CmaCh12G007600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ribosomal protein S3
Location	Cma_Chr12: 4733692 .. 4741111 (-)
RNA-Seq Expression	CmaCh12G007600
Synteny	CmaCh12G007600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCGAAGACTTTCGAGAACAAATATTGGATCGAGAAAAAAAAAAAGGGGAGAAAGTCAAGTCTAAGCGCATATGGCACGAAAAGGAAATCCAATTTCGGTAAGACTTGATCTGAATCGTAGTTCAGATTCAAGTCGATTTAGTGAGGGCGACCGTGAAAGTCACCGAATGGGTCTGTCTTTTCCTTCAGTTTGTCCTATATTGAAAATCAAAAAAAGCGTAGGAGGATATTGCAGATGTCCAGGACGGACACGACTTCTTCTAATGCTAGAAGACCACTGGAGGACACCCGAGACTAGAGCATGTCGTGAAAGAAGCACACTAGCCGTGCTTCGACCGTGTCTCAGGGGCACAGTTGAATGCAGATATCATGAACGCGAGGTGCAGGAGACTGGGCCGAGAAACCCGGGCAACCACTCCCCTATGTGCTAATCACTAGCGCATCCAGGGCCCCGGCGCCAAGCGGAGCTGGAGAGGCCTAGCCTGATCTGAGAAGTGCTAATTCGGTTCGTCTCGACTTCATTCAAGAACACGGCCCCTAGAATCAATAAGAAAACAAGTGCTAAGTTTCAGATCAGTGAATAAATCGAAACAAAAGAAGAGACCTTTCTCGCTCGGTGCCTAAAGTGCACTATGCTCCCCTTCAACAAATGAGAGTTTTCGGTGGAACCGGTGAATCACATGAGCAGGCAGGTTAGATGCGTGGGACAGAGGGCTCGTAGTACCTGCTAGCGCAACTATGCAGTGGAAGGGAAGGAGCTTAAATCGACCCCCTTTTTTCTTTGATAAAAAAATAGTACAAAGAGATTAGACTCTTGGATGAGACTAAGCAGCCACCGACCGTTTCGACGCGCCTCTGACCTATCTTGATTAAGACCAAACAAACAAAACCTATAAAAAATGGAGCCTAGTTTAAGCTGTCAAACAAATAAATGAGAGAATGGAAAATGATGAATATCCACTAGTAGGGATATATATAGATTTAGTCTCTCTCAGTAAAGAGAGTTGTAGATTTGTAGGAAAGGAGAGGAGCGAAGCTGCTTTACTGAGGGGAGAAGAGCCTTGAGAAACTATTAGTAAAGCGTTGACGCGCCCCTATCATCTTTTTAAAGCAACAAGCGAAAAAGTTGCCCCTTTTTCAATAAAAAAAAAAGGAAAGAAAGAAAGAAGAAGGGCCAACCAACTATTAGAATATTAGTAAAGGCGCCTTAGCCTATCTCTCGATATAGTCAGGGTTTTTTTCTTGCTCGTTAGCGCTCCCTTCCTTACCCCCCTATAAAAGGTTTTGCATAAAGGTAGCTTGTCTATGCTTTTTGAAAACCTGACTCTGACTACTACTAATAATGAAGGGGCTTCTTTCTTCAAATATCCTATAAAAAAAGTTGGGGCTGAAAAGCTTTGAGTTTAGGGCAGGTTTGGAACCCTATACAAGGGGCTTTTCCTTTCAAATGACACCTCTTCCTGTGCGAGGGCGTTGCACGAAACCAAACCACTCCCCCGCCCGATCAATGTTGAGATATGATTGAAAGTATTAAAAAAGATATGATTCAGAATAATTGAGATATGATTCAAATATTCAAACTACCAAGATTTTAGGAGATTGTTAGTAGATTTGAATTTTTCTAGATTTCAATGATTTACTATTTCTGGTCCAGTGTATAAGCTATAAATACGGGAATTGTGTAACCCTCTAAGCATCAAGTCAGTAGACAATAATAAAGCACTGCAGCATTCATCTATTCTATCTATTCTTATCTCTTTCACTATCCCTTTTTTCAACAAATTTGGTATTAGAGCCAAGTTCGTTCGACACGAGGGCGAGTGATTATTTTTTTTCACAAAACAAAAATGACAGTAGCTGGCTTTTCTTCCTCTGCACCGTTGTTACCGATCTTCAATGGTGAGAAATATTAGTGGTGGAGCATCAAGATGAAGACCTTGCTCAGATAGTAGGAGCTATGGGACTTGGTGGAGCACATGTTTGTTGATGTATTAGAACCCACAATAGAAGAAAAGGAGAGACTAAGAGAAACCAAGAAAAACGATGCCAAGGCTTTATTCATTATTTAGCAAGCAGTTCATGAGACTATCTTCTCACGAATTGCAACAGCAACCACATCAAAGCAGGCTTGGTCAATTCTACAGAAGGAGTTTTTAGAAGATTCAAAGGTCATGACAGTGAAATTGCAATCTCTAAGACGTGATTTTGAAACTCTACTTATGACGAATGACAAATCAATTGCTGATTTTTTGTAAAGAGCAATGACAATAGTCAATCAGATGCGTACCTATGGAGAGAACATTTCAAACGAAACAATTGTTGCAAAGATGTTGAGAAGCTTGACTCCAAAGTTTGACCATGTGGTGGCTGCCATAGAAGAAGCTAAGGATCTATCCATACTCTCCGTTGATGAATTGATGGGCTCGCTTCAAGCCCATGAGGCAAGAATCAATAGAGCATAAGAAAGGAACGAAGAAAAGGCACTACAGGTGAAGGAGACAACCAACAACAAAAACAACGAAAGAGAAAATATTCATTTAGCAGGTAGAAGTGGAGGATTTCACAGCTTCCATTGTGGTCGTGATAACAGGGGTAGATGGAGAAGTGATGGACAGAGACAATTCAATGAACAAAGGAATGTCATACAATGTTACCATTGCAGAAGGTATGGGCACACAAAATCTGATTGTTGGTATAAAAATCAACGAATGAATTTTGCAGCAGAGAATGAAGAAGAAGAAGAAAAGCTACTTATGGCGTGCATGGATACTAATCCAAAAAAGGGTGACTTATGGTTTGTTGATAGCGGATGCTCGAACAATATGACAGGCACCAAATCTTTACTCAAAAAGCTTGATGAGATGCAAAAAATTAAGGTGCAACTTGGAAACACAAAAGAGATGCAAGTTGAGGGAAAAGGTACAATGAAAGTCGAAACCAGTCAAGGTAAGATAAAACAATTAGATAATGTTCCATTTGTACCTGATTTAGGGTATAATTTATTGAGTGTTGGACAATTGATGACAAGAGGACATTCAGTTCTATTTGATGACAACACGTTTCATTACACATAAGAAATTAGGCCATAAAGTTCAAATTGCCATGACTTCAAATAAGATGTTTCCACTTGATATTTCTAACATGGAGGATTTTGCTTTTGCTGCTAGCACGAAAGATGACTCAACATTATGGCATCTCAGATATGGACATCTTCATATGAATGACCTGAAAATATTCAGGAATAAAGATATGGTTTTCGGATTACCAAGAATTGACTCAACTAATTTATGTGAAGGATGCATTTATGGCAAGCAGGCTAGAAAGTCCTTTCCTATTGGAAAAGCTAGAAGAGCTTCACATTGTCTATTATTAATTCATGCTGATTGATGTGGGCCAATGCAAACTAAGTCCTTGGGTGGGAGTATATATTTTTTACTATTCATTGATGATTATAGTCGCATGAGCTGGGTCACTTCCTACAACGTAAGTCAGAAACTTTTCAGAAGTTCCAGATTTTTAAAGCTATGGTAGAGAACCAAAGTGGCTGTCACATCAAAGTTCTTGGAACAGACAGAGGTGGCGAGTTCATATCTAAAGAGTTCAATCTGTTTTGTGAAGAAGAGGGCATCCAAAGGGAATTAATAGCCCCCTACACTCCAGAACAAAATGGAATCGCTGAACGAAAAAATCGAACTATTGTGGAGATGGCAAGAAGTATGTTACAAGCAAGGAGACTTCCAAACCAATTTTGGGCAGAAGCCGTAGCAACATCTGTTTATCTATTAAACATCTTACCAACAAAGGCGGTTATGAATCGAACTCCTTATGAAGCATGGCATGGAAGGAAACCAATTGTAAGTCATTTACGAATCTTTGGTTGTGTTGCTTATGCTTTGAAACATCCTCAAATTCATCAAAAGCTTGATGAAAAATCTGAAAAATGCATTTTCATTGGCTATTGTACTCAATCAAAGGCATATAAATTATACAACCCCATCACTGAAAAGATTTTAGTTAGAAGGGATGTAATATTTAATGAAAATGTGAGTTGGAATTGGAGTAAAGAATAAGAGCAGCAAAAGATTACAGTTAAAGTTTCTCAAAATGAAAAGACAAGGGTCAACTCCAGTGCATCTCCTAGTGCCTCCACTGCAACACAAAATGTGTCAAATTCATCATCTTCAGCATCACTAAACAACGATTCTTCTCTTGAAGAACTTTCGGATGAGACACCTCCAAAGAAGTATAAATTTTTAACTGACATATATGCATCATGTCAATTTGCTCTTACTGTTTCAGATCCTATGAGTTATGAAGAAGTAGCTGAAAAAGAAGAGTGGAAGAAAGCCATGGTAGAAGAGATGCAGTCCATTGAGAAAAAGGGAACATGGGAGATGGTTGACTTACCAAACGAAAAAAATCAATCAATTTAAAATGGGTGTTCAAGACAAAATTTGCACCAGATGGAAGCATACAAAAGCATAAGGCCCGTCTTGTAGCAAAAGGGTATGCACAACAACAAGGTATAGATTTTGAAGAAACTTTTTCTCCAGTAGCTCGTTTTGAAACTGTAAGAACTATTCTAGCATTAGCAGCAAAATTACGGTGACCGGTTTATCAGTTTAATGTTAAGTCAGCATTTCTTAACGGAGATTTACAAGAAGAGATTTATGTAGCACAACCAGAAGAATTCATAAAGAAGGACAAAGGAACAAAGGTATACAAGTTGAGAAAGGCACTATACGGATTAAAGCAGGCCCCTCGAGCTTGGTACAACAAGATTGATGAGTATTTTCAAAAGAAAGGATACATGAGAAGTGAGAATGAGCCTACTTTATATGTGAAGAAGGAAGGTAAAAGTGATTTCATTATTATTTGCCTCTATGTTGACGATATGATTTACACTAGCTCTTCTAACTCTCTTTTGGATAAATTTAAGTCTCAAATGAGAAGTGAATTTGAGATGTCAGATATGGGTCTATTACACTATTTTCTTGGTCTTGAAGTACATCAAGTTGAGGATGAAATTTTTATTTCACAAAGAAAATATGCCAAAGATATTATGAGTAAATTTGGTATGCTTAATTGTAAGCCTGCAGCTACACCTATGAATATTAATGAGAAATTACAACATGATGATGGAGCAGAAATGACAGATGCTAGAAGGTTCAGGAGCTTGGTTGGCGGATTAATTTATTTAACTTACACACGACCCGACATTGCATTTCCTGTTGGTATTATTTCTAAGTTTATGCAACATCCTTCAAAGGTTCATTATGGAGCAGCAAAAAGAGTCTTACGTTACATTGCCGGAACTATGGAGTATGGAATTTGATATTCTAAATCCTCTAATTAAACTATATGGATTCACTGATAGTGATTGGGCAGGATCATTAGATGATAGACGAAGCATTTCAGCCAATGTTTTCACTTTAGGGTCAGGAGCGATCACTTGGAGCTCAAAGAAGCAAGTAACAGTGGGGTTGTCAACGTCAGAAGCAAAATATGTTGCAGCAACTTCAGCAGCGTGTCAAGCTATTTGGCTAAGAAGAATGTTAGCTGATCTTCAACAAGAGCAAAAAGGGGCAACAAAGATATTTTGTAATAATAAAGCAACTATTTTTATGACAAAGAACCCAACGTTTCACAGTAGAACAAAACATATTGAACTTCGACATCACTATATTTGTGATCTTGTTGCAGATGAAGAAATTGTCTTGGAGTATTCTAACACCGATGAACAGCTAGCGGACATACTTACCAAGGCTTTGTCAAAAGAAAAGTTTTGCTACTTCAGACGATTACTTGGCATTTGCAATTTTGAATCAAGGGGGAGTGTTGAGATATGATTCAAAGTATTCAAAAAAATATGATTCAGAGTTATTGAGATATGATTCAAATATTCAAACTACCAAGATTTTAGGAGGTTGTTAGTAGATTTGAATTTTTCTAGATTTCGATGATTTACTATTTTTGGTCCAGTATATAAGCTATAAATACGGGAATTGTGTAACCCTCTAAGCATCAAGTCAGTAGACAATAATAAAGCACTGCAGCATTCATCTATTCTATCTATTCTTATCTCTTTCACTATCCCTTTTTCCAACAATCAAGTACCTGTTGCTTTGCTGGTAGGCCCACTTAGGTTAGGGGCATTGTCCCTCAGTTCTTACCAACCTCCGGGGTGTTATCGACATGTTGCTAGCTTCAACTTGGTGGAATAAGGATCATTGATTCCCTTGTCTATTTCTTATTCATTCATAGCATTCGGCCGGTGCGTGCTCCTTTCTCAAACCAGAACAACTCTGAACGTTAGGGAAGATAAGGGAAGACCACCTGAGCGAACCGACCGAAGGGACTTGACTTATTCGAACCGAAGGATAGCTGCTTCAAACTCAGCCTATCACGAGTAGCCTCACTGCTTGATCGGCGGGGAGGAGCATCTCAAAGTATGGGGCAAAGGATCAAGCGCTTTGACTTTGTCTCCTGGGGGGATCCACCAAAGGTTGGGTTTGAGAGCCGTGTGATGGGTGACAATCTAGCACGGTTCGGAGAGCAAGCACTTTTAGTCTACGTTGGTGAATAGAATCCCCCCCTATCAAGTCAAGCAAGAAAGAAGCGGCTCTTCCCACGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCACTATATCAAGATGTCAATCTAAGATCTTATTTCGGTTCGATACGTCCACCTACGAGACTGCCATTTGGCTTTCATCTTGGTAGATGTATTATTTTACATTTTCCTAAAATCACATTCAATCATTTCTTTCTTCCTCGTCGACTACGACGACTAAAACGACGCGTAAAATCCAAACCCGGAAAGGATCAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGACGATACAGAAGAAGAACGAAACAAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTGGAGTCGATCAGGTTCGACGACCGAGAAAAGCAAAACGAAATGAGGAATTGGCCAAAAAAGAAGGAACGCTATGGATACCATGACTAATCACCATCGAGAAAGAAGAATTTTTCTAAATCACTTCGCATCAGCGGGGCCTTCAAGCATCCGAAATACGTCGGAGTTGTAAATGACATAGCGTTCCTGATCGAAAATGACGACTCCTTCAGAAAAACAAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTTCGACGTGCCGACGAGTCATCTACTTAAAAGAACCCTCCCCGCTGTGCGCCCGTCCTTGAATTATTCAGTCATGCAATACTTATTGAATACAAAGAAGAAAATGCATTTCGACCCCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTAAACCATCTACGATGGGGGGAGCGAATACATAG

mRNA sequence

ATGGAAGCGAAGACTTTCGAGAACAAATATTGGATCGAGAAAAAAAAAAAGGGGAGAAAGTCAAGTCTAAGCGCATATGGCACGAAAAGGAAATCCAATTTCGATGTCAATCTAAGATCTTATTTCGGTTCGATACGTCCACCTACGAGACTGCCATTTGGCTTTCATCTTGGTAGATGTATTATTTTACATTTTCCTAAAATCACATTCAATCATTTCTTTCTTCCTCGTCGACTACGACGACTAAAACGACGCGTAAAATCCAAACCCGGAAAGGATCAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGACGATACAGAAGAAGAACGAAACAAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTGGAGTCGATCAGCGGGGCCTTCAAGCATCCGAAATACGTCGGAGTTGTAAATGACATAGCGTTCCTGATCGAAAATGACGACTCCTTCAGAAAAACAAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTTCGACGTGCCGACGAGTCATCTACTTAAAAGAACCCTCCCCGCTGTGCGCCCGTCCTTGAATTATTCAGTCATGCAATACTTATTGAATACAAAGAAGAAAATGCATTTCGACCCCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTAAACCATCTACGATGGGGGGAGCGAATACATAG

Coding sequence (CDS)

ATGGAAGCGAAGACTTTCGAGAACAAATATTGGATCGAGAAAAAAAAAAAGGGGAGAAAGTCAAGTCTAAGCGCATATGGCACGAAAAGGAAATCCAATTTCGATGTCAATCTAAGATCTTATTTCGGTTCGATACGTCCACCTACGAGACTGCCATTTGGCTTTCATCTTGGTAGATGTATTATTTTACATTTTCCTAAAATCACATTCAATCATTTCTTTCTTCCTCGTCGACTACGACGACTAAAACGACGCGTAAAATCCAAACCCGGAAAGGATCAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGACGATACAGAAGAAGAACGAAACAAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTGGAGTCGATCAGCGGGGCCTTCAAGCATCCGAAATACGTCGGAGTTGTAAATGACATAGCGTTCCTGATCGAAAATGACGACTCCTTCAGAAAAACAAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTTCGACGTGCCGACGAGTCATCTACTTAAAAGAACCCTCCCCGCTGTGCGCCCGTCCTTGAATTATTCAGTCATGCAATACTTATTGAATACAAAGAAGAAAATGCATTTCGACCCCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTAAACCATCTACGATGGGGGGAGCGAATACATAG

Protein sequence

MEAKTFENKYWIEKKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESISGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGGANT

Homology

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BLAST of CmaCh12G007600 vs. ExPASy Swiss-Prot
Match: Q04716 (Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.0e-92
Identity = 176/242 (72.73%), Postives = 184/242 (76.03%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKRR KS+P K++
Sbjct: 34  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRREKSRPVKEK 93

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI-------------------- 154
           GRW AFGKVGPIGCLHSSD TEEERN+VRGR A KRVESI                    
Sbjct: 94  GRWGAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQG 153

Query: 155 --------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQS 214
                               SGAFKHPKY G+ NDIAFLIENDDSFRKT LFKFFFP +S
Sbjct: 154 YGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKS 213

Query: 215 RFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGG 237
           R D PTSHLLKRTLPAVRPSLNYSVMQYLLNTK K+HFDPVVVLNHFVAPGVA+PSTMGG
Sbjct: 214 RSDRPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGG 273

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BLAST of CmaCh12G007600 vs. ExPASy Swiss-Prot
Match: P27754 (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3 SV=2)

HSP 1 Score: 338.2 bits (866), Expect = 7.6e-92
Identity = 173/242 (71.49%), Postives = 183/242 (75.62%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKR  KS+PGK++
Sbjct: 35  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRGKKSRPGKEK 94

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI-------------------- 154
            RWW FGKVGPIGCLHS+DDTEEERN+V GR A KRVESI                    
Sbjct: 95  ARWWEFGKVGPIGCLHSNDDTEEERNEVGGRGAGKRVESIRLDDREKQNEIRIWPKKKQG 154

Query: 155 --------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQS 214
                               SGAFKHPKY GV+NDIAFLIENDDSFRKTKLFKFFFP +S
Sbjct: 155 YGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKS 214

Query: 215 RFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGG 237
           R D PTSHLLKRT PAVRPSLNYSVMQY LNTK +MHFDP+VVLNHFVAPGVA+PSTMGG
Sbjct: 215 RSDGPTSHLLKRTPPAVRPSLNYSVMQYYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGG 274

[Close]

BLAST of CmaCh12G007600 vs. ExPASy Swiss-Prot
Match: P27928 (Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 8.4e-91
Identity = 179/262 (68.32%), Postives = 189/262 (72.14%), Query Frame = 0


Query: 12  IEKKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFN 71
           ++  +    S  S Y   +    DVNLRSYF SIRPPTRL FGF LGRCIILHFPK TF 
Sbjct: 12  LDLNRSSDPSRFSDYYYGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGRCIILHFPKRTFI 71

Query: 72  HFFLPRRLRRLKRRVKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRV 131
           HFFLPRR  RLKRR KS+PGKD+GRWWAFGKVGPIGCLHSS+ TEEERN+VRGR A KRV
Sbjct: 72  HFFLPRRPLRLKRRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRGAGKRV 131

Query: 132 ESI-------------------------------------SGAFKHPKYVGVVNDIAFLI 191
           ESI                                     SGAFKHPKY GVVNDIAFLI
Sbjct: 132 ESIDREKQNEIRIWPKKMQRYGYHDRTPSRKKNFSKSLRVSGAFKHPKYAGVVNDIAFLI 191

Query: 192 ENDDSFRKTKLFKFFF-PNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFD 236
           ENDDSF KTKLFKFFF P +SR D PTSHLLKRTLPAVRPSLNYSVMQY  NTK KMHFD
Sbjct: 192 ENDDSFIKTKLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHFD 251

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BLAST of CmaCh12G007600 vs. ExPASy Swiss-Prot
Match: Q95749 (Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS3 PE=1 SV=3)

HSP 1 Score: 311.2 bits (796), Expect = 9.9e-84
Identity = 169/264 (64.02%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 14  KKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHF 73
           K +    S  S Y   +    DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HF
Sbjct: 14  KNRSSDSSWFSEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 73

Query: 74  FLPRRLRRLKRRVKSKPGKDQGRWW-AFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVE 133
           FLPRR RRLKRR K++PGK++GRWW  FGK GPI CLHSSDDTEEERN+VRGR A KRVE
Sbjct: 74  FLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEERNEVRGRGARKRVE 133

Query: 134 S----------------------------------------ISGAFKHPKYVGVVNDIAF 193
           S                                        ISGAFKHPKY GVVNDIAF
Sbjct: 134 SIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKLLRISGAFKHPKYAGVVNDIAF 193

Query: 194 LIENDDSFRKTKLFKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHF 237
           LIENDDSF+KTKLFK FF N+SR D PTS+L  RTLPAVRPSLN+ VMQY  NTK +++F
Sbjct: 194 LIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFLVMQYFFNTKNQINF 253

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BLAST of CmaCh12G007600 vs. ExPASy Swiss-Prot
Match: P49386 (Ribosomal protein S3, mitochondrial OS=Brassica napus OX=3708 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.0e-81
Identity = 167/264 (63.26%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 14  KKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHF 73
           K +    S  S Y   +    DVNLRSYFGSIRPPTRL FGF LGRCI+LHFPK TF HF
Sbjct: 14  KNRSSDSSRFSEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHF 73

Query: 74  FLPRRLRRLKRRVKSKPGKDQGRWWAF-GKVGPIGCLHSSDDTEEERNKVRGREAEKRVE 133
           FLPRR RRLKRR K++PGK++GRWW   GK GPIGCL   DDTEEERN+VRGR A KRVE
Sbjct: 74  FLPRRPRRLKRREKTRPGKEKGRWWTTPGKAGPIGCLR--DDTEEERNEVRGRGARKRVE 133

Query: 134 S----------------------------------------ISGAFKHPKYVGVVNDIAF 193
           S                                        ISGAFKHPKY GVVNDIAF
Sbjct: 134 SIRLDDRKKQNEIRGWPKKKQRYGYHDRTPSIKKNLSKSLRISGAFKHPKYGGVVNDIAF 193

Query: 194 LIENDDSFRKTKLFKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHF 237
           LIENDDSFRKTKLFKFFFP +SR D PTS+L  RTLPAV PSLN+ VMQY  NTK +M+F
Sbjct: 194 LIENDDSFRKTKLFKFFFPKKSRSDGPTSYL--RTLPAVGPSLNFLVMQYFFNTKNQMNF 253

[Close]

BLAST of CmaCh12G007600 vs. ExPASy TrEMBL
Match: D5I3F1 (Ribosomal protein S3 OS=Cucurbita pepo OX=3663 GN=rps3 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.3e-98
Identity = 188/244 (77.05%), Postives = 191/244 (78.28%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPKITF HFFLPRR R LKRR KSKPGKDQ
Sbjct: 35  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQ 94

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVES--------------------- 154
           GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVES                     
Sbjct: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQ 154

Query: 155 --------------------ISGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQ 214
                               +SGAFKHPKY GVVNDIAFLIENDDSFRKT+LFKFFFPNQ
Sbjct: 155 DYGYHDRSPSRKKNLSKLLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQ 214

Query: 215 SRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMG 238
           SR D PTSHLLKRTLPAVRPSLNY VMQYLLNTK KMHFDPV VLNHFVAPGVA+PSTMG
Sbjct: 215 SRSDGPTSHLLKRTLPAVRPSLNYLVMQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMG 274

[Close]

BLAST of CmaCh12G007600 vs. ExPASy TrEMBL
Match: D5I3A1 (Ribosomal protein S3 OS=Citrullus lanatus OX=3654 GN=rps3 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.2e-97
Identity = 186/243 (76.54%), Postives = 191/243 (78.60%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKRR KSKPGK++
Sbjct: 35  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEK 94

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI-------------------- 154
           GRWWAFGKVGPIGCLHSSDDTEEERN+VRGREAEKRVESI                    
Sbjct: 95  GRWWAFGKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQR 154

Query: 155 --------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQS 214
                               SGAFKHPKY GVVNDIAFLIENDDSFRKTKLFKFFFP +S
Sbjct: 155 YGYHDRSPSIKKNLSKLLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKS 214

Query: 215 RFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGG 238
           R D PTSHLLKRTLPAVRPSLNY VMQYLLNTK KMHFDPVVVLNHFVAPGVA+PSTMGG
Sbjct: 215 RSDGPTSHLLKRTLPAVRPSLNYLVMQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGG 274

[Close]

BLAST of CmaCh12G007600 vs. ExPASy TrEMBL
Match: A0A7D6C3M1 (Ribosomal protein S3 OS=Luffa acutangula OX=56866 GN=rps3 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 187/266 (70.30%), Postives = 197/266 (74.06%), Query Frame = 0


Query: 12  IEKKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFN 71
           ++  +    S  S Y   +    DVNLRSYFGSIRPPTRL FGF LGRCIIL+FPK TF 
Sbjct: 12  LDLNRSSDSSRFSDYYYGKSLYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILNFPKRTFI 71

Query: 72  HFFLPRRLRRLKRRVKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRV 131
           HFFLPRR RRLKRR KSKPGK++GRWWAFGKVGPIGCLH  DDTEEERN+VRGREAEKRV
Sbjct: 72  HFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH--DDTEEERNEVRGREAEKRV 131

Query: 132 ESI----------------------------------------SGAFKHPKYVGVVNDIA 191
           ESI                                        SGAFKHPKY GVVNDIA
Sbjct: 132 ESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGVVNDIA 191

Query: 192 FLIENDDSFRKTKLFKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMH 238
           FLIENDDSFRKTKLFKFFFP +SR D PTSHLLKRTLPAVRPSLNYSVMQYLLNTK KMH
Sbjct: 192 FLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKMH 251

[Close]

BLAST of CmaCh12G007600 vs. ExPASy TrEMBL
Match: A0A443Q4V7 (Cytochrome c biogenesis FN mitochondrion OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02756300 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93
Identity = 182/251 (72.51%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 26  YGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRR 85
           Y  ++    DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKRR
Sbjct: 28  YPARKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRR 87

Query: 86  VKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI----------- 145
            KS+PGK++GRWWAFGKVGPIGCLHSSD TEEERN+VRGR A KRVESI           
Sbjct: 88  DKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQNEI 147

Query: 146 -----------------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKL 205
                                        SGAFKHPKY GVVNDIAFLIENDDSFRKTKL
Sbjct: 148 RIWPKKKQCYGYHDRSPSRKKNPSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTKL 207

Query: 206 FKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPG 237
           FKFFFP +SR D PTSHLLKRTLPAVRPSLNYSVMQYLLNTK KMHFDPVVVLNHFVAPG
Sbjct: 208 FKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKMHFDPVVVLNHFVAPG 267

[Close]

BLAST of CmaCh12G007600 vs. ExPASy TrEMBL
Match: A0A5J6NGQ6 (Ribosomal protein S3 OS=Cercis canadensis OX=49801 GN=rps3 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.2e-93
Identity = 178/242 (73.55%), Postives = 188/242 (77.69%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCII+HFPK TF HFFLPRR RRLKRR KS+PGK++
Sbjct: 35  DVNLRSYFGSIRPPTRLTFGFRLGRCIIIHFPKRTFIHFFLPRRPRRLKRREKSRPGKEK 94

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI-------------------- 154
           GRWWAFGKVGPIGCLHSSD+TEEERN+VRGR A KRVESI                    
Sbjct: 95  GRWWAFGKVGPIGCLHSSDNTEEERNEVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQR 154

Query: 155 --------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQS 214
                               SGAFKHPKY GVVNDIAFLIENDDSFRKTKLFKFFFP +S
Sbjct: 155 YGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKS 214

Query: 215 RFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGG 237
           R D PTSHL KRTLPAVRPSLNYSVMQYLLNTK ++HFDPVVVLNHFVAPGVA+PSTMGG
Sbjct: 215 RSDGPTSHLFKRTLPAVRPSLNYSVMQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGG 274

[Close]

BLAST of CmaCh12G007600 vs. NCBI nr
Match: YP_003587365.1 (ribosomal protein S3 [Cucurbita pepo] >ACV96695.1 ribosomal protein S3 [Cucurbita pepo])

HSP 1 Score: 367.9 bits (943), Expect = 6.8e-98
Identity = 188/244 (77.05%), Postives = 191/244 (78.28%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPKITF HFFLPRR R LKRR KSKPGKDQ
Sbjct: 35  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQ 94

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVES--------------------- 154
           GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVES                     
Sbjct: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQ 154

Query: 155 --------------------ISGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQ 214
                               +SGAFKHPKY GVVNDIAFLIENDDSFRKT+LFKFFFPNQ
Sbjct: 155 DYGYHDRSPSRKKNLSKLLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQ 214

Query: 215 SRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMG 238
           SR D PTSHLLKRTLPAVRPSLNY VMQYLLNTK KMHFDPV VLNHFVAPGVA+PSTMG
Sbjct: 215 SRSDGPTSHLLKRTLPAVRPSLNYLVMQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMG 274

[Close]

BLAST of CmaCh12G007600 vs. NCBI nr
Match: YP_003587231.1 (ribosomal protein S3 [Citrullus lanatus] >ACV96652.1 ribosomal protein S3 [Citrullus lanatus])

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-96
Identity = 186/243 (76.54%), Postives = 191/243 (78.60%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKRR KSKPGK++
Sbjct: 35  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEK 94

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI-------------------- 154
           GRWWAFGKVGPIGCLHSSDDTEEERN+VRGREAEKRVESI                    
Sbjct: 95  GRWWAFGKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQR 154

Query: 155 --------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQS 214
                               SGAFKHPKY GVVNDIAFLIENDDSFRKTKLFKFFFP +S
Sbjct: 155 YGYHDRSPSIKKNLSKLLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKS 214

Query: 215 RFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGG 238
           R D PTSHLLKRTLPAVRPSLNY VMQYLLNTK KMHFDPVVVLNHFVAPGVA+PSTMGG
Sbjct: 215 RSDGPTSHLLKRTLPAVRPSLNYLVMQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGG 274

[Close]

BLAST of CmaCh12G007600 vs. NCBI nr
Match: YP_009913654.1 (ribosomal protein S3 [Luffa acutangula] >QLJ93023.1 ribosomal protein S3 [Luffa acutangula])

HSP 1 Score: 352.8 bits (904), Expect = 2.3e-93
Identity = 187/266 (70.30%), Postives = 197/266 (74.06%), Query Frame = 0


Query: 12  IEKKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFN 71
           ++  +    S  S Y   +    DVNLRSYFGSIRPPTRL FGF LGRCIIL+FPK TF 
Sbjct: 12  LDLNRSSDSSRFSDYYYGKSLYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILNFPKRTFI 71

Query: 72  HFFLPRRLRRLKRRVKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRV 131
           HFFLPRR RRLKRR KSKPGK++GRWWAFGKVGPIGCLH  DDTEEERN+VRGREAEKRV
Sbjct: 72  HFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH--DDTEEERNEVRGREAEKRV 131

Query: 132 ESI----------------------------------------SGAFKHPKYVGVVNDIA 191
           ESI                                        SGAFKHPKY GVVNDIA
Sbjct: 132 ESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGVVNDIA 191

Query: 192 FLIENDDSFRKTKLFKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMH 238
           FLIENDDSFRKTKLFKFFFP +SR D PTSHLLKRTLPAVRPSLNYSVMQYLLNTK KMH
Sbjct: 192 FLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKMH 251

[Close]

BLAST of CmaCh12G007600 vs. NCBI nr
Match: RWR98071.1 (cytochrome c biogenesis FN mitochondrion [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 351.3 bits (900), Expect = 6.6e-93
Identity = 182/251 (72.51%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 26  YGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRR 85
           Y  ++    DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKRR
Sbjct: 28  YPARKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRR 87

Query: 86  VKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI----------- 145
            KS+PGK++GRWWAFGKVGPIGCLHSSD TEEERN+VRGR A KRVESI           
Sbjct: 88  DKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQNEI 147

Query: 146 -----------------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKL 205
                                        SGAFKHPKY GVVNDIAFLIENDDSFRKTKL
Sbjct: 148 RIWPKKKQCYGYHDRSPSRKKNPSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSFRKTKL 207

Query: 206 FKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPG 237
           FKFFFP +SR D PTSHLLKRTLPAVRPSLNYSVMQYLLNTK KMHFDPVVVLNHFVAPG
Sbjct: 208 FKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKMHFDPVVVLNHFVAPG 267

[Close]

BLAST of CmaCh12G007600 vs. NCBI nr
Match: KAF8364943.1 (hypothetical protein HHK36_033022 [Tetracentron sinense] >KAF8376877.1 hypothetical protein HHK36_031382 [Tetracentron sinense])

HSP 1 Score: 351.3 bits (900), Expect = 6.6e-93
Identity = 181/242 (74.79%), Postives = 187/242 (77.27%), Query Frame = 0


Query: 35  DVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHFFLPRRLRRLKRRVKSKPGKDQ 94
           DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HFFLPRR RRLKRR KS+PGK++
Sbjct: 33  DVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRRDKSRPGKEK 92

Query: 95  GRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVESI-------------------- 154
           GRWWAFGKVGPIGCLHSSD TEEERN+VRGR A KRVESI                    
Sbjct: 93  GRWWAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQR 152

Query: 155 --------------------SGAFKHPKYVGVVNDIAFLIENDDSFRKTKLFKFFFPNQS 214
                               SGAFKHPKY GVVNDIAFLIENDDS RKTKLFKFFFP +S
Sbjct: 153 YGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSSRKTKLFKFFFPKKS 212

Query: 215 RFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVVVLNHFVAPGVAKPSTMGG 237
           R D PTSHLLKRTLPAVRPSLNYSVMQYLLNTK KMHFDPVVVLNHFVAPGVA+PSTMGG
Sbjct: 213 RSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGG 272

[Close]

BLAST of CmaCh12G007600 vs. TAIR 10
Match: ATMG00090.1 (structural constituent of ribosome;protein binding )

HSP 1 Score: 312.0 bits (798), Expect = 4.1e-85
Identity = 169/264 (64.02%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 14  KKKKGRKSSLSAYGTKRKSNFDVNLRSYFGSIRPPTRLPFGFHLGRCIILHFPKITFNHF 73
           K +    S  S Y   +    DVNLRSYFGSIRPPTRL FGF LGRCIILHFPK TF HF
Sbjct: 14  KNRSSDSSRFSEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 73

Query: 74  FLPRRLRRLKRRVKSKPGKDQGRWW-AFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVE 133
           FLPRR RRLKRR K++PGK++GRWW  FGK GPI CLHSSDDTEEERN+VRGR A KRVE
Sbjct: 74  FLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEERNEVRGRGARKRVE 133

Query: 134 S----------------------------------------ISGAFKHPKYVGVVNDIAF 193
           S                                        ISGAFKHPKY GVVNDIAF
Sbjct: 134 SIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKSLRISGAFKHPKYAGVVNDIAF 193

Query: 194 LIENDDSFRKTKLFKFFFPNQSRFDVPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHF 237
           LIENDDSF+KTKLFK FF N+SR D PTS+L  RTLPAVRPSLN+ VMQY  NTK +++F
Sbjct: 194 LIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFLVMQYFFNTKNQINF 253

The following BLAST results are available for this feature:

BLAST of CmaCh12G007600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04716	2.0e-92	72.73	Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=...	[more]
P27754	7.6e-92	71.49	Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3...	[more]
P27928	8.4e-91	68.32	Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1	[more]
Q95749	9.9e-84	64.02	Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS3 PE=1...	[more]
P49386	6.0e-81	63.26	Ribosomal protein S3, mitochondrial OS=Brassica napus OX=3708 GN=RPS3 PE=3 SV=1	[more]

BLAST of CmaCh12G007600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D5I3F1	3.3e-98	77.05	Ribosomal protein S3 OS=Cucurbita pepo OX=3663 GN=rps3 PE=3 SV=1	[more]
D5I3A1	6.2e-97	76.54	Ribosomal protein S3 OS=Citrullus lanatus OX=3654 GN=rps3 PE=3 SV=1	[more]
A0A7D6C3M1	1.1e-93	70.30	Ribosomal protein S3 OS=Luffa acutangula OX=56866 GN=rps3 PE=3 SV=1	[more]
A0A443Q4V7	3.2e-93	72.51	Cytochrome c biogenesis FN mitochondrion OS=Cinnamomum micranthum f. kanehirae O...	[more]
A0A5J6NGQ6	4.2e-93	73.55	Ribosomal protein S3 OS=Cercis canadensis OX=49801 GN=rps3 PE=3 SV=1	[more]

BLAST of CmaCh12G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_003587365.1	6.8e-98	77.05	ribosomal protein S3 [Cucurbita pepo] >ACV96695.1 ribosomal protein S3 [Cucurbit...	[more]
YP_003587231.1	1.3e-96	76.54	ribosomal protein S3 [Citrullus lanatus] >ACV96652.1 ribosomal protein S3 [Citru...	[more]
YP_009913654.1	2.3e-93	70.30	ribosomal protein S3 [Luffa acutangula] >QLJ93023.1 ribosomal protein S3 [Luffa ...	[more]
RWR98071.1	6.6e-93	72.51	cytochrome c biogenesis FN mitochondrion [Cinnamomum micranthum f. kanehirae]	[more]
KAF8364943.1	6.6e-93	74.79	hypothetical protein HHK36_033022 [Tetracentron sinense] >KAF8376877.1 hypotheti...	[more]

BLAST of CmaCh12G007600 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00090.1	4.1e-85	64.02	structural constituent of ribosome;protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044954	Ribosomal protein S3, mitochondrial, plant	PANTHER	PTHR35928	RIBOSOMAL PROTEIN S3, MITOCHONDRIAL	coord: 17..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G007600.1	CmaCh12G007600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome