CmaCh12G007630 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007630
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Reticulon domain-containing protein
Location	Cma_Chr12: 4767160 .. 4774916 (-)
RNA-Seq Expression	CmaCh12G007630
Synteny	CmaCh12G007630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCACTGAGGGTTGACGATGAACCAAATTGAGGGGAGGAGCGAGAGCTTGAAAGACGCAGAAATGGCGAATCGCTCCATCAGCTGCAAGACAGAAGTAGGCAAACCCCTTGTAGCTCTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCTCTCGTCGCGGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGTAAGCATACTCCAGTTTTTCTCTATGCTTGTAGGGTATTTTCTTGATTGGAGAATTCAATGTCAACGGAAATATTAGTCGGTTTCAATTTTTATGGATTTCTTTAAAGGAATGTTGTTGAACTTAGATCCTCCATCTTTATGCATATCTTTATCGTCGTTGTGATCTTGAACTCTAGTCTGTAAGCCAAATTCAATTGATTTTCAGTGTACCTGTGGATCCACTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTACTGAGAGTCGCAGCAACAGGGCATGACAAGAGGCTTTTTGTGAAGGTATTCCTCTTCTCCTCAATTTGTACGTTAGCACGCTTCTACTCGGTCTTGCTCTCGTTAATTTTTACATTAGTCCGTTTCTTCACAGTTTTGGTAAGTAATAACTAGACTTCCTTTCACTGAGTTTTAGGTTGTCGTATGTATTGGAATAGGAGCATCTGAAATTGCATACTAGCAAGAAATTCATTTGTTTTTAAAATCCAATATGCCTAGGACTTTTGAAGGTCTTCAGAGTAAATTGTACCATAGTCAAACTTGTGGCACCCGAAAGTATTTTGGCAACTTAACATTGGGTGAACCTGTACATGAATTAAGTTAGTACCTGCATAGGAACCTTAAACCCTTTGTGCATGGCATACTAAGAAGCATATACATGGATATGCAACGCAAATATGGCACAAAGGCATATATTTAACTATACGTGTGCTTGGATCTGTTAAAGTGCTATCAGAGCTTTGCTTTTGGGCATGTCATGGGTGAGGAAAATGGATAGTTGAATTTTTGCAATGAACACAAAAAGGTTAGGATCCACCCTCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAATGAAGTTCTTTGGTTGGCAGGTGTTGCGTGGGATGGCGAACACGTTGTTTCATTCTATAAACCCCTCCTTTTGTTACTTTTGATCAAAATCCACAAACTAATGCATTTATATTTTCAACATTATTCAAACGAGCATATTTCCGTCCAGATCTTTTCTTAGACTATCCTCAGCCATCTAACAAGTTATCAATAACCAACCTAGTCGATCAAATTAATTATCTCATATTAGAATCTTAGACTAACTAACTCTAACTTAAGAAAATAACAATAGTTAGAGAGAAAACGATACTAATTAAAAAATGAGAGTGAGATGGAGAGAGGGGAATCAAGTGAGGAGTGAAATGGAGAGCAAGAAGCATCCGAACTAGAAAAAGAGAGAGGAGATCAAAGGCTGAGAGAGAGCTGGCAGAAAGATAGAGAGAAAAGAAGAAGAAACTAGACATAGAGAGGGAAAACATAGCGACGGCAAACACTGTTTACAGCAACGACAAGGAATTTGCAAGCAGTTGTGTGGTTTTGATGCAACTTCGATTTGAAGAAGGGGGAGAAATGAAATAATTATAATAAACGTAAAATCCTAAATACAAAAGCCTTTGTGTTGAGGGTTTTAATAAATTTTTAAATAACAACTAACCTAAATGTACTGTTTTACTTAAAAATTAAAAAATAATTCAATAAGCCCTAAAGGTGTGTTGAGCGCCTTAGGGGTTTCATGGAAGGCGCGTGCCTTGGTCGTGCCTTCCTACCGGCTCCTTGATTTTTTGAGGCAAGGCGCTTCACATGCGACTTGTGCCTTTTAAAACTAGTATGACCAATGATGCACCAGCCTAGTTTCATGGGATGAAGTTCAATTCTTTCGTGGATAGACTTGAAAAAACTCTTATAGCTCAATTTTGAGCCACATGATGTGCTATATGAGCAATTCTTGAACCAGGAAGGAACAAAGAATTAATTATGGCAACAATTTGAAATTCTCGCCAACCCTCTACTGAACTTAATAGAGTTAGTACTAAAGGGAATAATGACAGGGAATATGCTTGAGAATAAGGCAGAGATGAGAGTGGTAATAACAGTGGACCTAGAAGCTATTGATGAAGGTAGCCTAGTTTGTGGAAGACTAATATGAACTCCATTGTTTACGGAAGGGGTTGAAAGAGACTACATTATCTGCATCTTTATTAATTTATTAGAACTTGTAGTTATCTTTTTAAATTCTTGGGTATTTTCCAAACTACCAGCATTGAAGAATGTTCTTGGAACCTAACTCTCCCACCTATGTGCATTATATATACTGATCTGGTTCATTTCTCTTTTTTTCCCCATTGAATTTTGTCAACGGAATTTGCATAACACAAATCTTTCCTATGGGCCAAAGTACCAGAATCTAACAAATTCTTGGACAGGGCTACCCGCCACTCAAATCATTATTGCTTGGTGGAAATTCAAGGTGTCAAGAATTTTGGAAGCTGGTCTTGGATAAGGTGGAAAAGAAGTTGTCTCTTGGAAAAAAATTTCTTTTCTAAAGGTGGTATGCTTACCCCAATCGGTCTTGAGTGGGATTCCCTGTTATTTCTTTTCGATCTTTAAGATTCACACTTTGGTTAGAGAGAGACTTGTGAGAGTGATGAGGATTTTTTTTTGTGAGAAGGGGGTTAAGGAGGAGCTGGGTGGGTCTCATCTTGTCAGTTGGGAGGCGATGGTTAAGCCTATGGAGTTAGGAGGGCTTGGAATATGGGATTTGAGGTTAAGTAATGAGACTCTCCTGTCTAATGGTTGTGCGATTCTTAATGTAGTCGGACACTTCATGCCATGAAATTGGACACTTTGTGGCAGTTATCCTTGGCAGATATGGTCCAGACCCTTTTGAGTGGGTTGTAGTGGTGGTACCAATAGGCCAGGCCTTCTAAACATCTCTCGTTAGCTATTGCCTTTGGTCTTCCTTTCTTTTCTCTTGTTAGTGTTCGATTGGTGATGACTCAACTGTATATTTTTGGTTGGTTGCATTGTCTAGCCTCTGATCCATCCTCATCTTTGTCTTTAAGGTTTCAGCTTCCTCAATTTGATAGGTAGGCGTTAAAGGTAGTGATCCTTCTTTCTATTCTTTGTGATCAGCATGTGGTTCAAGGGAGAAGGGGCATTAGATTTTGGTTCCTTGCTATTTTGAGGGGCTTCGCTTATAGCTCATTTTTTCATTTGTTGTCTATCTCTTCCTCGCCCCATCTTGTAATTTTTTTTTGTTGTGTGGTTTGTTTTACATGGGGAAGTGAATACTTTGGATAGCGTTTTGAGTGCCTCCCCCTTGGTGTTGTTCGTGCAGTGGTGCATTCTCTGCAGGCACCAGGCGGGTGATCTCTTTCATTTGTTGTCCAGTTTACCTAGTCTCTTTGGGATAGTTGGTTTACTTTGTTTGGTTTATGTTTGGTTTTGAATAGAGATTGTTTGACTTTGGTGGAGGAAGTGCTTCTAGGATCGTCTTTCTGTGATAAGGGAAAAGTTCTATGGCACTATAGTTCTTCGCTATTTTTTCGGGCATTTAGCTTGAGAAAAATAATAGGATATTTAGAGAGGTTGAGAGTTATTGTGATGCGGTTTGGGAGGTGGTGAAGTTTCATGCATCGTTGTAGCATCGTTTACTAGCCCTTTTTGTAATTATGATCTTGGTTTGATTTTTTTTTTCTGGATTAGAGGCCATTTCTTTATTTAGCTTTTTGGTTTCCCTTTTGTTGGTGGGGTTGTTTTTTTTTCAGTTTAATCTTCTTCTTAACTTCTGACAAAGCAGTTAATCAAGTTGATAGTTTTTGAAGCACATTAGATGCCACTCCTAAGGCTTCGAAGATCTGTTTTTTTCCTAAACCACTGACATCTTAAATGGACTGTTTTTCCAAACTGGCAGAGGCTTTGCCTCTCAAATCTTTGTCACTCCAATATAACAGAGAATAACATTCTGTTTTCCAGCCAACCTATTCATATAATCCTTGGCAGATGGAATAAGCCTACCTATCCCATCGCAATCCACCAATAAGGCCTAAGCAATTGCAAACCAGTCATCATTCCAATTTCTTCTAGTAATGACAAAGTGCAATCCTGTTAATTTTCCCAAAATCTATTTCTTTTCGTACCCAAAATTCCTTTTGCAACCTCTGCTTTACACAAAAGAAGGAAGGCATCAAATATGTCATTTTGAAAATATTACAAATCCTCTCCAAAACAAGCTTGGTGCTTCCTTTTCATGAACTTTCCCCTCTTTTCTTCAATAATCTCCCAAAAAGAAGACCCCTCATTTGTTTTTTTCCAAAAGGGATAACAATTCTTCTTTTTCTAGGTCTTTAACTAACTCACTGTCCATGGAGATTGAAGAAGCTCCACCAGAGACATTTGTAATTAAAACGTAGTTCCAGCTTAGTCTAATGTAAAAAAAATGTAGAGATTCCTTCTCTCCGGCTAAAAAACAGAACCGCAAATTGCAGGGAACACCCAAATTGAAAGCTATATCTTAATTGCAAGCTATAATTTTGATCTTTTGCACATAATTACCTACTTTGCTTCACTGCATGACTTAGTCTCATCTACTTTTAATTATCCTCTGCATCGATGGTATTTTTGCATATTAGACTAATAACTACTCTGAATATTGGATCTATGACCAAAATGCATACTTGTTTCTTTTACCATTCAGATGATTGTCAATTACAACCTTTTTTTTTTTAACTAATACCAATTAGAAGGTCTTTTTGTAATCACGTTAGGCTGAGTTTGGGTTACAATATATTGCTTTCCTAAATCCTTTTCTTTACCCGGACATTTTGGAATAAACATTTTCCTTGTTTCTAATGAAAAAAAGCTTTGTATGCTAGCGCTTTCATGCTGGATCTAGTGAACCTAGACAAATTCGTATGAACATGTTTGATTGTACGTAAAATTCAAACTTCTCTTATAATCCACCCTAGAGATGTTGTATTATAAAAGTAAGGTTAAATTATAAGTTCATAAATCTTCAAGCTTGTGTCTAATAGATTCTTGAACTTTCAATTTTGTGTTTAGTAGGTTCTTGAACTTTCAATTTTGTGTCTAATAGGTTATTTTAAAAAATTAATAGGCCTTATTAGACACAAAATTGGATTTTGTGTCTAATAAGACTGTAACTTTTATTTTTGTAGACAACTTTCATGTATTTAAAAAAAATATCAGACGGATCAAAGACCTATTAGACACAAAATTGAAAGTTCATGGATTTATTAAATACCAAGTTGAAAGTCCACGGACTAATTTGATGTAAAATTGAAAGTTCAAGGAAATGGAATAAGCCTATCTATCAGATAAATTGTATACTCGAGATGCTTGTGCATTTAGAGAGTTGAGAAGATAATGAAAATCAAGTAATACGTATTGATTTTCATTGACAAACGAAGATGTTCCATCATAATATATTTTTTTCCCATGGTATATTTACCGGTTTATATTTGACTTTGTTTGTGAGCGAAGTTGCTCTTCCTACTAAGATCTTTCCGAACCATCTTCTTAAAAGGAATAGCTGTATTCGTCTCTCATCTTGTGATGGATATTGTAAATTAAAGTTGCGTAAATCTTTCTCCAGGTCATTGTCAGTCTTTACGCTCTCTCAGTCCTTGGAAGACTGGTTTCAGGTGTTACGGTTGCCTACACTGGTATGTTTCCTACTACAACTTGCCCCAATTTCTGCTATCCTATGAGAAAAGAAATATTTCTTGACAATTTGATATGAATTTTTGGTTTAGATACTATTTCAGTCCATTTACTTTGTTAGTTTGCTTTGGTCCCTATTCATTTAGAATGTTCATTTTGGCCCATGTACTTTTAACTTTTAACTTTTGTTCATTTATTCCTTGTTCTTTCCAAAAGTCTGCTTTGGTCCTTATATTTGTAAAATGTAACCATTTTTATCCTGGTTAGCAAAATTCTCACAAATTAAACTATTCAGCACAAAACTGTGACACATTTCAACTAATTTATTGTGTATTGGTGGGATGAAATTGTGATAAAACAATGAGTCAAAAAAGAAAAGAGCCAAAGTGAGTATAGGAACCCAAACGAATGTTTCGAGAGTACAAGGAGACTACCATGGACAATGTTGAAAGTAGAGGGACCTAATTGAATATGTTGAAGGAGCAGAAACCAAAATTGACAAAAGTTGGAAGTATGATGACTACATAGTATTTTAACCGACATTTTTCTATTATTAATATTTAATTCCTCTTCGACTCATCATATAGGGAGCGTAGTAGCTTAATTAGCCTTACCATCTGATTTTTCGGATAGCAGAGGTCAACCTATGTGCAATTTTTTCCTTTGTGTTAAAAATTTTCAGGGCTCATTTCTGTTTATATTAGGGAATAAATTGGATTGTTTTTGCTTATTTATGGAACCAATCTGTCATTGAAGCTAAGAGATCTGAATCAACAGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAATCAATCAGTGCTTTTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTATTTCACACCAAGATTCCATCTAATCTTCACTGGCTGTAACCCCGTTCTGTCACTGTAGATAGATACATCTTGTGCATATTACCGTTAACAGAATCAGACAGTCATTATATGATGGTTGTTTAGGTGGAGTAATAAATTTATATTTGATGGGGAAAAAAAAAAAAATAAAAAATCCTGAGTTCATTATTGATATTGATTACTGTTCATCATTACGAGTATCGGTTGTTTTCTGTGAAGTTGAGTGGTGTGAAAAAGAAAATATTTGGCAGGATTGTCATTTGGGTTATACCTTTTTTGTACCAACTTTTAAGTTATAAGGAGATGGAAACTTGTTCAGGAGCTAGTTCTGAATTCTCCTTTTTTGTACCTTTTTTGT

