Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATGTTCCATGTCAAAGCTGGAAGATGAAGAGGCTGTTAAACTTTGTAAAGATAGGAAGAACTTTATCAAACAAGCTGTTGAGCAGCGGAGACGATTAGCTTGTGGACATCTAGCCTACATCCAGTCGTTAAAACGAGTATCTACTGCTCTTCGTGAGTATGTCGATGGATACGAACCTCGTGAGTTGTTGTTAGATTCATTCATTACACCACCTTTCACACCTGTAAAGAAAACAAGTCCTGGTCTGATATCAATAACGCCGAGGTCGTTTCCACAACTTCCAATCGAGTCGAAACCGAATCGAGTGGTGAAAGTAAACTACCTAAGATCAGGAGGAAATGGGGCAGTTTCTGTAGAAGAGAGACCCCAATCACCAGAAATAGTGAGAGTTCAATCTTATTCACCTATGCATCAATATGGATTTGATGGTTTCTTTCCAATGCAATCCCCACCAATGAATTCCTCATTCTTCTCTTATTCTCCTAACAACAGACCAAATATCCCTCCCCCGTCACCTACACCCGAAAGTTCGCAATGGGACTTCTTCTGGAATCCGTTTTCGTCGTTGGATAACTACGGCTACCCTTCGAACAATGGTCTCGATCATATGGCAATGGATGATGAGATCAGAGGGCTAAGACAAGTTAGAGAAGAAGAAGGGATTCCCGAACTGGAAGAAGACGAAACCGAGCAGGAAGACAATGACAATAGCTATAGGTGGGAAGGCAACAGCAATAGAGTAAATACCATGGACGACAGAACACAAACTGGCCAAAGTTGTTGTAGAGAGGAAGTTCTTGTCGAAGATGTGGACGAGGATGAAGAAGATGAGGATGAAGATGAGGACGAGGATGAAAACGAGGACGAAATGAACTATGGAAACGAGATGGGCCATGAACTACAAGGCATACGATCTCGTGGTAATGGGAAGATCGACGTTTCAAGAGTCCAGAATGCTGGACCTGTTGCAAGTACAAGCCAAGAATCAGCAGTGGTCGATCTCGAATCAAAGGACGAAACACCGGGTTTTACTGTTTATGTAAACCGAAAGCCAACGAGCATGGCAGAGGTTATCAAAGAGATAGAAGCTCAGTTTATGACAGTTTGTAATTCAGCTAATGAGGTCTCAGCACTGTTAGAGGCTAGGAAAGCTCCCTACATGACTACCTCAAATGAACTTACAGGTTAGTTCCACAAATACTTCTTCTTTTTCCTTCTCGTATGTTGTGAGATCCCACATCTGGGGAGGAGAACGAAACACCCTTTATAAGGACATGGAAACCTCTCCCTAGCAGGCGCATTTTAAAAAACTTGAGGGGAAGCCCGAAAGAGAAAGCCCAAAAAGGACAATATCTGCTAGCGATGAGCTTGAACTATTACAAATGATATTAGAGCCAGACACCAGATAGTGAGCCTCGAAGGGGGGCAGACACCGAGCGGTGTACCAACGATGACGTTGGGCCCAGAGTGGGGTAGATTGTGAGATCCCATGTCAGTTGGGGAGGAGAACGGAACACCCTTAATAAGGGTGTGGAAACCTCTCCTTAGCAGACACGTTTTAAAAACTTTGAAGGGAAACTCGAAATGGAAAGCCCAAAGAAGACAATATCTATTAGAGGTGGGTTTGGGTTGTTACATATGTGATTTGCATTCAAATCATTTGTTCACGAAGTCTAATTCTTCCTTGCAGCCATGAAAATGTTGAATCCAGTAGCATTGTTCCGCTCGGCTTCATCTCGCTCTTCCTCATCGAGATTTCTAATCAGCTCTTCTGCAACTAAGGATGAAAGTGGTTACGAGAGCACCGACGACATATCAGAAGAATCCAGTTCATTTTCACCCGGTCATCAATCAACATTAGATAGATTATATGCTTGGGAGAAGAAGCTCTACCAGGAAGTGAGGGTATGTAGCTCAAATCTTCTTCTGACTTGTAATGTTTCCTGCATTAAAACTAACCACACTATCCAGTTAGGCTACTCAGATCTTAGGAGCCGATTCTTCGATCGTGACAGAGATGATTATTTGGCCTCAAACCATGTTCTAGATGTCTTATATAACTTTCTTTGAGGTATTGCAGCGGAGACGACTGATCTTTATAATTTCCGTCTTATGAAACAGTCTGGAGAAAAGATTCGAATCGCGTACGAGAAGAAGTGTAATCAACTGAGGAACCAAGATGTAAAAGGAGAAGATCCATCTTCAGTAGAAAAAACAAGATCTACCATGAGAGATCTGCATACTCAGATAAAGGTTTCGATCCACTCGGTTGAAGCTGTGGCAAAACGAATCGAAACGTTAAGAGATGAAGAATTGCAACCTCAACTTCAAGAATTGGTTCAAGGGTAAGTATCCATTGTTGAACATGGTTGATTAAACGTGAACCTAGCCATCATAGTTCTTGTGATGAACAGGTTAGCAAGAATGTGGAAGGTAATGGCAGAATGTCATCAACTACAGAAGCTGGCATTAGACGAAGCGAAGCTTCTACTTGCCGGTATACCGTCGAAGTTGGATGCTAGAAAGCTCTCTTCATCTCGTGTCATTGAGCCAAATTGGCTAGCGCGTGCATCAGCCAATCTTGAGACAGAGCTCAGGAATTGGCGTAGCTGTTTTGAGTCATGGATCGGTTCTCAACGATCTTATATGCACGCAATAACCGGATGGCTTCTCCGCTGCGTAAACTCAGATTCCTCCGACGTTACAAAGCCTCCGTTTTCTCCTCGTCGGTCAAATGCATCAGCACTTCCAATCTTTGGGCTTTGCATCCAATGGAAGAGGCTCTTGGATGAAATCCAAGAGAAGCCAGTGCTAGATGGACTTGACTTCTTTGCTGCTGGAATGGGGTCGCTCCATGCACAACAACAGCAACGAGACGACGCTCACCGGATACAAGTCGGGTCACAGAGTTCCAGGGGAGCGGAGGGATCGAGCGGGAACATGGAAATGGTGGAGTTTGGGAAAGTTGAAGATGAAATGAGTGCTGAAAAAATGGCTGAAGTAGCTATAAGAGTGCTGTGTGCTGGATTGTCATTTGCTGTGAGCTCATTGACTGAGTTTGCTATCAGTTCTGCTGATGGATATAGTGATCTTCTTAAGCAAAGGCCAAAAGGAGATGACAGCCAAATGGCTCAATAGGGTTTAAGTGGGATTTGGAACATAATTTTACAAATGCTTTATTTGTAG
mRNA sequence
ATGGGATGTTCCATGTCAAAGCTGGAAGATGAAGAGGCTGTTAAACTTTGTAAAGATAGGAAGAACTTTATCAAACAAGCTGTTGAGCAGCGGAGACGATTAGCTTGTGGACATCTAGCCTACATCCAGTCGTTAAAACGAGTATCTACTGCTCTTCGTGAGTATGTCGATGGATACGAACCTCGTGAGTTGTTGTTAGATTCATTCATTACACCACCTTTCACACCTGTAAAGAAAACAAGTCCTGGTCTGATATCAATAACGCCGAGGTCGTTTCCACAACTTCCAATCGAGTCGAAACCGAATCGAGTGGTGAAAGTAAACTACCTAAGATCAGGAGGAAATGGGGCAGTTTCTGTAGAAGAGAGACCCCAATCACCAGAAATAGTGAGAGTTCAATCTTATTCACCTATGCATCAATATGGATTTGATGGTTTCTTTCCAATGCAATCCCCACCAATGAATTCCTCATTCTTCTCTTATTCTCCTAACAACAGACCAAATATCCCTCCCCCGTCACCTACACCCGAAAGTTCGCAATGGGACTTCTTCTGGAATCCGTTTTCGTCGTTGGATAACTACGGCTACCCTTCGAACAATGGTCTCGATCATATGGCAATGGATGATGAGATCAGAGGGCTAAGACAAGTTAGAGAAGAAGAAGGGATTCCCGAACTGGAAGAAGACGAAACCGAGCAGGAAGACAATGACAATAGCTATAGGTGGGAAGGCAACAGCAATAGAGTAAATACCATGGACGACAGAACACAAACTGGCCAAAGTTGTTGTAGAGAGGAAGTTCTTGTCGAAGATGTGGACGAGGATGAAGAAGATGAGGATGAAGATGAGGACGAGGATGAAAACGAGGACGAAATGAACTATGGAAACGAGATGGGCCATGAACTACAAGGCATACGATCTCGTGGTAATGGGAAGATCGACGTTTCAAGAGTCCAGAATGCTGGACCTGTTGCAAGTACAAGCCAAGAATCAGCAGTGGTCGATCTCGAATCAAAGGACGAAACACCGGGTTTTACTGTTTATGTAAACCGAAAGCCAACGAGCATGGCAGAGGTTATCAAAGAGATAGAAGCTCAGTTTATGACAGTTTGTAATTCAGCTAATGAGGTCTCAGCACTGTTAGAGGCTAGGAAAGCTCCCTACATGACTACCTCAAATGAACTTACAGCCATGAAAATGTTGAATCCAGTAGCATTGTTCCGCTCGGCTTCATCTCGCTCTTCCTCATCGAGATTTCTAATCAGCTCTTCTGCAACTAAGGATGAAAGTGGTTACGAGAGCACCGACGACATATCAGAAGAATCCAGTTCATTTTCACCCGGTCATCAATCAACATTAGATAGATTATATGCTTGGGAGAAGAAGCTCTACCAGGAAGTGAGGTCTGGAGAAAAGATTCGAATCGCGTACGAGAAGAAGTGTAATCAACTGAGGAACCAAGATGTAAAAGGAGAAGATCCATCTTCAGTAGAAAAAACAAGATCTACCATGAGAGATCTGCATACTCAGATAAAGGTTTCGATCCACTCGGTTGAAGCTGTGGCAAAACGAATCGAAACGTTAAGAGATGAAGAATTGCAACCTCAACTTCAAGAATTGGTTCAAGGGTTAGCAAGAATGTGGAAGGTAATGGCAGAATGTCATCAACTACAGAAGCTGGCATTAGACGAAGCGAAGCTTCTACTTGCCGGTATACCGTCGAAGTTGGATGCTAGAAAGCTCTCTTCATCTCGTGTCATTGAGCCAAATTGGCTAGCGCGTGCATCAGCCAATCTTGAGACAGAGCTCAGGAATTGGCGTAGCTGTTTTGAGTCATGGATCGGTTCTCAACGATCTTATATGCACGCAATAACCGGATGGCTTCTCCGCTGCGTAAACTCAGATTCCTCCGACGTTACAAAGCCTCCGTTTTCTCCTCGTCGGTCAAATGCATCAGCACTTCCAATCTTTGGGCTTTGCATCCAATGGAAGAGGCTCTTGGATGAAATCCAAGAGAAGCCAGTGCTAGATGGACTTGACTTCTTTGCTGCTGGAATGGGGTCGCTCCATGCACAACAACAGCAACGAGACGACGCTCACCGGATACAAGTCGGGTCACAGAGTTCCAGGGGAGCGGAGGGATCGAGCGGGAACATGGAAATGGTGGAGTTTGGGAAAGTTGAAGATGAAATGAGTGCTGAAAAAATGGCTGAAGTAGCTATAAGAGTGCTGTGTGCTGGATTGTCATTTGCTGTGAGCTCATTGACTGAGTTTGCTATCAGTTCTGCTGATGGATATAGTGATCTTCTTAAGCAAAGGCCAAAAGGAGATGACAGCCAAATGGCTCAATAGGGTTTAAGTGGGATTTGGAACATAATTTTACAAATGCTTTATTTGTAG
Coding sequence (CDS)
ATGGGATGTTCCATGTCAAAGCTGGAAGATGAAGAGGCTGTTAAACTTTGTAAAGATAGGAAGAACTTTATCAAACAAGCTGTTGAGCAGCGGAGACGATTAGCTTGTGGACATCTAGCCTACATCCAGTCGTTAAAACGAGTATCTACTGCTCTTCGTGAGTATGTCGATGGATACGAACCTCGTGAGTTGTTGTTAGATTCATTCATTACACCACCTTTCACACCTGTAAAGAAAACAAGTCCTGGTCTGATATCAATAACGCCGAGGTCGTTTCCACAACTTCCAATCGAGTCGAAACCGAATCGAGTGGTGAAAGTAAACTACCTAAGATCAGGAGGAAATGGGGCAGTTTCTGTAGAAGAGAGACCCCAATCACCAGAAATAGTGAGAGTTCAATCTTATTCACCTATGCATCAATATGGATTTGATGGTTTCTTTCCAATGCAATCCCCACCAATGAATTCCTCATTCTTCTCTTATTCTCCTAACAACAGACCAAATATCCCTCCCCCGTCACCTACACCCGAAAGTTCGCAATGGGACTTCTTCTGGAATCCGTTTTCGTCGTTGGATAACTACGGCTACCCTTCGAACAATGGTCTCGATCATATGGCAATGGATGATGAGATCAGAGGGCTAAGACAAGTTAGAGAAGAAGAAGGGATTCCCGAACTGGAAGAAGACGAAACCGAGCAGGAAGACAATGACAATAGCTATAGGTGGGAAGGCAACAGCAATAGAGTAAATACCATGGACGACAGAACACAAACTGGCCAAAGTTGTTGTAGAGAGGAAGTTCTTGTCGAAGATGTGGACGAGGATGAAGAAGATGAGGATGAAGATGAGGACGAGGATGAAAACGAGGACGAAATGAACTATGGAAACGAGATGGGCCATGAACTACAAGGCATACGATCTCGTGGTAATGGGAAGATCGACGTTTCAAGAGTCCAGAATGCTGGACCTGTTGCAAGTACAAGCCAAGAATCAGCAGTGGTCGATCTCGAATCAAAGGACGAAACACCGGGTTTTACTGTTTATGTAAACCGAAAGCCAACGAGCATGGCAGAGGTTATCAAAGAGATAGAAGCTCAGTTTATGACAGTTTGTAATTCAGCTAATGAGGTCTCAGCACTGTTAGAGGCTAGGAAAGCTCCCTACATGACTACCTCAAATGAACTTACAGCCATGAAAATGTTGAATCCAGTAGCATTGTTCCGCTCGGCTTCATCTCGCTCTTCCTCATCGAGATTTCTAATCAGCTCTTCTGCAACTAAGGATGAAAGTGGTTACGAGAGCACCGACGACATATCAGAAGAATCCAGTTCATTTTCACCCGGTCATCAATCAACATTAGATAGATTATATGCTTGGGAGAAGAAGCTCTACCAGGAAGTGAGGTCTGGAGAAAAGATTCGAATCGCGTACGAGAAGAAGTGTAATCAACTGAGGAACCAAGATGTAAAAGGAGAAGATCCATCTTCAGTAGAAAAAACAAGATCTACCATGAGAGATCTGCATACTCAGATAAAGGTTTCGATCCACTCGGTTGAAGCTGTGGCAAAACGAATCGAAACGTTAAGAGATGAAGAATTGCAACCTCAACTTCAAGAATTGGTTCAAGGGTTAGCAAGAATGTGGAAGGTAATGGCAGAATGTCATCAACTACAGAAGCTGGCATTAGACGAAGCGAAGCTTCTACTTGCCGGTATACCGTCGAAGTTGGATGCTAGAAAGCTCTCTTCATCTCGTGTCATTGAGCCAAATTGGCTAGCGCGTGCATCAGCCAATCTTGAGACAGAGCTCAGGAATTGGCGTAGCTGTTTTGAGTCATGGATCGGTTCTCAACGATCTTATATGCACGCAATAACCGGATGGCTTCTCCGCTGCGTAAACTCAGATTCCTCCGACGTTACAAAGCCTCCGTTTTCTCCTCGTCGGTCAAATGCATCAGCACTTCCAATCTTTGGGCTTTGCATCCAATGGAAGAGGCTCTTGGATGAAATCCAAGAGAAGCCAGTGCTAGATGGACTTGACTTCTTTGCTGCTGGAATGGGGTCGCTCCATGCACAACAACAGCAACGAGACGACGCTCACCGGATACAAGTCGGGTCACAGAGTTCCAGGGGAGCGGAGGGATCGAGCGGGAACATGGAAATGGTGGAGTTTGGGAAAGTTGAAGATGAAATGAGTGCTGAAAAAATGGCTGAAGTAGCTATAAGAGTGCTGTGTGCTGGATTGTCATTTGCTGTGAGCTCATTGACTGAGTTTGCTATCAGTTCTGCTGATGGATATAGTGATCTTCTTAAGCAAAGGCCAAAAGGAGATGACAGCCAAATGGCTCAATAG
Protein sequence
MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVDGYEPRELLLDSFITPPFTPVKKTSPGLISITPRSFPQLPIESKPNRVVKVNYLRSGGNGAVSVEERPQSPEIVRVQSYSPMHQYGFDGFFPMQSPPMNSSFFSYSPNNRPNIPPPSPTPESSQWDFFWNPFSSLDNYGYPSNNGLDHMAMDDEIRGLRQVREEEGIPELEEDETEQEDNDNSYRWEGNSNRVNTMDDRTQTGQSCCREEVLVEDVDEDEEDEDEDEDEDENEDEMNYGNEMGHELQGIRSRGNGKIDVSRVQNAGPVASTSQESAVVDLESKDETPGFTVYVNRKPTSMAEVIKEIEAQFMTVCNSANEVSALLEARKAPYMTTSNELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDESGYESTDDISEESSSFSPGHQSTLDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGEDPSSVEKTRSTMRDLHTQIKVSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKVMAECHQLQKLALDEAKLLLAGIPSKLDARKLSSSRVIEPNWLARASANLETELRNWRSCFESWIGSQRSYMHAITGWLLRCVNSDSSDVTKPPFSPRRSNASALPIFGLCIQWKRLLDEIQEKPVLDGLDFFAAGMGSLHAQQQQRDDAHRIQVGSQSSRGAEGSSGNMEMVEFGKVEDEMSAEKMAEVAIRVLCAGLSFAVSSLTEFAISSADGYSDLLKQRPKGDDSQMAQ
Homology
BLAST of CmaCh12G009000 vs. ExPASy Swiss-Prot
Match:
Q93YU8 (Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 3.7e-34
Identity = 189/741 (25.51%), Postives = 327/741 (44.13%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVDGYE 60
MGC+ SKL++E+AV+ CKDR+ +K+AV R LA H Y +SL+ +AL + G E
Sbjct: 1 MGCAASKLDNEDAVRRCKDRRRLMKEAVYARHHLAAAHADYCRSLRITGSALSSFASG-E 60
Query: 61 PRELLLDS---FITPPFTPVKKTSPGLISITPRSFPQ------LPIESKPN--RVVKVNY 120
P + + F+ P P+ + SP + PR P P + P+ + +
Sbjct: 61 PLSVSDQTPAVFLHTPPPPLSEQSPAKF-VPPRFSPSPAPSSVYPPSTSPSVASSKQPSV 120
Query: 121 LRSGGNGAVSVEERPQSPEIVRVQSYSPMHQYGFDGFFPMQSP-PMNSSFFSYSPN---- 180
+ + N + +P+ P I+ S S + F P P +S +S +P+
Sbjct: 121 MSTSSNRRRKQQPKPRLPHILSESSPSSSPRSERSNFMPNLYPSAYQNSTYSATPSHASS 180
Query: 181 --NRPNIPPPSPTPESSQWDFFWNPFSSLDNYGYPSNNGLDHMAMDDE-----IRGLRQV 240
N N PPSP P+S +FF + N D + E R +Q
Sbjct: 181 VWNWENFYPPSP-PDS---EFFNRKAQEKKHNSDNRFNDEDTETVRSEYDFFDTRKQKQK 240
Query: 241 REEEGIPELEED-ETEQEDNDNSYRWEGNSNRVNTMDDRTQTGQSCCREEVLVEDVDEDE 300
+ E ++EE+ ETE+E+ S WE + + T D
Sbjct: 241 QFESMRNQVEEETETEREEVQCS-EWEDHDHYSTTS--------------------SSDA 300
Query: 301 EDEDEDEDEDENEDEMNYGNEMGHELQGIRSRGNGKIDVSRVQNAGPVASTSQESAVVDL 360
+E+E++D+ E+ E+ +E G ++ R + + Q G + + A
Sbjct: 301 AEEEEEDDDRESISEVGTRSEFGSTVRSNSMRRHHQQPSPMPQVYGGAEQSKYDKADDAT 360
Query: 361 ESKDETPGFTVYVNRKPT----SMAEVIKEIEAQFMTVCNSANEVSALLEARKAPYMTTS 420
S G + K + E+I I+ F S +VS +LE +A +
Sbjct: 361 ISSGSYRGGGDIADMKMVVRHRDLKEIIDAIKENFDKAAASGEQVSQMLELGRAELDRSF 420
Query: 421 NELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDESGYESTDDISEESSSFSPGHQST 480
++L + + L +S+ +S + D + + + S ST
Sbjct: 421 SQLKKTVIHSSSLLSNLSSTWTSKPPLAVK----------YRIDTTALDQPNSSKSLCST 480
Query: 481 LDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGEDPSSVEKTRSTMRDLHTQIK 540
LDRL AWEKKLY+E+++ E +I +EKK +QL++Q+ KGED + ++KT++++ L + I
Sbjct: 481 LDRLLAWEKKLYEEIKAREGFKIEHEKKLSQLQSQEYKGEDEAKLDKTKASITRLQSLII 540
Query: 541 VSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKVMAECHQLQKLALDEAKLLLAGI 600
V+ +V + I LRD +L PQL EL G MWK M + H+ Q +++ + L+
Sbjct: 541 VTSQAVTTTSTAIIRLRDTDLVPQLVELCHGFMYMWKSMHQYHETQNSIVEQVRGLI--- 600
Query: 601 PSKLDARKLSSSRVIEPNWLARASANLETELRNWRSCFESWIGSQRSYMHAITGW----L 660
+ S+S + +A+ +LE+ + +W S F S I QR ++H++ W L
Sbjct: 601 --NRSGKGESTSELHR-----QATRDLESAVSSWHSSFSSLIKFQRDFIHSVHAWFKLTL 660
Query: 661 LRCVNSDSSDVTKPPFSPRRSNASALPIFGLCIQWKRLLDEIQEKPVLDGLDFFAAGMGS 710
L D+++ K P L + C +WK LD I + + + F +
Sbjct: 661 LPVCQEDAANHHKEP----------LDAYAFCDEWKLALDRIPDTVASEAIKSF---INV 681
BLAST of CmaCh12G009000 vs. ExPASy Swiss-Prot
Match:
A0A178VBJ0 (Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=APSR1 PE=2 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.3e-31
Identity = 117/408 (28.68%), Postives = 193/408 (47.30%), Query Frame = 0
Query: 323 PVASTSQESAVVDLESKD----ETPG--FTVYVNRKPTSMAEVIKEIEAQFMTVCNSANE 382
P +T Q S+VV SKD T G V V+R + E+IKE++ F+ +S
Sbjct: 163 PTTATPQASSVVSGFSKDTMTTTTTGSELAVVVSRNGKDLMEIIKEVDEYFLKAADSGAP 222
Query: 383 VSALLEARKAPYMTTSNELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDESGYESTD 442
+S+LLE T+ + + + + + + F A S Y +
Sbjct: 223 LSSLLE-----ISTSITDFSGHSKSGKMYSSSNYECNLNPTSFWTRGFAPSKLSEYRNAG 282
Query: 443 DISEESSSFSPGHQSTLDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGEDPSS 502
+ + H ST+DRLYAWEKKLYQEV+ E I++ +EKK Q+R ++K +
Sbjct: 283 GVI-GGNCIVGSHSSTVDRLYAWEKKLYQEVKYAESIKMDHEKKVEQVRRLEMKRAEYVK 342
Query: 503 VEKTRSTMRDLHTQIKVSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKVMAECHQ 562
EK + + L +Q+ VS ++++ + I LR+ EL PQL ELV+GL MW+ M E HQ
Sbjct: 343 TEKAKKDVEKLESQLSVSSQAIQSASNEIIKLRETELYPQLVELVKGLMCMWRSMYESHQ 402
Query: 563 LQKLALDEAKLLLAGIPSKLDARKLSSSRVIEPNWLARASANLETELRNWRSCFESWIGS 622
+Q + + K L IPS +L ++ LE E++ W F + + +
Sbjct: 403 VQTHIVQQLKYLNT-IPSTEPTSELHRQSTLQ----------LELEVQQWHHSFCNLVKA 462
Query: 623 QRSYMHAITGWLLRCVNSDSSDVTKPPFSPRRSNASALPIFGLCIQWKRLLDEIQEKPVL 682
QR Y+ ++TGWL + S +P ++ I+ C +W +D I +K
Sbjct: 463 QRDYIQSLTGWLRLSLFQFSK-------NPLVRSSYESKIYSFCEEWHLAIDRIPDKVAS 522
Query: 683 DGLDFFAAGMGSLHAQQQQRDDAHRIQVGSQSS-RGAEGSSGNMEMVE 724
+G+ F + + AQQ D H+ + ++S + E S ++ +E
Sbjct: 523 EGIKSFLTAVHGIVAQQA---DEHKQKKRTESMLKDFEKKSASLRALE 543
BLAST of CmaCh12G009000 vs. ExPASy Swiss-Prot
Match:
Q9AQW1 (Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL2 PE=2 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 2.5e-30
Identity = 176/716 (24.58%), Postives = 301/716 (42.04%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVDG-- 60
MGC+ SK+E E+ V+ CK+R+ +K+AV R++LA H Y++SL+ + AL + G
Sbjct: 1 MGCTASKVEQEDTVRRCKERRRHMKEAVASRQQLASAHADYLRSLRLTAAALSRFAQGHP 60
Query: 61 -----YEPRELLLDS---FITPPFTPVKKTSPGLISITPRS----------FPQLPIES- 120
+ +LL + + P TP +S S+ P + P P +S
Sbjct: 61 SLAVSHHTAPVLLTTAAPALAPTPTPPPPSSTASSSLPPPTPLLPKHQQAPPPPPPTQSH 120
Query: 121 KPNRVVKVNYLRSGGNGAVSVEERPQSPEIVRVQSYSPMHQYGFDGFFPMQSPPMNSSFF 180
+P V V R G R + P I+ S + + F P+ P +SS +
Sbjct: 121 QPPPPVAVRAPRGG-------PRRLKVPHILSDSSVASPARSSFRK--PVVGTPSSSSAW 180
Query: 181 SYSPNNRPNIPPPSPTPESSQWDFFWNPFSSLDNYGYPSNNGLDHMAMDDEIRGLRQVRE 240
+ N PPSP P+S +FF + L+ N L + +++ RG
Sbjct: 181 DWE-----NFYPPSP-PDS---EFFDRRKADLE-----EANRLRELEEEEKARGYLHPHH 240
Query: 241 EEGIPELEEDETEQEDNDNSYRWEGNSNRVNTMDDRTQTGQSCCREEVLVEDVDEDEEDE 300
+ E+++D+ E+E+ + WE D+D
Sbjct: 241 LKEEDEVDDDDDEREEEMHCGGWED----------------------------DDDHYAS 300
Query: 301 DEDEDEDENEDEMNYGNEMGHELQGIRSRGNGKIDVSRVQNAGPVASTSQESAVVDLESK 360
+ E EM +E G + G + + P+ + S D S
Sbjct: 301 TTTSETRSEEGEMGNRSECGFAARS-EYGGTAPSEYAAAPLPLPLRRRDERSEAGD-SSS 360
Query: 361 DETPGFTVYVNRKPTSMAEVIKEIEAQFMTVCNSANEVSALLEARKAPYMTTSNELTAMK 420
T + + + ++AE++ IE F+ + N VS LLEA +A +L
Sbjct: 361 TVTAAAEMRMVIRHRTLAEIVAAIEEYFVKAAEAGNGVSELLEASRAQLDRNFRQLKK-- 420
Query: 421 MLNPVALFRSASSRSSSSRFLISSSATKDESGYESTDDISEESSSFSPGHQSTLDRLYAW 480
++ S S SS S S Y+ + E S H STL+RL AW
Sbjct: 421 -----TVYHSNSLLSSLSSTWTSKPPLAVR--YKLDTNALEMESMEGKSHGSTLERLLAW 480
Query: 481 EKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGEDPSSVEKTRSTMRDLHTQIKVSIHSVE 540
EKKLYQEV++ E ++I +EKK + L++ + +G D + ++KT++++ L + I V+ +
Sbjct: 481 EKKLYQEVKARESVKIEHEKKLSTLQSLEYRGRDSTKLDKTKASINKLQSLIIVTSQAAT 540
Query: 541 AVAKRIETLRDEELQPQLQELVQGLARMWKVMAECHQLQKLALDEAKLLLAGIPSKLDAR 600
+ I +RD EL PQL EL L MW+ M H++Q + + + G+ A
Sbjct: 541 TTSSAIVRVRDNELAPQLVELCFALLSMWRSMNHFHEIQNEIVQQVR----GLVDNSMAE 600
Query: 601 KLSSSRVIEPNWLARASANLETELRNWRSCFESWIGSQRSYMHAITGWLLRCVNSDSSDV 660
S + A+ +LE + W S F I QR Y+ A+ GWL + S++
Sbjct: 601 STSDLHRL-------ATRDLEAAVSAWHSNFNRLIKYQRDYIRALYGWLKLTLFQVDSNI 639
Query: 661 TKPPFSPRRSNASALPIFGLCIQWKRLLDEIQEKPVLDGLDFFAAGMGSLHAQQQQ 696
+ ++ S + C +WK+ LD + + + + F + ++ +Q +
Sbjct: 661 PQEAYTSLISR----ELTTFCDEWKQALDRLPDASASEAIKSFVNVVHVIYTKQAE 639
BLAST of CmaCh12G009000 vs. TAIR 10
Match:
AT2G19090.1 (Protein of unknown function (DUF630 and DUF632) )
HSP 1 Score: 670.2 bits (1728), Expect = 2.0e-192
Identity = 433/821 (52.74%), Postives = 549/821 (66.87%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYV-DGY 60
MGCS SKL+DEEAV++CKDRK FIKQA+E R + A GH+AYI SL++VS AL +++ G
Sbjct: 1 MGCSHSKLDDEEAVQICKDRKRFIKQAIEHRTKFASGHIAYIHSLRKVSDALHDFILQGD 60
Query: 61 EPRE----LLLDSFITP-------PFTPVKKTSPGLISITPRSFPQLPIESKPNRVVKVN 120
E L DSF+TP + S ISI+P S P I+ +P VK N
Sbjct: 61 NNNEFVPTLCQDSFVTPVKRMPQRRRRSSRSNSGEFISISPSSIPPKMIQGRPRSNVKAN 120
Query: 121 YLRSGGNGAVSVEERPQSPEIVRVQSYSP---MHQYG-FDGFFPMQ-----SPPMNSSFF 180
YL + + V VE+R SPE RV+++SP +QYG DGFF M S +SSF+
Sbjct: 121 YLMANRSRPVRVEQR--SPETFRVETFSPPSSSNQYGESDGFFGMNMNMNTSASTSSSFW 180
Query: 181 S--YSPNNR---PNIPPPSPTPESSQWDFFWNPFSSLDNYGYPS--NNGLD-HMAMDDEI 240
+ SP R NIPPPS P++SQWDFFWNPFSSLD YGY S +D +DDEI
Sbjct: 181 NPLSSPEQRLSSHNIPPPS--PQNSQWDFFWNPFSSLDYYGYNSYDRGSVDSRSGIDDEI 240
Query: 241 RGLRQVREEEGIPELEE-DETEQEDNDNSYRWEG-NSNRVNTMDDRTQTGQSCCREEVLV 300
RGLR+VREEEGIP+LEE DE + + + R++ N N T ++R + +SCC EEV V
Sbjct: 241 RGLRRVREEEGIPDLEEDDEPHKPEPVVNVRFQNHNPNPKATEENRGKVDKSCCNEEVKV 300
Query: 301 EDVDEDEEDEDEDEDEDENEDE-MNYGNEMGHELQGIRSRGNGKIDVSR----VQNAGPV 360
EDVDED EDED DED+DE D NE + ++ K +V R N V
Sbjct: 301 EDVDED-EDEDGDEDDDEFTDSGCETENEGDEKCVAPPTQEQRKAEVCRGGEATGNVVGV 360
Query: 361 ASTSQESAVVDLESKDETPGFTVYVNRKPTSMAEVIKEIEAQFMTVCNSANEVSALLEAR 420
+ VV + +T GFTVYVNR+PTSMAEVIK++E QF T+C++A EVS LLEA
Sbjct: 361 GKVQEMKNVVGVRDDAKTTGFTVYVNRRPTSMAEVIKDLEDQFTTICDAAKEVSGLLEAG 420
Query: 421 KAPYMTTSNELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDESGYESTDDISEESSS 480
+A Y ++ N+ +A KMLNPVALFRS SSRSSSSRFLI+SS ESG ES D+S+ES
Sbjct: 421 RAQYTSSFNDHSARKMLNPVALFRSGSSRSSSSRFLITSSGGSRESGSESRSDVSDESCM 480
Query: 481 FSPGHQSTLDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGEDPSSVEKTRSTM 540
S HQ+TLDRL+AWEKKLY EVRSGE++R AYEKKC QLRNQDVKG+DP +V+KTR+T+
Sbjct: 481 ISGSHQTTLDRLFAWEKKLYDEVRSGERVRRAYEKKCMQLRNQDVKGDDPLAVDKTRATI 540
Query: 541 RDLHTQIKVSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKVMAECHQLQKLALDE 600
RDL TQIKVSIHS+E+++KRIETLRD+EL PQL ELV+GL RMWKVMAE HQ+QK LDE
Sbjct: 541 RDLDTQIKVSIHSIESISKRIETLRDQELLPQLLELVEGLTRMWKVMAESHQIQKRTLDE 600
Query: 601 AKLLLAGIPSKLDARKLS---SSRVIEPNWLARASANLETELRNWRSCFESWIGSQRSYM 660
AKLLLAG P +K I LA+++ NLE +LRNWR+CFE WI SQRSYM
Sbjct: 601 AKLLLAGTPVSKRHKKRQPPIMPEAINSQRLAQSALNLEAQLRNWRTCFEFWITSQRSYM 660
Query: 661 HAITGWLLRCVNSDSSDVTKPPFSPRRSNASALPIFGLCIQWKRLLDEIQEKPVLDGLDF 720
A++GWLLRC D P R ++ PI+ +CIQW RLL+ + EKPVLD L+F
Sbjct: 661 KALSGWLLRCFRCD------PDPEKVRLSSCLHPIYRVCIQWSRLLNSLNEKPVLDKLEF 720
Query: 721 FAAGMGSLHAQQQQRDDAHRIQVGSQSSRGAEGSSGNMEMVEFGKVEDE--MSAEKMAEV 780
FA+GMGS++A +Q R+D + GS+ G+E +ME+V K E++ M+AEK+AEV
Sbjct: 721 FASGMGSIYA-RQVREDPNWSGSGSRRYSGSE----SMELVVADKGEEDVVMTAEKLAEV 780
BLAST of CmaCh12G009000 vs. TAIR 10
Match:
AT4G30130.1 (Protein of unknown function (DUF630 and DUF632) )
HSP 1 Score: 629.8 bits (1623), Expect = 2.9e-180
Identity = 402/783 (51.34%), Postives = 520/783 (66.41%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVDGYE 60
MGCS SK +D+EAV++CKDRK FIKQAVE R A GH+AYIQSL++VS ALREY++G E
Sbjct: 1 MGCSHSKFDDDEAVQICKDRKRFIKQAVEHRTGFASGHIAYIQSLRKVSDALREYIEGDE 60
Query: 61 PRELLLDSFITPPFTPVKK--TSPGLISITPRSFPQLPIESKPNRVVKVN-YLRSGGNGA 120
P E +LD+ + TPVK+ +S G I I+P P ++S+ + VN YL + G+
Sbjct: 61 PHEFMLDTCV----TPVKRMSSSGGFIEISP---PSKMVQSEAESKLNVNSYLMASGSRP 120
Query: 121 VSVEER-PQSPEIVRVQSYSPMHQYGFDGFFPMQSPPMNSSFFSYSPNNRPNIPPPSPTP 180
V VEE+ P+SPE +V++ YG D FF M + S+ NIPPPS P
Sbjct: 121 VRVEEKPPRSPETFQVET------YGADSFFGMNMNMNSPGLGSH------NIPPPS--P 180
Query: 181 ESSQWDFFWNPFSSLDNYGYPSNNGLDHMAMDDEIRGLRQVREEEGIPELEEDE-TEQED 240
++SQWDFFWNPFS+LD YGY +N MDD++R LR+VREEEGIP+LEEDE + ED
Sbjct: 181 QNSQWDFFWNPFSALDQYGYSYDN---QNGMDDDMRRLRRVREEEGIPDLEEDEYVKFED 240
Query: 241 NDNSYRWEGNSNRVNTMDDRTQTGQSCCREEVLVEDVDEDEEDEDEDEDEDENEDEMNYG 300
+ N E + +D+ VE V+E+ D + ENE + N
Sbjct: 241 HHNMKATEDFNGGKMYQEDK-------------VEHVNEEFTDSG---CKIENESDKN-- 300
Query: 301 NEMGHELQGIRSRGNGKIDVSRVQNAGPVASTSQESAVVDLESKDETPGFTVYVNRKPTS 360
G + R + ++VSR G V + + + K ETPGFTVY+NR+PTS
Sbjct: 301 ------CNGTQERRS--LEVSRGGTTGHVVGVTSD------DGKGETPGFTVYLNRRPTS 360
Query: 361 MAEVIKEIEAQFMTVCNSANEVSALLEARKAPYMTTSNELTAMKMLNPVALFRS--ASSR 420
MAEVIK++E QF +C + EVS LLEA + Y T+SNEL+AM MLNPVALFRS +S
Sbjct: 361 MAEVIKDLEDQFAIICTAGKEVSGLLEASRVQY-TSSNELSAMTMLNPVALFRSGGSSRS 420
Query: 421 SSSSRFLISSSATKDESGYESTDDISEESSSFSPGHQSTLDRLYAWEKKLYQEVRSGEKI 480
SSSSRFLISSS S +ES+ + SEES S HQSTLDRLYAWEKKLY EV+SG++I
Sbjct: 421 SSSSRFLISSSGGSRASEFESSSEFSEESCMLSGSHQSTLDRLYAWEKKLYDEVKSGDRI 480
Query: 481 RIAYEKKCNQLRNQDVKGEDPSSVEKTRSTMRDLHTQIKVSIHSVEAVAKRIETLRDEEL 540
RIAYEKKC LRNQDVKG D S+V+KTR+T+RDLHTQIKVSIHS+E++++RIETLRD+EL
Sbjct: 481 RIAYEKKCLVLRNQDVKGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETLRDQEL 540
Query: 541 QPQLQELVQGLARMWKVMAECHQLQKLALDEAKLLLAGIPSKLDARKLSSS-RVIEPNWL 600
PQL ELVQGLA+MWKVMAECHQ+QK LDEAKLLLA PS ++ +S I L
Sbjct: 541 LPQLLELVQGLAQMWKVMAECHQIQKRTLDEAKLLLATTPSNRHKKQQQTSLPEINSQRL 600
Query: 601 ARASANLETELRNWRSCFESWIGSQRSYMHAITGWLLRCVNSDSSDVTKPPFSPRRSNAS 660
AR++ +L +LRNWR+CF++WI SQRSY+ ++TGWLLRC D P +
Sbjct: 601 ARSALHLVVQLRNWRACFQAWITSQRSYILSLTGWLLRCFRCD------PDPEKVTLTSC 660
Query: 661 ALPIFGLCIQWKRLLDEIQEKPVLDGLDFFAAGMGSLHAQQQQRDDAHRIQVGSQSSRGA 720
PI+ +CIQW RLL+ + EKPVLD LDFFA+GMG+++A+Q + D + + SR
Sbjct: 661 PHPIYEVCIQWSRLLNGLNEKPVLDKLDFFASGMGAIYARQLKEDTSPVTDSSRKYSR-- 715
Query: 721 EGSSGNMEMVEFGKVEDE--MSAEKMAEVAIRVLCAGLSFAVSSLTEFAISSADGYSDLL 774
+ME+VE KVE+E M+AEK+AE+A++VLC G+S AVSSL EF+ISSAD +S L+
Sbjct: 721 ---PESMELVEAEKVEEEKIMTAEKLAEIAVKVLCHGMSVAVSSLAEFSISSADEHSKLV 715
BLAST of CmaCh12G009000 vs. TAIR 10
Match:
AT2G17110.1 (Protein of unknown function (DUF630 and DUF632) )
HSP 1 Score: 216.9 bits (551), Expect = 6.0e-56
Identity = 230/814 (28.26%), Postives = 359/814 (44.10%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVDGYE 60
MGCS SKL+D AV LC+DR +F++ A+ QR L+ H++Y QSLK +S +L ++++ +
Sbjct: 1 MGCSTSKLDDLPAVALCRDRCSFLEAAIHQRYALSEAHVSYTQSLKAISHSLHQFINHHH 60
Query: 61 PRELLLDSFITPPFTPVKKTSPGLISITP----------RSFPQLPI-------ESKPNR 120
DS P + G + S P+ +S P
Sbjct: 61 RYN---DSDSPKKAKPKMDSGSGHLDFDSDSDSDDDDDIDSLHSSPLHHHLEDDDSNPKS 120
Query: 121 VVKVNYLR-SGGNGAVSVEERPQSPEIVRV--QSYSPMHQYGFDGFFPMQSPPMNSSFFS 180
+ +NY++ S ++ E+RP SP+ V S S +Y +P +NS++ S
Sbjct: 121 YLHMNYMKNSYMPPSLVYEQRPSSPQRVHFGESSSSSTSEY---------NPYLNSNYGS 180
Query: 181 YSPNNRPNIPPPSPTPESSQWDFFWNPFSSLDNYGYPSNNGLDHMAMDDEIRGLRQVREE 240
P PPPSP P WDF +PF D Y P R R++R+E
Sbjct: 181 KLPP-----PPPSP-PREKVWDFL-DPF---DTYYTPYTPS----------RDTRELRDE 240
Query: 241 EGIPELEEDETEQEDNDNSYRWEGNSNRVNTMDDRTQTGQSCCREEVLVEDVDEDEEDED 300
G+P+LEED+ ++ ++ V V+E
Sbjct: 241 LGVPDLEEDDVVVKEVHGKQKF------------------------VAAVSVEEP----- 300
Query: 301 EDEDEDENEDEMNYGNEMGHELQGIRSRGNGKIDVSRVQNAGPVASTSQESAVVDLESK- 360
GN G G GK + + + + V E V +E K
Sbjct: 301 -------------LGNSGASTSGG--GGGGGKASLYQTRPSVSVEKEEMEHEVHIVEKKI 360
Query: 361 -DETPGFTVYVNRKPTS---------MAEVIKEIEAQFMTVCNSANEVSALLEARKAPY- 420
+++ G V ++ + + EV KEIEAQF+ S NE++ +LE K PY
Sbjct: 361 VEDSGGDEVRKSKAAVARGGGGVRRGVPEVAKEIEAQFLRAAESGNEIAVMLEVGKHPYG 420
Query: 421 -MTTSNELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDESGYESTDDISEESSSFSP 480
S++ +P + + SS S ++ SSS T + DI E + S
Sbjct: 421 RKNVSSKKLYEGTPSPSVVSSAQSSTSKKAKAEASSSVTA-----PTYADIEAELALKSR 480
Query: 481 GHQSTLDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGEDPSSVEKTRSTMRDL 540
STL +L+ WEKKLY EV++ EK+R+ +EKK +L+ D +G + V+ TR +R L
Sbjct: 481 NLSSTLHKLHLWEKKLYDEVKAEEKMRVNHEKKLRKLKRMDERGAENQKVDSTRKLVRSL 540
Query: 541 HTQIKVSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKVMAECHQLQKLALDEAKL 600
T+I+++I V+ ++ I +RDEEL QL EL+QGL++MWK M ECH+ Q A+ EA+
Sbjct: 541 STKIRIAIQVVDKISVTINKIRDEELWLQLNELIQGLSKMWKSMLECHKSQCEAIKEARG 600
Query: 601 LLAGIPSKLDARKLSSSRVIEPNWLARASANLETELRNWRSCFESWIGSQRSYMHAITGW 660
L + A K +E + L EL NW F SW+ +Q+ ++ + W
Sbjct: 601 L-----GPIRASKNFGGEHLE------VTRTLGYELINWIVGFSSWVSAQKGFVRELNSW 660
Query: 661 LLRCVNSDSSDVTK--PPFSPRRSNASALPIFGLCIQWKRLLDEIQEKPVLDGLDFFAAG 720
L++C+ + + PFSP R A IF +C QW++ LD I EK V++ + F
Sbjct: 661 LMKCLFYEPEETPDGIVPFSPGRIGAPM--IFVICNQWEQALDRISEKEVIEAIRRFTTS 716
Query: 721 MGSLHAQQQQRDDAHRIQVGSQSSRGAEGSSG---------NMEMVEFGKVEDEMSAEKM 771
+ LH +Q R +G R + M+MV G ED + +
Sbjct: 721 V--LHLWEQDRLATRERIIGHGDPRNMDREEQRIQKEIQELEMKMVLVGPGEDNIVYQ-- 716
BLAST of CmaCh12G009000 vs. TAIR 10
Match:
AT1G77500.1 (Protein of unknown function (DUF630 and DUF632) )
HSP 1 Score: 212.6 bits (540), Expect = 1.1e-54
Identity = 238/843 (28.23%), Postives = 367/843 (43.53%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVD--- 60
MGC SK++++ V LC++RK +K A R LA HL Y QSL V A++ +VD
Sbjct: 1 MGCGGSKVDNQPIVILCRERKELLKAASYHRSALAVAHLTYFQSLSDVGEAIQRFVDDEV 60
Query: 61 --GYEPRELLLDSFITPPF-----TPVKKTSPGL-------------------------- 120
G+ +T P T K+ SP
Sbjct: 61 VAGFSSSSSPDSPVLTLPSDEGKPTKHKRISPSSTTSISHSVIEEEDTDDDSHLHLSSGS 120
Query: 121 -----------ISITPRSFPQLPIESKPNRVVKVNYLR-------------SGGNGAVSV 180
I IT + ES P+ NY S G S
Sbjct: 121 ESESEVGSKDHIQITSTPEQERSTESFPSGYHPTNYAPPVYPPGYPPGYPFSYPTGYSSG 180
Query: 181 EERPQSPEIVRVQSYSPMHQYGFDGFFPMQSPPMNSSFFSYSPNNR-------------- 240
+P P +Y+ + YG G + M+ S F + P N
Sbjct: 181 NYQPGYP------NYTGENPYGNRGMYYMKKSAPQSRPFIFQPENHRVEENAQWPSDSGF 240
Query: 241 ----------PNIPPPSPTPESSQWDFFWNPFSSLDNYGYPSNNGLDH----MAMDDEIR 300
+PPPSP P S WDF N F + D Y + + MA
Sbjct: 241 RNTGVQRRSPSPLPPPSP-PTVSTWDFL-NVFDTYD-YSNARSRASGYYPMGMASISSSP 300
Query: 301 GLRQVREEEGIPELEEDETEQEDNDNSYRWEGNSNRVNTMDDRTQTGQSCC-------RE 360
++VRE EGIPELEE TEQE YR + R + + RE
Sbjct: 301 DSKEVREREGIPELEE-VTEQEVIKQVYRRPKRPGLEKVKEHRDEHKHNVFPERNINKRE 360
Query: 361 EVLVEDVDEDEEDED--EDEDEDENEDEMNYGNEMGHELQGIRSRGNG-------KIDVS 420
+ E V E D + + E E +Y N + I S +G +++
Sbjct: 361 VPMPEQVTESSLDSETISSFSGSDVESEFHYVNGGEGKSSSISSISHGAGTKSSREVEEQ 420
Query: 421 RVQNAGP----VASTSQESAVVDLESKDETPGFTVYVNRKPTSMAEVIKEIEAQFMTVCN 480
+ G +TS S V+ +++ R + EV+KEI+++F +
Sbjct: 421 YGRKKGVSFELEETTSTSSFDVESSKISSLSSLSIHATR---DLREVVKEIKSEFEIASS 480
Query: 481 SANEVSALLEARKAPYMTTSNELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDESGY 540
EV+ LLE K PY +N + +L+ + + S+RSS S+ +S T
Sbjct: 481 CGKEVALLLEVGKLPYQHKNNGVKV--ILSRIMYLVAPSTRSSHSQPRLSIRLTSRTRKM 540
Query: 541 ESTDDISEESSSFSPGHQSTLDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVKGE 600
+ + + + F+ STL++LYAWEKKLY+EV+ EK+R YE+KC +L+ D G
Sbjct: 541 AKSYNGQDVNGGFNGNLSSTLEKLYAWEKKLYKEVKDEEKLRAIYEEKCRRLKKMDSHGA 600
Query: 601 DPSSVEKTRSTMRDLHTQIKVSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKVMA 660
+ ++ TR+ +R L T+I V I SV++++ RI LRDEELQPQL +L+ GL RMW+ M
Sbjct: 601 ESIKIDATRAAIRKLLTKIDVCIRSVDSISSRIHKLRDEELQPQLIQLIHGLIRMWRSML 660
Query: 661 ECHQLQKLALDEAKLLLAGIPSKLDARKLSSSRVIEPNWLARASANLETELRNWRSCFES 720
CHQ Q A+ E+K+ R L ++ ++ + + A +LE ELR W F +
Sbjct: 661 RCHQKQFQAIRESKV-----------RSLKANTTLQNDSGSTAILDLEIELREWCISFNN 720
Query: 721 WIGSQRSYMHAITGWLLRCVN--SDSSDVTKPPFSPRRSNASALPIFGLCIQWKRLLDEI 734
W+ +Q+SY+ ++GWL +C++ +++D PFSP S A PIF +C W+ + I
Sbjct: 721 WVNTQKSYVQFLSGWLTKCLHYEPEATDDGIAPFSP--SQIGAPPIFIICKDWQEAMCRI 780
BLAST of CmaCh12G009000 vs. TAIR 10
Match:
AT4G35240.1 (Protein of unknown function (DUF630 and DUF632) )
HSP 1 Score: 212.2 bits (539), Expect = 1.5e-54
Identity = 229/806 (28.41%), Postives = 344/806 (42.68%), Query Frame = 0
Query: 1 MGCSMSKLEDEEAVKLCKDRKNFIKQAVEQRRRLACGHLAYIQSLKRVSTALREYVD--- 60
MGC+ SKL+D AV LC++R F++ A+ QR LA H+AY SL+ + +L +++
Sbjct: 1 MGCTSSKLDDLPAVALCRERCAFLEAAIHQRYALAESHVAYTHSLREIGHSLHLFINHHH 60
Query: 61 ----------GYEPR--------------------------------------------- 120
G PR
Sbjct: 61 RFVASGGANVGDSPRLNLPPQRKGDLDDEATNSPKKQKLASSHHNHNHAHSGSGSDSGHL 120
Query: 121 --------------ELLLDS-------------FITPPFTPV---KKTSPGLISITPRSF 180
+L LDS F P P+ + PG I+ P
Sbjct: 121 EFDSDSDEDEEDDDDLDLDSLHHHSPPHHHLGNFPIPESAPMGGYMEQQPGYINPYPNPD 180
Query: 181 PQLPIESKPNRVVKVNYLRSGG-NGAVSVEERPQSPEIVRV------QSYSPMHQY-GFD 240
S + +NY+++ +V E+RP SP+ V + Y P + Y G+
Sbjct: 181 MMGHPYSGGGSYMHMNYMKNKSMPPSVVYEQRPTSPQRVYIGESSSSYPYPPQNSYFGYS 240
Query: 241 GFFPMQSPPM--NSSFFSYSPNNRPNIPPPSPTPESSQWDFFWNPFSSLDNYGYPSNNGL 300
P P +SS + + +P PPPSP P S+ WDF NPF D Y P
Sbjct: 241 NPVPGPGPGYYGSSSASTTAAATKPPPPPPSP-PRSNGWDFL-NPF---DTYYPPYTPSR 300
Query: 301 DHMAMDDEIRGLRQVREEEGIPELEEDETEQEDNDNSYRWEGNSNRVNTMDDRTQTGQSC 360
D R++REEEGIP+LE+D++ E Y + G
Sbjct: 301 DS----------RELREEEGIPDLEDDDSHYEVVKEVYG-----------KPKFAAGGGH 360
Query: 361 CREEVLVEDVDEDEEDEDEDEDEDENEDEMNYGNEMGHELQGIRSRGNGKIDVSRVQNAG 420
V + E+ D+ G + G G + + +
Sbjct: 361 QPNPAAVHMMREESPSPPLDK-------------------SGASTSGGGDVGDASAYQSR 420
Query: 421 PVASTSQESAVVDLE------SKDETPGFTVYVNR------KPTSMAEVIKEIEAQFMTV 480
P S +E ++ +DE R P ++ EV KEIE QF+
Sbjct: 421 PSVSVEKEGMEYEVHVVEKKVVEDEERRSNATATRGGGGGGGPRAVPEVAKEIENQFVKA 480
Query: 481 CNSANEVSALLEARKAPYMTTSNELTAMKMLNPVALFRSASSRSSSSRFLISSSATKDES 540
S +E++ LLE K PY + A KML+ V ++S +SS S++A
Sbjct: 481 AESGSEIAKLLEVGKHPY---GRKHAASKMLHGVTPSLPSTSGGTSS----SAAAAVVPP 540
Query: 541 GYESTDDISEESSSFSPGHQSTLDRLYAWEKKLYQEVRSGEKIRIAYEKKCNQLRNQDVK 600
Y DI EE +S S STL +L+ WEKKLY EV++ EK+R+A+EKK +L+ D +
Sbjct: 541 TYA---DIEEELASRSRNLSSTLHKLHLWEKKLYHEVKAEEKLRLAHEKKLRKLKRLDQR 600
Query: 601 GEDPSSVEKTRSTMRDLHTQIKVSIHSVEAVAKRIETLRDEELQPQLQELVQGLARMWKV 660
G + V+KTR +RD+ T+I+++I V+ ++ I +RDE+L PQL L+QGL RMWK
Sbjct: 601 GAEAIKVDKTRKLVRDMSTKIRIAIQVVDKISVTINKIRDEDLWPQLNALIQGLTRMWKT 660
Query: 661 MAECHQLQKLALDEAKLLLAGIPSKLDARKLSSSRVIEPNWLARASANLETELRNWRSCF 695
M ECHQ Q A+ EA+ G+ ++KL + A++ L EL NW F
Sbjct: 661 MLECHQSQCQAIREAQ----GLGPIRASKKLGDEHL-------EATSLLGHELINWILGF 720
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q93YU8 | 3.7e-34 | 25.51 | Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV... | [more] |
A0A178VBJ0 | 1.3e-31 | 28.68 | Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q9AQW1 | 2.5e-30 | 24.58 | Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL... | [more] |
Match Name | E-value | Identity | Description | |
AT2G19090.1 | 2.0e-192 | 52.74 | Protein of unknown function (DUF630 and DUF632) | [more] |
AT4G30130.1 | 2.9e-180 | 51.34 | Protein of unknown function (DUF630 and DUF632) | [more] |
AT2G17110.1 | 6.0e-56 | 28.26 | Protein of unknown function (DUF630 and DUF632) | [more] |
AT1G77500.1 | 1.1e-54 | 28.23 | Protein of unknown function (DUF630 and DUF632) | [more] |
AT4G35240.1 | 1.5e-54 | 28.41 | Protein of unknown function (DUF630 and DUF632) | [more] |