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CmaCh12G006170 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAGGGAAATTAATTCTCACCTTTCATTTCTCAATTCGTTCATCTTCGTCTTCTGCTTTGAATTTGCCCTAAACCCTTCTGAATTCTCAGAGAAAGCCATTAATTAGTAGCACAAGCGAATTGAGAGGAGACGAGGGTTTGTTCCTCAAGGCGGTGCGGGGAAGGGAGAAGAGCGGAATTGAGAAGACGAGGAGGGGAGAAGGAATCCCTAAACCATGCTTTTAGGGTTTCGAATTTCACCGACATCTGCTATTAGAATCAGCTGAACGCGACTTTCAACATTCAGAGGAGATGAGTGACGACAATGGCAAATCGGATAAGGATAATCAATGGCAATCGCCAAGAGCACCGCATCAACAGAAAGAGGAGGAGGATACGAAACTCTGGGGAGTTCTTCTCTTCGGTTTGATCGGTGCCTCTGCCACCACTCTTGCCGTGAGTTCTTTTTCTCAATCTTCGTTGTTTAGCCTAGCTACTGGTGATTTAATTTTAATTCTCTTCGTTCTTGCCATGGAATTTTAAGCTTTGAGCGATTGTTTGAAAACAGAATTTGGAATAGTGATAGGCAATGTGAATCTCGATATGTAATGAAACGCGTTATTCTAATTTCATCAGTATTTGCTATTGAAATGATCATGACTGTTATCAACTGACACAATAATTCCTCCTCATTAATAACGAAGGATAAGGAATTATCTGAATCTGTATAGTTGAGTATATTTGTAGTGATAAAATAATTTTCTGGTATATTTGGAAACTAATTCCATTGACTAGTTTTTCTCCTTGGAGTTGGTGCTTAATTTGACATTGGTTGTTCTTGGGCAGGTTAGTCATCTGCGGAGAACTGTTGATTGGGTATACACTCAGGTATATGCGTTAGTACATTAATGATGCTATCTAATATTTGTTAAAACTCGTTCTTAGATCAACTGCTGCAATGTGAGGGAGAAATGGTTGATTTTGCATTTTTCACTGCTTTTAAGGCATATTTGGCATGGCTCCTATAATCATTTAAGTTAGAAACAAAGAACTTGCACAAAAGAACTGGAAAGAAAGGATTTGGCGATATACAGTTGAAATATTGTGGCTGAGTATGTAACTTTGTTGGACAAAAGTTGAGCAGGTCAAAATCATCATGGAGTGGAGGAAATGGCCGTTCTTTCCGATCATCGTTTCAGGAGGAAGCATGGAAAAGGTATAATCGTAGGCTGCAAGAGGAGTATGAAGAAGAAATGGAGAGGGTGGTAAGAATTCTCTGGCTATTTATCATTTTCTTTGTTACTTTGAATTTGAAATTTGATGAGAAGCTCTAGAGATGCTTTTTTGGCCAGAATCTTATTTGATCCTGTTGGCTAACCTCAAGTTTAGTTCTTGATTTAAGTTTCCAAATTCTCTCTCTCTCCTTCTTTATCTCTCTCTTAATGACCATGATATGGGACGCCACTTCTTGAATCATGTTAATGGCCTACCTCCTAAGAAGCATGGATACAGATACAGGCCACATACACGACACATTTGGACATTGTGACGTGTCATTTTTTAGAAGTTTAGGATAATGACCGAGGAAATACATGTTTATAAAAGTAAACAATTTTTAAAATATATATAATTTTTATACAATAATGAAATTCAAAGTCTGTTATATATTTATATGCTTAAGAAAATGAGTTTGATGTATTTCGATCCTAAAATTTATGATTTTTTTTCTCCTATATCATTATGTGTCGATTTGGTGTGCTTAACAAATGTTGGTTATGTGTCTAAAAAATTTGGACCTATCTTGACTTTGTCAACTAGAGTCTTAACACATGTCTATTGTGCTAATAAATGTGCAACAAGTGTTATAGTATCCAAGTGTATTTAGATCAGGATATGAAATCCAGATTCGGCACCTAATGATTCCGACATTCCTTTATATCTTCCGCAACATGATCATGTTACCTACCTGTCTTGAATTGCTTCTAAGAGTAAAGACTATCCCCACAAATCAACAAGGGTCTTTTTAGCATGATTTGTCTTCACTCACATGCTTCTTAGAAAAATCCCTAGAAGGTCACCTAACATAAAATTACTCCAAACCAAACACGCTTAACTTTGAAGTTCTATGATTGAGTCATCGAAAAGAAAGTTGTACCTTGTTGGTATGACTAGTAGCTATCCATTCTTTTTGGCATTTCTTAGTCATCATATTTTCAGTATCACTCTCATTCAAAAGTGATATCGGTTCATTGATTTATGCCTCATTTACTTGAACGTCACATGCTCACCAACTGCCGTCTTGGTTTGTCCTCGCACCACCTCCTACTAGGAGAGATTCTGCTTTGATACCATCTATTTCAATCATCAATCATTAGGAGTATTTGTCGAACGTGGACACTAGTCAAACTTAAGTGTCAATGCTTCTTGGCCTGCCTCTAATCCCCCACGATGGTTTGCCCACTCACGGCCAGTTCCAGGAGGAAACAAATGTTTAAGTTATTTAGTATTCAGCATATGATTTGAACACTGGACTCTGAAGCCATCTCAAACAGTCCAAGCCGCTAGTAATAGTGTCATGGCACTTTTGGGATTCAAAGCTTTCAAATTCTTTATCTCACCATGACGTATTTTATCCTCTTCGCAACCTTTATTTTATTTCTTTCTCACTGTGGATTCTCGATACCTCGTCATTTTGTTTTTTGTCTTACTGGATCTCACTGCCCTGTTTGATTTAGGAGCGTATAAGGCGCATGCAGAATGTATTCAACCGAGAGAGGAACAAATACAAGAGAGGTTACGAAAGCTGGAGAGAGAATGATCCTGGTGCATATCATCAGCATCACCAGCGAGATGATTGGTATTGGAAGGCCGAGACATTTTACAGAGAGCAACAAAGTAATAATCATAGGGAAACTCCAAGAGTCAGAACAAGTTACTTGTTATCTCATCATTACACAGTTTTGGGTCTCGACAGGTGAATTTACTGTTTGATAACATTGCTTACAATTAAAATACGTATAGTTTTTCCTTCCCGGTCCGATTTTGGTGAGGATTAAACCTGGGACTGTTCCTCTTTTCGCATATTGAGACGTTCGTTGTATGGTCACCTTCCATTCGCTGGACCCTGGAATAGTTTTATGGTCTGATGGATTTAGTTTCAATTGTCTGTGTTAAAAGTGACATCTTATCTTAATTTCTGCTACAGGTGTCGAAAAACACCTTACACAGATGCTGAGATTAAGGTATGTTTAATTCTAGTTCATTTAAGCTCCTCCTATGTTATTGTACTAGAGTCGAAGCTTTTGCTGTCGGTTTCAATGAAGTATTTTATTATTCAAGTCCTGGGTTGTGAATTGAACTATTCATGATCACAGACAGCATTCCAATCCAAGGCGAAGCAGTTTCATCCAGATCAGAACCAGGATAATAAAGGTACCATGGAAGATAATCATACTTTCTTTTTCTAATATTCATCTTCATTTTCTACTCTAGCTAGCTTCTTATGATCATTGTTTTGCAGAGGCTGCTGAGGCCAAGTTCAAAGAGGTGATGACATCTTATGACGCCATAAAGTTAGAAAGAAAGAGCAGTAGAGCGTAAGACAGACTAACTGCACGTCTAGTCGTCGGTGGAACCATTTTTAACAGTATGAGATATTTTATTGGCTTTTTGCTAGAACACCCCTCCCCCGAGTTTGTTAGTATAGTAAAGCAAAAAATAAGATTGGGTCAGCCATGTATTATTAATATTTGATTTCGTAGGAGCGTGATATCACGCAGAAATGGCAAAGCTGTACGTTTTACTTGA ATGAGAAAGGGAAATTAATTCTCACCTTTCATTTCTCAATTCGTTCATCTTCGTCTTCTGCTTTGAATTTGCCCTAAACCCTTCTGAATTCTCAGAGAAAGCCATTAATTAGTAGCACAAGCGAATTGAGAGGAGACGAGGGTTTGTTCCTCAAGGCGGTGCGGGGAAGGGAGAAGAGCGGAATTGAGAAGACGAGGAGGGGAGAAGGAATCCCTAAACCATGCTTTTAGGGTTTCGAATTTCACCGACATCTGCTATTAGAATCAGCTGAACGCGACTTTCAACATTCAGAGGAGATGAGTGACGACAATGGCAAATCGGATAAGGATAATCAATGGCAATCGCCAAGAGCACCGCATCAACAGAAAGAGGAGGAGGATACGAAACTCTGGGGAGTTCTTCTCTTCGGTTTGATCGGTGCCTCTGCCACCACTCTTGCCGTTAGTCATCTGCGGAGAACTGTTGATTGGGTATACACTCAGTTGAGCAGGTCAAAATCATCATGGAGTGGAGGAAATGGCCGTTCTTTCCGATCATCGTTTCAGGAGGAAGCATGGAAAAGGTATAATCGTAGGCTGCAAGAGGAGTATGAAGAAGAAATGGAGAGGGTGGAGCGTATAAGGCGCATGCAGAATGTATTCAACCGAGAGAGGAACAAATACAAGAGAGGTTACGAAAGCTGGAGAGAGAATGATCCTGGTGCATATCATCAGCATCACCAGCGAGATGATTGGTATTGGAAGGCCGAGACATTTTACAGAGAGCAACAAAGTAATAATCATAGGGAAACTCCAAGAGTCAGAACAAGTTACTTGTTATCTCATCATTACACAGTTTTGGGTCTCGACAGGTGTCGAAAAACACCTTACACAGATGCTGAGATTAAGACAGCATTCCAATCCAAGGCGAAGCAGTTTCATCCAGATCAGAACCAGGATAATAAAGAGGCTGCTGAGGCCAAGTTCAAAGAGGTGATGACATCTTATGACGCCATAAAGTTAGAAAGAAAGAGCAGTAGAGCGAGCGTGATATCACGCAGAAATGGCAAAGCTGTACGTTTTACTTGA