mRNA sequence

AATTCACTGAGGGTTGACGATGAACCAAATTGAGGGGAGGAGCGAGAGCTTGAAAGACGCAGAAATGGCGAATCGCTCCATCAGCTGCAAGACAGAAGTAGGCAAACCCCTTGTAGCTCTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCTCTCGTCGCGGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCTGTACCTGTGGATCCACTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTACTGAGAGTCGCAGCAACAGGGCATGACAAGAGGCTTTTTGTGAAGGTCATTGTCAGTCTTTACGCTCTCTCAGTCCTTGGAAGACTGGTTTCAGGTGTTACGGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAATCAATCAGTGCTTTTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTATTTCACACCAAGATTCCATCTAATCTTCACTGGCTGTAACCCCGTTCTGTCACTGTAGATAGATACATCTTGTGCATATTACCGTTAACAGAATCAGACAGTCATTATATGATGGTTGTTTAGGTGGAGTAATAAATTTATATTTGATGGGGAAAAAAAAAAAAATAAAAAATCCTGAGTTCATTATTGATATTGATTACTGTTCATCATTACGAGTATCGGTTGTTTTCTGTGAAGTTGAGTGGTGTGAAAAAGAAAATATTTGGCAGGATTGTCATTTGGGTTATACCTTTTTTGTACCAACTTTTAAGTTATAAGGAGATGGAAACTTGTTCAGGAGCTAGTTCTGAATTCTCCTTTTTTGTACCTTTTTTGT

Coding sequence (CDS)

ATGAACCAAATTGAGGGGAGGAGCGAGAGCTTGAAAGACGCAGAAATGGCGAATCGCTCCATCAGCTGCAAGACAGAAGTAGGCAAACCCCTTGTAGCTCTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCTCTCGTCGCGGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCTGTACCTGTGGATCCACTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTACTGAGAGTCGCAGCAACAGGGCATGACAAGAGGCTTTTTGTGAAGGTCATTGTCAGTCTTTACGCTCTCTCAGTCCTTGGAAGACTGGTTTCAGGTGTTACGGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAATCAATCAGTGCTTTTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTATTTCACACCAAGATTCCATCTAA

Protein sequence

MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI

Homology

[Close]

BLAST of CmaCh12G007630 vs. ExPASy Swiss-Prot
Match: Q8GWH5 (Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 110/161 (68.32%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 26  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK +  LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVT 145
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKV++ LY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 146 VAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDS 187
           VAY GLC+ C+ M+ + S+S+   +   L+RGN  I  Q++
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQEA 160

[Close]

BLAST of CmaCh12G007630 vs. ExPASy Swiss-Prot
Match: P0C941 (Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.2e-49
Identity = 98/138 (71.01%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 26  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK +  LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVT 145
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKV++ LY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 146 VAYTGLCMLCIYMVLENS 164
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

[Close]

BLAST of CmaCh12G007630 vs. ExPASy TrEMBL
Match: A0A6J1I734 (reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471842 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180

Query: 181 ISHQDSI 188
           ISHQDSI
Sbjct: 181 ISHQDSI 187

[Close]

BLAST of CmaCh12G007630 vs. ExPASy TrEMBL
Match: A0A6J1GJ96 (reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454742 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180

Query: 181 ISHQDSI 188
           ISHQDSI
Sbjct: 181 ISHQDSI 187

[Close]

BLAST of CmaCh12G007630 vs. ExPASy TrEMBL
Match: A0A0A0KQM7 (Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.6e-85
Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+ 
Sbjct: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNER 181

Query: 181 ISHQDSI 188
            SHQD I
Sbjct: 182 TSHQDDI 188

[Close]

BLAST of CmaCh12G007630 vs. ExPASy TrEMBL
Match: A0A1S3CPH6 (reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.6e-85
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+ 
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180

Query: 181 ISHQDSI 188
            SHQD+I
Sbjct: 181 TSHQDAI 187

[Close]

BLAST of CmaCh12G007630 vs. ExPASy TrEMBL
Match: A0A6J1D9M0 (reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.0e-78
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           M+QI  RSES    EMANR+I   T++GKP+VALICGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 2   MSQIGRRSES----EMANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLF+KV+V LYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S  + PF RRGNDP
Sbjct: 122 KRLFLKVVVCLYALSVLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDP 181

Query: 181 ISHQDSI 188
            SHQD+I
Sbjct: 182 TSHQDAI 184

[Close]

BLAST of CmaCh12G007630 vs. NCBI nr
Match: XP_022952032.1 (reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 reticulon-like protein B22 isoform X1 [Cucurbita maxima] >XP_023536692.1 reticulon-like protein B22 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6585840.1 Reticulon-like protein B22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180

Query: 181 ISHQDSI 188
           ISHQDSI
Sbjct: 181 ISHQDSI 187

[Close]

BLAST of CmaCh12G007630 vs. NCBI nr
Match: KAG7020756.1 (Reticulon-like protein B22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 187/231 (80.95%), Postives = 187/231 (80.95%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVK--------------------------------------------VIVSLYALSV 180
           KRLFVK                                            VIVSLYALSV
Sbjct: 121 KRLFVKVFLFSSICTLARFYSDLISLTCTLVCFFTVLVLRGMVNPLYSIHVIVSLYALSV 180

Query: 181 LGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 188
           LGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
Sbjct: 181 LGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 231

[Close]

BLAST of CmaCh12G007630 vs. NCBI nr
Match: XP_038889154.1 (reticulon-like protein B22 [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.1e-86
Identity = 168/187 (89.84%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           M+QI  R+E L++ EMANR+I+CKTEVGKP VALICGSL+YYHCAYRNSSLLSLVADVFI
Sbjct: 1   MSQIGRRNEGLRETEMANRTINCKTEVGKPFVALICGSLIYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMVAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPF+RRGNDP
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFIRRGNDP 180

Query: 181 ISHQDSI 188
            SHQD+I
Sbjct: 181 TSHQDAI 187

[Close]

BLAST of CmaCh12G007630 vs. NCBI nr
Match: XP_008465703.1 (PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+ 
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180

Query: 181 ISHQDSI 188
            SHQD+I
Sbjct: 181 TSHQDAI 187

[Close]

BLAST of CmaCh12G007630 vs. NCBI nr
Match: XP_011655303.1 (reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Csa_009004 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60
           M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+ 
Sbjct: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNER 181

Query: 181 ISHQDSI 188
            SHQD I
Sbjct: 182 TSHQDDI 188

[Close]

BLAST of CmaCh12G007630 vs. TAIR 10
Match: AT1G78895.1 (Reticulon family protein )

HSP 1 Score: 214.2 bits (544), Expect = 9.2e-56
Identity = 110/161 (68.32%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 26  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK +  LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVT 145
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKV++ LY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 146 VAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDS 187
           VAY GLC+ C+ M+ + S+S+   +   L+RGN  I  Q++
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQEA 160

[Close]

BLAST of CmaCh12G007630 vs. TAIR 10
Match: AT1G16825.1 (Reticulon family protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.8e-50
Identity = 98/138 (71.01%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 26  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK +  LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVT 145
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKV++ LY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 146 VAYTGLCMLCIYMVLENS 164
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

The following BLAST results are available for this feature:

BLAST of CmaCh12G007630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWH5	1.3e-54	68.32	Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1	[more]
P0C941	8.2e-49	71.01	Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1	[more]

BLAST of CmaCh12G007630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I734	2.7e-95	100.00	reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147184...	[more]
A0A6J1GJ96	2.7e-95	100.00	reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A0A0KQM7	9.6e-85	89.30	Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 P...	[more]
A0A1S3CPH6	9.6e-85	89.84	reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE...	[more]
A0A6J1D9M0	3.0e-78	83.42	reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 S...	[more]

BLAST of CmaCh12G007630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952032.1	5.5e-95	100.00	reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 retic...	[more]
KAG7020756.1	1.3e-88	80.95	Reticulon-like protein B22 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038889154.1	2.1e-86	89.84	reticulon-like protein B22 [Benincasa hispida]	[more]
XP_008465703.1	2.0e-84	89.84	PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]	[more]
XP_011655303.1	2.0e-84	89.30	reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Cs...	[more]

BLAST of CmaCh12G007630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78895.1	9.2e-56	68.32	Reticulon family protein	[more]
AT1G16825.1	5.8e-50	71.01	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 32..156 e-value: 5.9E-16 score: 58.8
IPR044177	Reticulon-like protein B22/B23	PANTHER	PTHR47879	RETICULON-LIKE PROTEIN B22	coord: 15..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G007630.1	CmaCh12G007630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane