CmaCh12G007150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G007150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	single-stranded DNA-binding protein WHY1, chloroplastic-like
Location	Cma_Chr12: 3975161 .. 3978727 (+)
RNA-Seq Expression	CmaCh12G007150
Synteny	CmaCh12G007150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGTGGCACTCTTGACTCGTCTTGGTTTGGTTGTCTCCCTAACCCTCGCCGAGATAGAATAGCCGCGAGGACAAAGCCGAAACCATGCTGCGTCTTCAATGGCTGTCTTCTTCCTTGCTTCCGCCATTAAACCCCGAGCTCTGCGCACAACCCTGTAAGAACCCCAGACGATGTCGTTTCAACTCCTCTCGCCAACTCTTCACTCTCACCGCTACACGAAAGCCTTCTCCAAAATGCCAGTACGCGTCCTGGAACACGCAGCAGCCCGCCTTCGAACCAGCCTCTCAGACCGATTCATATTCGCCACAAACTCGCGCCGGCGGTACTTCCTTATCTGTTTTCTTTCTCGTGTCGGTCATGGTGGTGGTGGAGAGGTGGAATTTGATGCTATTTGGAAATTTGGTTTATGTTGGAACCAAAATGAAGTATATAGCTCCGTTTGTGACATTGACGACATGCACGGTCGAATTATTAAGACCTTGTTCGGTGTTTGTTTCTCTTCTCTCCCTCAAAGCTGGGGTTGTTTAGACATGGTTCAATTTCGAAGGGTTTCTCCCAATCCAAGGGGCTTTTTGAAGTTCTTTGTGTTTTCTGTATTAGTTGCTTTTGATTTCTCGGGTTCTGAAGTTTTATGGTTTGGCTTGTTTGTAGCTGCCGCGGCTTTGCCACCAAGGTTTTTTGTCGGTCATTCGATATACAAAGGAAAGGCTGCCCTGTCCATCGAGCCTAGGCCACCAGAGTTTACACCTATAGATGTATGTTTGACATGGATTCTATATTCATCACAAGAATATGTTCTTTTTCTTTGTTTTTAGTATTGTAAGGTTATGTTCTCTTCTAAATTTCAGTCTGGGGCGTTCAAAGTATCCAGGCAAGGATTTGTAATGCTTCAGCTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTGTTCATTAAAACGGGCTGATATTTAACTCCTAAAGTTATTGAGTTTCTGAATTAATGAGCTAAACTGAAATTCTAGGTTATGCTGATTACTATTCCACAGGTTCCATATTTGCCATCATAGAGATGTGAAAATGTGGTATCATTTCCATTACCATGTTGGAGTAGATGATATTGAAAATACTACAATCATTTTTCTGTTTGCTAAAATCAAACTATTTTTAGGAACAATGATTTGATGATGTCTTGAAAAGGTTGAAGTTATTGTGCATTTGAAATCACAATCTTCCTACTGTTAGAATGAACTAAATTAGATTATACCTTCTTTTGTATATAGGTATTTTCATTATCACTGACAGAATTGGGAAGTTTAGTTGCCCTTGGCCCACGGGAGTCTTGCGAATTTTTCCACGATCCCTACAAGGGAAAAAGGTACTATCTCTTTACAAGCACAATCAAAATCTATACCATTATTTTCTTCTGTTGTGCCATGCTCATGTTTATGTGTATTCTCTGATTACCCCAAACATTTGTACAGTCTGCCCAAGCGTGTTTTCTTAGTTCTTAGAATTGTATGATTGCATCACATTGAACATTGAAATTTGAAAACAATGATGTCTTGATACCTGTAGCTTTAGTAACCAAATACCACCTCCTCTCGCGGGTACATGCTGACCATTTCTCTTTAGTAGCCGAACAAAATGTTTTTTACGTCATAAGTTATTTGTAAGCAAAGCTTTGCAGGTTTGAAAGTACACTATTTTATGATAACAAGAAATGGCAAAATATTTGTTCTACAGCGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCAGATGGTTCTGGACATTTCTTCAATCTCAGTAAGTCTTGTTTTGAAACCTCTTTGATGCATTTGAGTTGAATATAAAGCTGAATGCTGCTTAATGGGTGTTCAATTGAAGAGAGGGAATGTGGTACCTCCAATTGATTTTAATTGGTTGGAAGCATTTTTGTCTCATTTACGTGTCATTTTATCTCCCATACAGCTTTTTTTCTTTCAGGACTTCAACCATGATGTTGTTTTCTGATAGGATTAGTACACGTCCTATCAAATACGCAAACTCAAAAAGAAGCGAGAGAAATAGTTTATGATAAGTTGGTGTGTATGACTCGTGAGGAAGTATATCTTTAGTATAGATGCAGCTTCGTCGTTAGAACGAGTGTAACAAGTATTTGCTTACTTATAGTTCGATGGATAACTATATTTCAACCGTCCTGCTTTAGTTTGCTTCGTTATTAGACCTCTGGAATCGTCTTAAGAACTTATTTTACCCTTTGGTTTTCTTATTCAAGTTGATAAATAATCTACATATCAATCGTCATAATAATTGTCTTCTGTTCCTAATGAAACTTTTTTTTTTAATTCACTTTTCCTATACATAGGGTTGGGTCCTATAAACTGCAACCTAAGAAGCAGGGACACTTTAATTTGGCTAGCATCTCCATGCCCAACACGTGTCAGATACTTAGCCACCACAAATAGAACATTTGCTAGCATAATAGATATGCATTAGACCCTAGTTGGACAAAGCAACCAATATTTCTTTGAGTGCAATGATGCTTGAGAAAGTGTTTCATTTTTTCCTTACCTTTTCTGTTCTATTTTGTTGCACAAGGCGTTCAGAACAAGCTAATCAATGTAGATGAGAGCATTTATATTCCCATCACCAAAGCCGAGTATACTGTACTTGTTGAGGCTTTCAAGGTAAAGTTCTTTCTTGTTTACTTTCTTTTCATGATTGTTTGATTCATTCAGTATCAGTGATTGAGATTAAAGGAGAGAAAAGCTGAGTGTATGATTTGGATCAGGACAGTGGAAACTGCAAAAATTGAGAAAAAAGAACCTACTTAACTCACCAAAATTGAATTGGTCCGGTTGGTTTCAAGAACTCTTATTTGCTGATTCAGTTTCATTAAGTTAAAAACTGAAGATTAGTTGGTTAATTTGGGATCAGACCCTTTTTGTAAGGCCCAAGTTCATCGCTACCAGATATTGTCCTCTTTGGATTTTTTCTTTTTGGGCTTCCCATCAAGGTTTTTAAAACGTGTATGCTAGGGAGAGGTTTCTACACTCTTATAAAGAATTCGTTTTTCTCCCCAACTAATATGGGATCCAAGATGAACTGACGAACTCTTATACTCTTACATGTGATGATCCTTTTGTTTTCTCCAAATTATGTTAATATAATTGATGAATTGGATGTTTAAGGTTGGGTTTGTGATAGGGTTGAATTCATTGAGTTGCAGTTTATCTTGCCGCACCTCATGGGCTGGCATACGATTGCGAACACCATGATGAGGCCTGAAGATAGCAGCCGAGTAAATAACGCCAATCCCAGATATGGGGGTGAGTCGGGTGACTTTGAATGGAGCAGATAGTTACTCCTCCCCCTCCTTGGGCTTAAGATGATGATTGTAGTTTATTTCACTTATCCTGATCTTTCGCTAGTTATGATAGTTCAGTCACTTTTTTTAATCTATGGGTCTACATTTTCCTAATATATCTCTAAACCCAAATATTTTAATATTATATATCTTTTTTGTATATTAGTTTTTAATATTGTTTTTGAA

