CmaCh12G008390 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G008390
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionDUF4220 domain-containing protein
LocationCma_Chr12: 6212006 .. 6214015 (-)
RNA-Seq ExpressionCmaCh12G008390
SyntenyCmaCh12G008390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCTGAACTATTTGAAAAAATTATACCAAGAGATATCAGTTCCTTGTGGAGTTACTGGGGCATTGAGTTGCTAGTATTGGCAAACTTCATGTTCCAAATTATCTTAACTTTCAATGGATGTCGTCGAAGGCACACACCGGGATATAAGCTCAGCTTAACCGTTTGGTTTTCCTACTTATTGGCTGCTAAACTAGCAACGGTTGTTCTGGGCAAGCTAACAACAATCGAAATAGGCAAAGACCAACGCAACACGCACACCCAAATTCAGGCGTTGTTGGCACCATTGATGTTCATGCAAATAGGAAATCCAGATACGATCACAGCCTACTCAATCGAAGACAACCAGCTAGGAGTGAGGCAAATTTTCAGCTTGGTGATCCAAGTGAGTATAATGTTCTACATTCTTATAAGGTCATGGACAAATTCAAGAACATCGTTTCTTTACTTGCCAATGTCTTTAGCTGGGATAATCAAGTATGCAGAAACATCATGGGCTCTAAAATCAGCACTCAATGGAAACTTCGGCTTCACAATTGCCGATTTCTTCAAATATCACGAAGTAGCTCGTTTATTCGACAAACTGCCACAGGGAGAGAACGAACTCCCAGAGGCAAAATTGATCTTAAGAGCTTATTATAGATTTTGCTGCCTAAAACCACATCTAGAAAATTGGCTTTACTATCCTCCAACTGATTGCGAATACCAAAAACTCTACATCGACGACTGTGACTATGAAGACGTGTTCAGAATTACAGATTCTGAGCTGGGTTTCATGTACGATGCACTTTATACGAAAGCACCGGTCGTATATACTCGTAAGGGTTTAATTCTCCGTTGTATTAGCTTACTTAGCTTGATAGCCACACTAGTTGGGTTTTCAGTCTTGTTCAAGGATGCTTTTGTGTATAATATCAGTGTTGGATTTATCCATTTTGTGTTGATAGCATCTCTGATAATTGAGGTATATCAGATCTTGAGATTACCATACACAGATTGGGCTATAATCCAAATGATTAGGCACTATGAAACTTTTCCTTTTCTTATGGGTTTCTTGCAGTCTCTAGCCCCTCAATCAGCAACTTGGAGAAGATGGTCCAATACAATGGGACAGTTCAATCTTTTAGATTTCTGCTTGCAAACCAAGCACCGAAACTACAGCCGAATTAAAATTCTCCGATATTGGGGCATGGATATGAAACTCCGAAAGCAATTGAGTTTGGACCGAATCGACGTCGATCCGAAAGTGAAAGAGCTTGTGGTAGCAGAACTTAGAGAGATAGATAAGATCAAAGGACAAGAAGAGTTCGATCAAAGAGGCCAATGGACAATCGGAAGGTACCGAGAAAAACTCAAACTCAATGACGTGATCCAAGCACTCGAAACAACAGTAGCCAAGAGACCATTCGATAAGAGCATATTCATATGGCATATCACAACAAATATTTTCTATCACATACAGAGCTTTCATGATACTACTGACACTACTAAAATGGAAGCTATCATGAATATATCAGATTATATGATGTACCTTTTGGTGACGCGTTCGCACGTGCTATCGTCAACAACTGGAGATATCATATTTGACCATTCGTGTGTGAAGCTCGGGAGGTTAACGAGAACTGGACGTCTGAACAAAGAGGAAGCCTGCCAAGATCTGTTAGGTTTACAGAAAGAAGGTATCCTTCAAGTGAAGGAACCACATGCACCACCTGAATCAGAAGCAGAGAAAGTAGTTGTAGGGAATTGGAATCTGCTGAAGGATGTAAAAGAATTAGCAGATAGCTTATCAACAATGAGCAATGAAAACATATGGAAGGTAATAGGGAGTATGTGGGTTGAGATGTTGGGATATGCAGCAAGTCACTGTGAAATGGAATATCATTCAGAACATATCAGACATGGAGGTGAATTGATCACTCATGTTTGGCTTTTGGTAGCACATAATGTTACCAAATACAGTTCATATGAGTATCATTTCGGCAGTCAAGATGAAGAGACTCATTAA

mRNA sequence

ATGTTTTCTGAACTATTTGAAAAAATTATACCAAGAGATATCAGTTCCTTGTGGAGTTACTGGGGCATTGAGTTGCTAGTATTGGCAAACTTCATGTTCCAAATTATCTTAACTTTCAATGGATGTCGTCGAAGGCACACACCGGGATATAAGCTCAGCTTAACCGTTTGGTTTTCCTACTTATTGGCTGCTAAACTAGCAACGGTTGTTCTGGGCAAGCTAACAACAATCGAAATAGGCAAAGACCAACGCAACACGCACACCCAAATTCAGGCGTTGTTGGCACCATTGATGTTCATGCAAATAGGAAATCCAGATACGATCACAGCCTACTCAATCGAAGACAACCAGCTAGGAGTGAGGCAAATTTTCAGCTTGGTGATCCAAGTGAGTATAATGTTCTACATTCTTATAAGGTCATGGACAAATTCAAGAACATCGTTTCTTTACTTGCCAATGTCTTTAGCTGGGATAATCAAGTATGCAGAAACATCATGGGCTCTAAAATCAGCACTCAATGGAAACTTCGGCTTCACAATTGCCGATTTCTTCAAATATCACGAAGTAGCTCGTTTATTCGACAAACTGCCACAGGGAGAGAACGAACTCCCAGAGGCAAAATTGATCTTAAGAGCTTATTATAGATTTTGCTGCCTAAAACCACATCTAGAAAATTGGCTTTACTATCCTCCAACTGATTGCGAATACCAAAAACTCTACATCGACGACTGTGACTATGAAGACGTGTTCAGAATTACAGATTCTGAGCTGGGTTTCATGTACGATGCACTTTATACGAAAGCACCGGTCGTATATACTCGTAAGGGTTTAATTCTCCGTTGTATTAGCTTACTTAGCTTGATAGCCACACTAGTTGGGTTTTCAGTCTTGTTCAAGGATGCTTTTGTGTATAATATCAGTGTTGGATTTATCCATTTTGTGTTGATAGCATCTCTGATAATTGAGGTATATCAGATCTTGAGATTACCATACACAGATTGGGCTATAATCCAAATGATTAGGCACTATGAAACTTTTCCTTTTCTTATGGGTTTCTTGCAGTCTCTAGCCCCTCAATCAGCAACTTGGAGAAGATGGTCCAATACAATGGGACAGTTCAATCTTTTAGATTTCTGCTTGCAAACCAAGCACCGAAACTACAGCCGAATTAAAATTCTCCGATATTGGGGCATGGATATGAAACTCCGAAAGCAATTGAGTTTGGACCGAATCGACGTCGATCCGAAAGTGAAAGAGCTTGTGGTAGCAGAACTTAGAGAGATAGATAAGATCAAAGGACAAGAAGAGTTCGATCAAAGAGGCCAATGGACAATCGGAAGGTACCGAGAAAAACTCAAACTCAATGACGTGATCCAAGCACTCGAAACAACAGTAGCCAAGAGACCATTCGATAAGAGCATATTCATATGGCATATCACAACAAATATTTTCTATCACATACAGAGCTTTCATGATACTACTGACACTACTAAAATGGAAGCTATCATGAATATATCAGATTATATGATGTACCTTTTGGTGACGCGTTCGCACGTGCTATCGTCAACAACTGGAGATATCATATTTGACCATTCGTGTGTGAAGCTCGGGAGGTTAACGAGAACTGGACGTCTGAACAAAGAGGAAGCCTGCCAAGATCTGTTAGGTTTACAGAAAGAAGGTATCCTTCAAGTGAAGGAACCACATGCACCACCTGAATCAGAAGCAGAGAAAGTAGTTGTAGGGAATTGGAATCTGCTGAAGGATGTAAAAGAATTAGCAGATAGCTTATCAACAATGAGCAATGAAAACATATGGAAGGTAATAGGGAGTATGTGGGTTGAGATGTTGGGATATGCAGCAAGTCACTGTGAAATGGAATATCATTCAGAACATATCAGACATGGAGGTGAATTGATCACTCATGTTTGGCTTTTGGTAGCACATAATGTTACCAAATACAGTTCATATGAGTATCATTTCGGCAGTCAAGATGAAGAGACTCATTAA

Coding sequence (CDS)

ATGTTTTCTGAACTATTTGAAAAAATTATACCAAGAGATATCAGTTCCTTGTGGAGTTACTGGGGCATTGAGTTGCTAGTATTGGCAAACTTCATGTTCCAAATTATCTTAACTTTCAATGGATGTCGTCGAAGGCACACACCGGGATATAAGCTCAGCTTAACCGTTTGGTTTTCCTACTTATTGGCTGCTAAACTAGCAACGGTTGTTCTGGGCAAGCTAACAACAATCGAAATAGGCAAAGACCAACGCAACACGCACACCCAAATTCAGGCGTTGTTGGCACCATTGATGTTCATGCAAATAGGAAATCCAGATACGATCACAGCCTACTCAATCGAAGACAACCAGCTAGGAGTGAGGCAAATTTTCAGCTTGGTGATCCAAGTGAGTATAATGTTCTACATTCTTATAAGGTCATGGACAAATTCAAGAACATCGTTTCTTTACTTGCCAATGTCTTTAGCTGGGATAATCAAGTATGCAGAAACATCATGGGCTCTAAAATCAGCACTCAATGGAAACTTCGGCTTCACAATTGCCGATTTCTTCAAATATCACGAAGTAGCTCGTTTATTCGACAAACTGCCACAGGGAGAGAACGAACTCCCAGAGGCAAAATTGATCTTAAGAGCTTATTATAGATTTTGCTGCCTAAAACCACATCTAGAAAATTGGCTTTACTATCCTCCAACTGATTGCGAATACCAAAAACTCTACATCGACGACTGTGACTATGAAGACGTGTTCAGAATTACAGATTCTGAGCTGGGTTTCATGTACGATGCACTTTATACGAAAGCACCGGTCGTATATACTCGTAAGGGTTTAATTCTCCGTTGTATTAGCTTACTTAGCTTGATAGCCACACTAGTTGGGTTTTCAGTCTTGTTCAAGGATGCTTTTGTGTATAATATCAGTGTTGGATTTATCCATTTTGTGTTGATAGCATCTCTGATAATTGAGGTATATCAGATCTTGAGATTACCATACACAGATTGGGCTATAATCCAAATGATTAGGCACTATGAAACTTTTCCTTTTCTTATGGGTTTCTTGCAGTCTCTAGCCCCTCAATCAGCAACTTGGAGAAGATGGTCCAATACAATGGGACAGTTCAATCTTTTAGATTTCTGCTTGCAAACCAAGCACCGAAACTACAGCCGAATTAAAATTCTCCGATATTGGGGCATGGATATGAAACTCCGAAAGCAATTGAGTTTGGACCGAATCGACGTCGATCCGAAAGTGAAAGAGCTTGTGGTAGCAGAACTTAGAGAGATAGATAAGATCAAAGGACAAGAAGAGTTCGATCAAAGAGGCCAATGGACAATCGGAAGGTACCGAGAAAAACTCAAACTCAATGACGTGATCCAAGCACTCGAAACAACAGTAGCCAAGAGACCATTCGATAAGAGCATATTCATATGGCATATCACAACAAATATTTTCTATCACATACAGAGCTTTCATGATACTACTGACACTACTAAAATGGAAGCTATCATGAATATATCAGATTATATGATGTACCTTTTGGTGACGCGTTCGCACGTGCTATCGTCAACAACTGGAGATATCATATTTGACCATTCGTGTGTGAAGCTCGGGAGGTTAACGAGAACTGGACGTCTGAACAAAGAGGAAGCCTGCCAAGATCTGTTAGGTTTACAGAAAGAAGGTATCCTTCAAGTGAAGGAACCACATGCACCACCTGAATCAGAAGCAGAGAAAGTAGTTGTAGGGAATTGGAATCTGCTGAAGGATGTAAAAGAATTAGCAGATAGCTTATCAACAATGAGCAATGAAAACATATGGAAGGTAATAGGGAGTATGTGGGTTGAGATGTTGGGATATGCAGCAAGTCACTGTGAAATGGAATATCATTCAGAACATATCAGACATGGAGGTGAATTGATCACTCATGTTTGGCTTTTGGTAGCACATAATGTTACCAAATACAGTTCATATGAGTATCATTTCGGCAGTCAAGATGAAGAGACTCATTAA

Protein sequence

MFSELFEKIIPRDISSLWSYWGIELLVLANFMFQIILTFNGCRRRHTPGYKLSLTVWFSYLLAAKLATVVLGKLTTIEIGKDQRNTHTQIQALLAPLMFMQIGNPDTITAYSIEDNQLGVRQIFSLVIQVSIMFYILIRSWTNSRTSFLYLPMSLAGIIKYAETSWALKSALNGNFGFTIADFFKYHEVARLFDKLPQGENELPEAKLILRAYYRFCCLKPHLENWLYYPPTDCEYQKLYIDDCDYEDVFRITDSELGFMYDALYTKAPVVYTRKGLILRCISLLSLIATLVGFSVLFKDAFVYNISVGFIHFVLIASLIIEVYQILRLPYTDWAIIQMIRHYETFPFLMGFLQSLAPQSATWRRWSNTMGQFNLLDFCLQTKHRNYSRIKILRYWGMDMKLRKQLSLDRIDVDPKVKELVVAELREIDKIKGQEEFDQRGQWTIGRYREKLKLNDVIQALETTVAKRPFDKSIFIWHITTNIFYHIQSFHDTTDTTKMEAIMNISDYMMYLLVTRSHVLSSTTGDIIFDHSCVKLGRLTRTGRLNKEEACQDLLGLQKEGILQVKEPHAPPESEAEKVVVGNWNLLKDVKELADSLSTMSNENIWKVIGSMWVEMLGYAASHCEMEYHSEHIRHGGELITHVWLLVAHNVTKYSSYEYHFGSQDEETH
Homology
BLAST of CmaCh12G008390 vs. TAIR 10
Match: AT5G45540.1 (Protein of unknown function (DUF594) )

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-47
Identity = 198/799 (24.78%), Postives = 333/799 (41.68%), Query Frame = 0

Query: 9   IIPRDISSLWSYWGIELLVLANFMFQIILTFNGCRRRHTPGYKLSLTVWFSYLLAAKLAT 68
           +IP  +  LW  W I  +++ +   Q IL F    RR T      + +W +YLLA   A 
Sbjct: 4   MIPPHLRKLWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADWAAD 63

Query: 69  VVLGKLTTIEIGKDQRNTHTQIQALLA---PLMFMQIGNPDTITAYSIEDNQLGVRQIFS 128
             +G+++  +  + + N  ++ + LLA   P + + +G PDTITA ++EDN+L  R +FS
Sbjct: 64  YAVGQISDSQEEEAESNKPSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRHLFS 123

Query: 129 LVIQVSIMFYILIRSWTNSRTSFLYLPMSLAGIIKYAETSWALKSALNGNF--------- 188
           LV Q     Y+++ S  N R     L M + G+IKY E + AL SA    F         
Sbjct: 124 LVCQAVATVYVILLSIPN-RLLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSMLDDPD 183

Query: 189 -GFTIADFFKYHEVARLFD--------KLPQ----------GENELPEAKLILRAYYRFC 248
            G   A   + +E  +  +        K P+           +NEL   ++I  AY  F 
Sbjct: 184 PGANYAKLMEEYEARKKMNMPTDVIVVKDPEKGREGNTPVRPDNELTALQVIQYAYKYFN 243

Query: 249 CLKPHLENWLYYPPTDCEYQKLYIDDCDYEDVFRITDSELGFMYDALYTKAPVVYTRKGL 308
             K  + + L +   + +  + + D    E+  RI + ELG +YD L+TKA +++   G 
Sbjct: 244 IFKGLIVD-LIFTNQERDESRKFFDKLTAEEALRIIEVELGLIYDCLFTKAEILHNWTGA 303

Query: 309 ILRCISLLSLIATLVGFSVLFKDAFVYNISVGFIHFVLIASLIIEVYQILRLPYTDWAII 368
           + R I+L  L+A+L  F +  KD +     V   + +LI  + ++   +L    +DW I 
Sbjct: 304 VFRFIALGCLVASLCLFKMNKKDQY-DGFDVVLTYALLICGIALDSIALLMFCVSDWTIA 363

Query: 369 QMIRHYE-----------TFPFLMGFL-------------QSLAPQSATWRRWSNTMGQF 428
           ++ +  E              +++ F                +  ++  +RRWS  +  +
Sbjct: 364 RLRKLKEDLEEKDTLTDRVLNWILDFKTLRWKRSKCSQDGHQVLNRNFMFRRWSEYVHAY 423

Query: 429 NLLDFCL--QTKHRNYSRIKILRYWGMDMKLRKQLSLD---------------------- 488
           NL+ FCL  + K  +Y++ KI  ++   + +   LS+D                      
Sbjct: 424 NLIGFCLGIRPKRIHYTKGKIHSFFHQTVHI---LSIDTAIENATRGTRQFHNWIGRFLS 483

Query: 489 --------------------------------------------RIDVDPKVK----ELV 548
                                                       R  V  ++     E +
Sbjct: 484 NLSKRDNSVIRTGLRWFLFFPQLLGLLIYNFLDFFGIKDLVEEIRFTVSDRLTRELWEFI 543

Query: 549 VAELREIDKIKGQEE-----FDQRGQWTIGRYREKLKLNDVIQA-LETTVAKRPFDKSIF 608
             E+++  +    +E        RG WT+     K K +      L   V ++ +D+SI 
Sbjct: 544 FTEVQQKHRFAEDQESAKGISSARGNWTLLETSSKKKEDGTDHTKLLQYVTEKDYDQSIL 603

Query: 609 IWHITTNIFYHIQSFHDTTDTTKMEAIMN--------------ISDYMMYLLVTRSHVLS 650
           +WHI T + Y  Q   D   T K E   N              +SDYMMYLL+ +  ++S
Sbjct: 604 LWHIATELLY--QKPIDKKVTEKEEHSTNREKEEHSNREFSKILSDYMMYLLIVQPTLMS 663

BLAST of CmaCh12G008390 vs. TAIR 10
Match: AT5G45470.1 (Protein of unknown function (DUF594) )

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-38
Identity = 200/859 (23.28%), Postives = 326/859 (37.95%), Query Frame = 0

Query: 8   KIIPRDISSLWSYWGIELLVLANFMFQIILTFNGCRRRHTPGYKLSLTVWFSYLLA---A 67
           ++IP+ I  +W  W I   V+ +   Q IL      R+ TP   L + VW SYLLA   A
Sbjct: 3   EVIPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADWSA 62

Query: 68  KLATVVLGKLTTIEIGKDQRNTHTQIQALLAPLMFMQIGNPDTITAYSIEDNQLGVRQIF 127
             A  ++ K    ++  D      ++ AL AP + + +G PDTITA+++EDN L +R +F
Sbjct: 63  NFAVGLISKNQGKDLKPDDPPQDKKVMALWAPFLLLHLGGPDTITAFALEDNALWLRHVF 122

Query: 128 SLVIQVSIMFYILIRSWTNSRTSFLYLPMSLAGIIKYAETSWALKSALNGNFGFT----- 187
            LV Q     Y+++ S  NS    + L + ++G IKY E + AL SA    F  +     
Sbjct: 123 GLVFQAIAGVYVVVMSLPNSLWVVIVL-VFVSGTIKYLERTTALYSASLDKFRDSMIQAP 182

Query: 188 --------IADFFKYHEVARLFDKL-----PQGEN-----------------ELPEAKLI 247
                   + + +K  + ARL  K+     P  EN                 +L + +++
Sbjct: 183 DPGPNYAKLMEEYKAKKEARLPTKIVLIDEPDKENRPKKLEHPALASKKRKKDLTDLEIV 242

Query: 248 LRAYYRFCCLKPHLENWLYYPPTDCEYQKLYIDDCDYEDVFRITDSELGFMYDALYTKAP 307
             AY  F   K  + N ++      E  +++ +  D E+  RI + ELGF+YDAL+TK  
Sbjct: 243 QYAYKFFNTFKGLVVNLIFSFRERDESLEIFENLNDPEEALRIIEIELGFLYDALFTKIA 302

Query: 308 VVYTRKGLILRCISLLSLIATLVGF-SVLFKDAFVYNISVGFIHFVLIASLIIEVYQILR 367
           +++T  G + R  +  +L+A  + F     K    +   V   + +    L+++   IL 
Sbjct: 303 ILHTGIGTVSRVFASGTLVAAFIIFHKKPNKGTDFHGADVVVTYTLFAVGLVLDFISILL 362

Query: 368 LPYTDWAIIQMIRHYETFPFLMGFLQSLAPQSATW------------------------- 427
             ++DW        Y +       LQS   +   W                         
Sbjct: 363 FLFSDWTCAA----YSSLKDDPDELQSWQERCFNWLLKFRKLRWTPQECHKTGMHKCTKE 422

Query: 428 ----------------------------------------------------RRWSNTMG 487
                                                               RRWS ++ 
Sbjct: 423 GLKPCIMKGADKKEGGNKNEGGNKKEGDDKKEAADKCSLVDKHDVLTTRFFLRRWSGSIN 482

Query: 488 QFNLLDFCLQT----------KHRNYS-----------RIKILRYWGMDMKL-------- 547
            FN + +  +             R YS              I + +G  +KL        
Sbjct: 483 VFNFIAYATKADVERIHDARGSFRRYSWKIITFPFKKLNFVIKKIFGSIVKLINEVHRRI 542

Query: 548 --------RKQL------------------------------------SLDRIDV----- 607
                   RK L                                    +LD +       
Sbjct: 543 SHEVNALSRKHLWARRFLYPIYFEFISRIPHFIKSVWDILSEFFDISDTLDMVHKTLFVH 602

Query: 608 -DPKVKEL---VVAELREIDKIKGQEEFDQ-----RGQWTIGRYREKLKLNDVIQALETT 650
            +P  +EL   +  EL+   K     E  +     RG+WT+   RE L ++   + L   
Sbjct: 603 GEPMTRELWKFIFEELKNKSKYGDSPENAKRISLARGEWTL---RENLPVDAEREKLVRY 662

BLAST of CmaCh12G008390 vs. TAIR 10
Match: AT5G45530.1 (Protein of unknown function (DUF594) )

HSP 1 Score: 158.3 bits (399), Expect = 2.1e-38
Identity = 186/794 (23.43%), Postives = 323/794 (40.68%), Query Frame = 0

Query: 8   KIIPRDISSLWSYWGIELLVLANFMFQIILTFNGCRRRHTPGYKLSLTVWFSYLLAAKLA 67
           ++IP  I  +   W I  LV+ + +FQ  L F    R+ T    L+  +W +YLLA   A
Sbjct: 2   QVIPPAIKKILDKWNIRGLVIMSLLFQTSLIFLAPMRKRTSKKLLAAVLWTAYLLADWTA 61

Query: 68  TVVLGKLT-----TIEIGKDQRNTHTQIQALLAPLMFMQIGNPDTITAYSIEDNQLGVRQ 127
              + ++T       E G   +N   ++ AL AP + + +G PDTITA ++EDN L  R 
Sbjct: 62  NYAVSQITKNQGKETEPGDPPKN--KKLLALWAPFLLLHLGGPDTITALALEDNALWQRH 121

Query: 128 IFSLVIQVSIMFYILIRSWTNSRTSFLYLPMSL---AGIIKYAETSWALKSALNGNFGFT 187
           +F LV Q     Y +++S  N     L+ P++L    G IKY E + AL SA    F   
Sbjct: 122 LFGLVSQALAGVYAVVQSLEN----VLWPPITLLFITGTIKYVERTRALYSASLDKFKDR 181

Query: 188 I-------ADFFKYHE--VARLFDKLP-------------------QGENELPEAKLILR 247
           +       +++ K  E   +R    LP                   + + +L + +++  
Sbjct: 182 MLQRADAGSNYAKLMEEFASRKMSNLPTEIFLTDEPDKHERPPTLVKPDRDLTDLEIVQY 241

Query: 248 AYYRFCCLKPHLENWLYYPPTDCEYQKLYIDDCDYEDVFRITDSELGFMYDALYTKAPVV 307
            +  F   K  + + L +   + +  + +  +    +  RI ++ELGF+Y+++YTK  ++
Sbjct: 242 GFKFFNTFKGLVVD-LIFSFRERDESRDFFKELKPGEALRIIETELGFLYESMYTKTAIL 301

Query: 308 YTRKGLILRCISLLSLIATLVGFSVL-FKDAFVYNISVGFIHFVLIASLIIEVYQILRLP 367
           +T  G + R IS  SL+++   F     K    +   V   + + I  + +++  ++   
Sbjct: 302 HTGIGTLFRLISFGSLLSSFFVFHRRPLKSEDFHGADVVITYVLFIVGIALDLASMVIFL 361

Query: 368 YTDWAIIQMIRHYETFP---------FLMGFLQSLAPQ-----------------SATWR 427
            +DW    ++R+ +  P             FL+   P+                     R
Sbjct: 362 LSDWT-FAVLRNLKDDPEEKSTSIDSLFNWFLEFRKPRWKKHTCNGNQTHEVLSTGFFTR 421

Query: 428 RWSNTMGQFNLLDFCLQTK------HRNYS----------------RIKILRYW--GMDM 487
           RWS T+  FN + FCL+ K       RN +                RI+++  W   ++ 
Sbjct: 422 RWSGTIYGFNFIGFCLKAKVSRIHQKRNCNLLVWDYVVSLFDLVIRRIQMMIGWIKNVNR 481

Query: 488 KLRKQLS----------------------------------LDR-------------IDV 547
            +R  L                                   +DR             I  
Sbjct: 482 SIRSVLRQWSKKNPMIRCTVYPLYLVFFAGIPEVFRVLWKYIDRIFSVTSYLDGIRFISR 541

Query: 548 DPKVK---ELVVAELREIDKIKGQEEFDQRGQWTIGRYREKLKLNDVIQALETTVAKRPF 607
           +P  K   E +  E+++        E  ++  W  G +  +      +  L   + K  +
Sbjct: 542 EPLTKNQWEFIFNEVKDKSGFAETPEVAKKVSWARGEWALRDSKLMEVDTLMRYIEKVDY 601

Query: 608 DKSIFIWHITTNIFYHIQSFHDTTDTTKMEAIMN-----------ISDYMMYLLVTRSHV 650
           D+S+ +WHI T + +  +      +  KME +             ISDYMMYLL+ R  +
Sbjct: 602 DQSLLLWHIATELCFQKE------EGGKMEKLSREGYDDREFSKIISDYMMYLLIMRPKL 661

BLAST of CmaCh12G008390 vs. TAIR 10
Match: AT5G45480.1 (Protein of unknown function (DUF594) )

HSP 1 Score: 131.7 bits (330), Expect = 2.2e-30
Identity = 182/861 (21.14%), Postives = 315/861 (36.59%), Query Frame = 0

Query: 10  IPRDISSLWSYWGIELLVLANFMFQIILTFNGCRRRHTPGYKLSLTVWFSYLLAAKLATV 69
           IP+ I  +W  W I   ++ +   Q  L F   +R+ +    L   +W +YLLA   A  
Sbjct: 5   IPKPIKDIWDEWSIRSTLIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADWSANF 64

Query: 70  VLGKLTTIEIGKD----QRNTHTQIQALLAPLMFMQIGNPDTITAYSIEDNQLGVRQIFS 129
             G+++  + G D    +     ++ A   P + + +G PDTITA ++EDN+L +R +  
Sbjct: 65  AAGQISDSQ-GDDPEPGEPKKSAELFAFWVPFLLLHLGGPDTITALALEDNELWLRHLLG 124

Query: 130 LVIQVSIMFYILIRSWTNSRTSFLYLPMSL---AGIIKYAETSWALKSALNGNFGFTI-- 189
           L  Q     Y+L++S  N+    L+ P+ L    G+IKY E + AL  A    F  ++  
Sbjct: 125 LFFQSVATVYVLLQSLPNA----LWKPILLVFATGVIKYVERTLALYLASLDKFKDSMIQ 184

Query: 190 -----ADFFKYHE--VARLFDKLPQ-----GENE--------------LPEAKLILRAYY 249
                 ++ K  E   A+   K+P      GE E                   ++  AY 
Sbjct: 185 RPDPGPNYAKLMEEYAAKKDMKMPTQIIKVGEPEKDPRDDAPVKPPDGFTPLNILQYAYK 244

Query: 250 RFCCLKPHLENWLYYPPTDCEYQKLYIDDCDYEDVFRITDSELGFMYDALYTKAPVVYTR 309
            F   K  + + ++      E  K + D    E+  RI + EL F+Y ALYTKA +++  
Sbjct: 245 YFNIFKGLVVDLIFTFQQRAE-SKRFFDSLKAEEALRILEVELNFIYAALYTKAEILHNW 304

Query: 310 KGLILRCISLLSLIATLVGFSVLFKDAFVYNISVGFIHFVLIASLIIEVYQILRLPYTDW 369
            G + R I+L  L A L  F    K  +     VG  + +L+  + ++   ++    +DW
Sbjct: 305 IGFLFRFIALGCLAAALRIFQYKSKKDY-SGFDVGLTYALLLGGIALDCIALIMFCASDW 364

Query: 370 AIIQM--------------------------------IRHYE-----------------T 429
             +++                                +  Y+                  
Sbjct: 365 TFVRLRKMKDEVDDPPTWSDNILNWILENILGVRKLKVEEYDECYKNTQSHEVPNTSTKK 424

Query: 430 FPFLMGFL---------------------------QSLAPQSA-------------TWRR 489
            PFL   L                           Q +  +SA              +RR
Sbjct: 425 TPFLKRILNRILRVRELKTEKSHEVLDKSTSKIPGQEVPDKSAKTIPCHKVLDTSFMYRR 484

Query: 490 WSNTMGQFNLLDFCLQTKHRNYSRIKILRYWGMDMKLR------------------KQLS 549
           WS  +   NL+++CL  K +     K   +   D  +                    +++
Sbjct: 485 WSEYVHAHNLIEYCLGLKPKRIHHTKGFIHIAFDKVINILYIGPAFTKLGSVIESCFRVT 544

Query: 550 LDRID-----VDPKVKEL--------------------------------------VVAE 609
             RI      +D KV  L                                      + A+
Sbjct: 545 KQRIHQTFKWIDGKVSRLCKKYPKLNEEYIRFSFFCIFYIPSLPGRWIKSFMEFFGIRAQ 604

Query: 610 LREI-----------------DKIKGQEEF-----------DQRGQWTIGRYREKLKLND 650
           L E+                  ++K +  F             RG WT+   +   +   
Sbjct: 605 LDEVIYTSSDRLTLDMWEHIFGEVKAKSRFADDSESAMRVSSARGDWTLRDIQGDPETEK 664

BLAST of CmaCh12G008390 vs. TAIR 10
Match: AT5G45460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 8.5e-27
Identity = 99/365 (27.12%), Postives = 167/365 (45.75%), Query Frame = 0

Query: 9   IIPRDISSLWSYWGIELLVLANFMFQIILTFNGCRRRHTPGYKLSLTVWFSYLLA---AK 68
           +IP+ I   W  W I   +  +   Q  L      R+ TP   L + +W SYLLA   A 
Sbjct: 4   VIPKHIKDAWDRWNIRGTIFLSLTLQAFLICFSPLRKRTPRRHLIIVIWSSYLLADWSAN 63

Query: 69  LATVVLGKLTTIEIGKDQRNTHTQIQALLAPLMFMQIGNPDTITAYSIEDNQLGVRQIFS 128
            A  ++ K    ++  D      ++ AL AP + + +G PDTITA+++EDN L +R +F 
Sbjct: 64  FAVGLISKNQGKDLKPDDPPQDKKLMALWAPFLLLHLGGPDTITAFALEDNALWLRNVFG 123

Query: 129 LVIQVSIMFYILIRSWTNSRTSFLYLPMSLAGIIKYAETSWALKSALNGNFGFT------ 188
           LV Q     Y++++S  NS    + L + ++G IKY E + AL SA    F  +      
Sbjct: 124 LVFQAIAGVYVVLQSLPNSLWVTILL-VFISGTIKYLERTTALYSASLDKFRDSMIQGPD 183

Query: 189 -------IADFFKYHEVARLFDKL-----PQGEN-----------------ELPEAKLIL 248
                  + + +K  + A+L  K+     P  E+                 EL   ++  
Sbjct: 184 PGPNYAKLMEEYKAKKEAKLPTKIILIDEPDKEHRPKKLEHPSLASETKRKELTHLEIAQ 243

Query: 249 RAYYRFCCLKPHLENWLYYPPTDCEYQKLYIDDCDYEDVFRITDSELGFMYDALYTKAPV 308
            AY  F   K  + N ++      +  +++ +  D E+  RI + ELGF+YDAL+TK  V
Sbjct: 244 YAYKFFNTFKGLVVNLIFSFRERDQSIEIFQNLEDPEEALRIIEIELGFLYDALFTKNAV 303

Query: 309 VYTRKGLILRCISLLSLIATLVGF-SVLFKDAFVYNISVGFIHFVLIASLIIEVYQILRL 335
           ++T  G + R ++  SL+A  + F  +  K    +   V   + +    L+++   IL  
Sbjct: 304 LHTVLGTVSRVVASGSLVAAFIIFHKISNKGRDFHGADVVITYILFAVGLVLDFISILLF 363

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT5G45540.11.5e-4724.78Protein of unknown function (DUF594) [more]
AT5G45470.11.3e-3823.28Protein of unknown function (DUF594) [more]
AT5G45530.12.1e-3823.43Protein of unknown function (DUF594) [more]
AT5G45480.12.2e-3021.14Protein of unknown function (DUF594) [more]
AT5G45460.18.5e-2727.12unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025315Domain of unknown function DUF4220PFAMPF13968DUF4220coord: 57..377
e-value: 5.4E-51
score: 174.0
IPR007658Protein of unknown function DUF594PFAMPF04578DUF594coord: 601..649
e-value: 1.3E-18
score: 66.4
NoneNo IPR availablePANTHERPTHR31325:SF221DUF594 FAMILY PROTEINcoord: 36..642
NoneNo IPR availablePANTHERPTHR31325OS01G0798800 PROTEIN-RELATEDcoord: 36..642

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G008390.1CmaCh12G008390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane