CmaCh12G007250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Reverse transcriptase
Location	Cma_Chr12: 4243239 .. 4243892 (+)
RNA-Seq Expression	CmaCh12G007250
Synteny	CmaCh12G007250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA

mRNA sequence

ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA

Coding sequence (CDS)

ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA

Protein sequence

MEGRTEGDSRERAHVLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRVRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQTLSPRRGIDHEIELIPTVKETTR

Homology

[Close]

BLAST of CmaCh12G007250 vs. ExPASy TrEMBL
Match: A0A6J1IEY4 (uncharacterized protein LOC111475733 OS=Cucurbita maxima OX=3661 GN=LOC111475733 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.7e-94
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATIN +P RSTLIDS ATHNFI DQEARRLGLTIG+DPGKMK +NSEALPIVGVSKRV
Sbjct: 470 VDATINFQPNRSTLIDSGATHNFIADQEARRLGLTIGRDPGKMKAINSEALPIVGVSKRV 529

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPL KCLVITDRNPTVIPASIKQ
Sbjct: 530 PFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQ 589

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL REEPTF+AIPLMEV TTEETVPNEI E LN YADIMPESLPQT
Sbjct: 590 PGNLRMISAIQLKRGLAREEPTFIAIPLMEVTTTEETVPNEINEVLNDYADIMPESLPQT 649

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEIELIP VK
Sbjct: 650 LPPRRGIDHEIELIPGVK 667

[Close]

BLAST of CmaCh12G007250 vs. ExPASy TrEMBL
Match: A0A6J1IA31 (uncharacterized protein LOC111471475 OS=Cucurbita maxima OX=3661 GN=LOC111471475 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.4e-89
Identity = 174/198 (87.88%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATINSR  +STLIDS ATHNFIVDQEARRLGLTIGKD GKMKVVNSEALPIVGVSKRV
Sbjct: 43  VDATINSRLSKSTLIDSGATHNFIVDQEARRLGLTIGKDHGKMKVVNSEALPIVGVSKRV 102

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVV RMD  DV+LGMEFLLEHKVIPMPL KCLVITDRNPTVIP SIKQ
Sbjct: 103 PFKIGDWTGELDLVVVRMD--DVILGMEFLLEHKVIPMPLAKCLVITDRNPTVIPESIKQ 162

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS I LKRGL REEPTFMAIPLME ATTEET+PNEIKE LNSY DIMPESLPQT
Sbjct: 163 PGNLRMISAIPLKRGLAREEPTFMAIPLMEEATTEETIPNEIKEVLNSYVDIMPESLPQT 222

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEI+L+P VK
Sbjct: 223 LPPRRGIDHEIKLLPRVK 238

[Close]

BLAST of CmaCh12G007250 vs. ExPASy TrEMBL
Match: A0A6J1HU16 (uncharacterized protein LOC111466178 OS=Cucurbita maxima OX=3661 GN=LOC111466178 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.3e-80
Identity = 163/198 (82.32%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +D TINSRP +STLIDS ATHNFI +QEARRLG TIGKDPGKMK VN EALPIVGVSKRV
Sbjct: 27  VDVTINSRPSKSTLIDSGATHNFIANQEARRLGHTIGKDPGKMKAVNIEALPIVGVSKRV 86

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKI DW GELDLV        VVLGM+FLLEHKVIPM L KCLVI DRNPTVI ASIKQ
Sbjct: 87  PFKIEDWIGELDLV--------VVLGMKFLLEHKVIPMSLAKCLVIIDRNPTVILASIKQ 146

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL +EEPTFMAI LMEVATTEETVPNEIKE LN YADIMPESLPQT
Sbjct: 147 PGNLRMISAIQLKRGLAQEEPTFMAIQLMEVATTEETVPNEIKETLNIYADIMPESLPQT 206

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEIE IP VK
Sbjct: 207 LPPRRGIDHEIEFIPGVK 216

[Close]

BLAST of CmaCh12G007250 vs. ExPASy TrEMBL
Match: A0A6J1JPK8 (uncharacterized protein LOC111488689 OS=Cucurbita maxima OX=3661 GN=LOC111488689 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 151/198 (76.26%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATINSRP +STLIDS  THNFI D +ARRLGLTI KD  KMKVV S+ALPIVG+SKRV
Sbjct: 27  VDATINSRPSKSTLIDSGETHNFIADHKARRLGLTIEKDLEKMKVVYSKALPIVGISKRV 86

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FK+G WTGELD VV RM+DF+VVL M FLLEHKV PMPL KCLVITD NPT+IPASIKQ
Sbjct: 87  TFKLGAWTGELDFVVVRMNDFNVVLEMGFLLEHKVNPMPLAKCLVITDHNPTIIPASIKQ 146

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL ++EPTFMAIPL+E  TTEE++P+EIKE L SY +IMPESLPQ 
Sbjct: 147 PGNLRMISVIQLKRGLTQDEPTFMAIPLIEEVTTEESIPSEIKEVLESYFNIMPESLPQA 206

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PR+GIDHEI+L+P VK
Sbjct: 207 LPPRQGIDHEIKLLPGVK 224

[Close]

BLAST of CmaCh12G007250 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.1e-71
Identity = 138/208 (66.35%), Postives = 162/208 (77.88%), Query Frame = 0


Query: 6   EGDSRERAHVLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEA 65
           +G S +    +DATIN    +ST++DS ATHNFI +QEARRL LTI KD GKMKVVN EA
Sbjct: 447 KGTSEKGLMFVDATINCNXAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKVVNFEA 506

Query: 66  LPIVGVSKRVRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRN 125
           LPIVGVSKRV  K+G WTG +D VV RMDDFDVVLGMEFL+EHKVIPMPL KC+++T  +
Sbjct: 507 LPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAKCMIVTSNS 566

Query: 126 PTVIPASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYA 185
           PTV+  SIKQPG +RMIS +QLK+GL REEPTFMAIP++E       VP EI+  +  Y 
Sbjct: 567 PTVVTTSIKQPGGIRMISALQLKKGLNREEPTFMAIPMVEQPVETRDVPPEIQVVMKEYV 626

Query: 186 DIMPESLPQTLSPRRGIDHEIELIPTVK 214
           DIMP+SLP+TL PRRGIDHEIELIP  K
Sbjct: 627 DIMPDSLPKTLPPRRGIDHEIELIPGAK 654

[Close]

BLAST of CmaCh12G007250 vs. NCBI nr
Match: XP_022975706.1 (uncharacterized protein LOC111475733, partial [Cucurbita maxima])

HSP 1 Score: 353.2 bits (905), Expect = 1.6e-93
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATIN +P RSTLIDS ATHNFI DQEARRLGLTIG+DPGKMK +NSEALPIVGVSKRV
Sbjct: 470 VDATINFQPNRSTLIDSGATHNFIADQEARRLGLTIGRDPGKMKAINSEALPIVGVSKRV 529

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPL KCLVITDRNPTVIPASIKQ
Sbjct: 530 PFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQ 589

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL REEPTF+AIPLMEV TTEETVPNEI E LN YADIMPESLPQT
Sbjct: 590 PGNLRMISAIQLKRGLAREEPTFIAIPLMEVTTTEETVPNEINEVLNDYADIMPESLPQT 649

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEIELIP VK
Sbjct: 650 LPPRRGIDHEIELIPGVK 667

[Close]

BLAST of CmaCh12G007250 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 9.6e-91
Identity = 175/198 (88.38%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATINSR  +STLIDS ATHNFI DQEARRLGLTIGKDPGKMK VNSEALPIVGVSK V
Sbjct: 463 VDATINSRLSKSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKGV 522

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVV RMDDFDVVLGMEFLLEHKVIPMPL KCLVITDRNPTVIPASIKQ
Sbjct: 523 PFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQ 582

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL REEPTFMAIPL+E ATTEETVP EIK+ L+SY DIMPESLPQT
Sbjct: 583 PGNLRMISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEIKDVLDSYTDIMPESLPQT 642

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEIEL+P VK
Sbjct: 643 LPPRRGIDHEIELLPGVK 660

[Close]

BLAST of CmaCh12G007250 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 9.6e-91
Identity = 175/198 (88.38%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATINSR  +STLIDS ATHNFI DQEARRLGLTIGKDPGKMK VNSEALPIVGVSK V
Sbjct: 463 VDATINSRLSKSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKGV 522

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVV RMDDFDVVLGMEFLLEHKVIPMPL KCLVITDRNPTVIPASIKQ
Sbjct: 523 PFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQ 582

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL REEPTFMAIPL+E ATTEETVP EIKE L++Y DIMPESLPQT
Sbjct: 583 PGNLRMISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEIKEVLDNYTDIMPESLPQT 642

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEIEL+P VK
Sbjct: 643 LPPRRGIDHEIELLPGVK 660

[Close]

BLAST of CmaCh12G007250 vs. NCBI nr
Match: XP_023526180.1 (uncharacterized protein LOC111789739 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90
Identity = 175/198 (88.38%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATINSR  +STLIDS ATHNFI DQEARRLGLTIGKDPGKMK VNSEALPIVGVSK V
Sbjct: 394 VDATINSRLSKSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKGV 453

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVV RMDDFDVVLGMEFLLEHKVIPMPL KCLVITDRNP VIPASIKQ
Sbjct: 454 PFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPIVIPASIKQ 513

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS IQLKRGL REEPTFMAIPL+E ATTEETVP EIKE L+SY DIMPESLPQT
Sbjct: 514 PGNLRMISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEIKEVLDSYTDIMPESLPQT 573

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEIEL+P VK
Sbjct: 574 LPPRRGIDHEIELLPGVK 591

[Close]

BLAST of CmaCh12G007250 vs. NCBI nr
Match: XP_022972955.1 (uncharacterized protein LOC111471475 [Cucurbita maxima])

HSP 1 Score: 337.4 bits (864), Expect = 9.0e-89
Identity = 174/198 (87.88%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATINSR  +STLIDS ATHNFIVDQEARRLGLTIGKD GKMKVVNSEALPIVGVSKRV
Sbjct: 43  VDATINSRLSKSTLIDSGATHNFIVDQEARRLGLTIGKDHGKMKVVNSEALPIVGVSKRV 102

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
            FKIGDWTGELDLVV RMD  DV+LGMEFLLEHKVIPMPL KCLVITDRNPTVIP SIKQ
Sbjct: 103 PFKIGDWTGELDLVVVRMD--DVILGMEFLLEHKVIPMPLAKCLVITDRNPTVIPESIKQ 162

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
           PGNLRMIS I LKRGL REEPTFMAIPLME ATTEET+PNEIKE LNSY DIMPESLPQT
Sbjct: 163 PGNLRMISAIPLKRGLAREEPTFMAIPLMEEATTEETIPNEIKEVLNSYVDIMPESLPQT 222

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRRGIDHEI+L+P VK
Sbjct: 223 LPPRRGIDHEIKLLPRVK 238

The following BLAST results are available for this feature:

BLAST of CmaCh12G007250 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh12G007250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IEY4	7.7e-94	89.90	uncharacterized protein LOC111475733 OS=Cucurbita maxima OX=3661 GN=LOC111475733...	[more]
A0A6J1IA31	4.4e-89	87.88	uncharacterized protein LOC111471475 OS=Cucurbita maxima OX=3661 GN=LOC111471475...	[more]
A0A6J1HU16	6.3e-80	82.32	uncharacterized protein LOC111466178 OS=Cucurbita maxima OX=3661 GN=LOC111466178...	[more]
A0A6J1JPK8	1.3e-77	76.26	uncharacterized protein LOC111488689 OS=Cucurbita maxima OX=3661 GN=LOC111488689...	[more]
A0A6J1D906	3.1e-71	66.35	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]

BLAST of CmaCh12G007250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975706.1	1.6e-93	89.90	uncharacterized protein LOC111475733, partial [Cucurbita maxima]	[more]
XP_023537907.1	9.6e-91	88.38	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	9.6e-91	88.38	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
XP_023526180.1	2.1e-90	88.38	uncharacterized protein LOC111789739 [Cucurbita pepo subsp. pepo]	[more]
XP_022972955.1	9.0e-89	87.88	uncharacterized protein LOC111471475 [Cucurbita maxima]	[more]

BLAST of CmaCh12G007250 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..132 e-value: 1.3E-16 score: 62.5
None	No IPR available	PFAM	PF08284	RVP_2	coord: 20..111 e-value: 1.1E-9 score: 38.2
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 16..105 e-value: 1.9884E-17 score: 72.3692

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G007250.1	CmaCh12G007250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process