mRNA sequence

AAAAAGTGGCACTCTTGACTCGTCTTGGTTTGGTTGTCTCCCTAACCCTCGCCGAGATAGAATAGCCGCGAGGACAAAGCCGAAACCATGCTGCGTCTTCAATGGCTGTCTTCTTCCTTGCTTCCGCCATTAAACCCCGAGCTCTGCGCACAACCCTGTAAGAACCCCAGACGATGTCGTTTCAACTCCTCTCGCCAACTCTTCACTCTCACCGCTACACGAAAGCCTTCTCCAAAATGCCAGTACGCGTCCTGGAACACGCAGCAGCCCGCCTTCGAACCAGCCTCTCAGACCGATTCATATTCGCCACAAACTCGCGCCGGCGCTGCCGCGGCTTTGCCACCAAGGTTTTTTGTCGGTCATTCGATATACAAAGGAAAGGCTGCCCTGTCCATCGAGCCTAGGCCACCAGAGTTTACACCTATAGATTCTGGGGCGTTCAAAGTATCCAGGCAAGGATTTGTAATGCTTCAGCTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTTTCATTATCACTGACAGAATTGGGAAGTTTAGTTGCCCTTGGCCCACGGGAGTCTTGCGAATTTTTCCACGATCCCTACAAGGGAAAAAGCGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCAGATGGTTCTGGACATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAATGTAGATGAGAGCATTTATATTCCCATCACCAAAGCCGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGCTGGCATACGATTGCGAACACCATGATGAGGCCTGAAGATAGCAGCCGAGTAAATAACGCCAATCCCAGATATGGGGGTGAGTCGGGTGACTTTGAATGGAGCAGATAGTTACTCCTCCCCCTCCTTGGGCTTAAGATGATGATTGTAGTTTATTTCACTTATCCTGATCTTTCGCTAGTTATGATAGTTCAGTCACTTTTTTTAATCTATGGGTCTACATTTTCCTAATATATCTCTAAACCCAAATATTTTAATATTATATATCTTTTTTGTATATTAGTTTTTAATATTGTTTTTGAA

Coding sequence (CDS)

ATGCTGCGTCTTCAATGGCTGTCTTCTTCCTTGCTTCCGCCATTAAACCCCGAGCTCTGCGCACAACCCTGTAAGAACCCCAGACGATGTCGTTTCAACTCCTCTCGCCAACTCTTCACTCTCACCGCTACACGAAAGCCTTCTCCAAAATGCCAGTACGCGTCCTGGAACACGCAGCAGCCCGCCTTCGAACCAGCCTCTCAGACCGATTCATATTCGCCACAAACTCGCGCCGGCGCTGCCGCGGCTTTGCCACCAAGGTTTTTTGTCGGTCATTCGATATACAAAGGAAAGGCTGCCCTGTCCATCGAGCCTAGGCCACCAGAGTTTACACCTATAGATTCTGGGGCGTTCAAAGTATCCAGGCAAGGATTTGTAATGCTTCAGCTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTTTCATTATCACTGACAGAATTGGGAAGTTTAGTTGCCCTTGGCCCACGGGAGTCTTGCGAATTTTTCCACGATCCCTACAAGGGAAAAAGCGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCAGATGGTTCTGGACATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAATGTAGATGAGAGCATTTATATTCCCATCACCAAAGCCGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGCTGGCATACGATTGCGAACACCATGATGAGGCCTGAAGATAGCAGCCGAGTAAATAACGCCAATCCCAGATATGGGGGTGAGTCGGGTGACTTTGAATGGAGCAGATAG

Protein sequence

MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR

Homology

[Close]

BLAST of CmaCh12G007150 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 9.4e-86
Identity = 148/213 (69.48%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 68  QTDSYSPQ------TRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKVS 127
           QTD +  Q      +    A  LP RF+VGHSIYKGKAAL+++PR PEF  +DSGAFK+S
Sbjct: 55  QTDYFEKQRFGDSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLS 114

Query: 128 RQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGK 187
           + GF++LQ AP+AGVRQYDWS+KQVFSLS+TE+G+LV+LGPRESCEFFHDP+KGKSDEGK
Sbjct: 115 KDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGK 174

Query: 188 VRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWH 247
           VRK+LKVEPLPDGSGHFFNLSVQNKL+NVDESIYIPIT+AE+ VL+ AF F+LP+L+GWH
Sbjct: 175 VRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWH 234

Query: 248 TIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
             AN+ ++PE++SRVNNA+P YG   GD+EW+R
Sbjct: 235 AFANS-IKPEETSRVNNASPNYG---GDYEWNR 263

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BLAST of CmaCh12G007150 vs. ExPASy Swiss-Prot
Match: Q66GR6 (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY3 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.4e-84
Identity = 154/230 (66.96%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 46  KPSPKCQYASWNTQQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEP 105
           KP+ + +    + Q   FE     DS S Q     A    PRF+VGHSIYKGKAAL+IEP
Sbjct: 47  KPTARLKLTVKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEP 106

Query: 106 RPPEFTPIDSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRES 165
           R PEF  ++SGAFK++++GF++LQ APAAGVRQYDWSRKQVFSLS+TE+G+LV+LGPRES
Sbjct: 107 RAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRES 166

Query: 166 CEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYT 225
           CEFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAE+ 
Sbjct: 167 CEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFA 226

Query: 226 VLVEAFKFILPHLMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           VL+ AF F+LPHL+GW   AN+ ++PEDS+R+NNA+P+YG   GD+EWSR
Sbjct: 227 VLISAFNFVLPHLIGWSAFANS-IKPEDSNRLNNASPKYG---GDYEWSR 268

[Close]

BLAST of CmaCh12G007150 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.3e-82
Identity = 145/212 (68.40%), Postives = 176/212 (83.02%), Query Frame = 0


Query: 63  FEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKVSR 122
           FEP  Q      Q +     A  P+ FVG+SIYKGKAAL++EPR PEF+P+DSGAFK+SR
Sbjct: 71  FEPQQQQQQQQQQPQ----GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSR 130

Query: 123 QGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGKV 182
           +G VMLQ APAAGVRQYDWSRKQVFSLS+TE+GS+++LG ++SCEFFHDP KG+SDEG+V
Sbjct: 131 EGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRV 190

Query: 183 RKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHT 242
           RK+LKVEPLPDGSGHFFNLSVQNKLIN+DE+IYIP+TKAE+ VLV AF F++P+L+GWHT
Sbjct: 191 RKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHT 250

Query: 243 IANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
             N+  +PED+SR NNANPR G E    EW+R
Sbjct: 251 AVNS-FKPEDASRSNNANPRSGAE---LEWNR 274

[Close]

BLAST of CmaCh12G007150 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.4e-67
Identity = 126/232 (54.31%), Postives = 162/232 (69.83%), Query Frame = 0


Query: 49  PKCQYASWNTQQPAFEPASQTDSYSPQTRAGAAAALPP------RFFVGHSIYKGKAALS 108
           P C  AS       F+P +      P  R       PP      R F  +SIYKGKAALS
Sbjct: 47  PACPVAS-PRHSDYFDPRA-----PPPPRGDGGYGRPPNGAQDGRVFTSYSIYKGKAALS 106

Query: 109 IEPRPPEFTPIDSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGP 168
            +PRPP F P+DSGA+KV+++GFV+LQ APA   RQYDW+RKQVFSLS+ E+G+L+ LGP
Sbjct: 107 FDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGP 166

Query: 169 RESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAE 228
            +SCEFFHDP+KG+S+EGKVRK+LK+EP PDG+G FFNLSVQN+LINVDESIYIPITK E
Sbjct: 167 TDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNLSVQNRLINVDESIYIPITKGE 226

Query: 229 YTVLVEAFKFILPHLMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           + V+V  F +I+PHLMGW T  ++ ++PE+S   +         + ++EW R
Sbjct: 227 FAVIVSTFNYIIPHLMGWSTFVSS-IKPEESRPYSRPQ-----STSEYEWRR 266

[Close]

BLAST of CmaCh12G007150 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-44
Identity = 88/180 (48.89%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 66  ASQTDSYSP-QTRAGAAAALPP-RFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKVSRQ 125
           AS ++S +P +   G  AA P  R F  +SI+KGKAALS+EP  P FT IDSG  ++ R+
Sbjct: 30  ASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRR 89

Query: 126 GFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGKVR 185
           G +M+   PA G R+YDW +KQ F+LS TE+GSL+++G ++S EFFHDP    S+ G+VR
Sbjct: 90  GSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVR 149

Query: 186 KILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTI 244
           K L V+P  DGSG+F +LSV N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +
Sbjct: 150 KSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 209

[Close]

BLAST of CmaCh12G007150 vs. ExPASy TrEMBL
Match: A0A6J1KPI3 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496070 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.1e-157
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQ 60
           MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQ
Sbjct: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQ 60

Query: 61  PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKV 120
           PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKV
Sbjct: 61  PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKV 120

Query: 121 SRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEG 180
           SRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEG
Sbjct: 121 SRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEG 180

Query: 181 KVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGW 240
           KVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGW
Sbjct: 181 KVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGW 240

Query: 241 HTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           HTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR
Sbjct: 241 HTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 274

[Close]

BLAST of CmaCh12G007150 vs. ExPASy TrEMBL
Match: A0A6J1GJ86 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111454358 PE=3 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.6e-152
Identity = 269/275 (97.82%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLN-PELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQ 60
           MLRLQWLSSSLLPPLN PELCAQPCKNPRRC FNSSRQLFTLTATRKPSPKCQYASWNTQ
Sbjct: 1   MLRLQWLSSSLLPPLNPPELCAQPCKNPRRCGFNSSRQLFTLTATRKPSPKCQYASWNTQ 60

Query: 61  QPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK 120
           QPAFEPASQTDS+SPQT AGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK
Sbjct: 61  QPAFEPASQTDSFSPQTSAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK 120

Query: 121 VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE 180
           VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE
Sbjct: 121 VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE 180

Query: 181 GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           WHTIANT MRPEDSSRVNNANPRYGGESG FEWSR
Sbjct: 241 WHTIANTTMRPEDSSRVNNANPRYGGESGGFEWSR 275

[Close]

BLAST of CmaCh12G007150 vs. ExPASy TrEMBL
Match: A0A5D3BP35 (Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00810 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.8e-131
Identity = 235/277 (84.84%), Postives = 249/277 (89.89%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60
           MLRLQWLSSSLLP  NPEL  +   NPR C  N  R L TLT TRKPSPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQY-SWNTHQ 60

Query: 61  -QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGA 120
            QQ +FEPASQTDS+SPQ+RAGAAAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGA
Sbjct: 61  HQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120

Query: 121 FKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKS 180
           FK+SR+G VMLQ APAAGVRQYDWSRKQVFSLS+TELGSL+ALGPRE+CEFFHDPYKGKS
Sbjct: 121 FKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240

Query: 241 MGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           MGWHTIANTM +PEDSSR N ANPRYG   GDFEW+R
Sbjct: 241 MGWHTIANTMTKPEDSSRGNTANPRYG---GDFEWNR 273

[Close]

BLAST of CmaCh12G007150 vs. ExPASy TrEMBL
Match: A0A1S3C3B0 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496412 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.8e-131
Identity = 235/277 (84.84%), Postives = 249/277 (89.89%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60
           MLRLQWLSSSLLP  NPEL  +   NPR C  N  R L TLT TRKPSPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQY-SWNTHQ 60

Query: 61  -QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGA 120
            QQ +FEPASQTDS+SPQ+RAGAAAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGA
Sbjct: 61  HQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120

Query: 121 FKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKS 180
           FK+SR+G VMLQ APAAGVRQYDWSRKQVFSLS+TELGSL+ALGPRE+CEFFHDPYKGKS
Sbjct: 121 FKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240

Query: 241 MGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           MGWHTIANTM +PEDSSR N ANPRYG   GDFEW+R
Sbjct: 241 MGWHTIANTMTKPEDSSRGNTANPRYG---GDFEWNR 273

[Close]

BLAST of CmaCh12G007150 vs. ExPASy TrEMBL
Match: A0A6J1DD66 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111019296 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.4e-126
Identity = 232/281 (82.56%), Postives = 247/281 (87.90%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPP-LNPELCAQP---CKNPRRCRFNSSRQLFTLTATRKPSPKCQYASW 60
           MLRLQWLSSSLLPP LNPEL  +    C N R C  NSSR L TLTATRKPSPKCQY SW
Sbjct: 1   MLRLQWLSSSLLPPLLNPELSPETSHLCPNRRLCTLNSSRPLLTLTATRKPSPKCQY-SW 60

Query: 61  NTQQ---PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPI 120
           +TQQ   P  EP SQ  S+SPQTRAGAA ALPPRFFVGHSIYKGKA L++EPRPPEFTP+
Sbjct: 61  STQQQQPPPSEPGSQAHSFSPQTRAGAAGALPPRFFVGHSIYKGKAVLTVEPRPPEFTPL 120

Query: 121 DSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPY 180
           DSGAFK+SR+GFV+LQ APAAGVRQYDWSRKQVFSLS+TELGSL+ALG R+SCEFFHDPY
Sbjct: 121 DSGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGLRDSCEFFHDPY 180

Query: 181 KGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFI 240
           KGKS+EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFI
Sbjct: 181 KGKSEEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFI 240

Query: 241 LPHLMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           LPHLMGWH I+NTM R EDS RVNNANPRYG   GDFEWSR
Sbjct: 241 LPHLMGWHMISNTMTRAEDSGRVNNANPRYG---GDFEWSR 277

[Close]

BLAST of CmaCh12G007150 vs. NCBI nr
Match: XP_023002109.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 564.7 bits (1454), Expect = 4.4e-157
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQ 60
           MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQ
Sbjct: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQQ 60

Query: 61  PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKV 120
           PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKV
Sbjct: 61  PAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKV 120

Query: 121 SRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEG 180
           SRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEG
Sbjct: 121 SRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEG 180

Query: 181 KVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGW 240
           KVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGW
Sbjct: 181 KVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGW 240

Query: 241 HTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           HTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR
Sbjct: 241 HTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 274

[Close]

BLAST of CmaCh12G007150 vs. NCBI nr
Match: XP_022951594.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita moschata] >KAG6585816.1 Single-stranded DNA-binding protein WHY1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020749.1 Single-stranded DNA-binding protein WHY1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.5 bits (1412), Expect = 3.2e-152
Identity = 269/275 (97.82%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLN-PELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQ 60
           MLRLQWLSSSLLPPLN PELCAQPCKNPRRC FNSSRQLFTLTATRKPSPKCQYASWNTQ
Sbjct: 1   MLRLQWLSSSLLPPLNPPELCAQPCKNPRRCGFNSSRQLFTLTATRKPSPKCQYASWNTQ 60

Query: 61  QPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK 120
           QPAFEPASQTDS+SPQT AGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK
Sbjct: 61  QPAFEPASQTDSFSPQTSAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK 120

Query: 121 VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE 180
           VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE
Sbjct: 121 VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE 180

Query: 181 GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           WHTIANT MRPEDSSRVNNANPRYGGESG FEWSR
Sbjct: 241 WHTIANTTMRPEDSSRVNNANPRYGGESGGFEWSR 275

[Close]

BLAST of CmaCh12G007150 vs. NCBI nr
Match: XP_023537082.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 544.7 bits (1402), Expect = 4.7e-151
Identity = 267/275 (97.09%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLN-PELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQ 60
           MLRLQWLSSSLLPPLN PELCAQPC N RRCRFNSSRQLFTLTATRKPSPKCQYASWNTQ
Sbjct: 1   MLRLQWLSSSLLPPLNPPELCAQPCSNRRRCRFNSSRQLFTLTATRKPSPKCQYASWNTQ 60

Query: 61  QPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK 120
           QPAFEPASQTDS+SPQT AGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK
Sbjct: 61  QPAFEPASQTDSFSPQTSAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFK 120

Query: 121 VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDE 180
           VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLV+LGPRESCEFFHDPYKGKSDE
Sbjct: 121 VSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVSLGPRESCEFFHDPYKGKSDE 180

Query: 181 GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           WHTIANTM RPEDSSRVNNANPRYGGESG FEWSR
Sbjct: 241 WHTIANTMTRPEDSSRVNNANPRYGGESGGFEWSR 275

[Close]

BLAST of CmaCh12G007150 vs. NCBI nr
Match: XP_008456468.1 (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo] >KAA0036450.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa] >TYK00036.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa])

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130
Identity = 235/277 (84.84%), Postives = 249/277 (89.89%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60
           MLRLQWLSSSLLP  NPEL  +   NPR C  N  R L TLT TRKPSPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQY-SWNTHQ 60

Query: 61  -QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGA 120
            QQ +FEPASQTDS+SPQ+RAGAAAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGA
Sbjct: 61  HQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120

Query: 121 FKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKS 180
           FK+SR+G VMLQ APAAGVRQYDWSRKQVFSLS+TELGSL+ALGPRE+CEFFHDPYKGKS
Sbjct: 121 FKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240

Query: 241 MGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           MGWHTIANTM +PEDSSR N ANPRYG   GDFEW+R
Sbjct: 241 MGWHTIANTMTKPEDSSRGNTANPRYG---GDFEWNR 273

[Close]

BLAST of CmaCh12G007150 vs. NCBI nr
Match: XP_038884311.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 461.5 bits (1186), Expect = 5.2e-126
Identity = 232/278 (83.45%), Postives = 244/278 (87.77%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60
           MLRLQWLSSSLLP  NPEL  +   N R C  NS R L TL    KPSPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTL----KPSPKCQY-SWNTQQ 60

Query: 61  --QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSG 120
             QQ  FEP SQTDS+S QTRA AAAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSG
Sbjct: 61  QQQQSPFEPGSQTDSFSSQTRARAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120

Query: 121 AFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGK 180
           AFK+SR+GFV+LQ APAAGVRQYDWSRKQVFSLS+TELGSLVALGPRESCEFFHDPYKGK
Sbjct: 121 AFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK 180

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPH 240
           SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKF+LPH
Sbjct: 181 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPH 240

Query: 241 LMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           LMGWHTIANT+ RPEDS RVNNANPRYG   GDFEW+R
Sbjct: 241 LMGWHTIANTITRPEDSIRVNNANPRYG---GDFEWNR 270

[Close]

BLAST of CmaCh12G007150 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 318.2 bits (814), Expect = 6.6e-87
Identity = 148/213 (69.48%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 68  QTDSYSPQ------TRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKVS 127
           QTD +  Q      +    A  LP RF+VGHSIYKGKAAL+++PR PEF  +DSGAFK+S
Sbjct: 55  QTDYFEKQRFGDSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLS 114

Query: 128 RQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGK 187
           + GF++LQ AP+AGVRQYDWS+KQVFSLS+TE+G+LV+LGPRESCEFFHDP+KGKSDEGK
Sbjct: 115 KDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGK 174

Query: 188 VRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWH 247
           VRK+LKVEPLPDGSGHFFNLSVQNKL+NVDESIYIPIT+AE+ VL+ AF F+LP+L+GWH
Sbjct: 175 VRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWH 234

Query: 248 TIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
             AN+ ++PE++SRVNNA+P YG   GD+EW+R
Sbjct: 235 AFANS-IKPEETSRVNNASPNYG---GDYEWNR 263

[Close]

BLAST of CmaCh12G007150 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 317.4 bits (812), Expect = 1.1e-86
Identity = 153/229 (66.81%), Postives = 187/229 (81.66%), Query Frame = 0


Query: 46  KPSPKCQYASWNTQQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEP 105
           KP+ + +    + Q   FE     DS S Q     A    PRF+VGHSIYKGKAAL+IEP
Sbjct: 47  KPTARLKLTVKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEP 106

Query: 106 RPPEFTPIDSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRES 165
           R PEF  ++SGAFK++++GF++LQ APAAGVRQYDWSRKQVFSLS+TE+G+LV+LGPRES
Sbjct: 107 RAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRES 166

Query: 166 CEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTV 225
           CEFFHDP+KGK DEGKVRK+LKVEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAE+ V
Sbjct: 167 CEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAV 226

Query: 226 LVEAFKFILPHLMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           L+ AF F+LPHL+GW   AN+ ++PEDS+R+NNA+P+YG   GD+EWSR
Sbjct: 227 LISAFNFVLPHLIGWSAFANS-IKPEDSNRLNNASPKYG---GDYEWSR 267

[Close]

BLAST of CmaCh12G007150 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 314.3 bits (804), Expect = 9.6e-86
Identity = 154/230 (66.96%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 46  KPSPKCQYASWNTQQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEP 105
           KP+ + +    + Q   FE     DS S Q     A    PRF+VGHSIYKGKAAL+IEP
Sbjct: 47  KPTARLKLTVKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEP 106

Query: 106 RPPEFTPIDSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRES 165
           R PEF  ++SGAFK++++GF++LQ APAAGVRQYDWSRKQVFSLS+TE+G+LV+LGPRES
Sbjct: 107 RAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRES 166

Query: 166 CEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYT 225
           CEFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAE+ 
Sbjct: 167 CEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFA 226

Query: 226 VLVEAFKFILPHLMGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 275
           VL+ AF F+LPHL+GW   AN+ ++PEDS+R+NNA+P+YG   GD+EWSR
Sbjct: 227 VLISAFNFVLPHLIGWSAFANS-IKPEDSNRLNNASPKYG---GDYEWSR 268

[Close]

BLAST of CmaCh12G007150 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-45
Identity = 88/180 (48.89%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 66  ASQTDSYSP-QTRAGAAAALPP-RFFVGHSIYKGKAALSIEPRPPEFTPIDSGAFKVSRQ 125
           AS ++S +P +   G  AA P  R F  +SI+KGKAALS+EP  P FT IDSG  ++ R+
Sbjct: 30  ASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRR 89

Query: 126 GFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGKVR 185
           G +M+   PA G R+YDW +KQ F+LS TE+GSL+++G ++S EFFHDP    S+ G+VR
Sbjct: 90  GSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVR 149

Query: 186 KILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTI 244
           K L V+P  DGSG+F +LSV N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +
Sbjct: 150 KSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 209

The following BLAST results are available for this feature:

BLAST of CmaCh12G007150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9S3	9.4e-86	69.48	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q66GR6	1.4e-84	66.96	Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9LL85	1.3e-82	68.40	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]
B2LXS7	4.4e-67	54.31	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]
Q8VYF7	1.8e-44	48.89	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of CmaCh12G007150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPI3	2.1e-157	100.00	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A6J1GJ86	1.6e-152	97.82	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A5D3BP35	5.8e-131	84.84	Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C3B0	5.8e-131	84.84	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A6J1DD66	7.4e-126	82.56	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charan...	[more]

BLAST of CmaCh12G007150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002109.1	4.4e-157	100.00	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022951594.1	3.2e-152	97.82	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita moschata...	[more]
XP_023537082.1	4.7e-151	97.09	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_008456468.1	1.2e-130	84.84	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis...	[more]
XP_038884311.1	5.2e-126	83.45	single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Beninca...	[more]

BLAST of CmaCh12G007150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14410.1	6.6e-87	69.48	ssDNA-binding transcriptional regulator	[more]
AT2G02740.2	1.1e-86	66.81	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	9.6e-86	66.96	ssDNA-binding transcriptional regulator	[more]
AT1G71260.1	1.3e-45	48.89	WHIRLY 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 79..252 e-value: 9.9E-76 score: 255.3
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 86..266
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 94..228 e-value: 2.3E-59 score: 199.1
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 68..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..274
None	No IPR available	PANTHER	PTHR31745:SF3	SINGLE-STRANDED DNA-BINDING PROTEIN WHY3, CHLOROPLASTIC	coord: 68..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G007150.1	CmaCh12G007150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding