CmaCh12G007810 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G007810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
LocationCma_Chr12: 5223433 .. 5239592 (-)
RNA-Seq ExpressionCmaCh12G007810
SyntenyCmaCh12G007810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCAATAAATCCCCTACATTCGTCTTGGCCCAGATTTAAAACTCTCCTCAACGGTTTGTGTAGCCAAATCCTATATTTGAGTTTATTCAGTGAGATCTGGTGACTTTGTATACCATTCCGTTGTAAATCAATGATCTTATCATAGTTATGGTCTTGAAATTATATAATAATGGAAACAGAAACCCTAGTTGCCAGCTCTATATCTGGTTTACTTGTCAGTTTGACTGGGTATGCCTTATATACTCCTATACTACTTTTGGGCAACCCTCTCAACAACTAAGAGATCCATTTGAGGACAACTAAGAGATCCATTCGAGGAACACGAGGACTAGTTGAAGTACTGAGAAAGAATTTAGCCTTTGTTTAGTTAGAACTTTAGGCGGTTTGCGAAAAAAGAGAGCGAAACAAATTTTTCCTAGAGTCGAGACTAAAAGGAATGTATAAACTGTTAGATAAAACCTGAGTTTTTATAGCTTTTCCTTATTCACACGATTTCAGAAAATCTCCGTTTGACCATTTGACAAATCACGTCGAATGGATCATGATATGAAACAAGGAACATGAATCATACAATATGCTTCAATGAAGATGTGAAGAAAATATTGTTGAAATAATCAAAAGATATTTCAATTCATGCCACATTGAAGAAGAATGAAGTTTCATGTGATAAATTTGGGGTGGATTACAATTTAGAGCTATTGTATTTCATTAATGTATTTAAGAGTTTTTATTTATTTTGGGTTACAATTACATAATGGTTAATTATGGTCATTAAGTATGAATGTAACAACTCTTGGAATGCCTTTAGTAGTTTCATTTTGAAGCTATATAAAGCCATGTATATTGTATTTGTAAGCAGACTTGGAAAATATATAGTAAAAGAAGCATTTGTGTTTTCTTTAGCCAATGACTAAGTTTATTTGCAATTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAGTGTTTGAGATATTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGAGTGTCATTCAAGCTAGACATGATCGATCTTACTTGTGGAGTGATTCGAATTTTAAACAATGTTCTTGCCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTAGTGGTTCCTTATCTTATCAGATCACCAAAATTTTAGACGGAAATTTTGTAGGGAGTGGCACAGATTTAGTTGACCACTCTCCAGCCATATTTAGAATAATTTATATTTTAAATAGGAAATTTGTTCAGAATAAACAACAACCTGATTTTGAACGCAGTCAGAATTCAGTTATCCTCTCTCTCCAAGATCGGTGTATATCATTGCAGAAGAGCCAACCTATCAACAAACAAGTTGAATAACTCATCAAGTGGTCATCATTCACAGGTCTCAGGTTTGAGTAGAAGAAAATGCAAAGTGTAAAAACACACACATCGTGGGGCCCATCTTCGGCAGGCTCACTCACTCCTCCACACCGACGTTGTGATGACTATGTTTTTTTTTTTGGGAATTGGTTGGAATGTGTTCTTATCTATTAATAGGTTTTTGGTTCACTCGACCTACTGCGGCAAATGCTTGTCAAAAGGCATTTGTAACTAATCGCGTGGGGGATTTTGGTTTATTATTAGGGATTTTAGGTCTTTATTGGACAAGAGGGAGTTTTGAATTTCAGGATTTATTTAAAATATTCAATAACTTGATTTATAATAATGAGGTTAATTTATTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCAGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGTCCTACCCCGATTTCGGCTCTTATACATGCTGCTACGATGGTAGTAGCGAGAATTTTTCTTATCGCTCGGTTTCTTCCTCCTCCACGCCGTCGCCGTGTGCCGACATCTCCATCACCGCCACGAAGAGGCCGACGCCGTGATGACGGGCGTCAAGTTATCGTTGAGCGAGTGATCAGGGAGACAACGACTGCAGTCGTTCAGTATCCTATATTGATAAAGTCCAACTATAACGAGTGGACCTTGTTGATGCGCGTCAACCTACAGGCATTGGCCTGGGAGGGAATCAAATCCCGTCGAGTCTGTACAGCGAGTGCGAGAATCCAACATCGAGCAGCTACGGAAGGAGCTCTCAGAGATCCACTTTAAGGATGGCGAATCCATCGATAATTTTTCAATGCGGATCACGGGGCTTGCCAATAGCATCACCACACTCGGTGGCAGCATCGGCGAGACAGAAATCGTGAAGAAGAAGCTGCAGGTCGTCCCTGATCACCTCGAGCAAGTTGCAATTTCAATCGAGACATTGCTTGACGTGAACGACCTAACGGTGGAAGAGGTGACCGAAAGACTGCGTAACGTCGAGCAGCGGAAGAAAAATACCATTTCAGCTGTCGACAAGGAGGGTCGTCTACTTCTCACTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGACAACACCGGCGAGAGCAATGGGTCCTCCTCCAGCCGCAAAGACGGAAAGAAGCCATGGATCTCCCACGGGCGCATGCGCGGGAAAGATGAGAATCAAAAGAAGGAGTCGACCAATGGCAGGCCGATCTGCTCGAACTGTGGGAAGAGAGGACACCTAAGCAGGAATTGCTAGAGAAAGCTTAGGAACAAGGAAAAGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGACGAGACAACTCTCTTCATGGTAACTGCATGTGTCCCCATGGTCGATTCCAAATCCACGGAGATGGAGGTAATCGACGACGATGTTGAACTCGAGAAAGAGCTCCAGCTGGGCGTAGCAAAGGTGGCACCAGCTAGGGAGCCAATTCAACTGGAGGAGGAGCGAGTGTTCGCTTAGATCAGCCAGCGGGACGAGCAACACAAGGACCGGGCGATGGATCCTAGACACAGGGGCAACAAACCATATGACCGGGGCTAGATCTGCGTTCTCCGAGCTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACAGCTCCGTCGTCGAGATCGAAGGACGCGACACCATCCTGTTCGCCAGCAAGGGAGGCGAGCATCGCAAGCTGACCGACGTCTATTTCATCCCGAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAACTCGATGAGACAGGCTGCTTCATCTCCATAGAGCACGGACTACTCAAAATTTGCGATAATCAACGACGGCTACTCACGCAGGCAAGGCGCACGACAAACCGTCTTTACATCCTGGACTTAGAGATAGAGCAACCTGTCAGTCTCTCGGCCAAGACTGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGGCATTTAAACTTTCCTGCTCTAGAAAAACTACAGAAGGAGGAGTTGGTACATGGTTTGCCAGCAATCAAAGGCGTGAACAAGCTGTGCGGTGGGTGTCTCATCGGCAAACAGAGGCGCACACCCTTTTCGTCTCGAACATCCTATCAAGCCGATGAGCCGTTGGAGCTTGTACACGGCGATATCTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACCCTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGTGCATTAAAGCGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCTAGTGCTGCGCACAGACCGAGGCGGAGAATTCACCTCGACAAGTTTCGGTAAGTACTGTGACGAAATCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTGGAGCGCCAGAATCAGACCATCGTCGGGACAGCAAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACGGCCGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTTGACGGGAAGACACCATATGAGGCCTGAAACAACAAAAAACCAGCGGTACATCATTTTCGCGTGTTCGGCTGCGTCACATACATGAAGGTAACACGTGCCCACCTCGCCAAGCTCGATCCTTGGGGGCTGAAGGTCGTCTTCATCGGCTATGAACCCGGGAGTAAGGCGTACAGACTATATGATCCTGTAGGGGGTCGAGCTCATGTATCTCGCGACGTCGTCTTCGACGAAAGCACCTTCTGACAGTGGAATGACGTGATCGAGGCAGACCATAATCCAAATCAATTTACGGTGAAGTACCTCGTCACCGAGCCAGAAGAAGGAGGAGCCCAGCATCAGCAGCCGTCACCGCCGCCAGCAGGTGCAACCCCTGAACCAGTGGAATTCGCAACACCACGAACTGCGGATTCGACGCTGGATGCCGATCACAATACTGATCTGGAGGCCAGGTACCGGAGGATGGACGACCTAGTAGGAGGAGGTGAACCACCTGGACTGGCAGTGCGCGAGCTCGAAGAAGTGGCCGAACTACATGCCATCAGTGCAGATGAACCGAACACTTTCGTCGAAGCAGAAAAGAACCCGTGCTGGCTGAAGGCAATGCAGGAGGAGATGACATCCATCACTGAAAACCAGACGTGGAGTCTGAAGGATATGCCACCGGGACACCAAGCCATAGGGCTCAAATGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACATGGCCCGTCTGGTGGCGAAGGGCTACGTCCAGAAGCAAGGAGTGGACTTCGAAGAGGTATTTGCGCCAGTGGCAAGGTTAGAATCCGTTCGTTTCTTGCTGGCAATTGCAGCACATTACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGCTGAAGGAGACTGTTTATGTCCGACAACCATCTGGCTTCCTGGACAACAACAACCCCAATAAAGTATTGTGCCTGCACAAGGCACTCTACGGGCTTCGACAAGCTCCACGAGCCTGGAACGCGAAGCTCGACAGTACCTTACTGTCACTGAAATTCAAACGTTGCGCCTCTAAGCATGACATGTACACGCACGGCCATGACAAGAAGCGACTAATCGTGGGAGTGTACGTCGATGACCTCATAATCACTGGAGGTGACATGGAAGTCTTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGGCGTGCTCAGCTACTATCTCGGCATCGAAGTGCAACAGAATTCTACCGGCATCTCCATCTGCCAAAGTGCATACGCAAAGAAGCTGCTGGACACAATTGGACTTGTGGACAGTAATCCTACAAGGACGCCAATGGAGGCCCGACTCCAACTAAGGAAGGCCGGCACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCTGATCTTGCTTATTCTGTTGGATATGTGAGCCGGTTTATGGAAGCACCTAGGGAGGAACATCTAGTGGCTGTCAAGCGCATCCTGCTCTATGTAGACGGAACCAGAGGCTGGGGTGTAAGATACTGCGCAGGGAGCGGAAAGGAGAAACTCAAGCTAGTCGGCTACAGTGATAGTGACATGGCCGGTGACGTTGATGATCATAAGAGCACTAGCGGAATGATCTACTTTCTCTCAGGCGGCGCAATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGTTTTGTCTTCCTGCGAAGCAGAATACATCACCGCTTCGATGACAGCAACACAAGGGATCTGGCTTGCGCGACTAATGGAAGAACTCATCGGGAGAGAAAGTGATCCACCAATGCTATACGTAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCATGAACGAAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGATGGCTCATCAAAATTGATTACATCCGAACAGAGGAACAACTTGGAGACATCTTCACCAAGTCCCTGGCGCGGGTGAAATTTGAAGAACTACGCTCAAAGATCGGAGTTCAAATAGTAAGGTAGATATACTACAGGTTTTAGGAGGAGATTGTTAGATAAAACCTGAGTTTTTATAGCTTTTCCTTATTCACACGATTTTAGAAAATCTCCGTTTGACCATTTGACAAATCACGTCGAATGGATCACCAAAATTTAGAAAGAAATTTTGAAGGGAGGCACAGATTTAGTTGACTACTCTCCAGCCATATTTAGAATAATTTATATTTTAAATAGGAGATTTGTTCAGAATAAACAACAACCTGATTTTGAACGCAGTCAGAATTCAGTTATCCTCTCTCTCCTTTTTTAAGCATTTTTCTTCCAACCAATTTCCTCTCACCGAACAATACAACATAAACCAATGCTTCCTTCCATAGATTTGATTTCGGTTTACAATTATAGCTTCCATACCCGTTTAGTTGGGATCTTTTTCAGGAAAAGACAAAGATAAGAGTCAAAGAAATGAAAAGTCAGCATCGATGTCAAATCAAAAAATCAAGGAAAAAAGAAACAGAGAAATCTTGTATCAGTTTAAACTGATATGAACCAAGAGACATCCATTATACAATATACTTCAATGAAGATGTGAAGAAAATATTGTTGAAATTATCTAAAGATATTTCAATTCATGCCACATTGAAGAATAATGAAGTTTCATGTAATAAATTTTGGGTGGATTACAATCGAGAGTAATTTAGAGTTATTGTATTTCATTAATGTATTTTAAGACTTTTTATTTACTTTAGATTACAATTAGGTTAATTATGGTCATTAAGTATGAATGTTACAACTCTTGGAATGCCTTTAATAATTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAAGTAGACTTGGAAAAAATATGTAAAAGAAGCCTTTGTGCTCTTCTTTAGCCAATGACTAAGTCCCTTTGCAATTCTATGTAGTTTAGGTTGCATGTAAAATCATTCAAGCTTGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTGTCTTGAGATAGTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGAGTGATTCAAATCTCAAACAATGTTCTTGTCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTAGTGATTCCTTATCTTATCATAGACTCTTTTTGTAATGGGATCTCCAAGTTTTTGGAATGCCACAAATTCCACTTGAGCGTCCAAATCGAGGTCAATCCCAACAAAGACATCTCTGAACAAGGTTCTAGCATCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGAAAACGAAGCATACCCAAAAGGAAACCAACCCCTTCCCTTGGACTGCTATGAAAGAAAAAACCCCATCGGATTTCAAAGTAGCACGATCTAATTCTAAAATTGCACCTAATTGAGCACGTATAGCATATTTTTTCACAGTAGCAGGATCACTATAACTGACTCCATTGAGTTCACCACCATAGAACTCAATAGTTACACCGACCTGTTCAACACTATACTTTGATTCTGTTCTTAGAAAAGGAAGATCGCCTCTAACAATTCCGTCGTCGTCTACCAAAACAACCGGAAATGTTTCAAAAAAGGTCGGCATACGGTTTGCGCCCTTCTTTCATTATCTCTAAAAACAGGGTGTCTTAACCACCCAACAGCTATTCCATCCCCGTTGTCCATGGAACCCACTCTAAATAATCTACCTTTTGCGGGATTATTCCCGATGTAATCATAAAAAGCTAATTTTGAAGTAATTTGAGACCAAGCTTCTGATAAACTTTGATTTTCGGCTAGCCCGGCACTAACCCTTCGATATGTTCTTGTCTTGAGATATTTGATCAATAAGGTAATTCGAATCTTACTCTCCTTGTAGTGATTTCCACATATCACCGTTTCTCCAATCGTTGCCGCCCTTAGAGAATGAAGTAAAAAGGTTGAAAATTCAATTCGAGCCGACGCATAAACTCATCGTGCAAGACCAATCACAATCAGTTTCTGCACATTCAAGGAGTATTTCATAGAAGACCATGAAGAGAATTAAGCCGAAGAACGTGCCCAATTAAAGAAAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAAGTAGACTTGGAAAAAATATGTAAAAGAAGCCTTTGTGCTCTTCTTTAGCCAATGACTAAGTCCCTTTGCAATTCTATGTAGTTTAGGTTGCATGTAAAATCATTCAAGCTTGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTGTCTTGAGATAGTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGAGTGATTCAAATCTCAAACAATGTTCTTGTCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTAGTGATTCCTTATCTTATCATAGACTCTTTTTGTAATGGGATCTCCAAGTTTTTGGAATGCCACAAATTCCACTTGAGCGTCCAAATCGAGGTCAATCCCAACAAAGACATCTCTGAACAAGGTTCTAGCATCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGAAAACGAAGCATACCCAAAAGGAAACCAACCCCTTCCCTTGGACTGCTATGAAAGAAAAAACCCCATCGGATTTCAAAGTAGCACGATCTAATTCTAAAATTGCACCTAATTGAGCACGTATAGCATATTTTTTCACAGTAGCAGGATCACTATAACTGACTCCATTGAGTTCACCACCATAGAACTCAATAGTTACACCGACCTGTTCAACACTATACTTTGA

mRNA sequence

ATGGTTTCAATAAATCCCCTACATTCGTCTTGGCCCAGATTTAAAACTCTCCTCAACGGTCTTTATTGGACAAGAGGGAGTTTTGAATTTCAGGATTTATTTAAAATATTCAATAACTTGATTTATAATAATGAGGTTAATTTATTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCAGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGAAGATCGCCTCTAACAATTCCGTCGTCGTCTACCAAAACAACCGGAAATGTTTCAAAAAAGGTCGGCATACGGATCACTATAACTGACTCCATTGAGTTCACCACCATAGAACTCAATAGTTACACCGACCTGTTCAACACTATACTTTGA

Coding sequence (CDS)

ATGGTTTCAATAAATCCCCTACATTCGTCTTGGCCCAGATTTAAAACTCTCCTCAACGGTCTTTATTGGACAAGAGGGAGTTTTGAATTTCAGGATTTATTTAAAATATTCAATAACTTGATTTATAATAATGAGGTTAATTTATTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCAGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGAAGATCGCCTCTAACAATTCCGTCGTCGTCTACCAAAACAACCGGAAATGTTTCAAAAAAGGTCGGCATACGGATCACTATAACTGACTCCATTGAGTTCACCACCATAGAACTCAATAGTTACACCGACCTGTTCAACACTATACTTTGA

Protein sequence

MVSINPLHSSWPRFKTLLNGLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGRSPLTIPSSSTKTTGNVSKKVGIRITITDSIEFTTIELNSYTDLFNTIL
Homology
[Close]
BLAST of CmaCh12G007810 vs. ExPASy Swiss-Prot
Match: B1NWJ6 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Manihot esculenta OX=3983 GN=ndhF PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 20  GLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 79
           GLYW  GSFEF+DLFKIFNNLIYNN+VN LFVTLCAVLLF+GA+AKSAQFPLHVWLPDAM
Sbjct: 195 GLYWITGSFEFRDLFKIFNNLIYNNQVNFLFVTLCAVLLFSGAIAKSAQFPLHVWLPDAM 254

Query: 80  EGRSPLT 87
           EG +P++
Sbjct: 255 EGPTPIS 261

[Close]
BLAST of CmaCh12G007810 vs. ExPASy Swiss-Prot
Match: Q2VED3 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum tuberosum OX=4113 GN=ndhF PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.7e-27
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 20  GLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 79
           G YW  GSFEF+DLF+IFNNLIYNNEVN LFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM
Sbjct: 195 GFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 254

Query: 80  EGRSPLT 87
           EG +P++
Sbjct: 255 EGPTPIS 261

[Close]
BLAST of CmaCh12G007810 vs. ExPASy Swiss-Prot
Match: Q68RV9 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Panax ginseng OX=4054 GN=ndhF PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.1e-27
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 20  GLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 79
           G YW  GSFEF+DLFKIF+NLIYNNEVN LFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM
Sbjct: 195 GFYWITGSFEFRDLFKIFSNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 254

Query: 80  EGRSPLT 87
           EG +P++
Sbjct: 255 EGPTPIS 261

[Close]
BLAST of CmaCh12G007810 vs. ExPASy Swiss-Prot
Match: Q2QD43 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhF PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 20  GLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 79
           GLYWT GSFEF+DLF+IFNNLI NNEVN LF+TLCAVLLFAGAVAKSAQFPLHVWLPDAM
Sbjct: 195 GLYWTTGSFEFRDLFQIFNNLIDNNEVNFLFLTLCAVLLFAGAVAKSAQFPLHVWLPDAM 254

Query: 80  EGRSPLT 87
           EG +P++
Sbjct: 255 EGPTPIS 261

[Close]
BLAST of CmaCh12G007810 vs. ExPASy Swiss-Prot
Match: Q2MIE0 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum bulbocastanum OX=147425 GN=ndhF PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 20  GLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 79
           G YW  GSFEF+DLF+IFNNLIYNNEVN LFVTLCAVLLFAGAV+KSAQFPLHVWLPDAM
Sbjct: 195 GFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVSKSAQFPLHVWLPDAM 254

Query: 80  EGRSPLT 87
           EG +P++
Sbjct: 255 EGPTPIS 261

[Close]
BLAST of CmaCh12G007810 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein )

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0 

Query: 20  GLYWTRGSFEFQDLFKIFNNLIYNNEVNLLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM 79
           GLYW  GSFEFQDLF+IFNNLI NN VNLLF+TLCA LLF G +AKSAQFPLHVWLPDAM
Sbjct: 195 GLYWITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAM 254

Query: 80  EGRSPLT 87
           EG +P++
Sbjct: 255 EGPTPIS 261

[Close]
BLAST of CmaCh12G007810 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0 

Query: 51  VTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGRSPLT 87
           ++L  +LL  GAV KSAQ   H W PDAMEG +P++
Sbjct: 218 ISLICILLLIGAVGKSAQIGSHTWSPDAMEGPTPVS 253

[Close]
BLAST of CmaCh12G007810 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0 

Query: 51  VTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGRSPLT 87
           ++L  +LL  GAV KSAQ   H W PDAMEG +P++
Sbjct: 218 ISLICILLLIGAVGKSAQIGSHTWSPDAMEGPTPVS 253

[Close]
BLAST of CmaCh12G007810 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0 

Query: 51  VTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGRSPLT 87
           ++L  +LL  GAV KSAQ   H W PDAMEG +P++
Sbjct: 218 ISLICILLLIGAVGKSAQIGSHTWSPDAMEGPTPVS 253

The following BLAST results are available for this feature:
BLAST of CmaCh12G007810 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B1NWJ63.6e-2783.58NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Manihot esculenta OX=... [more]
Q2VED34.7e-2785.07NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum tuberosum OX=... [more]
Q68RV96.1e-2785.07NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Panax ginseng OX=4054... [more]
Q2QD431.0e-2685.07NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=36... [more]
Q2MIE01.0e-2683.58NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum bulbocastanum... [more]
BLAST of CmaCh12G007810 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG01010.15.3e-2679.10NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein [more]
ATMG00060.11.5e-0452.78NADH dehydrogenase subunit 5C [more]
ATMG00513.11.5e-0452.78NADH dehydrogenase 5A [more]
ATMG00665.11.5e-0452.78NADH dehydrogenase 5B [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 20..83
e-value: 1.7E-13
score: 50.5
NoneNo IPR availablePANTHERPTHR42829NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5coord: 20..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G007810.1CmaCh12G007810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042773 ATP synthesis coupled electron transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0048038 quinone binding