CmaCh12G007320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Location	Cma_Chr12: 4438871 .. 4444500 (-)
RNA-Seq Expression	CmaCh12G007320
Synteny	CmaCh12G007320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCCGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCCCATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTAAAATTCTCGGAAAACGCCAACGATTACTTTCTTATTTATCAAAGATAAATAAAATGCGTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAATTTTAAAAGTAATTTTTAATTATTTGATTTATTAGATCTTGAATTTTTATGAACTTATTTGCATTTTCAGCAATTCATGGAAAGCTGAATCGAGGAAAAACTTATGAATGGACCAGCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACTGTAAATGGTCCAGAACTGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAATTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGCGCACAGACTCCCTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGGGGAGTCGCGGCTGATCTACCGGGTTTGGTTGGGTTAACAATCCAACTAGAAGAATTTTTAGAATACTTATGGATTTCGAGAAAAATAATATTAAAATATTCGAAAAATGAAAAATTACAAAAATACCCCTTAAAATATGAATAATTACGAAAAATGTCATTCTGCTCAAAATCACGACTTCAACCGCCACCTCCTGCACAATCCATCAAATCTCAAAATCCGGCCATTGGATCTTCTCCAAAATTAGAGACAAGTTAAAATGTTTGTAAATCACTACATCCAAATTCAAATTGGAAGTTGTTAGCTCGCTTATCGAACAAGATATTTCTGAAGGATTATCCAAAAAAATTTAATCTCCAAATCTCGATGATAATGGAGGTTTCATCGTCGGTATAAGCTTCCCCTATAAATTTTGAAGTTGGGACAATAGCATAGAACAAGAATCGAATGCTGCAATAAGTGTTTAAATTTTGTGCTTCTACTCTCGAATTTCTTTTAAACTCGAGAGCAATTCTCCACCATTTCTCTTTAAACTTGTTCCAACAATTTCTAAACAAGATTACGCACAAGTTTTGGGAAGAAATCGAGTGCTGAAAGTGCCTATAAACCATTCCCCCCCAATCCAATATGCATTCGAAGAGCTTCAAGGAAAACTCGAAAATCCAATCCGAGGATATACGATAATTGGCCGAGCAAGAAAAATCTCAATCAGTTTCTGCACCTCAAGAACGTGCCTAATTGAAGGAAATTCGTTTCACGTAAAATTTAGGGGTAAGTATCAAATTCTTATATACCGTCCCTTTAACCATTTAAAATAATAATAATAAATTAATTAAAATTAAAAAAAAAAAAACAACTTTTTCCCACAATTATCTCTCATCAACCCCGGTAACAACAAAAAGAAAAAGAAAAACAAGTGAGATTTATTTGAGAAAAAAAAAAAAGAATGATCTTTAATCAATTGAGATTCAGCTAAAGATTTCCTTAAAGATAGATCTGATTATATATTAAATCTCATTTCCTTTTATCTTATTTATAGAAATCACAACCAATTAGATCTTCATTTAATTATTACAATGGTCTAGATTTGACTTAGAAACTAAATGTCAATCATTTATACAATTCTAGTAAATCACTCCAAATTAGTAATATTAGATCAAATTTTTATCAGTAGCCAAATGAATAGATAAAGATAGAATGCCAAAAAAAACTTCGGGAGACACTGAGATAAGGAAAGATTTGGAAACAGAGACGGAGATACACAGATCCACCTGAAATTTGGAATATATAAGAACAAAATTAAAAGTATAAAAAAAGAAAGAATTAGGGATAACAAAATTAAAAATTTAACCGATAAAAAAAAAAAAAAAGAAGATTAGGGAATTAAAAGCTGAGAAAAGCNAATGAAAAGACTGATAAAAAAAAAGAATTAAAAGGCCACCGATAAAAAAAAGAATTAAAAGACAACCAATAAAAAAAGAATTAAAAGGCAACAGATAAAAAATAAAATTAGGAAATTAAAAACCACACACTAAATAAGAGAAAGTAAATAGAGGGTAAATATAGAGTAGTATAACTTAAAGAGACCTAACATAACGTTCTATGTTTTTAACATATAACATTTCATCATATACACATCATACCATGACATATTGCATCACAATATAACATATCATAAACAAGTCATAACGTAAACACTTCGTAGTCATATTATTCTCTAACTTATCATAGCCTTAACGTTCTCATACCTATCATAGACATATCATCACGTGAACGTACCTTAGTCATATCATCACAAGAACTTAACCTAACACTATTGTTCTATCAATCCTAACGCTATCGTTCTATCAATCTATCACAAACCTATTCCTTTATACCCGTAACCTAACCATATTCTTCCATCAATCTCTCTTATCCATATCACTCTGGTATGTAACCTAACCTTAACGTTTCATGAACGTATTTTACTCCTATCATTACATCTCGTTTTGTGCATTCTTCTTGTATCCTATCTCAAACATATCCTTGAACACATCGTACAGTAATTATTATCATACAATTCACATATCATAACGTATACATAACATATAGGAAGCATATTGATCCACAGACAATTCACACATATTGATAACATAAGGAACCACTACAAGGGGAGTAAGATTCGGATTACCTTGTAATCTCAAGGCAAAAACATTGTTTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGACCAAATATCTCAAGGCAACAACACTTGCTTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACATGCAACCTAAACTACATAAAATTGCAAAGAAACTTAGTCATTGGCTAAAGAAGAGCACAAATGATTCTTGTACTATATTTTCCAAGTCTACTTACAAATACAACATAGATGGCTTTATATAGCCTCAAAATGAAGCTACTAAATGCATTCCAAGAGTTAGTAACATTCATATTTAATGGTCTTAATTAACCATTATGTAATTGTAACTTAAATAAATTAAAAGTCTTAAAATACATTAATGATATACAATAGCTCTAAATTACTCTAAATTGTAGTCCACCCAAAATTCAAAACATGAAACTTCATTTTTCTTCACATCTTCTTTGAAGCATATTGTATGATTGATGTCTCTTGGTTCATATCACATATCAATATATATGACACGTGCAGAACCACAGGGCATGTGTTAACATCAAATATAACCATGCCTATAGTAAAGTCACTTACCTGGCTAGCTTAAGTCGTTGTCACGAATACATCTTTAATGAAAGTTCGATTCCATCCTTTGAAAACCAAGTCAACCTATATAAGCCCATGACATTAGTTTCAGGTTTGAACTCTACCATATTATTTCTCTACTTTATTGGTACTTTATTGGTCCATTGTTAAAAGTCTTGAAATGTTATATATATATATATATATAAAATTATATTTTTATTAAAAATCTTATTTTTCATGGTTTGTGTTGTATAAGAAAGTAGACATAGCTATTTCAAGTTATTCTCGGCTTTACTAGTCTGTATTTACCTTTCCCTCTCTATTTAGTTTGCGGTTTTTAATTCCCTAGTCTTTTTTTTATCTGTTGCCTTTTAATTCTGTTCTCATGTATTCCAAATTTCTAGTGTATCCTATAGAAGTTTTCTTGTCATTCAATCCTTAATCTATTCATTTGACTACCAATAAAAATTTAATCCATTTCCAAATCTTTCCTTATCTCACTGTTTCCTATACATAAGTTTTCTTGGTCATTCTATCCTTAATCTATTCATTTGGCTACCAATAAAAATTTAATCTAATATTACTAATCTAACGTGATTTACTAGAATCGTATAAATGATTGATAATTAGTTTCTAACTCAAAACTAGACCATTGTAATAATTCAATGAAGATTTTACTATAATTGGTTGTGATTTCTAAAAAAGATAAAAGAAAATGAAGATTTAATATATATTGATAAGATCTCTTAACTGGGTAAGGGCGATTATTTTTTTTTTTTCCTCTAAGTAAATCTGACCATTATTGTTTTTCTTTTTCTTTTTGGAGTAACTGCTCATTTTCTAGCATAGGATGGGCTGAGTAAGGTAATTGTGGGAAGGATTAGAGGTTAGTGGAGAGAAGTTGAGAAATGTTTTTTTTTTTAATTTTTTAATTGTAATTAATTAATTAATTTATTATTATTATTATTTTAACTTTTTTTTTTTTTAATTTCTTTATTTATTTTTGGGCTATTACATTATATACCTCTCAAAGAAACTTTTGTACTCGAAAGTGTTTTAATCTTGGAATAACTCGGGTCGTTATTCTAAGAGTTCTTTGTCAAGTCTTCAAGTACCACTAAGTAAAAATTCTTAACAAGTATACCCTAATTCATATGAGTCATAAACATTTATTTGCATGCATAAAACTTTCATAAGCCTATCACTTTGTATTCCTAAAATCTTTGATTCCTTATAAGGTGTCTTCTCATATAGTTAGTATTTTAAATCTTAACTCATACTCCAAAAGAGTCTTTTTGGTCATTTACCCCCAAATCTTGGTTTAATTCTTCAACATATTCCAATGGCCTTGTAATTTTGTGTAATCCCTTTACACCGTGACATAAGACTCCTCATCAAATTTCATGTCAATTAGAGGTCACTTTGGTCATAAACTAGTGGTACGTAATTATAGGGGCATTTAGTCATTTTACACCTACACTTGGTTTAGCCCGTTATCATAACCTAATGGTCACCAAATTTTATACATAACCTTATCATGCCATATTGAATATTTTTCTAAAATTTCATGGACAACATAATTCATCTAAAGTTTGTGGCTCAGACACTTCATTGAAATAAATGTTGTACAATAAGGTTGGAAAACTCACATAGTTCCTCACTTTTTTTTTTTTTTTTTAAGTTTTATTTTTATTTTTTATACTATGATTCCATCTACTAGATCAATAGTTTTACTAGTATCTGATTTACATTATTCTCCAAATCAAATTCTCTACACTTAGCTAAAGGTTCACTAGATCTGTTTGTCCATACATCCTCAAAATCTCATTTTAAAATACGGGATCTCCACCTACACAAGAAAATTGTTGATAAAACTCCAAAATTGCACTTTCTTTTTTATCTAATTTTTTTTTCTCTCCTTATCATTAAAGAAAGACAGAAAAATTTCAGGGTAGAAACCTTCTCAAGAATTTCTCTTAAAATTTGA

mRNA sequence

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCCGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCCCATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACTGTAAATGGTCCAGAACTGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAATTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGCGCACAGACTCCCTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGAAAGACAGAAAAATTTCAGGGTAGAAACCTTCTCAAGAATTTCTCTTAAAATTTGA

Coding sequence (CDS)

ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCCGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCCCATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACTGTAAATGGTCCAGAACTGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAATTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGCGCACAGACTCCCTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGAAAGACAGAAAAATTTCAGGGTAGAAACCTTCTCAAGAATTTCTCTTAAAATTTGA

Protein sequence

MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLPTRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATERQKNFRVETFSRISLKI

Homology

[Close]

BLAST of CmaCh12G007320 vs. ExPASy Swiss-Prot
Match: Q4VZL2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 52  GLPTRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ 111
           G  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ
Sbjct: 3   GPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ 62

Query: 112 YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM 171
           YLPYVTRWDYLATMFTEAITVNGPE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM
Sbjct: 63  YLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM 122

Query: 172 ADIGAQTPFFYIFRERELVYDLFEAAT 199
           ADIGAQTPFFYIFRERELVYDLFEAAT
Sbjct: 123 ADIGAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. ExPASy Swiss-Prot
Match: Q49KU2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhH PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-79
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 55  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP 114
           TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLP
Sbjct: 6   TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLP 65

Query: 115 YVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 174
           YVTRWDYLATMFTEAITVNGPE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI
Sbjct: 66  YVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 125

Query: 175 GAQTPFFYIFRERELVYDLFEAAT 199
           GAQTPFFYIFRERELVYDLFEAAT
Sbjct: 126 GAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. ExPASy Swiss-Prot
Match: B1NWK5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Manihot esculenta OX=3983 GN=ndhH PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-79
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 55  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP 114
           TRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP
Sbjct: 6   TRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP 65

Query: 115 YVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 174
           YVTRWDYLATMFTEAITVNGPELLGNIQVPKRA YIRVIMLELSRIASHLLWLGPFMADI
Sbjct: 66  YVTRWDYLATMFTEAITVNGPELLGNIQVPKRAGYIRVIMLELSRIASHLLWLGPFMADI 125

Query: 175 GAQTPFFYIFRERELVYDLFEAAT 199
           GAQTPFFYIFRERELVYDLFEAAT
Sbjct: 126 GAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. ExPASy Swiss-Prot
Match: B0Z4T1 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhH PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.7e-79
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 55  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP 114
           TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLP
Sbjct: 6   TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLP 65

Query: 115 YVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 174
           YVTRWDYLATMFTEAIT+NGPE LGNIQVPKRASYIR+IMLELSRIASHLLWLGPFMADI
Sbjct: 66  YVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRIIMLELSRIASHLLWLGPFMADI 125

Query: 175 GAQTPFFYIFRERELVYDLFEAAT 199
           GAQTPFFYIFRERELVYDLFEAAT
Sbjct: 126 GAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. ExPASy Swiss-Prot
Match: B0Z515 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhH PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.7e-79
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 55  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP 114
           TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLP
Sbjct: 6   TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLP 65

Query: 115 YVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 174
           YVTRWDYLATMFTEAIT+NGPE LGNIQVPKRASYIR+IMLELSRIASHLLWLGPFMADI
Sbjct: 66  YVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRIIMLELSRIASHLLWLGPFMADI 125

Query: 175 GAQTPFFYIFRERELVYDLFEAAT 199
           GAQTPFFYIFRERELVYDLFEAAT
Sbjct: 126 GAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. ExPASy TrEMBL
Match: A0A251TVX7 (Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0258481 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.0e-95
Identity = 188/242 (77.69%), Postives = 191/242 (78.93%), Query Frame = 0


Query: 1   MVKNSFSSVI--SQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL----- 60
           MVKNSF S+I   QEE KEN GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL     
Sbjct: 1   MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILG 60

Query: 61  -------------------------------------PTRKDLMIVNMGPHHPSMHGVLR 120
                                                 TRKDLMIVNMGPHHPSMHGVLR
Sbjct: 61  KRQRLLAYLSKKIDLMNFFSLSAIHARMNREKPMTVPSTRKDLMIVNMGPHHPSMHGVLR 120

Query: 121 LILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPE 180
           LI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE
Sbjct: 121 LIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPE 180

Query: 181 LLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEA 199
            LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEA
Sbjct: 181 QLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEA 240

[Close]

BLAST of CmaCh12G007320 vs. ExPASy TrEMBL
Match: A0A1Y3BZ29 (Multifunctional fusion protein OS=Helianthus annuus OX=4232 GN=nuoI PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 188/251 (74.90%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MVKNSFSSVI--SQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL----- 60
           MVKNSF S+I   QEE KEN GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL     
Sbjct: 1   MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILG 60

Query: 61  ----------------------------------------------PTRKDLMIVNMGPH 120
                                                          TRKDLMIVNMGPH
Sbjct: 61  KRQRLLAYLSKKNRVRYKELIGQLDIRERKTPIHARMNREKPMTVPSTRKDLMIVNMGPH 120

Query: 121 HPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180
           HPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT
Sbjct: 121 HPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180

Query: 181 EAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 199
           EAITVN PE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER
Sbjct: 181 EAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 240

[Close]

BLAST of CmaCh12G007320 vs. ExPASy TrEMBL
Match: A0A1Y3BXI5 (Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr00c0336g0573701 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 188/251 (74.90%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MVKNSFSSVI--SQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL----- 60
           MVKNSF S+I   QEE KEN GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL     
Sbjct: 1   MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILG 60

Query: 61  ----------------------------------------------PTRKDLMIVNMGPH 120
                                                          TRKDLMIVNMGPH
Sbjct: 61  KRQRLLAYLSKKNRVRYKELIGQLDIRERKTPIHARMNREKPMTVPSTRKDLMIVNMGPH 120

Query: 121 HPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180
           HPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT
Sbjct: 121 HPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180

Query: 181 EAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 199
           EAITVN PE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER
Sbjct: 181 EAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 240

[Close]

BLAST of CmaCh12G007320 vs. ExPASy TrEMBL
Match: A0A251VJ91 (Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0059741 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 188/251 (74.90%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MVKNSFSSVI--SQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL----- 60
           MVKNSF S+I   QEE KEN GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL     
Sbjct: 1   MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILG 60

Query: 61  ----------------------------------------------PTRKDLMIVNMGPH 120
                                                          TRKDLMIVNMGPH
Sbjct: 61  KRQRLLAYLSKKNRVRYKELIGQLDIRERKTPIHARMNREKPMTVPSTRKDLMIVNMGPH 120

Query: 121 HPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180
           HPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT
Sbjct: 121 HPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180

Query: 181 EAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 199
           EAITVN PE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER
Sbjct: 181 EAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 240

[Close]

BLAST of CmaCh12G007320 vs. ExPASy TrEMBL
Match: A0A251S5E3 (Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0465471 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.5e-92
Identity = 184/223 (82.51%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 1   MVKNSFSSVI--SQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKD-YLSQ------- 60
           MVKNSF S+I   QEE KEN GSVEFQVVSFTNKIRRLTSHLELHKK  YL +       
Sbjct: 1   MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKTIYLREVCGKFWE 60

Query: 61  ----------RGLP-----TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGY 120
                     R  P     TRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGY
Sbjct: 61  NVNAIHARMNREKPMTVPSTRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGY 120

Query: 121 LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIML 180
           LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE LGNIQVPKRASYIRVIML
Sbjct: 121 LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGNIQVPKRASYIRVIML 180

Query: 181 ELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAAT 199
           ELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAAT
Sbjct: 181 ELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAAT 223

[Close]

BLAST of CmaCh12G007320 vs. NCBI nr
Match: OTF84513.1 (putative ribosomal protein S15 [Helianthus annuus])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 188/251 (74.90%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MVKNSFSSVI--SQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL----- 60
           MVKNSF S+I   QEE KEN GSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL     
Sbjct: 1   MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILG 60

Query: 61  ----------------------------------------------PTRKDLMIVNMGPH 120
                                                          TRKDLMIVNMGPH
Sbjct: 61  KRQRLLAYLSKKNRVRYKELIGQLDIRERKTPIHARMNREKPMTVPSTRKDLMIVNMGPH 120

Query: 121 HPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180
           HPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT
Sbjct: 121 HPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFT 180

Query: 181 EAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 199
           EAITVN PE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER
Sbjct: 181 EAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRER 240

[Close]

BLAST of CmaCh12G007320 vs. NCBI nr
Match: EMS59732.1 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Triticum urartu])

HSP 1 Score: 335.5 bits (859), Expect = 3.4e-88
Identity = 171/223 (76.68%), Postives = 180/223 (80.72%), Query Frame = 0


Query: 12  QEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLP----------------- 71
           +EEK+EN GSVEFQV SFTNKIRRL SHLELHKKD+ S+RGL                  
Sbjct: 56  KEEKEENRGSVEFQVFSFTNKIRRLASHLELHKKDFSSERGLRRLLGKRRRLLAYLAKKN 115

Query: 72  -----------------TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLH 131
                            TRKDLMIVNMGP HPSMHGVLRLI+TLDGEDVIDCEPILGYLH
Sbjct: 116 RVRYKKLIGRKDMSLPLTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLH 175

Query: 132 RGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLEL 191
           RGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PE L NIQ+P+RASYIRVIMLEL
Sbjct: 176 RGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLEL 235

Query: 192 SRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATER 201
           SRIASHLLWLGPFMAD+GAQTPFFYIFREREL+YDLFEAATER
Sbjct: 236 SRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATER 278

[Close]

BLAST of CmaCh12G007320 vs. NCBI nr
Match: KAF4400814.1 (hypothetical protein G4B88_004357 [Cannabis sativa])

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-77
Identity = 158/228 (69.30%), Postives = 170/228 (74.56%), Query Frame = 0


Query: 14  EKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLP------------TRKDLMI 73
           +K+EN GSV FQ++S TN+IR+L+SHLELH+KDYLSQR L               K   I
Sbjct: 340 KKEENKGSVVFQILSLTNRIRKLSSHLELHRKDYLSQRCLRKILGKCQRMLSYLSKKNRI 399

Query: 74  VNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDY 133
           +NMGP HPSMHGVLRLI+TLDGEDVIDCEPILGY HRGMEKIAEN+TIIQYLPYVTRWDY
Sbjct: 400 LNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYSHRGMEKIAENQTIIQYLPYVTRWDY 459

Query: 134 LATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFF 193
           LATMFTEAITVNGP+LLGNIQVPKRASYIR IMLELSRIASHLLWLGPFM DIGAQTPFF
Sbjct: 460 LATMFTEAITVNGPKLLGNIQVPKRASYIRAIMLELSRIASHLLWLGPFMTDIGAQTPFF 519

Query: 194 YIFREREL-------------------------------VYDLFEAAT 199
           YIFRER L                               VYDLFEAAT
Sbjct: 520 YIFRERVLSIRFWVDNHVLIRPIHIESLPSSTHYRRMLEVYDLFEAAT 567

[Close]

BLAST of CmaCh12G007320 vs. NCBI nr
Match: ALO22118.1 (NdhH [Cucurbita ficifolia] >ALO22210.1 NdhH [Cucurbita foetidissima] >ALO22865.1 NdhH [Cucurbita pedatifolia] >QWV60897.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucurbita ficifolia] >QZL38826.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucurbita ficifolia])

HSP 1 Score: 299.3 bits (765), Expect = 2.7e-77
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 52  GLPTRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ 111
           G  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ
Sbjct: 3   GPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ 62

Query: 112 YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM 171
           YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM
Sbjct: 63  YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM 122

Query: 172 ADIGAQTPFFYIFRERELVYDLFEAAT 199
           ADIGAQTPFFYIFRERELVYDLFEAAT
Sbjct: 123 ADIGAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. NCBI nr
Match: ALO21902.1 (NdhH [Cucurbita cordata] >ALO21965.1 NdhH [Cucurbita digitata])

HSP 1 Score: 299.3 bits (765), Expect = 2.7e-77
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 52  GLPTRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ 111
           G  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ
Sbjct: 3   GPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQ 62

Query: 112 YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM 171
           YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM
Sbjct: 63  YLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFM 122

Query: 172 ADIGAQTPFFYIFRERELVYDLFEAAT 199
           ADIGAQTPFFYIFRERELVYDLFEAAT
Sbjct: 123 ADIGAQTPFFYIFRERELVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 288.1 bits (736), Expect = 5.8e-78
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 55  TRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLP 114
           T KDLMIVNMGPHHPSMHGVLRLI+TLDGEDV+DCEPILGYLHRGMEKIAENR IIQYLP
Sbjct: 6   TGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLP 65

Query: 115 YVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 174
           YVTRWDYLATMFTEAITVNGPE LGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI
Sbjct: 66  YVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADI 125

Query: 175 GAQTPFFYIFRERELVYDLFEAAT 199
           GAQTPFFYIFRERE VYDLFEAAT
Sbjct: 126 GAQTPFFYIFREREFVYDLFEAAT 149

[Close]

BLAST of CmaCh12G007320 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 63  NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYL 122
           N GP HP+ HGV RL+L ++GE V   EP +G LHRG EK+ E +T +Q LPY  R DY+
Sbjct: 14  NFGPQHPAAHGVSRLVLEMNGEVVERAEPHIGSLHRGTEKLIEYKTYLQALPYSDRSDYV 73

Query: 123 ATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFY 182
           + M  E    +  E L N +VP RA YIRV+  E++RI++H L L     D+GA TPF +
Sbjct: 74  SMMAQEHAHSSAVEKLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGALTPFLW 133

Query: 183 IFRERELVYDLFE 196
            F ERE + + +E
Sbjct: 134 AFEEREKLLEFYE 146

[Close]

BLAST of CmaCh12G007320 vs. TAIR 10
Match: ATCG01120.1 (chloroplast ribosomal protein S15 )

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGL 54
          M+KN   S   +E+K+E+ GSVEFQV SFTNKIRRLTSHLELH+KDYLSQRGL
Sbjct: 1  MIKNIVISF--EEQKEESRGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGL 51

The following BLAST results are available for this feature:

BLAST of CmaCh12G007320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL2	1.8e-79	97.96	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q49KU2	5.1e-79	98.61	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus s...	[more]
B1NWK5	5.1e-79	98.61	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Manihot esculenta OX=...	[more]
B0Z4T1	8.7e-79	97.22	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola...	[more]
B0Z515	8.7e-79	97.22	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera biennis OX=...	[more]

BLAST of CmaCh12G007320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A251TVX7	9.0e-95	77.69	Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g025...	[more]
A0A1Y3BZ29	1.0e-93	74.90	Multifunctional fusion protein OS=Helianthus annuus OX=4232 GN=nuoI PE=3 SV=1	[more]
A0A1Y3BXI5	1.0e-93	74.90	Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr00c033...	[more]
A0A251VJ91	1.0e-93	74.90	Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g005...	[more]
A0A251S5E3	5.5e-92	82.51	Putative ribosomal protein S15 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g046...	[more]

BLAST of CmaCh12G007320 vs. NCBI nr


Match Name	E-value	Identity	Description
OTF84513.1	2.1e-93	74.90	putative ribosomal protein S15 [Helianthus annuus]	[more]
EMS59732.1	3.4e-88	76.68	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Triticum urartu]	[more]
KAF4400814.1	2.1e-77	69.30	hypothetical protein G4B88_004357 [Cannabis sativa]	[more]
ALO22118.1	2.7e-77	98.64	NdhH [Cucurbita ficifolia] >ALO22210.1 NdhH [Cucurbita foetidissima] >ALO22865.1...	[more]
ALO21902.1	2.7e-77	98.64	NdhH [Cucurbita cordata] >ALO21965.1 NdhH [Cucurbita digitata]	[more]

BLAST of CmaCh12G007320 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01110.1	5.8e-78	95.83	NAD(P)H dehydrogenase subunit H	[more]
ATMG00510.1	1.1e-28	46.62	NADH dehydrogenase subunit 7	[more]
ATCG01120.1	1.0e-13	73.58	chloroplast ribosomal protein S15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	SMART	SM01387	Ribosomal_S15_2	coord: 11..62 e-value: 5.8E-4 score: 6.4
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 14..53 e-value: 1.4E-9 score: 38.0
None	No IPR available	GENE3D	1.10.287.10		coord: 1..59 e-value: 1.3E-15 score: 59.2
None	No IPR available	PANTHER	PTHR11993:SF39	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT H, CHLOROPLASTIC	coord: 55..199
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 60..206 e-value: 1.8E-50 score: 173.8
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 69..198
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 55..199
IPR014029	NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site	PROSITE	PS00535	COMPLEX1_49K	coord: 96..107
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 15..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G007320.1	CmaCh12G007320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0006412	translation
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H