLSG PSFEEYADEVRMRYVMGLQL+MELQCEVLVKEF A+P+ICG
Sbjct: 121 GVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICG 180

Query: 192 LAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVV 251
           LAASIWLRFVT+T+VFDEDWAF+ VQ+SESQCLD E IR V S HKDEPHN YGQRVVV+
Sbjct: 181 LAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVL 240

Query: 252 WVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTS 311
           WV+SLRKKIPL CTLAVSFLACHVAREAILPTDI+KWSLEGKLPY+AAFVDI  RIG+TS
Sbjct: 241 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTS 300

Query: 312 RACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKI 371
           RACPIS K M+RPSRI SLQKLESLAAS+AHTIGLNLPPVNFHSIA RYLNKLALPVDKI
Sbjct: 301 RACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 360

Query: 372 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCA 431
           LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LYNLHGFGEWEKSLS NCA
Sbjct: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCA 420

Query: 432 SSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHK 491
           S FPPNQK HSSPANNFSN+QA+SEN PGFTSH++DN SVS +      P LT +EFL K
Sbjct: 421 SYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSPE-----NPHLTTTEFLRK 480

Query: 492 IEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLF-EDHEEERLIEQFWKYYQNEKDQ 551
           IEARYHEIAETYEYSK LP YLQ+CKDVVFAG ESLF +DHEE+++IE+ W YYQNEKD 
Sbjct: 481 IEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQNEKDH 540

Query: 552 EQTEDVDQNAASNQKRLREAPNDRSSNKDKK-RRSEDRISGESSDNRTESNNSQQSHSSK 611
           +QTEDVDQN ASN KRLRE  NDR S++ KK +  ED ISGESS+NRT S +S+QSHSSK
Sbjct: 541 DQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRTGSIDSRQSHSSK 600

Query: 612 SSENV---DDELSSEDK-ASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSR 671
           S EN    DDE SSEDK AS+ TS +EAIR+LKLDMEE RFCYIPPR  PKRFGYLHYSR
Sbjct: 601 SLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYLHYSR 660

Query: 672 KIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPS 731
           KIDEGALTYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE RIH +L LTPS
Sbjct: 661 KIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLRLTPS 720

Query: 732 SVSCEFCSDVMPDHATLDSIDLSDLNI 750
           SV+CEFCSDV P+H  +DS+ LSDL+I
Sbjct: 721 SVTCEFCSDV-PNH--IDSVGLSDLDI 737

[Close]
BLAST of CmaCh12G009490 vs. ExPASy TrEMBL
Match: A0A5D3C954 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001970 PE=3 SV=1)

HSP 1 Score: 1151.3 bits (2977), Expect = 0.0e+00
Identity = 606/747 (81.12%), Postives = 656/747 (87.82%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADP NLSCYNCGS+GLTDG DGFFYCLQCGSQADDIIDTGVA+EDL LRD G +GGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGD---NDMQRDDAIVMSND 131
           SQSHTRRRNP VLKVEP+SQSQP  LFGTSQSEFW+SL L+ D   N  Q DD IVM ND
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQP--LFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 120

Query: 132 GVGPIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICG 191
           GVGP GPEDFGSG VLSG PSFEEYADEVRMRYVMGLQL+MELQCEVLVKEF A+P+ICG
Sbjct: 121 GVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICG 180

Query: 192 LAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVV 251
           LAASIWLRFVT+T+VFDEDWAF+ VQ+SESQCLD E IR V S HKDEPHN YGQRVVV+
Sbjct: 181 LAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVL 240

Query: 252 WVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTS 311
           WV+SLRKKIPL CTLAVSFLACHVAREAILPTDI+KWSLEGKLPY+AAFVDI  RIG+TS
Sbjct: 241 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTS 300

Query: 312 RACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKI 371
           RACPIS K M+RPSRI SLQKLESLAAS+AHTIGLNLPPVNFHSIA RYLNKLALPVDKI
Sbjct: 301 RACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 360

Query: 372 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCA 431
           LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LYNLHGFGEWEKSLS NCA
Sbjct: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCA 420

