CmaCh12G008430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G008430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	autophagy-related protein 11
Location	Cma_Chr12: 6224173 .. 6233270 (-)
RNA-Seq Expression	CmaCh12G008430
Synteny	CmaCh12G008430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGAGGAAGAAGCTGTTCTGTTAGACGGTGGTGGCCGCCATGGAAGCTTCCTTCATGCCTTTTTAATATTCAAAGCGACAGCGAAAGAGAGCGAACCAGAAGCGAATTTGTTGATGATTATCGAAAACACACGCACACACACACACACAAAAACGTTGATTTTATCTTCACATTTTTATAATTTTTCACAAAAGTATGATATTGCTACAAGGTTTCGTAGAGGTTTTCTTGTGCTGAGAATCAAAATTCTTGTACTTACTTCTTTCTACGTTATCGCTTCGGATTATCTTTATCTTCTTCTGTTGTTGGTCATTTTCGTCAACCCTAGAGTTTAGGCTTTTGGTTTTGATTCGTTCCTGTTTTCGTGTTCATCTGAGCAAGTTTGTAAAGTGGACGGATATCAAGATATCTTCGGCGAAAATTCTGGTTTTCGGGTTGGATTTTGTTTTGGCTAGGTCGGCGATTAGTAGGGTCTTACTGGGACCGGGTGGGACTTTCGAATCGAGCCGATTTTGCTAGTTCTTCTTGGTTTGTTGCTGGGGATTGGGGTCATCGATTGAAGGTTGTGGTTTGGTTTAGAATCGAGTAGTATTGAAGGTCGATAAACTTCGTAATTGATATTAGGTTTTTAGGGATTTTAGATCAAGCTACTTTAGCAGTGAAGTAGTGATTTGAGATTTCGGATCTAAGTTGAGTGTTAAGGTTTAAATGATGGACTTCTGAAGTCCAGCAGAAAGGGCGGGACATAATCTGGAAGGAAGAACAGCCGATTTGACTTTCCTTGCCGTGCCTCGGCCATTGACGACGGATAGGTTCTTCACGTTTGGGTTTGATACCTCTTTTGTGTGAAAGAAGGGTTTAATTTGGCCGTGGGAACCTGTGGTTGAGATTCTTCATTGTGGATAAGATGAGCTCAAGCGTGACAGATGCTGGTGCAAACAGCGGCAAATTGCTGGTTCATGTTTCTGAAAATGGACACTCCTTTCAGCTTGATTGTTATGAGGGTATGCTGGTTGAGGATGTGATGCGCTTGATTGAATCAGTCACGGGGATTAACTGCAATGATCAGTTTATTCTCTCATTGGATGTTAGGCTGGAATCTCAGCGACCCCTTTCTGTTTACAAGCTTCCAGCAGATGATCGGGAAGTTTTCTTGTTTGATCGATCCAGGCTACAAAGCAATGCACCGCCACCTCCACCGGAGCAGATTGATATCCTTGATATTGCAGAACCACCATCACCTTCAACTTCACAAGATTCCCATCCTTTAGATGATGCCTCGGACCCTGCTTTGAAGGCTTTGCCTTCTTATGAGAGGGAGTTTCGTTACCATTACCACAAGGCTCATACAATATATAGTAGTACGGTGATGAAGTTTGATTACTGTGAGAGGCTTTTAAGAGAGCAGAAGGTTCAAGAGAGAGCTTTAGAGGTTGCAAAGGGTAATTTGGATCAATACTTTAAAATGATTAATCAGAACTACACAGATTTCATGAGGCGTTATTCGCAGCAGCATCGGGTTCATACTGATCTGTTGGTTAACTTGGGTAGAGACATTGAGAAATTGCGGTCTGTTAAGCTTCATCCTGCCTTACAAACAGCGAATCACAAGTGCTTATTGGATTTTGTCAAGGAGGATAGTTTGCGGAAGTTAGCAGAAAATTGCAGCAGTTCGCACAGCCAGTTTGAGAACAAAGTTTTTCAATTCAAGGCAATGTTTAACGAGGTTAAGCGAAAAGTTGAAGATTTATTTTCCAGCAGGGCTTCTTTCTCTATCAAGAATTTGGAACTGAATATTAAGGAGCATCAGCGGTATATCAATGAACAGAAGAGTATAATGCAATCCTTGAGGTTAGCTTCTGTTTACTTATGCCATAACTCAAGCATGTTTACCTGTCTATTATAGTAGTTATTAATTGTCAAAGTGTATTTACAATGACTCTAAAATTTTATTTGTGCATAATAACGCAGCAAAGATGTTGATACTGTTAAGAAACTGGTGGATGATTGCCTATCTTGTCAGTTATCTTCCTCACTTCGCCCTCATGATGCGGTCTCGGCCCTAGGTCCTATGTATGATGTTCATGACAAGAATCATCTGCCAAGAATGCAAGCTTGTGATCGTGCAGTTTCCAAACTGCTTGATGTCTGTAAGGATAAAAAGATTCAAATGAACAACTTCTTGCACCATTACATGCAAAAGATTGCTTATAACTCTTACATCATCAAGGATGTCAAACTACAGTTTCCTGTTTTTAAAGAGGCAATGGGGCGTCAGGAGGACCTATTTATGGACCTAAAGTTGGTGCGAGGGATCGGTCCAGCCTATAGAGCTTGTCTTTCTGAAGTTGTGAGAAGGAAAGCCTGCATGAAGCTTTACATGGGTATGGCTGGTCAAATGGCTGAAAGGCTTGCAAGAAAGAGGGAGGATGAGGTTAGAAGACGTGAAATGTTTCTGACAGAGCATAGTGGATACTTTCCAAGAGATGTAATAGAATCCATGGGATTAAACGATATGCCTAACCCGTGTGATGTTCATATAACTCCTTATGACGACCGTTTAATTAACGTTGATATTTCGGACCTTGACCATTATGCTCCTGAGTACTTGTTAGGATTCCCTTCGAAAAGTGAGAAGCAAGGAGGCCCCAAGGATTCCTTTACGAAGTCAGTTGGAGCTTTGAGTTCTGTTGAGGCTGAAGAAATTTCGAAGGGCACCTTTGAGAGTTATGTCTCTGGGGAGCTTGCTGAAGGTTCTGAGTTAGTAGAGATTTCTGGAACCAGCAAGATGGAAGTTGAAAATGCAAAATTGAAAGCTGATCTTGCTTCTGCTTTAGCCTTTATCTGTTCATTCTCTCCCGAATGTGATTTAAATGATGACAGCAAAGTAGACAGTATCTTAAAGAATGCTGCTGAGAAAACAGCTGAAGCCTTGCATCTTAAAGATGAATATGGAAAACAACTTCAATTAATGCTTAAAACTAAGCAGATGCAGTGTGAATCATATGAAAGACGCATTAAAGAATTGGAACAAAGGCTGTCAGATCAGTATTTGCGGGGGCAAAATCTCTCAAATAATGATGTGTCTGATTTTTCAGTTTTGGCTGAAAAGAGTGATGATTGCAAGCCACGAGTTATTGGCTGTCTAGAATCCCCTGCACCTTGTATATCTACTACAGAGCCAATGGACGAGGTTTCTTGCATCTCTAATTCACTGGATGTGAAGCTGGGGCTTTTTGCTGGACAGCCGGGTAGAGCTCAAGAAGCAGTTGATGAAAATATGATGGATTCCCGTGGCGATCAGAACCCTCATTTGGATTCCTCAATGATGGAGCCAAATCGTGAAGAATTTCAAGACAATGATAAATATGTGAGAGATAAAGTAGGACAGATGGGAATATCTCTGACGAACAGTTCCACTGCTGAGAGCATGCCTCGGTCTCTGAATGTTTTACCGTGTGAAACAGTAGAAGATCCCAATTTGGAATCTAATCTTCAGAATGGCCTTCTGCTGGAGTTACAAGATGCACTTGCGGACAAGACTAATCTGTTGAATGAAACTGAGACAAAACTTAAAGATGCTATGGAGGAGGTTGCCTCACTGAAGATAGAGTTGGAAGCTAGTAGGAAGCTGCTTGATGAATCTCAGGTACTAATTTTATTGTTCCTTCTTCTATCTCTTCCGTTAAAGGTTTCTCTCCCTTGGACATCGTTTTTAACGAACGACCAATGCTTTGACAAACTTGCGTTCTATTTTTTACCTTTCCTTTGTCTTATAGCTTTCTCTTGTGCGTTTCTTTCCTTTATCCATCCATCCAACCATCTCCTTTCTTTTTATATGCATGGCTCCTCTAGCCTTCTTGTCTTGTTATGATTGAGCCTTGATTTACGTGAACATAAATGGACACAGATGGAGGTTAGATAAATAATAACTTTGAGGTTTGAACCAGATTTGTTCGATCACCTTACTAATTTATACTAAGGATTTTTTAAGCATATTAAATTAGCAGTATTATACTGGTTGTCAATGTTTTGTGACCAAGATCTAGCTCCTTAGGGAAATTTGTTAGAAGTCATTTTTTGAGTCACTTTTGACGATATTGGATATTTGTTTTACTCCACTCTCTTTCCTTGGAGTGTGGATAGATGCTAGCGAGTTCTGTTTAATTACTATTGCTAGTTGAGGGAAGGTGCCAAAATGTGCATTAGTTGTTGTCAATTTCTGTCAAGCGGTTTCCTTATAGGTTCCTGTATCATCTCCACTCTTACCTGGCATGACACTCGAGAAAAGACCCTTGCTAGTGCCTCTCTTAAGATCCGCAAATTATTAGATCAGTTCAATTCCATTTGAGATCTTGAGAGGGCTCATTTGATTTCGCACTAAATCTTTCATAGTAAGACTGACTAAAAGTTTTGGGTGGCTTACAAGGATGTGTTTTTCATGAACTAGTGATGGTTCTTGATGAAATATCTACGAAATTGGAACTGTCTCTTCCTTCATTGCATTTTTTTAAGTAGCTGCTGGAAACAGCTATTAGAAACGTTGGATATTTCATGGGTTTTCTCGAACCAGATTGGGGAAGGGAAGCAATGGTCCAGTTGTTTGTGGTCGCTTATCAATGGGAATTAACCCTATAGCTTTCGGTTCAACACTTGAAAAGCTTGTCAATGCTCCCTAATTGAAAATAAACAAGAGAACTTCTAGGGAAAAATTAGGCATTTGACCGACGTTTGGTTGTAACTATTCTATTTCTTATATACATGTGTCCAGTGAAGTTTTTCAGCAGTAGCATGGTTGTGTCTGGAGGATACCCTTTTAACTTTCCTTTTTCGTAGTGAAAGTGTCCAGCTGACTAGTTTTCTCCTCCTACAGGAAAATGAGGAATTAAGTAAACTTCATGATTACCTTTTGTCCGTGTGCTTTATTTTCTGGAACTGTGCCTGTGACTCCTTCAGAATCTTTATGGCAGGCGATCCCTAAATAAGAAATATAAATTTGGTGTAAACCAAAACATGAGTTAATCTTATTCATCAAGTAATCCAAAAGTACAAACGATAATTAGTATTTATATTATTTGATAGCCTAGCCTAGTCGTACAATTCACTTACTCAGATCCTATAATGGCATGTTTCAAATAACTAACGCTACTCCAAATAAATAGCCTTAATGACTAGATTACAACCAACCACCCAACTAACGTTTCAATACAACATCACCTACATCAAAGTTTCACAATGGTACTCCAAGCTACAACAGCTATCATATTTCCTCTGGTAACCATCCTTCTCACAAGTTTAAGTGTTCTGTTCCAAAGACCAGTTTCTTCTGTCTTAGGTTTCAACCCCCTTATTCCTCCCCTTTCCTGTGGCAAGGAGCCAATTCCTCCCAGTTGACGAGTTGACTCAATTTATCTTCATTGTTCCCTTCCCTAGGGGAATATCACAGAGAACAAGATATATTCAAAAGAGAGTTTTATCCTATCCAAATGGACCATAATTGATGAAGACACCAAGGATCAAGATTTACCCCTAAAATCTATTTTATGTCAGTGTATATTAATCCCAGATTCTTCCTCAAAAGTTCTGATGGTATGAAACAGCGAGATGCAGATCATTTTGGAAGGAAAATAAAACTGTATCATCTTCATATTATAGATGCATAATAGATAAACCAAGAGGCCCTTTACCTACTTTGAAACCCTTTGTCGTCCCTAAGAGATAATATTCTCTGCTCAAACAATCCATGACAATAATGAAAAAGGAGAGGTGAGAGTGGATCACCTTGGCAAAGATCTCAATGGGAAGATTTTTCCTCTAGGCTTTTCATTGATGATGATAGAGTACTTTGAAACTCCTTTAAGTGTATTGTACTGTACATTTTTGCAAAAGAGTTCAAATGATTCCGAATTATCTTCCAATGCTATTTGATTTCTCTCCCTTTAAATGACCGAGTGTGATAGCTGTGCTTGTGATACTTATCTTCAAATGTTCTGTTTTTTCTTGGTTCTTTTTTTCTATTGTTTGTTTTCTTCAGGAATCAATGGTTGGTACCTTAGTTTTGTTTGGTTGTTTCTTTGGTTTGGAGTGCTTGTATTGCTCTCTTTGGTTGGTTGCACTGTTATCGTTTATTTTTTTCTCACTCCCTATGAGAGTTTGTATCCTTGAACTTTGATATTCTTTTCATCTATCAATCAAAAGTTTGTTGTTAAGAAGAAAATTAACTCATATTTACCTGTTGAAAAAGTGGTTTATTTATTTATTTTTTATTTTTTCCTATCTTAGTTTTCATTGTCATGGTCAATGACTCTTTTTCCGGTCAAATGCAGATTTTCTTTCCAGGTTCTTATGTCGTAAATTATTCTTTATCCATCCTTGCAGATGAATTGTGCCCACTTGGAGAATTGTCTGCATGAAGCGAGGGAGGAGGCTCAAACTCATCTTTGTGCAGCTTCCCGTAGGGCTTCAGAGTATAATGCACTTCGTGCATCAGCTGTGAAAATGCGGGGCCATGTTGAAAGACTAAAAACTTATGTTTTTGCTCCAAGTGGAGTGGCTGCTTTTGCTCATTCCTTACGCACTTTAGCACAATCTTTAGCCAAGTAAGTTACTTGATTTTTTGCACAGTTGCTGATTTCCAAACCATTCCCCTTTACCCACATTAAAAAGAGAGGATCAAATGCAACCTTGTTTCTTGTCTTGTATTCTGTTGTAATCTGCCAATGAACGAATTTATGCTGTTTCAGTTTTTTTCTTTATATGTTTCTTATATGTTTAAATGCACTAGTAATATAGTTTAGGTTCTTGGATGATGAATCTGATCAAGCATATTTTCTTTCTCCGTCCTTTATGGGCTCTATTAATTTTACTTTTGCTATTAAATGGATAAACTATCATAAGGAACTTTGAAGGTAGCTTTCTGATGTTTGAATGACTTCTAGCCATATTGTCAGTTATTTATATAATGTATTACATGTCTAAGTCCACCGATAGCAAATATTGTCCTTTTTAGATTTTTCCTTTCGGGCTTCCCTCAATGTTTTAAAACGTATCGGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCCCTAACCGATGTGGGATCTCACAATGCACCTTCCTTGGGGGGCCAGCATACTCGTTGGTACACTGCTCGGTATCTAGCTCTAATACCATTTGTAACAGCCCAAGTCCACCGCTAGCAGATATTGTCCTTTAGGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTAAAATGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAACCGTTCTCCTCATATAAATTCCTTAAGAATCCTCTTAGTTACGAGATTAGTTCTTCTATGATCTAGGAAAAGAACTATAGAGAGATGGCTGGACTTGTAAATGTAACTTTTTCTATTTTCCATCAAGCTTTCATTCTGGATTCTAGAGATTTTCTTGTGTAAGTATCCATTTATGCAATGTTTTATCAGTTATTGATTTCATTAATGAAAACTAACCTGTAATTCTTTTAGTTCTGTTAGCGACAATGAAAACGATGGCACCAATGAATTCCGCCAATGCATCTGGGCTATAGCAGAGAGGGTCGGAATTTTGGTCAAAGAACGTGAAGAACTGCTTGAAAAATACCCGAAGCTTGAAGCTGCGAACGAACAACTTGTCAAAGAACTAGAAGAAAAGAAAGAGCTTGTTAAAACTTTGTACTCAAAGCATCAACTTGAGAAGCAGGTAAACCTCCGATATGATTTCCCTAAATACTCTGTAGGAATCCTATGTTAGGAATCATGACTCTTCACAATGGTATGATAGGGTCTATTTTGAGCCTAAGCTCTCATGGCTTTGCTTTGGGCTTTTCCAAAAGGCCTCCTCATACCAATGGACATGTATTCCTTACTTATAAACTAAATTAGCTAATGTGGGACTCCCATCCAACAATCCTCCCCACGAACAAAGTATATCATAGAGCCTCCCTTAAGGCCTATGTAGCTCTCGAATAGCCTCCCCTTAATCAAGGCTCGATTCCTTTCTCGGGAGCCCTCGAACAAATTACAATCTTTGTTCAACACTTGAGTCACTTTTGACTACACCTTCGAGGCTCACAACTTCTTTGTTCGGCATTTGAGGATTCTATTAACATGAATAAGTTTAGGGAACATGGATATCAATATTATCCACTTTGAGCATAAGCTCTCATGCTTTGCTTTAGGCTTCCCTAAAGGGCCTCATACCAATCGAGATATATTCCCTACTTATAAACGAATGATTATTCCCTAAATTAGCCAACTTGGGACGCCCTCCCAACAATCCTCGACATACTCCTTAAAAAATTTATAGATTTTAAGAATTGTTTGTATGATCCACCTACCTATACTGTTAAATATATCCTTGGTTTATGATTGTTGAGTTTTATGCAACCTCGATTTGAGCTTTGAAACAGGCAAACAAGGAAAAGATTTCATTTGGTCGCATGAAAGTCCACGAGATTGCTGCGTTTGTTCGGAATGCAGCTGGACATTACGAGGCAATCAATCGGAACTGCGCCAACTACTACCTGTCTGCTGAATCTGTGGCTTTATTTGCAGACAATCTCCTTACCCGGCCTAACCACATTGTTGGGCAGGTTGTCCACATTGAACGCCAGATCGTGAAACCATCGCCGCCTTCTCCTCGGCGTGATCACGGTAGGGTGGATCAAACTGATTGTGTGATCTCCGACTCGGGGACTGATAGGTTGACCTTGAATTCAGGTTTATCTTTGAACCCGTACAGTCTTCCCGTCGGATGTGAATATTTTATAGTAACCGTAGCGATGTTACCGGATACTGCTATTCATTCAACAGCTTCCTGATCTCCCTGCAAACAAGCGACTGACATGATGGAAGATCCCAAATGTAGATATTAATTACATTGAAGAACAATTGTTGGGAGGTGAACTTTTTTTTATTTTTCATTTTGTACAAATGATGGTGGATGAGCTTTTTAACAAACCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT

mRNA sequence

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGAGGAAGAAGCTGTTCTGTTAGACGGTGGTGGCCGCCATGGAAGCTTCCTTCATGCCTTTTTAATATTCAAAGCGACAGCGAAAGAGAGCGAACCAGAAGCGAATTTGTTGATGATTATCGAAAACACACGCACACACACACACACAAAAACGTTGATTTTATCTTCACATTTTTATAATTTTTCACAAAAGTATGATATTGCTACAAGGTTTCGTAGAGGTTTTCTTGTGCTGAGAATCAAAATTCTTGTACTTACTTCTTTCTACGTTATCGCTTCGGATTATCTTTATCTTCTTCTGTTGTTGGTCATTTTCGTCAACCCTAGAGTTTAGGCTTTTGGTTTTGATTCGTTCCTGTTTTCGTGTTCATCTGAGCAAGTTTGTAAAGTGGACGGATATCAAGATATCTTCGGCGAAAATTCTGGTTTTCGGGTTGGATTTTGTTTTGGCTAGGTCGGCGATTAGTAGGGTCTTACTGGGACCGGGTGGGACTTTCGAATCGAGCCGATTTTGCTAGTTCTTCTTGGTTTGTTGCTGGGGATTGGGGTCATCGATTGAAGGTTGTGGTTTGGTTTAGAATCGAGTAGTATTGAAGGTCGATAAACTTCGTAATTGATATTAGGTTTTTAGGGATTTTAGATCAAGCTACTTTAGCAGTGAAGTAGTGATTTGAGATTTCGGATCTAAGTTGAGTGTTAAGGTTTAAATGATGGACTTCTGAAGTCCAGCAGAAAGGGCGGGACATAATCTGGAAGGAAGAACAGCCGATTTGACTTTCCTTGCCGTGCCTCGGCCATTGACGACGGATAGGTTCTTCACGTTTGGGTTTGATACCTCTTTTGTGTGAAAGAAGGGTTTAATTTGGCCGTGGGAACCTGTGGTTGAGATTCTTCATTGTGGATAAGATGAGCTCAAGCGTGACAGATGCTGGTGCAAACAGCGGCAAATTGCTGGTTCATGTTTCTGAAAATGGACACTCCTTTCAGCTTGATTGTTATGAGGGTATGCTGGTTGAGGATGTGATGCGCTTGATTGAATCAGTCACGGGGATTAACTGCAATGATCAGTTTATTCTCTCATTGGATGTTAGGCTGGAATCTCAGCGACCCCTTTCTGTTTACAAGCTTCCAGCAGATGATCGGGAAGTTTTCTTGTTTGATCGATCCAGGCTACAAAGCAATGCACCGCCACCTCCACCGGAGCAGATTGATATCCTTGATATTGCAGAACCACCATCACCTTCAACTTCACAAGATTCCCATCCTTTAGATGATGCCTCGGACCCTGCTTTGAAGGCTTTGCCTTCTTATGAGAGGGAGTTTCGTTACCATTACCACAAGGCTCATACAATATATAGTAGTACGGTGATGAAGTTTGATTACTGTGAGAGGCTTTTAAGAGAGCAGAAGGTTCAAGAGAGAGCTTTAGAGGTTGCAAAGGGTAATTTGGATCAATACTTTAAAATGATTAATCAGAACTACACAGATTTCATGAGGCGTTATTCGCAGCAGCATCGGGTTCATACTGATCTGTTGGTTAACTTGGGTAGAGACATTGAGAAATTGCGGTCTGTTAAGCTTCATCCTGCCTTACAAACAGCGAATCACAAGTGCTTATTGGATTTTGTCAAGGAGGATAGTTTGCGGAAGTTAGCAGAAAATTGCAGCAGTTCGCACAGCCAGTTTGAGAACAAAGTTTTTCAATTCAAGGCAATGTTTAACGAGGTTAAGCGAAAAGTTGAAGATTTATTTTCCAGCAGGGCTTCTTTCTCTATCAAGAATTTGGAACTGAATATTAAGGAGCATCAGCGGTATATCAATGAACAGAAGAGTATAATGCAATCCTTGAGCAAAGATGTTGATACTGTTAAGAAACTGGTGGATGATTGCCTATCTTGTCAGTTATCTTCCTCACTTCGCCCTCATGATGCGGTCTCGGCCCTAGGTCCTATGTATGATGTTCATGACAAGAATCATCTGCCAAGAATGCAAGCTTGTGATCGTGCAGTTTCCAAACTGCTTGATGTCTGTAAGGATAAAAAGATTCAAATGAACAACTTCTTGCACCATTACATGCAAAAGATTGCTTATAACTCTTACATCATCAAGGATGTCAAACTACAGTTTCCTGTTTTTAAAGAGGCAATGGGGCGTCAGGAGGACCTATTTATGGACCTAAAGTTGGTGCGAGGGATCGGTCCAGCCTATAGAGCTTGTCTTTCTGAAGTTGTGAGAAGGAAAGCCTGCATGAAGCTTTACATGGGTATGGCTGGTCAAATGGCTGAAAGGCTTGCAAGAAAGAGGGAGGATGAGGTTAGAAGACGTGAAATGTTTCTGACAGAGCATAGTGGATACTTTCCAAGAGATGTAATAGAATCCATGGGATTAAACGATATGCCTAACCCGTGTGATGTTCATATAACTCCTTATGACGACCGTTTAATTAACGTTGATATTTCGGACCTTGACCATTATGCTCCTGAGTACTTGTTAGGATTCCCTTCGAAAAGTGAGAAGCAAGGAGGCCCCAAGGATTCCTTTACGAAGTCAGTTGGAGCTTTGAGTTCTGTTGAGGCTGAAGAAATTTCGAAGGGCACCTTTGAGAGTTATGTCTCTGGGGAGCTTGCTGAAGGTTCTGAGTTAGTAGAGATTTCTGGAACCAGCAAGATGGAAGTTGAAAATGCAAAATTGAAAGCTGATCTTGCTTCTGCTTTAGCCTTTATCTGTTCATTCTCTCCCGAATGTGATTTAAATGATGACAGCAAAGTAGACAGTATCTTAAAGAATGCTGCTGAGAAAACAGCTGAAGCCTTGCATCTTAAAGATGAATATGGAAAACAACTTCAATTAATGCTTAAAACTAAGCAGATGCAGTGTGAATCATATGAAAGACGCATTAAAGAATTGGAACAAAGGCTGTCAGATCAGTATTTGCGGGGGCAAAATCTCTCAAATAATGATGTGTCTGATTTTTCAGTTTTGGCTGAAAAGAGTGATGATTGCAAGCCACGAGTTATTGGCTGTCTAGAATCCCCTGCACCTTGTATATCTACTACAGAGCCAATGGACGAGGTTTCTTGCATCTCTAATTCACTGGATGTGAAGCTGGGGCTTTTTGCTGGACAGCCGGGTAGAGCTCAAGAAGCAGTTGATGAAAATATGATGGATTCCCGTGGCGATCAGAACCCTCATTTGGATTCCTCAATGATGGAGCCAAATCGTGAAGAATTTCAAGACAATGATAAATATGTGAGAGATAAAGTAGGACAGATGGGAATATCTCTGACGAACAGTTCCACTGCTGAGAGCATGCCTCGGTCTCTGAATGTTTTACCGTGTGAAACAGTAGAAGATCCCAATTTGGAATCTAATCTTCAGAATGGCCTTCTGCTGGAGTTACAAGATGCACTTGCGGACAAGACTAATCTGTTGAATGAAACTGAGACAAAACTTAAAGATGCTATGGAGGAGGTTGCCTCACTGAAGATAGAGTTGGAAGCTAGTAGGAAGCTGCTTGATGAATCTCAGATGAATTGTGCCCACTTGGAGAATTGTCTGCATGAAGCGAGGGAGGAGGCTCAAACTCATCTTTGTGCAGCTTCCCGTAGGGCTTCAGAGTATAATGCACTTCGTGCATCAGCTGTGAAAATGCGGGGCCATGTTGAAAGACTAAAAACTTATGTTTTTGCTCCAAGTGGAGTGGCTGCTTTTGCTCATTCCTTACGCACTTTAGCACAATCTTTAGCCAATTCTGTTAGCGACAATGAAAACGATGGCACCAATGAATTCCGCCAATGCATCTGGGCTATAGCAGAGAGGGTCGGAATTTTGGTCAAAGAACGTGAAGAACTGCTTGAAAAATACCCGAAGCTTGAAGCTGCGAACGAACAACTTGTCAAAGAACTAGAAGAAAAGAAAGAGCTTGCAAACAAGGAAAAGATTTCATTTGGTCGCATGAAAGTCCACGAGATTGCTGCGTTTGTTCGGAATGCAGCTGGACATTACGAGGCAATCAATCGGAACTGCGCCAACTACTACCTGTCTGCTGAATCTGTGGCTTTATTTGCAGACAATCTCCTTACCCGGCCTAACCACATTGTTGGGCAGGTTGTCCACATTGAACGCCAGATCGTGAAACCATCGCCGCCTTCTCCTCGGCGTGATCACGGTAGGGTGGATCAAACTGATTGTGTGATCTCCGACTCGGGGACTGATAGGTTGACCTTGAATTCAGGTTTATCTTTGAACCCGTACAGTCTTCCCGTCGGATGTGAATATTTTATAGTAACCGTAGCGATGTTACCGGATACTGCTATTCATTCAACAGCTTCCTGATCTCCCTGCAAACAAGCGACTGACATGATGGAAGATCCCAAATGTAGATATTAATTACATTGAAGAACAATTGTTGGGAGGTGAACTTTTTTTTATTTTTCATTTTGTACAAATGATGGTGGATGAGCTTTTTAACAAACCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT

Coding sequence (CDS)

ATGAGCTCAAGCGTGACAGATGCTGGTGCAAACAGCGGCAAATTGCTGGTTCATGTTTCTGAAAATGGACACTCCTTTCAGCTTGATTGTTATGAGGGTATGCTGGTTGAGGATGTGATGCGCTTGATTGAATCAGTCACGGGGATTAACTGCAATGATCAGTTTATTCTCTCATTGGATGTTAGGCTGGAATCTCAGCGACCCCTTTCTGTTTACAAGCTTCCAGCAGATGATCGGGAAGTTTTCTTGTTTGATCGATCCAGGCTACAAAGCAATGCACCGCCACCTCCACCGGAGCAGATTGATATCCTTGATATTGCAGAACCACCATCACCTTCAACTTCACAAGATTCCCATCCTTTAGATGATGCCTCGGACCCTGCTTTGAAGGCTTTGCCTTCTTATGAGAGGGAGTTTCGTTACCATTACCACAAGGCTCATACAATATATAGTAGTACGGTGATGAAGTTTGATTACTGTGAGAGGCTTTTAAGAGAGCAGAAGGTTCAAGAGAGAGCTTTAGAGGTTGCAAAGGGTAATTTGGATCAATACTTTAAAATGATTAATCAGAACTACACAGATTTCATGAGGCGTTATTCGCAGCAGCATCGGGTTCATACTGATCTGTTGGTTAACTTGGGTAGAGACATTGAGAAATTGCGGTCTGTTAAGCTTCATCCTGCCTTACAAACAGCGAATCACAAGTGCTTATTGGATTTTGTCAAGGAGGATAGTTTGCGGAAGTTAGCAGAAAATTGCAGCAGTTCGCACAGCCAGTTTGAGAACAAAGTTTTTCAATTCAAGGCAATGTTTAACGAGGTTAAGCGAAAAGTTGAAGATTTATTTTCCAGCAGGGCTTCTTTCTCTATCAAGAATTTGGAACTGAATATTAAGGAGCATCAGCGGTATATCAATGAACAGAAGAGTATAATGCAATCCTTGAGCAAAGATGTTGATACTGTTAAGAAACTGGTGGATGATTGCCTATCTTGTCAGTTATCTTCCTCACTTCGCCCTCATGATGCGGTCTCGGCCCTAGGTCCTATGTATGATGTTCATGACAAGAATCATCTGCCAAGAATGCAAGCTTGTGATCGTGCAGTTTCCAAACTGCTTGATGTCTGTAAGGATAAAAAGATTCAAATGAACAACTTCTTGCACCATTACATGCAAAAGATTGCTTATAACTCTTACATCATCAAGGATGTCAAACTACAGTTTCCTGTTTTTAAAGAGGCAATGGGGCGTCAGGAGGACCTATTTATGGACCTAAAGTTGGTGCGAGGGATCGGTCCAGCCTATAGAGCTTGTCTTTCTGAAGTTGTGAGAAGGAAAGCCTGCATGAAGCTTTACATGGGTATGGCTGGTCAAATGGCTGAAAGGCTTGCAAGAAAGAGGGAGGATGAGGTTAGAAGACGTGAAATGTTTCTGACAGAGCATAGTGGATACTTTCCAAGAGATGTAATAGAATCCATGGGATTAAACGATATGCCTAACCCGTGTGATGTTCATATAACTCCTTATGACGACCGTTTAATTAACGTTGATATTTCGGACCTTGACCATTATGCTCCTGAGTACTTGTTAGGATTCCCTTCGAAAAGTGAGAAGCAAGGAGGCCCCAAGGATTCCTTTACGAAGTCAGTTGGAGCTTTGAGTTCTGTTGAGGCTGAAGAAATTTCGAAGGGCACCTTTGAGAGTTATGTCTCTGGGGAGCTTGCTGAAGGTTCTGAGTTAGTAGAGATTTCTGGAACCAGCAAGATGGAAGTTGAAAATGCAAAATTGAAAGCTGATCTTGCTTCTGCTTTAGCCTTTATCTGTTCATTCTCTCCCGAATGTGATTTAAATGATGACAGCAAAGTAGACAGTATCTTAAAGAATGCTGCTGAGAAAACAGCTGAAGCCTTGCATCTTAAAGATGAATATGGAAAACAACTTCAATTAATGCTTAAAACTAAGCAGATGCAGTGTGAATCATATGAAAGACGCATTAAAGAATTGGAACAAAGGCTGTCAGATCAGTATTTGCGGGGGCAAAATCTCTCAAATAATGATGTGTCTGATTTTTCAGTTTTGGCTGAAAAGAGTGATGATTGCAAGCCACGAGTTATTGGCTGTCTAGAATCCCCTGCACCTTGTATATCTACTACAGAGCCAATGGACGAGGTTTCTTGCATCTCTAATTCACTGGATGTGAAGCTGGGGCTTTTTGCTGGACAGCCGGGTAGAGCTCAAGAAGCAGTTGATGAAAATATGATGGATTCCCGTGGCGATCAGAACCCTCATTTGGATTCCTCAATGATGGAGCCAAATCGTGAAGAATTTCAAGACAATGATAAATATGTGAGAGATAAAGTAGGACAGATGGGAATATCTCTGACGAACAGTTCCACTGCTGAGAGCATGCCTCGGTCTCTGAATGTTTTACCGTGTGAAACAGTAGAAGATCCCAATTTGGAATCTAATCTTCAGAATGGCCTTCTGCTGGAGTTACAAGATGCACTTGCGGACAAGACTAATCTGTTGAATGAAACTGAGACAAAACTTAAAGATGCTATGGAGGAGGTTGCCTCACTGAAGATAGAGTTGGAAGCTAGTAGGAAGCTGCTTGATGAATCTCAGATGAATTGTGCCCACTTGGAGAATTGTCTGCATGAAGCGAGGGAGGAGGCTCAAACTCATCTTTGTGCAGCTTCCCGTAGGGCTTCAGAGTATAATGCACTTCGTGCATCAGCTGTGAAAATGCGGGGCCATGTTGAAAGACTAAAAACTTATGTTTTTGCTCCAAGTGGAGTGGCTGCTTTTGCTCATTCCTTACGCACTTTAGCACAATCTTTAGCCAATTCTGTTAGCGACAATGAAAACGATGGCACCAATGAATTCCGCCAATGCATCTGGGCTATAGCAGAGAGGGTCGGAATTTTGGTCAAAGAACGTGAAGAACTGCTTGAAAAATACCCGAAGCTTGAAGCTGCGAACGAACAACTTGTCAAAGAACTAGAAGAAAAGAAAGAGCTTGCAAACAAGGAAAAGATTTCATTTGGTCGCATGAAAGTCCACGAGATTGCTGCGTTTGTTCGGAATGCAGCTGGACATTACGAGGCAATCAATCGGAACTGCGCCAACTACTACCTGTCTGCTGAATCTGTGGCTTTATTTGCAGACAATCTCCTTACCCGGCCTAACCACATTGTTGGGCAGGTTGTCCACATTGAACGCCAGATCGTGAAACCATCGCCGCCTTCTCCTCGGCGTGATCACGGTAGGGTGGATCAAACTGATTGTGTGATCTCCGACTCGGGGACTGATAGGTTGACCTTGAATTCAGGTTTATCTTTGAACCCGTACAGTCTTCCCGTCGGATGTGAATATTTTATAGTAACCGTAGCGATGTTACCGGATACTGCTATTCATTCAACAGCTTCCTGA

Protein sequence

MSSSVTDAGANSGKLLVHVSENGHSFQLDCYEGMLVEDVMRLIESVTGINCNDQFILSLDVRLESQRPLSVYKLPADDREVFLFDRSRLQSNAPPPPPEQIDILDIAEPPSPSTSQDSHPLDDASDPALKALPSYEREFRYHYHKAHTIYSSTVMKFDYCERLLREQKVQERALEVAKGNLDQYFKMINQNYTDFMRRYSQQHRVHTDLLVNLGRDIEKLRSVKLHPALQTANHKCLLDFVKEDSLRKLAENCSSSHSQFENKVFQFKAMFNEVKRKVEDLFSSRASFSIKNLELNIKEHQRYINEQKSIMQSLSKDVDTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDVHDKNHLPRMQACDRAVSKLLDVCKDKKIQMNNFLHHYMQKIAYNSYIIKDVKLQFPVFKEAMGRQEDLFMDLKLVRGIGPAYRACLSEVVRRKACMKLYMGMAGQMAERLARKREDEVRRREMFLTEHSGYFPRDVIESMGLNDMPNPCDVHITPYDDRLINVDISDLDHYAPEYLLGFPSKSEKQGGPKDSFTKSVGALSSVEAEEISKGTFESYVSGELAEGSELVEISGTSKMEVENAKLKADLASALAFICSFSPECDLNDDSKVDSILKNAAEKTAEALHLKDEYGKQLQLMLKTKQMQCESYERRIKELEQRLSDQYLRGQNLSNNDVSDFSVLAEKSDDCKPRVIGCLESPAPCISTTEPMDEVSCISNSLDVKLGLFAGQPGRAQEAVDENMMDSRGDQNPHLDSSMMEPNREEFQDNDKYVRDKVGQMGISLTNSSTAESMPRSLNVLPCETVEDPNLESNLQNGLLLELQDALADKTNLLNETETKLKDAMEEVASLKIELEASRKLLDESQMNCAHLENCLHEAREEAQTHLCAASRRASEYNALRASAVKMRGHVERLKTYVFAPSGVAAFAHSLRTLAQSLANSVSDNENDGTNEFRQCIWAIAERVGILVKEREELLEKYPKLEAANEQLVKELEEKKELANKEKISFGRMKVHEIAAFVRNAAGHYEAINRNCANYYLSAESVALFADNLLTRPNHIVGQVVHIERQIVKPSPPSPRRDHGRVDQTDCVISDSGTDRLTLNSGLSLNPYSLPVGCEYFIVTVAMLPDTAIHSTAS

Homology

[Close]

BLAST of CmaCh12G008430 vs. ExPASy Swiss-Prot
Match: Q9SUG7 (Autophagy-related protein 11 OS=Arabidopsis thaliana OX=3702 GN=ATG11 PE=1 SV=1)

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 702/1166 (60.21%), Postives = 881/1166 (75.56%), Query Frame = 0


Query: 1    MSSSVTDAGANSGKLLVHVSENGHSFQLDCYEGMLVEDVMRLIESVTGINCNDQFILSLD 60
            MS S T++ A+ GKLL+ V+ENGHSF+  C E   VE VMR +ESV+GI  +DQ +LSLD
Sbjct: 1    MSGSFTESFADDGKLLLCVAENGHSFEFQCSETTSVESVMRFVESVSGIALSDQLLLSLD 60

Query: 61   VRLESQRPLSVYKLPADDREVFLFDRSRLQSNAPPPPPEQIDILDIAEPPSPSTSQDSHP 120
            ++LE Q+ LS + LPA DREVF+F+++ LQSN+ PP PE +D+ D+A+   P++  + HP
Sbjct: 61   MKLEPQKLLSAFGLPASDREVFVFNKAMLQSNSHPPSPEDVDLQDVADALPPASLHEHHP 120

Query: 121  LDDASDPALKALPSYEREFRYHYHKAHTIYSSTVMKFDYCERLLREQKVQERALEVAKGN 180
            LDDASDPALKALP YER+FRYH+HK  TIY+ TV+K + CERL REQKVQ+RA+EVA  N
Sbjct: 121  LDDASDPALKALPLYERQFRYHFHKGRTIYNCTVVKHENCERLTREQKVQQRAVEVATRN 180

Query: 181  LDQYFKMINQNYTDFMRRYSQQHRVHTDLLVNLGRDIEKLRSVKLHPALQTANHKCLLDF 240
            L+QY+++I QN+ +FM+RY  QHR+H+DLL+N GRDIEKLRS K+HP LQT + KCLLDF
Sbjct: 181  LEQYYRVIYQNFLEFMKRYKHQHRLHSDLLMNFGRDIEKLRSAKIHPYLQTESRKCLLDF 240

Query: 241  VKEDSLRKLAENCSSSHSQFENKVFQFKAMFNEVKRKVEDLFSSRASFSIKNLELNIKEH 300
            VKED+L+K  ENC+SSH QFENK+ QF+ MF EVKRKVE+LF+ RAS S+KNLE+ +K+H
Sbjct: 241  VKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSMKNLEVTVKDH 300

Query: 301  QRYINEQKSIMQSLSKDVDTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDVHDKNHLPR 360
            +R+I+E+KSIMQSLSKDV+TVKKLVDDC+S Q+SSSLRPHDAVSALGPMY+VHDKNHLP+
Sbjct: 301  ERFIDEEKSIMQSLSKDVNTVKKLVDDCMSSQVSSSLRPHDAVSALGPMYEVHDKNHLPK 360

Query: 361  MQACDRAVSKLLDVCKDKKIQMNNFLHHYMQKIAYNSYIIKDVKLQFPVFKEAMGRQEDL 420
            MQAC  ++S+LLD CK+KK +MNNF+H YMQKI Y +YIIKD KLQFPVF+EAM RQ+DL
Sbjct: 361  MQACYNSISELLDFCKNKKNEMNNFVHGYMQKITYVTYIIKDAKLQFPVFREAMVRQDDL 420

Query: 421  FMDLKLVRGIGPAYRACLSEVVRRKACMKLYMGMAGQMAERLARKREDEVRRREMFLTEH 480
            F DLKLVRG+GPAYRACL+EVVRRKA MKLYMGMAGQ+AE+LA KRE EVR+RE FL  H
Sbjct: 421  FADLKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLAMKRETEVRKREEFLKTH 480

Query: 481  SGYFPRDVIESMGLNDMPNPCDVHITPYDDRLINVDISDLDHYAPEYLLGFPSKSEKQGG 540
              + PRDV+ SMGL D P  CDV++ PYD  L+N++ISD+D YAPE+L+G  SK      
Sbjct: 481  GPFVPRDVLASMGLYDTPTQCDVNVAPYDTSLLNIEISDVDRYAPEFLVGLHSKI---AS 540

Query: 541  PKDSFTKSVGALSSVEAEEISKGTFESYVSGELAEGSELVEISGTSKMEVENAKLKADLA 600
             K S T S  +  S E EEI   TF+     ++   SEL+EI+GTSKMEVENAKLKADLA
Sbjct: 541  LKSSLTMSGDSSLSAEPEEIGIDTFDKDNFDDILAASELIEIAGTSKMEVENAKLKADLA 600

Query: 601  SALAFICSFSP--ECDLNDDSKVDSILKNAAEKTAEALHLKDEYGKQLQLMLKTKQMQCE 660
            SA++ ICS  P  E ++ D+S+V+++LKNAA+KTAEAL  KDEY K L LMLK KQM C+
Sbjct: 601  SAISRICSLGPQFEYEVLDESEVENVLKNAADKTAEALQAKDEYEKHLLLMLKEKQMHCD 660

Query: 661  SYERRIKELEQRLSDQYLRGQNLSNNDVSDFSVLAEKSDDCKPRVIGCLESPAPCISTTE 720
            SYE+RI+ELEQRLSD+YL+GQ  +N DVS  +++ EK  + K      +E     +S +E
Sbjct: 661  SYEKRIRELEQRLSDEYLQGQRHNNKDVSGLNLMHEKVSEYKAEASSDVEGNKTHVSGSE 720

Query: 721  PMDEVSCISNSLDVKLGLFAGQPGRAQEAVDENMMDSRGDQNPHLDSSMMEPNREEFQDN 780
            PMDEVSC+SN       L + QP +A+E +DENM+DS    +  LDSSM+E      Q+N
Sbjct: 721  PMDEVSCVSN-------LTSKQPCKAREGMDENMVDSSQVLSQPLDSSMLESQ----QNN 780

Query: 781  DKYVRD-KVGQMGISLTNSSTAESMPRSLNVLPCETVEDPNLESNLQNGLLLELQDALAD 840
            +K  +D + G+MG+ L+NSSTAES  +SL+           L++     ++LEL++ L +
Sbjct: 781  EKGGKDSEAGEMGVFLSNSSTAESPQKSLD---DNVATGRGLDAKDSGDIILELRNELME 840

Query: 841  KTNLLNETETKLKDAMEEVASLKIELEASRKLLDESQMNCAHLENCLHEAREEAQTHLCA 900
            K+N L+E E+KL  AMEEV++L  ELE ++KLL+ESQMNCAHLENCLHEAREEAQTHLCA
Sbjct: 841  KSNKLSEMESKLNGAMEEVSNLSRELETNQKLLEESQMNCAHLENCLHEAREEAQTHLCA 900

Query: 901  ASRRASEYNALRASAVKMRGHVERLKTYVFAPSGVAAFAHSLRTLAQSLANSVSDNENDG 960
            A RRAS+Y ALRASAVKMRG  ER ++ V A SG+A FA SLRTLAQ+LANSV++NE+DG
Sbjct: 901  ADRRASQYTALRASAVKMRGLFERFRSSVCAGSGIADFADSLRTLAQALANSVNENEDDG 960

Query: 961  TNEFRQCIWAIAERVGILVKEREELLEKYPKLEAANEQLVKELEEKKEL----------- 1020
            T EFR+CI  +A++V  L K REELLEK   LEA +EQ  K+LEEKKEL           
Sbjct: 961  TTEFRKCIRVLADKVSFLSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLYTKHQLG 1020

Query: 1021 --ANKEKISFGRMKVHEIAAFVRNAAGHYEAINRNCANYYLSAESVALFADNLLTRPNHI 1080
              ANKEKISFGR++VHEIAAFV N AGHYEAINRNC NYYLS+ES ALF D+L +RP +I
Sbjct: 1021 KQANKEKISFGRLEVHEIAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPSRPTYI 1080

Query: 1081 VGQVVHIERQIVK--------PSPPSPRRDHGRVDQTDCVISDSGTDRLTLNSGLSLNPY 1140
            VGQ+VHIERQIVK         SP + +  H   DQ    ++ S     T ++  + NPY
Sbjct: 1081 VGQIVHIERQIVKLPSQLSASASPEAGKTHHLCSDQGSRTLASSSISTST-SATTTSNPY 1140

Query: 1141 SLPVGCEYFIVTVAMLPDTAIHSTAS 1143
             L  GCEYFIVT+AMLPDTAIH  AS
Sbjct: 1141 GLSSGCEYFIVTIAMLPDTAIHQQAS 1148

[Close]

BLAST of CmaCh12G008430 vs. TAIR 10
Match: AT4G30790.1 (INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). )

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 702/1166 (60.21%), Postives = 881/1166 (75.56%), Query Frame = 0


Query: 1    MSSSVTDAGANSGKLLVHVSENGHSFQLDCYEGMLVEDVMRLIESVTGINCNDQFILSLD 60
            MS S T++ A+ GKLL+ V+ENGHSF+  C E   VE VMR +ESV+GI  +DQ +LSLD
Sbjct: 1    MSGSFTESFADDGKLLLCVAENGHSFEFQCSETTSVESVMRFVESVSGIALSDQLLLSLD 60

Query: 61   VRLESQRPLSVYKLPADDREVFLFDRSRLQSNAPPPPPEQIDILDIAEPPSPSTSQDSHP 120
            ++LE Q+ LS + LPA DREVF+F+++ LQSN+ PP PE +D+ D+A+   P++  + HP
Sbjct: 61   MKLEPQKLLSAFGLPASDREVFVFNKAMLQSNSHPPSPEDVDLQDVADALPPASLHEHHP 120

Query: 121  LDDASDPALKALPSYEREFRYHYHKAHTIYSSTVMKFDYCERLLREQKVQERALEVAKGN 180
            LDDASDPALKALP YER+FRYH+HK  TIY+ TV+K + CERL REQKVQ+RA+EVA  N
Sbjct: 121  LDDASDPALKALPLYERQFRYHFHKGRTIYNCTVVKHENCERLTREQKVQQRAVEVATRN 180

Query: 181  LDQYFKMINQNYTDFMRRYSQQHRVHTDLLVNLGRDIEKLRSVKLHPALQTANHKCLLDF 240
            L+QY+++I QN+ +FM+RY  QHR+H+DLL+N GRDIEKLRS K+HP LQT + KCLLDF
Sbjct: 181  LEQYYRVIYQNFLEFMKRYKHQHRLHSDLLMNFGRDIEKLRSAKIHPYLQTESRKCLLDF 240

Query: 241  VKEDSLRKLAENCSSSHSQFENKVFQFKAMFNEVKRKVEDLFSSRASFSIKNLELNIKEH 300
            VKED+L+K  ENC+SSH QFENK+ QF+ MF EVKRKVE+LF+ RAS S+KNLE+ +K+H
Sbjct: 241  VKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSMKNLEVTVKDH 300

Query: 301  QRYINEQKSIMQSLSKDVDTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDVHDKNHLPR 360
            +R+I+E+KSIMQSLSKDV+TVKKLVDDC+S Q+SSSLRPHDAVSALGPMY+VHDKNHLP+
Sbjct: 301  ERFIDEEKSIMQSLSKDVNTVKKLVDDCMSSQVSSSLRPHDAVSALGPMYEVHDKNHLPK 360

Query: 361  MQACDRAVSKLLDVCKDKKIQMNNFLHHYMQKIAYNSYIIKDVKLQFPVFKEAMGRQEDL 420
            MQAC  ++S+LLD CK+KK +MNNF+H YMQKI Y +YIIKD KLQFPVF+EAM RQ+DL
Sbjct: 361  MQACYNSISELLDFCKNKKNEMNNFVHGYMQKITYVTYIIKDAKLQFPVFREAMVRQDDL 420

Query: 421  FMDLKLVRGIGPAYRACLSEVVRRKACMKLYMGMAGQMAERLARKREDEVRRREMFLTEH 480
            F DLKLVRG+GPAYRACL+EVVRRKA MKLYMGMAGQ+AE+LA KRE EVR+RE FL  H
Sbjct: 421  FADLKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLAMKRETEVRKREEFLKTH 480

Query: 481  SGYFPRDVIESMGLNDMPNPCDVHITPYDDRLINVDISDLDHYAPEYLLGFPSKSEKQGG 540
              + PRDV+ SMGL D P  CDV++ PYD  L+N++ISD+D YAPE+L+G  SK      
Sbjct: 481  GPFVPRDVLASMGLYDTPTQCDVNVAPYDTSLLNIEISDVDRYAPEFLVGLHSKI---AS 540

Query: 541  PKDSFTKSVGALSSVEAEEISKGTFESYVSGELAEGSELVEISGTSKMEVENAKLKADLA 600
             K S T S  +  S E EEI   TF+     ++   SEL+EI+GTSKMEVENAKLKADLA
Sbjct: 541  LKSSLTMSGDSSLSAEPEEIGIDTFDKDNFDDILAASELIEIAGTSKMEVENAKLKADLA 600

Query: 601  SALAFICSFSP--ECDLNDDSKVDSILKNAAEKTAEALHLKDEYGKQLQLMLKTKQMQCE 660
            SA++ ICS  P  E ++ D+S+V+++LKNAA+KTAEAL  KDEY K L LMLK KQM C+
Sbjct: 601  SAISRICSLGPQFEYEVLDESEVENVLKNAADKTAEALQAKDEYEKHLLLMLKEKQMHCD 660

Query: 661  SYERRIKELEQRLSDQYLRGQNLSNNDVSDFSVLAEKSDDCKPRVIGCLESPAPCISTTE 720
            SYE+RI+ELEQRLSD+YL+GQ  +N DVS  +++ EK  + K      +E     +S +E
Sbjct: 661  SYEKRIRELEQRLSDEYLQGQRHNNKDVSGLNLMHEKVSEYKAEASSDVEGNKTHVSGSE 720

Query: 721  PMDEVSCISNSLDVKLGLFAGQPGRAQEAVDENMMDSRGDQNPHLDSSMMEPNREEFQDN 780
            PMDEVSC+SN       L + QP +A+E +DENM+DS    +  LDSSM+E      Q+N
Sbjct: 721  PMDEVSCVSN-------LTSKQPCKAREGMDENMVDSSQVLSQPLDSSMLESQ----QNN 780

Query: 781  DKYVRD-KVGQMGISLTNSSTAESMPRSLNVLPCETVEDPNLESNLQNGLLLELQDALAD 840
            +K  +D + G+MG+ L+NSSTAES  +SL+           L++     ++LEL++ L +
Sbjct: 781  EKGGKDSEAGEMGVFLSNSSTAESPQKSLD---DNVATGRGLDAKDSGDIILELRNELME 840

Query: 841  KTNLLNETETKLKDAMEEVASLKIELEASRKLLDESQMNCAHLENCLHEAREEAQTHLCA 900
            K+N L+E E+KL  AMEEV++L  ELE ++KLL+ESQMNCAHLENCLHEAREEAQTHLCA
Sbjct: 841  KSNKLSEMESKLNGAMEEVSNLSRELETNQKLLEESQMNCAHLENCLHEAREEAQTHLCA 900

Query: 901  ASRRASEYNALRASAVKMRGHVERLKTYVFAPSGVAAFAHSLRTLAQSLANSVSDNENDG 960
            A RRAS+Y ALRASAVKMRG  ER ++ V A SG+A FA SLRTLAQ+LANSV++NE+DG
Sbjct: 901  ADRRASQYTALRASAVKMRGLFERFRSSVCAGSGIADFADSLRTLAQALANSVNENEDDG 960

Query: 961  TNEFRQCIWAIAERVGILVKEREELLEKYPKLEAANEQLVKELEEKKEL----------- 1020
            T EFR+CI  +A++V  L K REELLEK   LEA +EQ  K+LEEKKEL           
Sbjct: 961  TTEFRKCIRVLADKVSFLSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLYTKHQLG 1020

Query: 1021 --ANKEKISFGRMKVHEIAAFVRNAAGHYEAINRNCANYYLSAESVALFADNLLTRPNHI 1080
              ANKEKISFGR++VHEIAAFV N AGHYEAINRNC NYYLS+ES ALF D+L +RP +I
Sbjct: 1021 KQANKEKISFGRLEVHEIAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPSRPTYI 1080

Query: 1081 VGQVVHIERQIVK--------PSPPSPRRDHGRVDQTDCVISDSGTDRLTLNSGLSLNPY 1140
            VGQ+VHIERQIVK         SP + +  H   DQ    ++ S     T ++  + NPY
Sbjct: 1081 VGQIVHIERQIVKLPSQLSASASPEAGKTHHLCSDQGSRTLASSSISTST-SATTTSNPY 1140

Query: 1141 SLPVGCEYFIVTVAMLPDTAIHSTAS 1143
             L  GCEYFIVT+AMLPDTAIH  AS
Sbjct: 1141 GLSSGCEYFIVTIAMLPDTAIHQQAS 1148

The following BLAST results are available for this feature:

BLAST of CmaCh12G008430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUG7	0.0e+00	60.21	Autophagy-related protein 11 OS=Arabidopsis thaliana OX=3702 GN=ATG11 PE=1 SV=1	[more]

BLAST of CmaCh12G008430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30790.1	0.0e+00	60.21	INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 290..310
None	No IPR available	COILS	Coil	Coil	coord: 979..1013
None	No IPR available	COILS	Coil	Coil	coord: 828..890
None	No IPR available	COILS	Coil	Coil	coord: 650..684
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..127
None	No IPR available	PANTHER	PTHR13222:SF2	BNAA01G06340D PROTEIN	coord: 9..1142
IPR019460	Autophagy-related protein 11, C-terminal	PFAM	PF10377	ATG11	coord: 984..1130 e-value: 1.8E-15 score: 57.1
IPR007240	Autophagy-related protein 17	PFAM	PF04108	APG17	coord: 144..314 e-value: 5.6E-7 score: 29.0
IPR040040	Autophagy-related protein 11	PANTHER	PTHR13222	RB1-INDUCIBLE COILED-COIL	coord: 9..1142
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 10..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008430.1	CmaCh12G008430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0000422	autophagy of mitochondrion
biological_process	GO:0006914	autophagy
cellular_component	GO:0005737	cytoplasm