CmaCh12G006760 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G006760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Location	Cma_Chr12: 3653173 .. 3656018 (-)
RNA-Seq Expression	CmaCh12G006760
Synteny	CmaCh12G006760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTTTCTTAAAAGGAAGTGCAGAAGCTGAACGACTTGTTCCTCAAGATATCTGGGTCAATTTTTTTCACGAGAAATCAAGCAACACAAAGACTCCCGCGATCTTCCCAATCTTTCTCACAACTCTCTCTCTCAAGGTTCTTAACTTCTTTTTCTCTCCATTTTTTATCTGCCATGTTTTTGTTTATAGCATTTCTCTCTCTCGGCGATGGTTTACGATTTGTCTGGTGAATTATGCTGTGTTTGATAGTTTGTTTTTATAGTTTCTGCTAGTTTCGTTGTGTTCTTTGATCCTCTGCGGAATTAGGGAGGAAAAACAATGAATTCTGTATGCCTCCAGTTCTCCCTCTCTTCTCTGTTTTTGTCTCGTCTCTGCATCATATTCTGTACAGAAAATTTATTGATGAGCCTCACACTACGTGTCTGCCTGTTTCGAAGAATCAAATGTGAATTTCCAGTTTCTGTGCTCTCAATTATAATTACCGTTGCTTTTAAGATACGTTTATTATTGTGTTCTTCATGGACTTTCAAGCGACACTACAAAAATATGTATAGTTTTAAGCTATAAATTTGAAGTTAGGAAACAAATAATTGCTGTTTCGTAGCCAAAGTAAAAAATCCTGTGTAAAGTGTATGTTGTCTGCTCAACCCAATTCAACACTCTTGGGATTGGATTGGTGTGGAAATTCAAGTTGGTTGAACAATAAGCCCCAAAATTTTGATTGGTGGGTCACTTGGGTCAATTCAATGCTTTCAACACTAAAACATGCCTTCATATGTGTGTATTTCCTTTGTTAATCTATTTCAAATTTGTTGCTGATTTTTCATAATACTAAAGATTTGTAGATCAGTGTGATCTTTCTGATGGCAACTGAACCGAAGGCAGGTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGACGATGAGTTCGAAGAGTTCGAGATTAATGAAGGTATGACTTGTAATTATTTGTCTTCTATTTTTCATAATACTATCGTTTTCAATTGGCACTCATTTTTCATTTATGCTTGTCCTGCAATTTCTTCTTTGTTTCATCCAAAGAAATGTTGAAGTTAAGTAACAGTCTGGGTGATCCTGTTACAGATTCAGTCCTAATTGCTAGTTTTCTTCATTTGGATGCCCTATTACTGTTGTTATGTTCACTCACTGTTTCATGGTAAATCCTTGGAGTCCCATGTTCGAAAAAAATGAGCTAGAATGTTTGTAAACTCAATTACAATAGTGACAATCAATGGACAAAAGTATGAACCTGGATAAAGAAGAGTTGGAATAATAGTTTTTAAAAGATATGCCCCTTAAGTATACTATATTCGGTGGGTCTTTGATACAATGCCATTGCAAGTGTACGCACATTACACTCATGGTAGAAAGAAGAACCCATTGGTTGAATTTTTCTTTACGCAGTTCTTTCGGTTTCCGTATTGTAATACTGAGTTCTCCACCTCCATTTCTATTTTTAGTTAATTTCCTTGTTTTAGGAGGATGGTTCTCCATGATTGACTCATGGTTTCATTGACGTAGCAATGTATTTATACAACTTGTATAAATAGTCATAAACATCAATGAAGATGGTACCTAAGAATTTTCAATTCAGTCTTGAGTACTCTTAACTTAAGGTTCCCTCTATTTGAGCCTTACAATTATCCAAAATAGGTCGAAAGAAAAATTCTACTTCTTTCCCCACACTGTCTTTTTCCACTTACAACCCATAACTTGATTGCAGACTTGGACCTGTAACCATCTTTTTCTTTTTAGGATATTAATACCTTCTAGATGTTTGCTTTTAAGTTGACATAATTACTTATGAAAAAAATGTTAATTGAAATGTTTTTTTTCCTCTAAAGATAAAAGAAGTTTCCTTGTATCCTCAAAAATACTAGTAGTAATACTCAAGAAGTTGGTGGTAGAGCTTTCAAATGGAGTTTGTGGTTGATTTCTGAATAATCTACAGATTTTGCTTTGATTGCTGAGGGATTGGCAGAATAAACTTATTCCAATTTTATATTTATACAAACAAATTGATGATGACCTTAAAGCTAAAACCACTTCACTTTGCTCAATGGAAGTGATTACGGCTACCTGACCAATATTCATATCGTATGCGTGGTAGCTTGATCTTGTTGTTGACTGAAACTATGATTTGAAGATCCTGCATTTCCTTTAAAAGGAAAAATTTGTAGTCATAAGGAAGTTTTGGAGTTGTTTAAATGGAGCATTATAGATTGCTGGTCTGAATCTGTTAATTGTACTCACTAAGAATGTGTTCTTGTTGATCTTTCACTTGCTTAATGTTGACTTAGTACTCGGCTGAACATCTCTCGACTACAAAAACCAAAGTTCTTTTGTTCTTGGCATACCATCTTTAAGCCTTCGGATATTTTTATAACCATTCCTTGTGTTCTGTTTGTTAAAATGAATTACAGAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGACGATGACGATGTGAATGACGACTTCTCGTTGCAACTTAAGAGAGAATTGGAGGACAATGCTGAGAGAAAATGAATAGACACTTAGGAATCTTATTCAATCAGGAATGTACCAAAAACTTCAACCATTATGAACTTTCTTCCTAATATTGATGCCCATTCTTCCATAATATTTGAATTTTCTTCCTAGTACACGTTAGTGATACTAACACCATACATCGAATGCTTGCTTGGCTAGCTGCATCAACTTGGATCCGACCTTGAGGTTTAAAATTTGATCAATTTTGGGTGTGGCCTTGTGAGAAGGAATTGATGAGGGGCAAGAAAAAAGGTACGGAATTCTGTAT

mRNA sequence

GATTTTTCTTAAAAGGAAGTGCAGAAGCTGAACGACTTGTTCCTCAAGATATCTGGGTCAATTTTTTTCACGAGAAATCAAGCAACACAAAGACTCCCGCGATCTTCCCAATCTTTCTCACAACTCTCTCTCTCAAGATTTGTAGATCAGTGTGATCTTTCTGATGGCAACTGAACCGAAGGCAGGTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGACGATGAGTTCGAAGAGTTCGAGATTAATGAAGAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGACGATGACGATGTGAATGACGACTTCTCGTTGCAACTTAAGAGAGAATTGGAGGACAATGCTGAGAGAAAATGAATAGACACTTAGGAATCTTATTCAATCAGGAATGTACCAAAAACTTCAACCATTATGAACTTTCTTCCTAATATTGATGCCCATTCTTCCATAATATTTGAATTTTCTTCCTAGTACACGTTAGTGATACTAACACCATACATCGAATGCTTGCTTGGCTAGCTGCATCAACTTGGATCCGACCTTGAGGTTTAAAATTTGATCAATTTTGGGTGTGGCCTTGTGAGAAGGAATTGATGAGGGGCAAGAAAAAAGGTACGGAATTCTGTAT

Coding sequence (CDS)

ATGGCAACTGAACCGAAGGCAGGTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGACGATGAGTTCGAAGAGTTCGAGATTAATGAAGAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGACGATGACGATGTGAATGACGACTTCTCGTTGCAACTTAAGAGAGAATTGGAGGACAATGCTGAGAGAAAATGA

Protein sequence

MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELEDNAERK

Homology

[Close]

BLAST of CmaCh12G006760 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.7e-21
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA EPKA  E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKRELEDNAERK 73
          QLK+ELE+ +E+K
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of CmaCh12G006760 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.1e-21
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MATEPKAGTEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA EPKA T E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELEDNAERK 73
           QL++ELE+  ++K
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh12G006760 vs. ExPASy Swiss-Prot
Match: Q7SA04 (Putative 26S proteasome complex subunit sem-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sem-1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.3e-06
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 2  ATEPK--AGTEEVKVDLFEDDDEFEEFEINEEWE------VKEGKEITQQWEDDWDDDDV 61
          +TEPK      E K  + E+DDEFE+F + ++WE       K   E    WE+ WDDDD 
Sbjct: 12 STEPKPEQPVTEKKTAVLEEDDEFEDFPV-DDWEAEDTEAAKGNNEAKHLWEESWDDDDT 71

Query: 62 NDDFSLQLKRELE 67
          +DDFS QLK EL+
Sbjct: 72 SDDFSAQLKEELK 83

[Close]

BLAST of CmaCh12G006760 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 10 EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE 67
          + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELE 61

[Close]

BLAST of CmaCh12G006760 vs. ExPASy Swiss-Prot
Match: Q54K21 (Probable 26S proteasome complex subunit sem1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287633 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 0


Query: 4  EPKAGT--EEVKVDLFEDDDEFEEFEINEEWEVKEGKEIT-QQWEDDWDDDDVNDDFSLQ 63
          EPKA    +E  V++ E DDEFEEFE N    + EG++ + +QWEDDWD D ++DDFS Q
Sbjct: 9  EPKAEVKPKEDNVEVIE-DDEFEEFEDN----MAEGEDNSKEQWEDDWDTDKIDDDFSKQ 68

Query: 64 LKRELEDNAERK 73
          L+ E+E ++  K
Sbjct: 69 LRAEIESHSTMK 75

[Close]

BLAST of CmaCh12G006760 vs. ExPASy TrEMBL
Match: A0A6J1KMT1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC111496037 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELEDNAERK
Sbjct: 61 LKRELEDNAERK 72

[Close]

BLAST of CmaCh12G006760 vs. ExPASy TrEMBL
Match: A0A6J1GHI9 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita moschata OX=3662 GN=LOC111454218 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEPKA TEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 2  MATEPKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 61

Query: 61 LKRELEDNAERK 73
          LKRELE NA RK
Sbjct: 62 LKRELEHNAVRK 73

[Close]

BLAST of CmaCh12G006760 vs. ExPASy TrEMBL
Match: A0A6J1KGK6 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111494033 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.6e-27
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA TEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE N E+K
Sbjct: 61 LKRELESNVEKK 72

[Close]

BLAST of CmaCh12G006760 vs. ExPASy TrEMBL
Match: A0A0A0KIG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.6e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE+NAE+K
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of CmaCh12G006760 vs. ExPASy TrEMBL
Match: A0A1S3CMK4 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC103502626 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.6e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE+NAE+K
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: XP_023002030.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita maxima] >XP_023002031.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita maxima])

HSP 1 Score: 140.6 bits (353), Expect = 5.4e-30
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELEDNAERK
Sbjct: 61 LKRELEDNAERK 72

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: XP_022951372.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita moschata] >XP_022951373.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita moschata])

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATEPKA TEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 2  MATEPKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 61

Query: 61 LKRELEDNAERK 73
          LKRELE NA RK
Sbjct: 62 LKRELEHNAVRK 73

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: KAG6599102.1 (Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.8 bits (325), Expect = 9.5e-27
Identity = 67/72 (93.06%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA TEEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE NAE+K
Sbjct: 61 LKRELESNAEKK 72

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: XP_022999790.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima])

HSP 1 Score: 129.8 bits (325), Expect = 9.5e-27
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA TEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE N E+K
Sbjct: 61 LKRELESNVEKK 72

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: XP_004144232.1 (protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED: protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucumis melo] >KGN47541.1 hypothetical protein Csa_019014 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 9.5e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE+NAE+K
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of CmaCh12G006760 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V )

HSP 1 Score: 101.3 bits (251), Expect = 3.4e-22
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA EPKA  E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKRELEDNAERK 73
          QLK+ELE+ +E+K
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of CmaCh12G006760 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-22
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MATEPKAGTEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA EPKA T E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELEDNAERK 73
           QL++ELE+  ++K
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh12G006760 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-22
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MATEPKAGTEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA EPKA T E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELEDNAERK 73
           QL++ELE+  ++K
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh12G006760 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 80.5 bits (197), Expect = 6.1e-16
Identity = 54/115 (46.96%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MATEPKAGTEE-VKVDLFEDDDEFEEFEINE----------------------------- 60
           MA EPKA T E VK+DLFEDDDEFEEFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELEDNAERK 73
                       +W E +E KE++QQWEDDWDDDDVNDDFS QL++ELE+  ++K
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

The following BLAST results are available for this feature:

BLAST of CmaCh12G006760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL96	4.7e-21	73.97	Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) ...	[more]
Q9XIR8	8.1e-21	72.97	Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1...	[more]
Q7SA04	7.3e-06	45.21	Putative 26S proteasome complex subunit sem-1 OS=Neurospora crassa (strain ATCC ...	[more]
Q3ZBR6	1.2e-05	52.63	26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1	[more]
Q54K21	1.2e-05	48.61	Probable 26S proteasome complex subunit sem1 OS=Dictyostelium discoideum OX=4468...	[more]

BLAST of CmaCh12G006760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KMT1	2.6e-30	100.00	protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GHI9	5.4e-28	95.83	protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KGK6	4.6e-27	93.06	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KIG9	4.6e-27	93.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1	[more]
A0A1S3CMK4	4.6e-27	93.06	protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC10350262...	[more]

BLAST of CmaCh12G006760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002030.1	5.4e-30	100.00	protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita maxima] >XP_023002031.1 pro...	[more]
XP_022951372.1	1.1e-27	95.83	protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucurbita moschata] >XP_022951373.1 p...	[more]
KAG6599102.1	9.5e-27	93.06	Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022999790.1	9.5e-27	93.06	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]	[more]
XP_004144232.1	9.5e-27	93.06	protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED...	[more]

BLAST of CmaCh12G006760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45010.1	3.4e-22	73.97	DSS1 homolog on chromosome V	[more]
AT1G64750.1	5.7e-22	72.97	deletion of SUV3 suppressor 1(I)	[more]
AT1G64750.2	5.7e-22	72.97	deletion of SUV3 suppressor 1(I)	[more]
AT1G64750.3	6.1e-16	46.96	deletion of SUV3 suppressor 1(I)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007834	DSS1/SEM1	SMART	SM01385	DSS1_SEM1_2	coord: 9..67 e-value: 4.4E-19 score: 79.4
IPR007834	DSS1/SEM1	PFAM	PF05160	DSS1_SEM1	coord: 10..66 e-value: 1.7E-16 score: 60.1
IPR007834	DSS1/SEM1	PANTHER	PTHR16771	26 PROTEASOME COMPLEX SUBUNIT DSS1	coord: 1..72
None	No IPR available	PANTHER	PTHR16771:SF8	OS01G0316800 PROTEIN	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006760.1	CmaCh12G006760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex