CmaCh12G006270 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G006270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein of unknown function (DUF1639)
Location	Cma_Chr12: 3327823 .. 3329317 (-)
RNA-Seq Expression	CmaCh12G006270
Synteny	CmaCh12G006270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAACAATCAACAACAGCCGTCGGATCATTGATGGCAGATCTGGCTATCGTCCAAATAGCCTAGAAAATTCGAGATCCAATGGCTGAGAGGTCCCGGGAGAGTTGCCATTGAAAAAGACGGTTCTCTCCTTTAAAAGGAGCCCAGGCATAGAAGCTGCATCACTCACTTAAAAAGTCCTATCCAATTCAATCCCCCAAGGTCAATTCCGTAATTTCAGCCTCTTTTTTTTTTTTTTTTTTAATGAGATTTGTTTTATATTTTTTATATATTTTTAAAAATTGGATTTAGGAACTCTGATATTCCGGGTGCGATGAGAGGGAATACCAACGGCGGCGGCAGATCAATAAGCTCACCGGAGAAGAGAGCGGCGTGTAATCACGGCAACCACCACAAAAGCGGGGGAAGTGAATCAGAAACAAAGGAAGGAGGGTCATCGTCCGGCAGCGGAGAAGGGGGAGTGTGGCTGCCGGAGTTCGTAATAGCCTTAACGAATAAAGAGAAGGAAGAAGATTTCATGGCGATCAAAGGGTGTAAGCTGCCTCTCAGACCTAAAAAACGGCCCAAAATTATTCAACGCACCATCAATGTAAGCATACCTAACCCACCCCAGATTCTTACTTGCTTTTTAATTTTCATATTATTATTATTATTTATTATTAACGGTAATAAGTAAATAATTGAAATTAAATTATAATTTTGAGTGGCAATGGAAGGGTGTAAAACACGTGGAGAGCTTTGATTGGAGGGTACTAAGGGAAGGGTAGTTGTGTAATAAATATGAAGTTGAGGGTATTATTTAATGAGTTGATATATATTTGTATAAAAAAAATGGAGGCAGCTGGTGAGCCCAGGGACGTGGCTGTGTGATCTAACGCTGGACAGATACGAAGTCAGGGAAAAGATGTCTAAAAAGGTATTTATTTCTTTATTAAAAAAAAAAAAAAAACTATAAAATAAAATAAATAAATAAATATATATATATAATAATAGATATAATATCTAAAGAATATATTTAGTTACGGAATATATCTTTTACCTTATATCTAATATTCTTTACTTTATATTTATATTTATATTTAATTTATAGTATATGTTTTATTTTTAATATTTAATTAGTTTATATTTATATTTTCTTTGGGAATTTTATGAATATAAATATTCTCACTGTTCTAATTATATATTTTTGGAAGCAGAGACGAAGAGGGCTTAAAGCAATAGTGAAAGTGGAGTCAGATTCGGAGTGGGAAAGGCATAGTTCATGAATACCAACTTTTTCTATTGTAATTTTTAAATCTATTTAACTTTATTAAATGGTTAGTTTTAAAATATTAGAAATTTATTATTTTAAAAGTTTAAAAGGCATTTTAGGAGTGGACAGCTGGATGCATTTAGGCAGCTTTTATATTATTTTATTTTTGGCATTTGATGGACACCGTTCCTTTTTCTGTACTTTTTTTTTTAATATTTATATATTTACTTTCTTGTAATATGAC

mRNA sequence

TAGAACAATCAACAACAGCCGTCGGATCATTGATGGCAGATCTGGCTATCGTCCAAATAGCCTAGAAAATTCGAGATCCAATGGCTGAGAGGTCCCGGGAGAGTTGCCATTGAAAAAGACGGTTCTCTCCTTTAAAAGGAGCCCAGGCATAGAAGCTGCATCACTCACTTAAAAAGTCCTATCCAATTCAATCCCCCAAGGAACTCTGATATTCCGGGTGCGATGAGAGGGAATACCAACGGCGGCGGCAGATCAATAAGCTCACCGGAGAAGAGAGCGGCGTGTAATCACGGCAACCACCACAAAAGCGGGGGAAGTGAATCAGAAACAAAGGAAGGAGGGTCATCGTCCGGCAGCGGAGAAGGGGGAGTGTGGCTGCCGGAGTTCGTAATAGCCTTAACGAATAAAGAGAAGGAAGAAGATTTCATGGCGATCAAAGGGTGTAAGCTGCCTCTCAGACCTAAAAAACGGCCCAAAATTATTCAACGCACCATCAATCTGGTGAGCCCAGGGACGTGGCTGTGTGATCTAACGCTGGACAGATACGAAGTCAGGGAAAAGATGTCTAAAAAGAGACGAAGAGGGCTTAAAGCAATAGTGAAAGTGGAGTCAGATTCGGAGTGGGAAAGGCATAGTTCATGAATACCAACTTTTTCTATTGTAATTTTTAAATCTATTTAACTTTATTAAATGGTTAGTTTTAAAATATTAGAAATTTATTATTTTAAAAGTTTAAAAGGCATTTTAGGAGTGGACAGCTGGATGCATTTAGGCAGCTTTTATATTATTTTATTTTTGGCATTTGATGGACACCGTTCCTTTTTCTGTACTTTTTTTTTTAATATTTATATATTTACTTTCTTGTAATATGAC

Coding sequence (CDS)

ATGAGAGGGAATACCAACGGCGGCGGCAGATCAATAAGCTCACCGGAGAAGAGAGCGGCGTGTAATCACGGCAACCACCACAAAAGCGGGGGAAGTGAATCAGAAACAAAGGAAGGAGGGTCATCGTCCGGCAGCGGAGAAGGGGGAGTGTGGCTGCCGGAGTTCGTAATAGCCTTAACGAATAAAGAGAAGGAAGAAGATTTCATGGCGATCAAAGGGTGTAAGCTGCCTCTCAGACCTAAAAAACGGCCCAAAATTATTCAACGCACCATCAATCTGGTGAGCCCAGGGACGTGGCTGTGTGATCTAACGCTGGACAGATACGAAGTCAGGGAAAAGATGTCTAAAAAGAGACGAAGAGGGCTTAAAGCAATAGTGAAAGTGGAGTCAGATTCGGAGTGGGAAAGGCATAGTTCATGA

Protein sequence

MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRRGLKAIVKVESDSEWERHSS

Homology

[Close]

BLAST of CmaCh12G006270 vs. ExPASy TrEMBL
Match: A0A6J1KRJ7 (uncharacterized protein LOC111496571 OS=Cucurbita maxima OX=3661 GN=LOC111496571 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT 60
           MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT
Sbjct: 1   MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT 60

Query: 61  NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRR 120
           NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRR
Sbjct: 61  NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRR 120

Query: 121 GLKAIVKVESDSEWERHSS 140
           GLKAIVKVESDSEWERHSS
Sbjct: 121 GLKAIVKVESDSEWERHSS 139

[Close]

BLAST of CmaCh12G006270 vs. ExPASy TrEMBL
Match: A0A6J1GI70 (uncharacterized protein LOC111454377 OS=Cucurbita moschata OX=3662 GN=LOC111454377 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.5e-62
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MRGNTN--GGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIA 60
           MRGNTN  GGG SISSPEKRAACNHGNHHKS GSESE ++ GSSSG GEGGVWLPEFVIA
Sbjct: 1   MRGNTNGGGGGSSISSPEKRAACNHGNHHKSRGSESEREKEGSSSGGGEGGVWLPEFVIA 60

Query: 61  LTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE-KMSKK 120
           LTNKEKEEDFMAIKGCK PLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE KMSKK
Sbjct: 61  LTNKEKEEDFMAIKGCKPPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKKMSKK 120

Query: 121 RRRGLKAIVKVESDSEWERHS 139
           RRRGLKAIVK+ESDSEWERHS
Sbjct: 121 RRRGLKAIVKMESDSEWERHS 141

[Close]

BLAST of CmaCh12G006270 vs. ExPASy TrEMBL
Match: A0A6J1KC32 (uncharacterized protein LOC111492516 OS=Cucurbita maxima OX=3661 GN=LOC111492516 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.1e-40
Identity = 101/149 (67.79%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MRGNTNGGGRSISS-----PEKRAACNHGNH--HKSGGSESETKEGGSSSGSGEG----- 60
           M+G +NGG R+I+S     PEKR   NH NH  H    + S+TK+GGSSSGSGE      
Sbjct: 158 MKGQSNGGVRAITSPDRVAPEKRPPSNHDNHHPHHKSAATSDTKKGGSSSGSGEALAPPS 217

Query: 61  ---GVWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTL 120
                W P+FVIALTNKEKEEDFMAIKG KLP RPKKR K+IQRTINLVSPGTWLCDLTL
Sbjct: 218 QGQPAWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKLIQRTINLVSPGTWLCDLTL 277

Query: 121 DRYEVRE-KMSKKRRRGLKAIVKVESDSE 134
           +RYEVRE K+SKKR RGLKAIV +ESDSE
Sbjct: 278 ERYEVREKKISKKRPRGLKAIVNMESDSE 306

[Close]

BLAST of CmaCh12G006270 vs. ExPASy TrEMBL
Match: A0A6J1HEC4 (uncharacterized protein LOC111462716 OS=Cucurbita moschata OX=3662 GN=LOC111462716 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.3e-40
Identity = 101/149 (67.79%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 1   MRGNTNGGGRSISS-----PEKRAACNHGNH--HKSGGSESETKEGGSSSGSGEG----- 60
           M+G +NGG R+I+S     PEKR   NH NH  H    + S+TK GGSSSGSGE      
Sbjct: 157 MKGQSNGGVRAITSPDRVAPEKRPPSNHDNHHPHHKSAATSDTKRGGSSSGSGEALAPPS 216

Query: 61  ---GVWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTL 120
                W P+FVIALTNKEKEEDFMAIKG KLP RPKKR K+IQRTINLVSPGTWLCDLTL
Sbjct: 217 QGQPAWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKLIQRTINLVSPGTWLCDLTL 276

Query: 121 DRYEVRE-KMSKKRRRGLKAIVKVESDSE 134
           +RYEVRE K+SKKR RGLKAIV +ESDSE
Sbjct: 277 ERYEVREKKISKKRPRGLKAIVNMESDSE 305

[Close]

BLAST of CmaCh12G006270 vs. ExPASy TrEMBL
Match: A0A1S4DWI1 (uncharacterized protein LOC103487794 OS=Cucumis melo OX=3656 GN=LOC103487794 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-39
Identity = 102/146 (69.86%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 1   MRGNTNGGGRSISS-----PEKRAACNHGNHHKSGGSESETKEGGSSSGSGEG------- 60
           MR  +NGG R+I+S     PEKR   +H +H+KS  + S+TK+GGSSSGSGE        
Sbjct: 155 MRAQSNGGVRAITSPDRAVPEKRPPPSHDHHYKSAAT-SDTKKGGSSSGSGEPTVPPQAL 214

Query: 61  GVWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRY 120
            VW P+FVIALTNKEKEEDFMAIKG KLP RPKKR KIIQRTINLVSPGTWLCDLTL+RY
Sbjct: 215 PVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKIIQRTINLVSPGTWLCDLTLERY 274

Query: 121 EVRE-KMSKKRRRGLKAIVKVESDSE 134
           EVRE K+SKKR RGLKAIV +ESDSE
Sbjct: 275 EVREKKISKKRPRGLKAIVNMESDSE 299

[Close]

BLAST of CmaCh12G006270 vs. NCBI nr
Match: XP_023002824.1 (uncharacterized protein LOC111496571 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT 60
           MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT
Sbjct: 1   MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT 60

Query: 61  NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRR 120
           NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRR
Sbjct: 61  NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKMSKKRRR 120

Query: 121 GLKAIVKVESDSEWERHSS 140
           GLKAIVKVESDSEWERHSS
Sbjct: 121 GLKAIVKVESDSEWERHSS 139

[Close]

BLAST of CmaCh12G006270 vs. NCBI nr
Match: XP_022951617.1 (uncharacterized protein LOC111454377 [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 1.3e-61
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MRGNTN--GGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIA 60
           MRGNTN  GGG SISSPEKRAACNHGNHHKS GSESE ++ GSSSG GEGGVWLPEFVIA
Sbjct: 1   MRGNTNGGGGGSSISSPEKRAACNHGNHHKSRGSESEREKEGSSSGGGEGGVWLPEFVIA 60

Query: 61  LTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE-KMSKK 120
           LTNKEKEEDFMAIKGCK PLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE KMSKK
Sbjct: 61  LTNKEKEEDFMAIKGCKPPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKKMSKK 120

Query: 121 RRRGLKAIVKVESDSEWERHS 139
           RRRGLKAIVK+ESDSEWERHS
Sbjct: 121 RRRGLKAIVKMESDSEWERHS 141

[Close]

BLAST of CmaCh12G006270 vs. NCBI nr
Match: KAG7020641.1 (hypothetical protein SDJN02_17327, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MRGNTN--GGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIA 60
           MRGNTN  GGGRSISSPEKRAACNHGN HKS GSESE ++ GSSSG GEGGVWLPEFVIA
Sbjct: 1   MRGNTNGGGGGRSISSPEKRAACNHGNQHKSRGSESEKEKEGSSSGGGEGGVWLPEFVIA 60

Query: 61  LTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE-KMSKK 120
           LTNKEKEEDFMAIKGCK PLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE KMSKK
Sbjct: 61  LTNKEKEEDFMAIKGCKPPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKKMSKK 120

Query: 121 RRRGLKAIVKVESDSEWERHS 139
           RRRGLKAIVK+ESDSEWERHS
Sbjct: 121 RRRGLKAIVKMESDSEWERHS 141

[Close]

BLAST of CmaCh12G006270 vs. NCBI nr
Match: KAG6585733.1 (hypothetical protein SDJN03_18466, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.4 bits (625), Expect = 3.0e-61
Identity = 129/142 (90.85%), Postives = 132/142 (92.96%), Query Frame = 0


Query: 1   MRGNTN---GGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVI 60
           MRGNTN   GGGRSISSPEKRAACNHGN HKS GSESE ++ GSSSG GEGGVWLPEFVI
Sbjct: 1   MRGNTNGGGGGGRSISSPEKRAACNHGNQHKSRGSESEKEKEGSSSGGGEGGVWLPEFVI 60

Query: 61  ALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE-KMSK 120
           ALTNKEKEEDFMAIKGCK PLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE KMSK
Sbjct: 61  ALTNKEKEEDFMAIKGCKPPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKKMSK 120

Query: 121 KRRRGLKAIVKVESDSEWERHS 139
           KRRRGLKAIVK+ESDSEWERHS
Sbjct: 121 KRRRGLKAIVKMESDSEWERHS 142

[Close]

BLAST of CmaCh12G006270 vs. NCBI nr
Match: XP_023537899.1 (uncharacterized protein LOC111798796, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 8.1e-59
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MRGNTNGGGRSISSPEKRAACNHGNHHKSGGSESETKEGGSSSGSGEGGVWLPEFVIALT 60
           MRGNTNGGGRSISSPEKRAACNHGNHHKS GSESE ++ GSSSG GEGGVWLPEFVIALT
Sbjct: 1   MRGNTNGGGRSISSPEKRAACNHGNHHKSRGSESEREKEGSSSGGGEGGVWLPEFVIALT 60

Query: 61  NKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE-KMSKKRR 120
           NKEKEEDFMAIKGCK PLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVRE KMSKKRR
Sbjct: 61  NKEKEEDFMAIKGCKPPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYEVREKKMSKKRR 120

Query: 121 RGLKAIVKVESD 132
           RGLKAIVK+E+D
Sbjct: 121 RGLKAIVKMETD 132

[Close]

BLAST of CmaCh12G006270 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 50  VWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYE 109
           VW P+  IAL+NKEKEEDF+A+KGCKLP RPKKR K++Q+T+ LVSPG WL DL  +RYE
Sbjct: 122 VW-PKLYIALSNKEKEEDFLAMKGCKLPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYE 181

Query: 110 VRE-KMSKKRRRGLKAIVKVESDSE 134
           VRE K SKKR RGLKA+  +ESDSE
Sbjct: 182 VREKKTSKKRPRGLKAMGSMESDSE 205

[Close]

BLAST of CmaCh12G006270 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 50  VWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDLTLDRYE 109
           VW P+  IAL+NKEKEEDF+A+KGCKLP RPKKR K++Q+T+ LVSPG WL DL  +RYE
Sbjct: 112 VW-PKLYIALSNKEKEEDFLAMKGCKLPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYE 171

Query: 110 VRE-KMSKKRRRGLKAIVKVESDSE 134
           VRE K SKKR RGLKA+  +ESDSE
Sbjct: 172 VREKKTSKKRPRGLKAMGSMESDSE 195

[Close]

BLAST of CmaCh12G006270 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 40  GSSSGSGEGGVWLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTW 99
           G  S + E  +W P+  I L+NKEKEEDFMA+KGCK   RPKKR K+IQR++ LVSPGTW
Sbjct: 99  GEDSNNKEESMW-PKLFITLSNKEKEEDFMAMKGCKPSHRPKKRAKLIQRSLLLVSPGTW 158

Query: 100 LCDLTLDRYEVR-EKMSKKRR-RGLKAIVKVESDSE 134
           L DL  DRY+VR +K SKKRR RGLKA+  +E+DS+
Sbjct: 159 LADLCPDRYDVRVKKSSKKRRARGLKAMGNMETDSD 193

[Close]

BLAST of CmaCh12G006270 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) )

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-15
Identity = 59/153 (38.56%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 1   MRGNTNGGGRSISSP---EKRAAC----NHGNHHKSGGSESETKEGGSSSGSGEGGV--- 60
           M   + G  RS  SP   EKR++      +G  H+    +   +   ++ G  E  +   
Sbjct: 201 MISRSGGSKRSPPSPDQIEKRSSVRDQRQNGFDHQQQQHQRVNRSESTAQGHQEVEINGE 260

Query: 61  -------WLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDL 120
                  W P   IAL+ KEKEEDF+ +KG KLP RP+KR K I + +    PG WL DL
Sbjct: 261 REKATQEW-PRIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKALQFCFPGMWLSDL 320

Query: 121 TLDRYEVREKMSKK---RRRGLKAIVKVESDSE 134
           T +RYEVREK + K   +RRGLK +  +++DSE
Sbjct: 321 TKNRYEVREKKNVKKQQKRRGLKGMENMDTDSE 352

[Close]

BLAST of CmaCh12G006270 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) )

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 51/135 (37.78%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MRGNTNGGGRSISSP---EKRAAC----NHGNHHKSGGSESETKEGGSSSGSGEGGV--- 60
           M   + G  RS  SP   EKR++      +G  H+    +   +   ++ G  E  +   
Sbjct: 201 MISRSGGSKRSPPSPDQIEKRSSVRDQRQNGFDHQQQQHQRVNRSESTAQGHQEVEINGE 260

Query: 61  -------WLPEFVIALTNKEKEEDFMAIKGCKLPLRPKKRPKIIQRTINLVSPGTWLCDL 119
                  W P   IAL+ KEKEEDF+ +KG KLP RP+KR K I + +    PG WL DL
Sbjct: 261 REKATQEW-PRIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKALQFCFPGMWLSDL 320

The following BLAST results are available for this feature:

BLAST of CmaCh12G006270 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh12G006270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRJ7	5.8e-71	100.00	uncharacterized protein LOC111496571 OS=Cucurbita maxima OX=3661 GN=LOC111496571...	[more]
A0A6J1GI70	6.5e-62	91.49	uncharacterized protein LOC111454377 OS=Cucurbita moschata OX=3662 GN=LOC1114543...	[more]
A0A6J1KC32	4.1e-40	67.79	uncharacterized protein LOC111492516 OS=Cucurbita maxima OX=3661 GN=LOC111492516...	[more]
A0A6J1HEC4	5.3e-40	67.79	uncharacterized protein LOC111462716 OS=Cucurbita moschata OX=3662 GN=LOC1114627...	[more]
A0A1S4DWI1	1.2e-39	69.86	uncharacterized protein LOC103487794 OS=Cucumis melo OX=3656 GN=LOC103487794 PE=...	[more]

BLAST of CmaCh12G006270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002824.1	1.2e-70	100.00	uncharacterized protein LOC111496571 [Cucurbita maxima]	[more]
XP_022951617.1	1.3e-61	91.49	uncharacterized protein LOC111454377 [Cucurbita moschata]	[more]
KAG7020641.1	2.3e-61	91.49	hypothetical protein SDJN02_17327, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6585733.1	3.0e-61	90.85	hypothetical protein SDJN03_18466, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023537899.1	8.1e-59	92.42	uncharacterized protein LOC111798796, partial [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh12G006270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55340.1	1.9e-26	69.41	Protein of unknown function (DUF1639)	[more]
AT1G55340.2	1.9e-26	69.41	Protein of unknown function (DUF1639)	[more]
AT3G03880.1	1.5e-23	61.46	Protein of unknown function (DUF1639)	[more]
AT4G20300.2	2.0e-15	38.56	Protein of unknown function (DUF1639)	[more]
AT4G20300.1	2.1e-12	37.78	Protein of unknown function (DUF1639)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012438	Protein of unknown function DUF1639	PFAM	PF07797	DUF1639	coord: 59..108 e-value: 1.5E-23 score: 82.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR33130	PUTATIVE (DUF1639)-RELATED	coord: 3..133
None	No IPR available	PANTHER	PTHR33130:SF45	INTEGRATOR COMPLEX SUBUNIT 6 HOMOLOG	coord: 3..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006270.1	CmaCh12G006270.1	mRNA