Query: 432 SSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHK 491
           S FPPNQK HSSPANNFSN+QA+SEN PGFTSH++DN SVS +      P LT +EFL K
Sbjct: 421 SYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSPE-----NPHLTTTEFLRK 480

Query: 492 IEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLF-EDHEEERLIEQFWKYYQNEKDQ 551
           IEARYHEIAETYEYSK LP YLQ+CKDVVFAG ESLF +DHEE+++IE+ W YYQNEKD 
Sbjct: 481 IEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQNEKDH 540

Query: 552 EQTEDVDQNAASNQKRLREAPNDRSSNKDKK-RRSEDRISGESSDNRTESNNSQQSHSSK 611
           +QTEDVDQN ASN KRLRE  NDR S++ KK +  ED ISGESS+NRT S +S+QSHSSK
Sbjct: 541 DQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRTGSIDSRQSHSSK 600

Query: 612 SSENV---DDELSSEDK-ASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSR 671
           S EN    DDE SSEDK AS+ TS +EAIR+LKLDMEE RFCYIPPR  PKRFGYLHYSR
Sbjct: 601 SLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYLHYSR 660

Query: 672 KIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPS 731
           KIDEGALTYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE RIH +L LTPS
Sbjct: 661 KIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLRLTPS 720

Query: 732 SVSCEFCSDVMPDHATLDSIDLSDLNI 750
           SV+CEFCSDV P+H  +DS+ LSDL+I
Sbjct: 721 SVTCEFCSDV-PNH--IDSVGLSDLDI 737

[Close]
BLAST of CmaCh12G009490 vs. NCBI nr
Match: XP_022965475.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita maxima])

HSP 1 Score: 1461.0 bits (3781), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 731
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 720

Query: 732 VMPDHATLDSIDLSDLNI 750
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]
BLAST of CmaCh12G009490 vs. NCBI nr
Match: XP_023536820.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1444.1 bits (3737), Expect = 0.0e+00
Identity = 729/738 (98.78%), Postives = 733/738 (99.32%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAK+SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYHEIAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 731
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRI+HSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 732 VMPDHATLDSIDLSDLNI 750
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]
BLAST of CmaCh12G009490 vs. NCBI nr
Match: XP_022937641.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita moschata])

HSP 1 Score: 1436.4 bits (3717), Expect = 0.0e+00
Identity = 724/738 (98.10%), Postives = 733/738 (99.32%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDND+QRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDIQRDDTIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG+TSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGKTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQKRHSSPAN+FSNVQANSENGPGFTSHNVDNLSVSAK+SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYH+IAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 731
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRI+HSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 732 VMPDHATLDSIDLSDLNI 750
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]
BLAST of CmaCh12G009490 vs. NCBI nr
Match: KAG7020963.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 724/738 (98.10%), Postives = 730/738 (98.92%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDNDMQRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQK+HSSPANNFSNVQANSENGPGFTSHNVDN SVSAK SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYHEIAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 731
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRI+HSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 732 VMPDHATLDSIDLSDLNI 750
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]
BLAST of CmaCh12G009490 vs. NCBI nr
Match: KAG6586140.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1350.5 bits (3494), Expect = 0.0e+00
Identity = 683/696 (98.13%), Postives = 688/696 (98.85%), Query Frame = 0 

Query: 12  MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 71
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 72  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 131
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDNDMQRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 132 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 191
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 192 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 251
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 252 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 311
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 312 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 371
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 372 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 431
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 432 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 491
           PPNQK+HSSPANNFSNVQANSENGPGFTSHNVDN SVSAK SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480

Query: 492 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 551
           RYHEIAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 552 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 611
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 612 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 671
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 672 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLS 708
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLS
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLS 696

[Close]
BLAST of CmaCh12G009490 vs. TAIR 10
Match: AT2G02955.1 (maternal effect embryo arrest 12 )

HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-126
Identity = 294/731 (40.22%), Postives = 409/731 (55.95%), Query Frame = 0 

Query: 20  CYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIYSQSHTRRR 79
           C  C +    +  DG++YC +CG Q +++I TGV D DLI  + G   G +Y+  H RR 
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLI-GEGGGTQGALYNPKH-RRT 62

Query: 80  NPAVLKVEPISQSQPQSLFGTSQ-SEFWESLQLE-GDNDMQRD-----DAIVMSNDGVGP 139
            P     +PI+ SQP+    TS+ S+F    + E G+ ++ R+     D+ V       P
Sbjct: 63  EP-----QPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE----P 122

Query: 140 IGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAAS 199
             P DF +  +     S+E Y DE R RYV    +M+  QC+ LV +FN +P+I GL   
Sbjct: 123 TEPVDFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGP 182

Query: 200 IWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVS--SRHKDEPHNLYGQRVVVVWV 259
           I LR+V  + V+ +DWA  A++DSE Q  D E ++      RHK EP N+ G+R V +W 
Sbjct: 183 ISLRYVALSGVYHKDWANNAIRDSEHQSEDGE-VKDAKRLKRHKAEPRNIDGKRAVTIWF 242

Query: 260 QSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRA 319
             L+K +PLS +L +SFLACH A   +LPTDI++W+ EGKLPY + F+DI +++G+ S A
Sbjct: 243 GILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAA 302

Query: 320 CPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILP 379
           CP+ +  M RP ++ S Q LE+ A+ +A TIGL LPPVNF+ IA  Y+ +L++P DKIL 
Sbjct: 303 CPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILD 362

Query: 380 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASS 439
            A  I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LYN++G G WE+SL    AS 
Sbjct: 363 LARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNAS- 422

Query: 440 FPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIE 499
                               +SE   G                     E    E L  +E
Sbjct: 423 ------------------DGDSETNSGTAE---------------KATEFDTQELLKNLE 482

Query: 500 ARYHEI-AETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQE- 559
           A+YHE+ AET E  K L  YL   K+  FAGLE    D +  R+++  W  Y  ++D E 
Sbjct: 483 AKYHEVAAETLESEKDLVSYLSLGKNEFFAGLEEDSPD-DTYRIVDNLWNGYPKDEDIEC 542

Query: 560 ---QTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSS 619
              +  D D + + NQ  L                          D+R    N+  S SS
Sbjct: 543 LPKRGRDWDDDVSLNQLSL-------------------------YDSRFSDGNNPCSSSS 602

Query: 620 KSSENVD---DELSSEDKASTPTS--KDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHY 679
           + +E+V    D  SSE + S+     K+ AI+RL  DM ++ FCYIPPRV  KR  YL Y
Sbjct: 603 RRNESVSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQY 656

Query: 680 SRKIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLT 732
            RK ++GAL YAAHADYY+LLR CA+ A++  R MH GVLS E+RL+W+E RI   LHLT
Sbjct: 663 VRKKEDGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLT 656

The following BLAST results are available for this feature:
BLAST of CmaCh12G009490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5XVF01.5e-12540.22TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabido... [more]
B8AX231.2e-9838.38TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s... [more]
Q5W7701.2e-9838.38TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s... [more]
BLAST of CmaCh12G009490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HNT60.0e+00100.00TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi... [more]
A0A6J1FAY00.0e+0098.10TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi... [more]
A0A6J1D8G50.0e+0083.54TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordi... [more]
A0A1S3B4G30.0e+0081.12TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis... [more]
A0A5D3C9540.0e+0081.12TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis... [more]
BLAST of CmaCh12G009490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022965475.10.0e+00100.00TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... [more]
XP_023536820.10.0e+0098.78TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... [more]
XP_022937641.10.0e+0098.10TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... [more]
KAG7020963.10.0e+0098.10TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... [more]
KAG6586140.10.0e+0098.13TATA box-binding protein-associated factor RNA polymerase I subunit B, partial [... [more]
BLAST of CmaCh12G009490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G02955.11.1e-12640.22maternal effect embryo arrest 12 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 548..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..590
IPR033599RNA polymerase I transcription initiation factor TAF1B/Rrn7PANTHERPTHR31576TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT Bcoord: 16..731

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G009490.1CmaCh12G009490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042790 nucleolar large rRNA transcription by RNA polymerase I
biological_process GO:0001188 RNA polymerase I preinitiation complex assembly
biological_process GO:0006360 transcription by RNA polymerase I
cellular_component GO:0070860 RNA polymerase I core factor complex
cellular_component GO:0005668 RNA polymerase transcription factor SL1 complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding