CmaCh12G007210 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pectinesterase
Location	Cma_Chr12: 4018128 .. 4018987 (+)
RNA-Seq Expression	CmaCh12G007210
Synteny	CmaCh12G007210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTTTGACTTCAATTCCACCGTTTCCTTAGACGGTACGGGAAACTTTGTTAAAATCAGTGACGCCATAGTCGCTGCACCGAACTTCACCACCACCAGATTCTACATTCACATCAAACCCGGAATCTATAACGAACATATCGAAATTCCATCTCAAAAAACATTTATTTCGTTGATTGGAGACAATGCTTCCACAACGATCATCGTTGATAATCGAAGCAAAGCCACTGGATTCTCCACGGCAAATTCAGCTACTCTAAGTAAGCTACAATTCATGTAATTTTTGTTCATTCATGTGATATCCCACCTTGATTGGGGAGGAGAACGAAACACCTTTATAAGGATGTTGAAACCTTTCCTTAGCGGACGCGCTTTAAACCTTGAGGGCAAACCTGAAAGGGAAAGATAAAGAAAAACAATATCTGCTAGCTGTGGGTCTGGACTGTTACAAATGGTATTAGAGCCAGACACCAGACCATGTGCCAGCAAGGAGGTTGTTTCCCGAAGGGGGTAGACACGAGGCAGTGTGCCAATAAGGATGCTGTGCCCCGAAAGGGGTGGATTTAGTGGGGGTCCCGCTGGGCTCTGAAGTGGGGTAGAAGTGGGGTGAATTGTGCTATCCCATATTGGTTGGGAGGAGAACGAAACATCCTTTATAAGGATGTGGAAACCTTTCCTTAGCTGATGCGTTTTAAAGTCTGGAAGGGAAGCTTAAAAGAGAAAGTTCAAAGAGGACAATCTCTAATAGCATATCTACTAGTATAATACAATATCTTCTATCTCGTAGGGTGGGCGTGAGCCTGAGCCAGAGCTGTTGTAATTTCTTATTCAAAATTATAACCCAAAACCCATTTTCAGCTG

mRNA sequence

ACCTTTGACTTCAATTCCACCGTTTCCTTAGACGGTACGGGAAACTTTGTTAAAATCAGTGACGCCATAGTCGCTGCACCGAACTTCACCACCACCAGATTCTACATTCACATCAAACCCGGAATCTATAACGAACATATCGAAATTCCATCTCAAAAAACATTTATTTCGTTGATTGGAGACAATGCTTCCACAACGATCATCCTG

Coding sequence (CDS)

ACCTTTGACTTCAATTCCACCGTTTCCTTAGACGGTACGGGAAACTTTGTTAAAATCAGTGACGCCATAGTCGCTGCACCGAACTTCACCACCACCAGATTCTACATTCACATCAAACCCGGAATCTATAACGAACATATCGAAATTCCATCTCAAAAAACATTTATTTCGTTGATTGGAGACAATGCTTCCACAACGATCATCCTG

Protein sequence

TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTIIL

Homology

[Close]

BLAST of CmaCh12G007210 vs. ExPASy Swiss-Prot
Match: O81415 (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3702 GN=PME39 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-13
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 3   DFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDN 62
           ++N +V++DGTGNF  I+DA+ AAPN + TRF I+IK G Y E++E+P +KT I  IGD 
Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDG 278

Query: 63  ASTTII 69
              T+I
Sbjct: 279 IGKTVI 284

[Close]

BLAST of CmaCh12G007210 vs. ExPASy Swiss-Prot
Match: Q9LXK7 (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana OX=3702 GN=PME32 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.6e-12
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           ++ V+ DGTGNF  ISDA++AAP+++T R+ IH+K G+Y E++EI  +K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 65  TTII 69
            T+I
Sbjct: 274 ATVI 277

[Close]

BLAST of CmaCh12G007210 vs. ExPASy Swiss-Prot
Match: Q9SMY7 (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana OX=3702 GN=PME44 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 4   FNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNA 63
           ++ +V+LDGTGNF KI DAI  AP++++TRF I+IK G+Y E++EI  +K  I ++GD  
Sbjct: 211 YDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI 270

Query: 64  STTII 69
             T+I
Sbjct: 271 DVTVI 275

[Close]

BLAST of CmaCh12G007210 vs. ExPASy Swiss-Prot
Match: O81301 (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3702 GN=PME40 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-11
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           N  V+ +GTGN+  I +AI AAPN + TRF I+IK G Y E+IEIP +KT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 65  TTII 69
            T+I
Sbjct: 267 RTVI 270

[Close]

BLAST of CmaCh12G007210 vs. ExPASy Swiss-Prot
Match: O48711 (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3702 GN=PME12 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.7e-10
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 8   VSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTI 67
           V+ DGTGNF  I++AI  APN +  R  I++K G+Y+E+I+IP  KT I LIGD +  T 
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTF 299

Query: 68  I 69
           I
Sbjct: 300 I 300

[Close]

BLAST of CmaCh12G007210 vs. ExPASy TrEMBL
Match: A0A6J1KPG6 (Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111496427 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.4e-30
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG
Sbjct: 24 TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 83

Query: 61 DNASTTIIL 70
          DNASTTII+
Sbjct: 84 DNASTTIIV 92

[Close]

BLAST of CmaCh12G007210 vs. ExPASy TrEMBL
Match: A0A6J1GIG0 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111454459 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.1e-29
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIE+P QKTFISLIG
Sbjct: 24 TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEVPFQKTFISLIG 83

Query: 61 DNASTTIIL 70
          DNASTTII+
Sbjct: 84 DNASTTIIV 92

[Close]

BLAST of CmaCh12G007210 vs. ExPASy TrEMBL
Match: A0A6J1DCN7 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111019286 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          +F FN+ VSLDGTGNFV++SDA  AAPNF TTRFYIHIKPGIY EH+E+P QKTFI+LIG
Sbjct: 26 SFRFNAVVSLDGTGNFVRVSDATAAAPNFGTTRFYIHIKPGIYKEHVEVPVQKTFIALIG 85

Query: 61 DNASTTIIL 70
          D+ASTTII+
Sbjct: 86 DDASTTIIV 94

[Close]

BLAST of CmaCh12G007210 vs. ExPASy TrEMBL
Match: A0A6J1D863 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111018522 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22
Identity = 50/69 (72.46%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          +F FN TVSLDG GNF +++DAI AAPNF+T+RFYIH+KPG YNEH+E+P+QKTFI+LIG
Sbjct: 26 SFTFNITVSLDGMGNFFRVNDAIAAAPNFSTSRFYIHVKPGTYNEHVEVPAQKTFIALIG 85

Query: 61 DNASTTIIL 70
          D+ASTTII+
Sbjct: 86 DDASTTIIV 94

[Close]

BLAST of CmaCh12G007210 vs. ExPASy TrEMBL
Match: A0A6J1DAG5 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111018528 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-22
Identity = 51/68 (75.00%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FN+TVS DG+GNFV++SDAI AAPNF+TTRFYIH+KPGIY EH+E+P QKTFI+LIG+
Sbjct: 27 FMFNATVSPDGSGNFVRVSDAIAAAPNFSTTRFYIHVKPGIYKEHVEVPVQKTFIALIGE 86

Query: 62 NASTTIIL 70
          +ASTTII+
Sbjct: 87 DASTTIIV 94

[Close]

BLAST of CmaCh12G007210 vs. NCBI nr
Match: XP_023002625.1 (probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima])

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG
Sbjct: 24 TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 83

Query: 61 DNASTTIIL 70
          DNASTTII+
Sbjct: 84 DNASTTIIV 92

[Close]

BLAST of CmaCh12G007210 vs. NCBI nr
Match: XP_022951717.1 (probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita moschata])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIE+P QKTFISLIG
Sbjct: 24 TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEVPFQKTFISLIG 83

Query: 61 DNASTTIIL 70
          DNASTTII+
Sbjct: 84 DNASTTIIV 92

[Close]

BLAST of CmaCh12G007210 vs. NCBI nr
Match: KAG6585822.1 (putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIE+P QKTFISLIG
Sbjct: 24 TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEVPFQKTFISLIG 83

Query: 61 DNASTTIIL 70
          DNASTTII+
Sbjct: 84 DNASTTIIV 92

[Close]

BLAST of CmaCh12G007210 vs. NCBI nr
Match: XP_023538248.1 (probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIE+P QKTFISLIG
Sbjct: 24 TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEVPFQKTFISLIG 83

Query: 61 DNASTTIIL 70
          DNASTTII+
Sbjct: 84 DNASTTIIV 92

[Close]

BLAST of CmaCh12G007210 vs. NCBI nr
Match: XP_022151324.1 (pectinesterase 2-like [Momordica charantia])

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-22
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          +F FN+ VSLDGTGNFV++SDA  AAPNF TTRFYIHIKPGIY EH+E+P QKTFI+LIG
Sbjct: 26 SFRFNAVVSLDGTGNFVRVSDATAAAPNFGTTRFYIHIKPGIYKEHVEVPVQKTFIALIG 85

Query: 61 DNASTTIIL 70
          D+ASTTII+
Sbjct: 86 DDASTTIIV 94

[Close]

BLAST of CmaCh12G007210 vs. TAIR 10
Match: AT4G02300.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 3   DFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDN 62
           ++N +V++DGTGNF  I+DA+ AAPN + TRF I+IK G Y E++E+P +KT I  IGD 
Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDG 278

Query: 63  ASTTII 69
              T+I
Sbjct: 279 IGKTVI 284

[Close]

BLAST of CmaCh12G007210 vs. TAIR 10
Match: AT3G43270.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-13
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           ++ V+ DGTGNF  ISDA++AAP+++T R+ IH+K G+Y E++EI  +K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 65  TTII 69
            T+I
Sbjct: 274 ATVI 277

[Close]

BLAST of CmaCh12G007210 vs. TAIR 10
Match: AT4G33220.1 (pectin methylesterase 44 )

HSP 1 Score: 70.1 bits (170), Expect = 7.9e-13
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 4   FNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNA 63
           ++ +V+LDGTGNF KI DAI  AP++++TRF I+IK G+Y E++EI  +K  I ++GD  
Sbjct: 211 YDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI 270

Query: 64  STTII 69
             T+I
Sbjct: 271 DVTVI 275

[Close]

BLAST of CmaCh12G007210 vs. TAIR 10
Match: AT4G02320.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 67.4 bits (163), Expect = 5.1e-12
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           N  V+ +GTGN+  I +AI AAPN + TRF I+IK G Y E+IEIP +KT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 65  TTII 69
            T+I
Sbjct: 267 RTVI 270

[Close]

BLAST of CmaCh12G007210 vs. TAIR 10
Match: AT2G26440.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 64.7 bits (156), Expect = 3.3e-11
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 8   VSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTI 67
           V+ DGTGNF  I++AI  APN +  R  I++K G+Y+E+I+IP  KT I LIGD +  T 
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTF 299

Query: 68  I 69
           I
Sbjct: 300 I 300

The following BLAST results are available for this feature:

BLAST of CmaCh12G007210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81415	2.0e-13	51.52	Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3...	[more]
Q9LXK7	6.6e-12	46.88	Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana OX=3...	[more]
Q9SMY7	1.1e-11	49.23	Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana OX=3...	[more]
O81301	7.2e-11	53.13	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3...	[more]
O48711	4.7e-10	50.82	Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CmaCh12G007210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPG6	9.4e-30	98.55	Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111496427 PE=4 SV=1	[more]
A0A6J1GIG0	6.1e-29	95.65	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111454459 PE=4 SV=1	[more]
A0A6J1DCN7	1.5e-22	76.81	Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111019286 PE=4 SV=1	[more]
A0A6J1D863	4.3e-22	72.46	Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111018522 PE=4 SV=1	[more]
A0A6J1DAG5	5.6e-22	75.00	Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111018528 PE=4 SV=1	[more]

BLAST of CmaCh12G007210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002625.1	2.0e-29	98.55	probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima]	[more]
XP_022951717.1	1.3e-28	95.65	probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita moschata]	[more]
KAG6585822.1	1.3e-28	95.65	putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosp...	[more]
XP_023538248.1	1.3e-28	95.65	probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita pepo subsp. pepo]	[more]
XP_022151324.1	3.0e-22	76.81	pectinesterase 2-like [Momordica charantia]	[more]

BLAST of CmaCh12G007210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02300.1	1.4e-14	51.52	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G43270.1	4.7e-13	46.88	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G33220.1	7.9e-13	49.23	pectin methylesterase 44	[more]
AT4G02320.1	5.1e-12	53.13	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT2G26440.1	3.3e-11	50.82	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 6..68 e-value: 1.0E-14 score: 54.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 2..69 e-value: 2.4E-19 score: 71.9
None	No IPR available	PANTHER	PTHR31707	PECTINESTERASE	coord: 3..68
None	No IPR available	PANTHER	PTHR31707:SF278	PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED	coord: 3..68
IPR018040	Pectinesterase, Tyr active site	PROSITE	PS00800	PECTINESTERASE_1	coord: 30..49
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 4..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G007210.1	CmaCh12G007210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity