CmaCh12G006240 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G006240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr12: 3298362 .. 3305272 (-)
RNA-Seq ExpressionCmaCh12G006240
SyntenyCmaCh12G006240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGTAAAACAAAATCAAAATATGAATATGGAAGCAAAGGTAAACAACAAAGAAATAGTAGAAAAGGTAATTCAAATTAACGATTCGCATGTTTTGATCAATCAATAATCGTTGAATTACTATACTGTTTTTCTTTCTTTCGAATCGTACTACATAAATTTATCGGTTTTTCATTTTGATAGCTGTCTAGCTTCGTTCTTGAACAGTTTGTTGTCTATATATTGAACTTGAACTTTTTCGTAAAATAATCAGAATTAGGGAATTGAAGCTATCTTTATTCTTTTTCTTTCCCCATATTTTAGGTTAATAAAAGAAAATAATTGAACGGCACCATTTTCAACCTTGCTTTCGAGAACGCATCGTCAAGCTGTTCTCGAGTAAAATGATCATTCCCCGGGCATTCAAGTTTAAATTTCACATAAGATTTGAATGAACTTCAACAAGGGGCAGGGAACCAGACCTCAATGATAGAATACAGAAATTTAGACAATGAAATGAAAAACTAATGTATTCTCGATCTTACGAACATGTAATTAGACGAACATGTAATTAGACGTATGAAGGAACGATATATACATTTACACCATTTATAGCATCACAATCATTTATGGGTAATGTATTGCAATAACCTTCTGTCCATATTTTCGGAGTCAAATTGCTCAAGTCTTACTTCGGCAACATATTAAATAAAGAACAAACTATTCCTTCATTCACAGTAAGATATAGAACCACAAGAAACGCAGCAACCAAAACACTATTCCTTCATTCACAGTAAGATATAGGACCACAAGAAACGCAGCAACCATGTTATATTATTCAAGGCATTTCCTCGAATCAAATAATATGTGGCGTCTCCACAAAAGTGACCAAAACGCTCGAGGTTTTCCCACAAACTCTTCGCAGATTGACAGGAAGAAAAAGGAGGTACAGGTGAAAGAACAGATTACTTCTGGAAAGCGCCAAATTGGTATTGCTGACCCGAAAGTTGCGAAAAGAAATCATCTCCCATCGCCTGCGATCCCGTCCGACCAAGACCAGATCCTGCACCCATTGCTTGCCCCATGTGATAAGTAGGTGCTGGTCCTTTCACCAGCTCATCTGAGAAATCGCTCAGTCCACCCATAACACCGACGTCTACCAGGGAAACCTTCTTGGCTGCAATGCAGACAAGAAAATGATGGGTTAAGGGAGCTATTGAAAGATGAAACAACCCAAAAGTGCCTTCAGAGAGTCAATGAAGTGATGATGAGGATATAATATTTTAAGAACAAATAAGATGATATTGATTCTACCACAACGTAATATGCTCAATCAAGCACCAATCCTGCACATTTCTATTTCAGAGGTCCATCTTATTAGGCACCAACCCTATTAAAATTCTGAAGATGGTATACTTTCTATTCCAGAATAGTGTCTACGAAATGTCTCTTAACTAGTTCAAGAAGGGAAAAAGAGAGAAATGAAAAAAGAAAGGCCAGTAAAAAGGATTGAGGCAGTCAAGATAGACTTACGAGCCGAGATATTAAGATCAATCAGTCCTCGACTTAGTGAATCTGCCCAAATCCCAGATTTGACCTGAAAAGTATTCTTCTTGGCTGGAGCTGATGAACTTTTGATAGATTTTCCATCTGGATTATTAGATGGGCAACTAACAGGATTTTGCGAAGGCTCTACTGATGACACTGGTTCAGAATGGGAAGAGGGTGCACCGAAAAGATCTGACCCATCAAAAGAGTTAAGTGGAAGAGCAGCAAAAGGATCCACAACTTTACTGTTTGTTGCTGCGCTAGCAATGGTTTCTGTTTGCAAAACGGGCCCTGGAGAGGCAAAAATGTCAATTGGTGCAGAAACAGAAGCAGGTTTTGAAGCTTTTATGTCTCTTGCTGCACCAGCAAAGTTCGTTTCTGTTTGGACAATCGGCTCAGAAGAGGCAAAAAAGTCGAATGTTGCAGAAAGTGACGCAGGTTGTGAAGCTTTACTGTCTCTTGCTGCACCGGCAAAGTTGGTGCCTGTTTGCACAACCGGCTCAGGAGAGCCAAAAAAGTCAACTGGTGTAGAAACTGAAGCAGGTTGAGAAGCGAATAGATCAACCTCAGCCTGGATAAAAGGTAAGAAATTTATTTTTAAAGAAAAGCGAAGGAAAAAAAAAAAAAAAAAAAAAAACTAAACATCAGAAAGAGGCACTTATAACTCCACACACTTTCATGAATATAATATTTTGTTGAGATAATGAGTAGAAGCAAAGAGACCAAATCATTGTTAGAGCATCAAAATGGCCGTTGATAGATAAAAATACAAATAAGTAGTAATAGAGGAGGCTAAGCAAAACTGATAAGAGAAATACATGTTTTTTCAGTCATTATTCAATTATTCATAAAGAAATACATACGAAGACAGCTCAAACAAAGTCTAGTTTGTGCGAAATGAGAATTTCTAGTAGATTAGCTTTCAATCACATATGTGAGAATGTCCTTGATGACCAAAATGCAAGTGCATCGAAGATGCATGACTTACCTCAAGCTAAATGCAATACTATTCTTGAATCAAAAGGTAAATCTCTAACTTGGCTAAATGCAAGACAGTGATTGCAGTAAACAAAATACAGGAGCAAGTATTAATTGGGGAATTTAATGAAACCACTAAAAATACTAGTATCCAGAACCTTTAGCGAGGAATTGGGTTCCTTTTCCATTGGCGGTGAAGCTGATACAAAAGTAGCATCTGCAAACAGATCTACCTCCGGAGAATTGCTGTCAGGCTTTCCAGGAGGAACAAGTGTTGGAGCATCCATGAGATCTCCAATTAAACTATCTTCAAAAAGATCCACTCCATTGGGGCTTGGTACAGCAGCTTCTGGCAAAAAGTTAATTCAGAATGGGAGAACTGTTGGAAAATAAATACATGCTATATATAATTTAGTAATGTGGTCACCCATTGTTTCTTCCTTCTCCCTGTATTCAGTCAATAATAAATCACATCCGTGTGTGTGTTGCTACTTTAATTTGAAAAGAGCAGTGTTCCATAACGGAGAATAAGGAGACACTATTGCAGAAGACCTTCAAGCCAAAAGACGCGTGCGGGACTTCATTTTAATACCAATGCTCATAGCATGCAACGCTGCCTTTTAGTGAGTTGGCTTTATTTTGAGTGTGGGTTTGAAGGCTTTTATTTCTTTGTCTAATCCTAGGCAAATATCATTGAGGTGGTTAGAAGTCAAGGAAACCATTGTCGTGGTTTCTTGATGTTGATTGTTAGCCTGAGTTTGAAGGTCATTTGTATATTCCATTATAGTAGAACTAGCAAGACTGGATGCAGTCTTGAGTTTGGGGCGACTGGTACACTTTCAGTGTTGTGTTCTCTTTTGTTATCCCTCTACTTTGTGTTGTTATTTACTAACTTTGGTCACATGGAAGGGGAGTATAGTATTTCAGTCCTATTGGATTACTCTCAATTATAGAGGTCTTAGTACTCTTTCTCCCAACAACAATCACTCTCAAACTTTCTCCCCACTAGTTTTTGTAATTGTGACTTGTGGTTGGTCAAAGTTTTAAATCCAATATATAATAGAGTAAGGGCATGTTTAGTCAATAGTTTAAGTAAAGTTTTGGTTTGTGAAGATTGAGTTGGAAATCTGGTCTAGTGTAATTTGTACTCGGATTGTCAAGAGAAATGGGCAGCATAAACCGAAGTTCACACAAAAAACTTTGTAGTCTGGTGCGTAACTTGTGTTGTGTATTTCATGGGATTAGAAAGATTGAAGCTCGGAAAGACCGATAAAGTAAGCCCAGGTACTAAATGTAGGTTTGGTTTTTCAAACCTAGACTATACAAACTCACCCCCATGGGATAAACACTACCTAAAACCAACGTCAGAACTGTGAGGAAGAAGATAGTGATTTTATTCATATTTCACCTATTAGTTTTAATCAACTTCTTGCACCTTTTCTGATCCAATGTAACTTACAAGTAGTCTTATACCAAAATTACCAAAATATACACAAATTGAAGGAAATGAGGAAGACATTCGTAAAACACGATGTCAAACCCTTAGCACCTCTTTTACAACCTCTAGTTTACTCATTAGTTTCAAAATAACATTATTTTACTAATTAGCTTTCCTTTGGAAGTATAAAAAACTAAAAATTATTTGATACTCATTTAATACAACAAAACAATGGTAATCAATAAACATAATGGAAGGAATGTCATGGAAAATTTGAGAGAAATAACCGTTGTAATTGAATTATTAAGAATAAATAAATAAAACCAATCAAAGTAGAAAAAAAATCACATTTATAGTCCTATTTGTATATAGTATAGAATGTCCATCCACTGGCAAATGACCACTAAGCATTTAAGCTACAAAAGTAAACCACGTTCAAAATTAACACACCAATTATCTTATTGCAATAAAACAAGCATAAACATTTCAAAATTCAAAACACTTACTTGTGGTGGTGGTGGTGGAATTCCCACGAGGATCAAAATCATCAAAATCTTCGTCAGAACTATTTGTTTGGGGACTAGAGCTGAAGGAGACACCCTTATTTGCAGAGTCATTTGACTTTTTTGAGAACTTCGATGTTCCCGATGATGTTTTACTTTGATCCTTGCTGAAAGAGAATTCTCCGTATTAGGAAGCAAGACAATATAGAAATATAGAGGCAATGCCTGTCTGTTTATATATGAGACGCAATAATTTAAGACCAAACAACATGAAACTTCACAATGAATTCTCCAAAATTTAAAAACTCCAACCATAGACGCAATAACTTCTGATCAACTTCTCATTTTAAAAAGATTATCCACTGACACTTCTCCAGTAATATAATTCTGCAATAGATCACAGAGTCCAAACGAAACCTAGCAAAAGAACCATGGCTCAAAGGAACAGAGGTGTTGTTTGTTTGCAGAACCTACTCCAAGAATGTACCATCGTATTCAGCAAATAGAATCAAGTAAAAAGGTAAATATTCTACAAGTACATACCTGCTGTCTTGTGCAGAACCCTTGCTATAATCCTGCTTAGTAGACCAATTTGACCTTTTAAAGTCATCCTGATCTTCTTTTTCCTTCCTAAATGAATCCCTGCCGCTGCTCCTATCACGAAATCTATCGCTTCTAAAGCTACTCTGACCTTGATAACTATCACTGCTAAAGCTACTGCTGCCATACGAGGCTGAGCCTGACTTGTAAGTAATCCCAGTAGATGAAAGTCCAAAGTACCTAAGAATGGACATGTACATTAGTTATTTTGAAAAATAAATTTGCATGGTGACTGAGGTCCCAGCGAACTTTTAAATCATCAATCAACCAAAAAGCTAAGTTGATGATTACAATAAATTTAATTATATCAATACTTGGAAACTCTCACTAACTTGAAAGCTTGAAAATTTGTAAAAGACATCCCAAGAGGAAATCAATATTAATTTGACAGAAAATGACATTATAAGGTTTGAATACAGAACCTCTTGCTTTGTTACATGTTAAATCATCAAACAATCCAAAAGATTAAGTTGACGGGTTATAATAAATGTAATTATTTCTACTTTTTTTTATAAGATTAATATTTTATTTCATGTCAATACTTCTAACATTAACCAAAATGATGAGAATTTGGTATTGAAACAAGAAGAATTTGCATAAATAAACTCCTAGGCTTACTGTATCTCTTGTTCAATTGCCTACATCCACTAATTTAGTGTAGATGAAAGTAATTATAAGGAGAGATAGCACACGAAATTCAGTCCTTGCAAAATATAGATGAAAGTCGATAATGGCTACACTTTATCTTCATTTGGCTGATATGAGCATTCAAACATATTTAATATAACTGATCTCGCAGCAGAGATTAAAGCCCAAGCAAACTGGTATAGTCTGATGCTATAATTATGGGAATTGTTAATGTTATTTATTTACTACATGGTCAGAGGTTTTACCCTCCACCCCCTTTTATTATTTTAACCAAGGATCAATTAGTGTGAGGAGAAGCTCATAAATATAACTGTCTATTCGTAGGTAGTCAATCTAAAGAAAGAAAATAGAATCAGATTCCTTAAATATTCACTTACTTTTCACGATTTGCAGCAGCTTTATTTCTCACTTCTTGTATTTTATCTTTATCATTCAAAAGGGCGACAATATTTTCAGCCTTCTTCCTGACATTTATCCCCATGTCCTTGCCACTTGGCTCAACATATTCAAAATTCGAGAGTGACTATCCAACAAAAATAAAACACAAAAAAAAAAAAAAATAATAAGACAGTCTCTAAAGAGCTGAACTGCACTGTAAAGCAAATTTTCAAAACATTCTTACAGATATCTGGAAAGTATGTTCAATAATGTCATCCACTGCACGTTCAGATCCATGCGACACCAAATATTCTATTACAGCCAAAGCCTAAAGAAGTTGACAGTGCCGTTCATAAGCAAGAGTGATATTATTTGTCAGGTAATAAGATCATATTCAACTGGGAACAAATAAAACTTTACCTTATAGACAAGACGCCAATTCTTACCAGTTTCACTCAATCTTGTCCAGAGAACACTCATAACCATCTGAGTTTCAGAACTGAACAATTAAAATCAACCGTGAAGCAAAAATCAGTGCTTGATTGAAGAAGGAAAGAGCGGTATGGAATGAAAAGAGTTGTAACTTTACAATTTCTTTGTAGCTTGCGCTATTTCTGCCAGTGCGGATCCATGAGGACCCCATGGTTCATCATCTGTTGCATCCAGCACCTGTAGCAGTGATGACAACCAGTTATGAAATCACATTGAGAAGTTCAATCCTCCAACAATACAATATTAAATACTTCATTAGAGGTGGGTCTGCTCTGAAACTTAATCCATTGTATCTGAAAAGGCAAGTCCCTGAGGGCCATCCGGAACATGACCGATCAAATTGA

mRNA sequence

ATGAAAGGTAAAACAAAATCAAAATATGAATATGGAAGCAAAGACGAACATATTGACAGGAAGAAAAAGGAGGTACAGGTGAAAGAACAGATTACTTCTGGAAAGCGCCAAATTGGTATTGCTGACCCGAAAGTTGCGAAAAGAAATCATCTCCCATCGCCTGCGATCCCGTCCGACCAAGACCAGATCCTGCACCCATTGCTTGCCCCATATTTTCCATCTGGATTATTAGATGGGCAACTAACAGGATTTTGCGAAGGCTCTACTGATGACACTGGTTCAGAATGGGAAGAGGGTGCACCGAAAAGATCTGACCCATCAAAAGAGTTAAGTGGAAGAGCAGCAAAAGGATCCACAACTTTACTGTTTGTTGCTGCGCTAGCAATGGTTTCTGTTTGCAAAACGGGCCCTGGAGAGGCAAAAATGTCAATTGGTGCAGAAACAGAAGCAGGTTTTGAAGCTTTTATGTCTCTTGCTGCACCAGCAAAGTTCGTTTCTGTTTGGACAATCGGCTCAGAAGAGGCAAAAAAGTCGAATGTTGCAGAAAGTGACGCAGGTTGTGAAGCTTTACTGTCTCTTGCTGCACCGGCAAAATCAACCTCAGCCTGGATAAAAGTATCCAGAACCTTTAGCGAGGAATTGGGTTCCTTTTCCATTGGCGGTGAAGCTGATACAAAAGTAGCATCTGCAAACAGATCTACCTCCGGAGAATTGCTGTCAGGCTTTCCAGGAGGAACAAGTGTTGGAGCATCCATGAGATCTCCAATTAAACTATCTTCAAAAAGATCCACTCCATTGGGGCTTGGTACAGCAGCTTCTGGCAAAAAAAGACCTTCAAGCCAAAAGACGCGTGCGGGACTTCATTTTAATACCAATGCTCATAGCATGCAACGCTGCCTTTTAGCAAATATCATTGAGGTGGTTAGAAGTCAAGGAAACCATTGTCGTGGTTTCTTGATGTTGATTGTTAGCCTGAGTTTGAAGGTCATTTGTATATTCCATTATAGTAGAACTAGCAAGACTGGATGCAGTCTTGAGTTTGGGGCGACTGGTCTTAGTACTCTTTCTCCCAACAACAATCACTCTCAAACTTTCTCCCCACTAGTTTTTGTAATTGTGACTTGTGTCTGGTGCGTAACTTGTGTTGTGTATTTCATGGGATTAGAAAGATTGAAGCTCGGAAAGACCGATAAAAGGTTTTACCCTCCACCCCCTTTTATTATTTTAACCAAGGATCAATTAGTATATCTGGAAAGTATGTTCAATAATGTCATCCACTGCACGTTCAGATCCATGCGACACCAAATATTCTATTACAGCCAAAGCCTAAAGAAGTTGACAGTGCCGTTCATAAGCAAGAGTGATATTATTTGTCAGTGCTTGATTGAAGAAGGAAAGAGCGTGCGGATCCATGAGGACCCCATGGTTCATCATCTGTTGCATCCAGCACCTGTAGCAGTGATGACAACCAGTTATGAAATCACATTGAGAAGTTCAATCCTCCAACAATACAATATTAAATACTTCATTAGAGGTGGGTCTGCTCTGAAACTTAATCCATTGTATCTGAAAAGGCAAGTCCCTGAGGGCCATCCGGAACATGACCGATCAAATTGA

Coding sequence (CDS)

ATGAAAGGTAAAACAAAATCAAAATATGAATATGGAAGCAAAGACGAACATATTGACAGGAAGAAAAAGGAGGTACAGGTGAAAGAACAGATTACTTCTGGAAAGCGCCAAATTGGTATTGCTGACCCGAAAGTTGCGAAAAGAAATCATCTCCCATCGCCTGCGATCCCGTCCGACCAAGACCAGATCCTGCACCCATTGCTTGCCCCATATTTTCCATCTGGATTATTAGATGGGCAACTAACAGGATTTTGCGAAGGCTCTACTGATGACACTGGTTCAGAATGGGAAGAGGGTGCACCGAAAAGATCTGACCCATCAAAAGAGTTAAGTGGAAGAGCAGCAAAAGGATCCACAACTTTACTGTTTGTTGCTGCGCTAGCAATGGTTTCTGTTTGCAAAACGGGCCCTGGAGAGGCAAAAATGTCAATTGGTGCAGAAACAGAAGCAGGTTTTGAAGCTTTTATGTCTCTTGCTGCACCAGCAAAGTTCGTTTCTGTTTGGACAATCGGCTCAGAAGAGGCAAAAAAGTCGAATGTTGCAGAAAGTGACGCAGGTTGTGAAGCTTTACTGTCTCTTGCTGCACCGGCAAAATCAACCTCAGCCTGGATAAAAGTATCCAGAACCTTTAGCGAGGAATTGGGTTCCTTTTCCATTGGCGGTGAAGCTGATACAAAAGTAGCATCTGCAAACAGATCTACCTCCGGAGAATTGCTGTCAGGCTTTCCAGGAGGAACAAGTGTTGGAGCATCCATGAGATCTCCAATTAAACTATCTTCAAAAAGATCCACTCCATTGGGGCTTGGTACAGCAGCTTCTGGCAAAAAAAGACCTTCAAGCCAAAAGACGCGTGCGGGACTTCATTTTAATACCAATGCTCATAGCATGCAACGCTGCCTTTTAGCAAATATCATTGAGGTGGTTAGAAGTCAAGGAAACCATTGTCGTGGTTTCTTGATGTTGATTGTTAGCCTGAGTTTGAAGGTCATTTGTATATTCCATTATAGTAGAACTAGCAAGACTGGATGCAGTCTTGAGTTTGGGGCGACTGGTCTTAGTACTCTTTCTCCCAACAACAATCACTCTCAAACTTTCTCCCCACTAGTTTTTGTAATTGTGACTTGTGTCTGGTGCGTAACTTGTGTTGTGTATTTCATGGGATTAGAAAGATTGAAGCTCGGAAAGACCGATAAAAGGTTTTACCCTCCACCCCCTTTTATTATTTTAACCAAGGATCAATTAGTATATCTGGAAAGTATGTTCAATAATGTCATCCACTGCACGTTCAGATCCATGCGACACCAAATATTCTATTACAGCCAAAGCCTAAAGAAGTTGACAGTGCCGTTCATAAGCAAGAGTGATATTATTTGTCAGTGCTTGATTGAAGAAGGAAAGAGCGTGCGGATCCATGAGGACCCCATGGTTCATCATCTGTTGCATCCAGCACCTGTAGCAGTGATGACAACCAGTTATGAAATCACATTGAGAAGTTCAATCCTCCAACAATACAATATTAAATACTTCATTAGAGGTGGGTCTGCTCTGAAACTTAATCCATTGTATCTGAAAAGGCAAGTCCCTGAGGGCCATCCGGAACATGACCGATCAAATTGA

Protein sequence

MKGKTKSKYEYGSKDEHIDRKKKEVQVKEQITSGKRQIGIADPKVAKRNHLPSPAIPSDQDQILHPLLAPYFPSGLLDGQLTGFCEGSTDDTGSEWEEGAPKRSDPSKELSGRAAKGSTTLLFVAALAMVSVCKTGPGEAKMSIGAETEAGFEAFMSLAAPAKFVSVWTIGSEEAKKSNVAESDAGCEALLSLAAPAKSTSAWIKVSRTFSEELGSFSIGGEADTKVASANRSTSGELLSGFPGGTSVGASMRSPIKLSSKRSTPLGLGTAASGKKRPSSQKTRAGLHFNTNAHSMQRCLLANIIEVVRSQGNHCRGFLMLIVSLSLKVICIFHYSRTSKTGCSLEFGATGLSTLSPNNNHSQTFSPLVFVIVTCVWCVTCVVYFMGLERLKLGKTDKRFYPPPPFIILTKDQLVYLESMFNNVIHCTFRSMRHQIFYYSQSLKKLTVPFISKSDIICQCLIEEGKSVRIHEDPMVHHLLHPAPVAVMTTSYEITLRSSILQQYNIKYFIRGGSALKLNPLYLKRQVPEGHPEHDRSN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G006240.1CmaCh12G006240.1mRNA