CmaCh12G008640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G008640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Germin-like protein
Location	Cma_Chr12: 6431619 .. 6433530 (-)
RNA-Seq Expression	CmaCh12G008640
Synteny	CmaCh12G008640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGTCAATGCTCCCAAGAGACGTGAAAAAAAGGGAGGATCTGTGTCCAAAACTTCCTCAAGATAACAAGATGATGACAAAACCCATTGACTTCCCTTCATCTCTAAGAAGTGGCATATTTCTTGCCTTTCCCTCCCCTTTGCTCATACAATGCTGTCACCATTATTCTATTCATATTCATTTCTTGGCTTCAATTATATATTAACTTCCCCATCCACCACCTACCATACCCATCACTTCCTCCATTTTCTCATACTCTTTTCTTCTCAATCATGAAGCTACCTCTCCCTGCTCTGTTTGCTGCACCTCTTGCCTTCTTATTCGCCGTCGCCATCGCCGATCCCGACTTGCTTCAAGACGTTTGCGTCGCCGATCTCACTTCAGGTACCTACTTCAAGTGTTCTAGCTCTGTTCTTTCAAGTTCTTAGGTCTCCCCAATTCTCTAACAGTTGCATAATCATTGGTTTCTAATTTGGGGTTCTGGGTTAAGGTTGTGTGGTTCTAGAGTTGTTTTTTGTTTTCGCTCAAAATGTCTCGTAGTAATAGAAATGTTGTCAAGTTAGAAATGCGAACGATATTCCACAGCAAGAACGAGACGTTGCTCTCTTCTTCAAATCGGAGGTGAATTCGAACTACATTCTAACTTTGACAACATTGATATTGGAAAGTAAACAGAGGAAGAACACAAGATTCAATGATTCTTCTATGTTCTAATCCACGTGGAACAGTTTTCACATCCCTAACCTAACAATATCAAGCAAAATATGCAAGATTCAATGATTCTCCTGTGTTCTAATCCATGTAGAACAGTTCACATCCCTAACCTAACAATATCAAGCAAAATCTGCAAGATTCAATGATTCTCCTATGTTCTAATCCATGTAGAACAGTTTTCACATCCCTAACCTAACAATATCAAGCAAAATCTTCAAGATTCAAAGGTTCTCCTTTGTTCTAATCCATGTGGAACAGTTCTCACATCCCTAACTTAACAATATCAAGCAAAATCTTCAAGTTCAAGCTCAAACTAGGCAAGATCATGGCAGTTCCAAACAGTTTATTTTTCCAGATATTAACATTTGAATCAAAACAGGAATCAAAGTAAACGGATTCACCTGCAAGTCAAATTTCTCAGCGGACGATTTCTTCTTCAATGGATTGGCCAAAGCAGGGCTAACAAACAACACCCAAGGCTCGCGAGTAACTGGCGCCAATGTCCAATCTATCCCCGGCCTGAACACGCTCGGCGTTTCCCTAGCGCGGATCGACTACGCCCCCGGTGGCTTGAATCCACCTCACACACACCCGCGCGCCACCGAGATTGTGTTCGTCATCGAAGGCCAACTCGACGTCGGCTTCATAACCACCGCGAATGTCCTCGTCTCGAAGACGATCAAGACTGGCGAGATCTTCGTGTTCCCCAAGGGATTGGTCCACTTCCAGAAGAACAATGGAAAGGTTCCAGCGGCGGTGATTGCAGCGTTCAACAGTCAGTTGCCTGGTACTCAATCGATTGCAGCGACACTTTTCGCCGCATCTCCGCCGGTGCCGGATAACGTGTTGACGAAGGCGTTTCAAATAGGGACTAAAGAGGTTAAGAAGATCAAATCGAGACTTGCGCCAAAATAAGAGAGGCAAATCAATAGCAGTTTCCGTGAATCGAAATCGAAATCGAAGATTGTGTTTGGAATTGAGTTTGATTTGATTTGATTTTGATTTGGCTGTTGTGTTGTGTTTGTATTGTGATTTGTATCATTGCATTTCTGGGTTCCTTGGTTTCACTGATAATTTGAATAAGAATTGAGATTTGGGGATTTGTTCTTCATTTCTCTCTCCCTTCATTATTTTGGAATCATTTTTTTGATAATGTAGATTGTATAATATTTTTTATTCGAATCAATTTTCTTTTTA

mRNA sequence

TTTGGTCAATGCTCCCAAGAGACGTGAAAAAAAGGGAGGATCTGTGTCCAAAACTTCCTCAAGATAACAAGATGATGACAAAACCCATTGACTTCCCTTCATCTCTAAGAAGTGGCATATTTCTTGCCTTTCCCTCCCCTTTGCTCATACAATGCTGTCACCATTATTCTATTCATATTCATTTCTTGGCTTCAATTATATATTAACTTCCCCATCCACCACCTACCATACCCATCACTTCCTCCATTTTCTCATACTCTTTTCTTCTCAATCATGAAGCTACCTCTCCCTGCTCTGTTTGCTGCACCTCTTGCCTTCTTATTCGCCGTCGCCATCGCCGATCCCGACTTGCTTCAAGACGTTTGCGTCGCCGATCTCACTTCAGGAATCAAAGTAAACGGATTCACCTGCAAGTCAAATTTCTCAGCGGACGATTTCTTCTTCAATGGATTGGCCAAAGCAGGGCTAACAAACAACACCCAAGGCTCGCGAGTAACTGGCGCCAATGTCCAATCTATCCCCGGCCTGAACACGCTCGGCGTTTCCCTAGCGCGGATCGACTACGCCCCCGGTGGCTTGAATCCACCTCACACACACCCGCGCGCCACCGAGATTGTGTTCGTCATCGAAGGCCAACTCGACGTCGGCTTCATAACCACCGCGAATGTCCTCGTCTCGAAGACGATCAAGACTGGCGAGATCTTCGTGTTCCCCAAGGGATTGGTCCACTTCCAGAAGAACAATGGAAAGGTTCCAGCGGCGGTGATTGCAGCGTTCAACAGTCAGTTGCCTGGTACTCAATCGATTGCAGCGACACTTTTCGCCGCATCTCCGCCGGTGCCGGATAACGTGTTGACGAAGGCGTTTCAAATAGGGACTAAAGAGGTTAAGAAGATCAAATCGAGACTTGCGCCAAAATAAGAGAGGCAAATCAATAGCAGTTTCCGTGAATCGAAATCGAAATCGAAGATTGTGTTTGGAATTGAGTTTGATTTGATTTGATTTTGATTTGGCTGTTGTGTTGTGTTTGTATTGTGATTTGTATCATTGCATTTCTGGGTTCCTTGGTTTCACTGATAATTTGAATAAGAATTGAGATTTGGGGATTTGTTCTTCATTTCTCTCTCCCTTCATTATTTTGGAATCATTTTTTTGATAATGTAGATTGTATAATATTTTTTATTCGAATCAATTTTCTTTTTA

Coding sequence (CDS)

ATGAAGCTACCTCTCCCTGCTCTGTTTGCTGCACCTCTTGCCTTCTTATTCGCCGTCGCCATCGCCGATCCCGACTTGCTTCAAGACGTTTGCGTCGCCGATCTCACTTCAGGAATCAAAGTAAACGGATTCACCTGCAAGTCAAATTTCTCAGCGGACGATTTCTTCTTCAATGGATTGGCCAAAGCAGGGCTAACAAACAACACCCAAGGCTCGCGAGTAACTGGCGCCAATGTCCAATCTATCCCCGGCCTGAACACGCTCGGCGTTTCCCTAGCGCGGATCGACTACGCCCCCGGTGGCTTGAATCCACCTCACACACACCCGCGCGCCACCGAGATTGTGTTCGTCATCGAAGGCCAACTCGACGTCGGCTTCATAACCACCGCGAATGTCCTCGTCTCGAAGACGATCAAGACTGGCGAGATCTTCGTGTTCCCCAAGGGATTGGTCCACTTCCAGAAGAACAATGGAAAGGTTCCAGCGGCGGTGATTGCAGCGTTCAACAGTCAGTTGCCTGGTACTCAATCGATTGCAGCGACACTTTTCGCCGCATCTCCGCCGGTGCCGGATAACGTGTTGACGAAGGCGTTTCAAATAGGGACTAAAGAGGTTAAGAAGATCAAATCGAGACTTGCGCCAAAATAA

Protein sequence

MKLPLPALFAAPLAFLFAVAIADPDLLQDVCVADLTSGIKVNGFTCKSNFSADDFFFNGLAKAGLTNNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGFITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAATLFAASPPVPDNVLTKAFQIGTKEVKKIKSRLAPK

Homology

[Close]

BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.0e-83
Identity = 157/214 (73.36%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 3   LPLPALFAAPLAFLFAVAIA-DPDLLQDVCVADLTSGIKVNGFTCKSNFSADDFFFNGLA 62
           LP   +    LA L   + A DPDLLQD+CVADLTS +KVNGF CK+  + DDF+F GLA
Sbjct: 6   LPCAVVAVLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLA 65

Query: 63  KAGLTNNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQ 122
            AG TNNT GS VTGANV+ +PGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFV++G 
Sbjct: 66  AAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGT 125

Query: 123 LDVGFITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAAT 182
           LDVGFITTAN L +KTI  G++FVFP+GL+HFQKNNG  PAAVI+AFNSQLPGTQS+A T
Sbjct: 126 LDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMT 185

Query: 183 LFAASPPVPDNVLTKAFQIGTKEVKKIKSRLAPK 216
           LFAASP VPD VLTKAFQ+GTKEV+KIKSRLAPK
Sbjct: 186 LFAASPEVPDGVLTKAFQVGTKEVEKIKSRLAPK 219

[Close]

BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-79
Identity = 150/210 (71.43%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 9   FAAPLAFLFAVAIADPDLLQDVCVADLTSGIKVNGFTCK--SNFSADDFFFNGLAKAGLT 68
           F   L+    V   DPD LQD+CVAD TSGIKVNGFTCK  SN +A DFFF G+ K  + 
Sbjct: 9   FFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVV 68

Query: 69  NNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGF 128
           NNT GS VTGANV+ I GLNTLGVSLARIDYAPGGLNPPHTHPRATE++FV+EG+LDVGF
Sbjct: 69  NNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGF 128

Query: 129 ITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKV-PAAVIAAFNSQLPGTQSIAATLFAA 188
           ITTAN L +KT+K GE+FVFP+GL+H+QKNN K  PA+VI+AFNSQLPGTQSIAATLF A
Sbjct: 129 ITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTA 188

Query: 189 SPPVPDNVLTKAFQIGTKEVKKIKSRLAPK 216
           +P +PD+VLT  FQIGTKE++KIKS+ APK
Sbjct: 189 TPAIPDHVLTTTFQIGTKEIEKIKSKFAPK 218

[Close]

BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q9S8P4 (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78
Identity = 158/217 (72.81%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 1   MKLPLPALFAAPLAFLFAVAIADPDLLQDVCVADLTSGIKVNGFTCK--SNFSADDFFFN 60
           MKL +  L    LA       AD D LQD+CVAD  S I VNGF CK  SN +A+DFF N
Sbjct: 1   MKL-IAVLLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSN 60

Query: 61  GLAKAGLTNNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVI 120
            L K G TNNT GS VTGANVQ IPGLNTLGVS+ARIDYAPGGLNPPHTHPRATE+VFV+
Sbjct: 61  LLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVL 120

Query: 121 EGQLDVGFITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSI 180
           EGQLDVGFITT N L++KTI  GE FVFPKGLVHFQKNNG  PA VIA FNSQLPGT +I
Sbjct: 121 EGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNI 180

Query: 181 AATLFAASPPVPDNVLTKAFQIGTKEVKKIKSRLAPK 216
             TLF A+PPVPDNVLTKAFQIGTKEV+KIKS+ APK
Sbjct: 181 PLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAPK 216

[Close]

BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 4.3e-78
Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 17  FAVAIADPDLLQDVCVADLTSGIKVNGFTCK--SNFSADDFFFNGLAKAGLTNNTQGSRV 76
           F  + ADPD+LQD+CVADL SGIK+NGF CK  +  ++ DFF  GLAK GLTNNT G+ V
Sbjct: 18  FISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALV 77

Query: 77  TGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGFITTANVLV 136
           TGANV +IPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFV+EG LDVGF+TTAN L+
Sbjct: 78  TGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLI 137

Query: 137 SKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAATLFAASPPVPDNVL 196
           S+++K G++F FPKGLVHFQKNNG VPA+VIAAFNSQLPGTQS+ ATLF ++PPVPDN+L
Sbjct: 138 SQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNIL 197

Query: 197 TKAFQIGTKEVKKIKSRLAPK 216
            +AFQ     VK IKS+  PK
Sbjct: 198 AQAFQTSPGTVKHIKSKFQPK 218

[Close]

BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q9SPV5 (Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.3e-77
Identity = 145/208 (69.71%), Postives = 174/208 (83.65%), Query Frame = 0


Query: 13  LAFLFAVAI------ADPDLLQDVCVADLTSGIKVNGFTCKSNFSADDFFFNGLAKAGLT 72
           + FLFA++I      AD D+LQDVCVADL S +KVNGF CK+NF+A DF    ++K G T
Sbjct: 18  ILFLFAISIDRYCFAADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSFAISKPGAT 77

Query: 73  NNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGF 132
           NN  GS+VT ANV+ +PGLNTLGVSLARIDYAPGG+NPPHTHPRA+E+VFV+EG+LDVGF
Sbjct: 78  NNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGF 137

Query: 133 ITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAATLFAAS 192
           ITTANVLVSK I  GE+FVFP+GLVHFQKNNGK+PAAV++AFNSQLPGTQSI  TLF AS
Sbjct: 138 ITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGAS 197

Query: 193 PPVPDNVLTKAFQIGTKEVKKIKSRLAP 215
           P VPD+VL + FQI  ++V++IKS+ AP
Sbjct: 198 PTVPDDVLAQTFQINIEDVQQIKSKFAP 225

[Close]

BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 297.7 bits (761), Expect = 7.3e-81
Identity = 150/210 (71.43%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 9   FAAPLAFLFAVAIADPDLLQDVCVADLTSGIKVNGFTCK--SNFSADDFFFNGLAKAGLT 68
           F   L+    V   DPD LQD+CVAD TSGIKVNGFTCK  SN +A DFFF G+ K  + 
Sbjct: 9   FFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVV 68

Query: 69  NNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGF 128
           NNT GS VTGANV+ I GLNTLGVSLARIDYAPGGLNPPHTHPRATE++FV+EG+LDVGF
Sbjct: 69  NNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGF 128

Query: 129 ITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKV-PAAVIAAFNSQLPGTQSIAATLFAA 188
           ITTAN L +KT+K GE+FVFP+GL+H+QKNN K  PA+VI+AFNSQLPGTQSIAATLF A
Sbjct: 129 ITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTA 188

Query: 189 SPPVPDNVLTKAFQIGTKEVKKIKSRLAPK 216
           +P +PD+VLT  FQIGTKE++KIKS+ APK
Sbjct: 189 TPAIPDHVLTTTFQIGTKEIEKIKSKFAPK 218

[Close]

BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 292.4 bits (747), Expect = 3.1e-79
Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 17  FAVAIADPDLLQDVCVADLTSGIKVNGFTCK--SNFSADDFFFNGLAKAGLTNNTQGSRV 76
           F  + ADPD+LQD+CVADL SGIK+NGF CK  +  ++ DFF  GLAK GLTNNT G+ V
Sbjct: 18  FISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALV 77

Query: 77  TGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGFITTANVLV 136
           TGANV +IPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFV+EG LDVGF+TTAN L+
Sbjct: 78  TGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLI 137

Query: 137 SKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAATLFAASPPVPDNVL 196
           S+++K G++F FPKGLVHFQKNNG VPA+VIAAFNSQLPGTQS+ ATLF ++PPVPDN+L
Sbjct: 138 SQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNIL 197

Query: 197 TKAFQIGTKEVKKIKSRLAPK 216
            +AFQ     VK IKS+  PK
Sbjct: 198 AQAFQTSPGTVKHIKSKFQPK 218

[Close]

BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 281.2 bits (718), Expect = 7.1e-76
Identity = 140/217 (64.52%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 1   MKLPLPALFAAPLAFLFAVAIADPDLLQDVCVADLTSGIKVNGFTCKS--NFSADDFFFN 60
           M   +  + A     + ++   DPD LQD+CVAD + G K+NGF CK   N +  DFFF 
Sbjct: 2   MNSRISIIIALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFA 61

Query: 61  GLAKAGLTNNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVI 120
           G++K  + N+T GS VTGANV+ IPGLNTL VSLARIDYAPGGLNPPHTHPRATE+V+V+
Sbjct: 62  GISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVL 121

Query: 121 EGQLDVGFITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSI 180
           EG+L+VGFITTAN L +KTIK GE+FVFP+GLVHFQKNNGK PA+V++AFNSQLPGT S+
Sbjct: 122 EGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASV 181

Query: 181 AATLFAASPPVPDNVLTKAFQIGTKEVKKIKSRLAPK 216
           AATLFAA P +P++VLTK FQ+G+K V KIK RLA K
Sbjct: 182 AATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATK 218

[Close]

BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74
Identity = 135/181 (74.59%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 38  GIKVNGFTCK--SNFSADDFFFNGLAKAGLTNNTQGSRVTGANVQSIPGLNTLGVSLARI 97
           GIKVNGFTCK  SN +A DFFF G+ K  + NNT GS VTGANV+ I GLNTLGVSLARI
Sbjct: 9   GIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARI 68

Query: 98  DYAPGGLNPPHTHPRATEIVFVIEGQLDVGFITTANVLVSKTIKTGEIFVFPKGLVHFQK 157
           DYAPGGLNPPHTHPRATE++FV+EG+LDVGFITTAN L +KT+K GE+FVFP+GL+H+QK
Sbjct: 69  DYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQK 128

Query: 158 NNGKV-PAAVIAAFNSQLPGTQSIAATLFAASPPVPDNVLTKAFQIGTKEVKKIKSRLAP 216
           NN K  PA+VI+AFNSQLPGTQSIAATLF A+P +PD+VLT  FQIGTKE++KIKS+ AP
Sbjct: 129 NNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAP 188

[Close]

BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 7.8e-67
Identity = 121/199 (60.80%), Postives = 159/199 (79.90%), Query Frame = 0


Query: 19  VAIADPDLLQDVCVADLTSGIKVNGFTCK--SNFSADDFFFNGLAKAGLTNNTQGSRVTG 78
           VA+A  ++LQDVCVADL++ +KVNG+TCK  +  + +DF+F GLA    TN + GS VTG
Sbjct: 17  VAMASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTG 76

Query: 79  ANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGFITTANVLVSK 138
           ANV+ +PGLNTLG+S++RIDYAP GLNPPH HPRA+EI+FV+EGQL VGF+TTA  L++K
Sbjct: 77  ANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTTAGKLIAK 136

Query: 139 TIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAATLFAASPPVPDNVLTK 198
            +  G++F FPKGL+HFQKN    PA+V+AAF+SQLPGTQS+ A+LF A   +PD++L K
Sbjct: 137 NLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGA---LPDDILAK 196

Query: 199 AFQIGTKEVKKIKSRLAPK 216
           +FQ+  K+VKKIK R APK
Sbjct: 197 SFQLKHKQVKKIKLRYAPK 212

The following BLAST results are available for this feature:

BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6I544	2.0e-83	73.36	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]
Q9M263	1.0e-79	71.43	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
Q9S8P4	1.1e-78	72.81	Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2	[more]
P94014	4.3e-78	71.14	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
Q9SPV5	1.3e-77	69.71	Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1	[more]

BLAST of CmaCh12G008640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62020.1	7.3e-81	71.43	germin-like protein 10	[more]
AT1G09560.1	3.1e-79	71.14	germin-like protein 5	[more]
AT1G02335.1	7.1e-76	64.52	germin-like protein subfamily 2 member 2 precursor	[more]
AT3G62020.2	3.9e-74	74.59	germin-like protein 10	[more]
AT5G26700.1	7.8e-67	60.80	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 136..156 score: 55.37 coord: 169..184 score: 50.29 coord: 106..126 score: 63.79
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 58..206 e-value: 3.0E-36 score: 136.4
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 60..206 e-value: 2.5E-48 score: 163.5
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 22..214 e-value: 2.0E-81 score: 274.2
None	No IPR available	PANTHER	PTHR31238:SF199	GERMIN-LIKE PROTEIN	coord: 14..213
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 14..213
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 23..212 e-value: 6.63459E-88 score: 255.598
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 101..114
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 23..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008640.1	CmaCh12G008640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:2000280	regulation of root development
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0030145	manganese ion binding