ATGAGTGACGACAATGGCAAATCGGATAAGGATAATCAATGGCAATCGCCAAGAGCACCGCATCAACAGAAAGAGGAGGAGGATACGAAACTCTGGGGAGTTCTTCTCTTCGGTTTGATCGGTGCCTCTGCCACCACTCTTGCCGTTAGTCATCTGCGGAGAACTGTTGATTGGGTATACACTCAGTTGAGCAGGTCAAAATCATCATGGAGTGGAGGAAATGGCCGTTCTTTCCGATCATCGTTTCAGGAGGAAGCATGGAAAAGGTATAATCGTAGGCTGCAAGAGGAGTATGAAGAAGAAATGGAGAGGGTGGAGCGTATAAGGCGCATGCAGAATGTATTCAACCGAGAGAGGAACAAATACAAGAGAGGTTACGAAAGCTGGAGAGAGAATGATCCTGGTGCATATCATCAGCATCACCAGCGAGATGATTGGTATTGGAAGGCCGAGACATTTTACAGAGAGCAACAAAGTAATAATCATAGGGAAACTCCAAGAGTCAGAACAAGTTACTTGTTATCTCATCATTACACAGTTTTGGGTCTCGACAGGTGTCGAAAAACACCTTACACAGATGCTGAGATTAAGACAGCATTCCAATCCAAGGCGAAGCAGTTTCATCCAGATCAGAACCAGGATAATAAAGAGGCTGCTGAGGCCAAGTTCAAAGAGGTGATGACATCTTATGACGCCATAAAGTTAGAAAGAAAGAGCAGTAGAGCGAGCGTGATATCACGCAGAAATGGCAAAGCTGTACGTTTTACTTGA MSDDNGKSDKDNQWQSPRAPHQQKEEEDTKLWGVLLFGLIGASATTLAVSHLRRTVDWVYTQLSRSKSSWSGGNGRSFRSSFQEEAWKRYNRRLQEEYEEEMERVERIRRMQNVFNRERNKYKRGYESWRENDPGAYHQHHQRDDWYWKAETFYREQQSNNHRETPRVRTSYLLSHHYTVLGLDRCRKTPYTDAEIKTAFQSKAKQFHPDQNQDNKEAAEAKFKEVMTSYDAIKLERKSSRASVISRRNGKAVRFT Homology
BLAST of CmaCh12G006170 vs. ExPASy Swiss-Prot
Match: Q316U7 (Chaperone protein DnaJ OS=Desulfovibrio alaskensis (strain ATCC BAA 1058 / DSM 17464 / G20) OX=207559 GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy Swiss-Prot
Match: A3DF24 (Chaperone protein DnaJ OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06 Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy Swiss-Prot
Match: Q9HJ83 (Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=dnaJ PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy Swiss-Prot
Match: A7HZ38 (Chaperone protein DnaJ OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=dnaJ PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.8e-05 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy Swiss-Prot
Match: P25686 (DnaJ homolog subfamily B member 2 OS=Homo sapiens OX=9606 GN=DNAJB2 PE=1 SV=3) HSP 1 Score: 48.9 bits (115), Expect = 9.9e-05 Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy TrEMBL
Match: A0A6J1KLR9 (dnaJ protein P58IPK homolog OS=Cucurbita maxima OX=3661 GN=LOC111496415 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.8e-132 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy TrEMBL
Match: A0A6J1GHD2 (dnaJ protein P58IPK homolog OS=Cucurbita moschata OX=3662 GN=LOC111454181 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 6.0e-130 Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy TrEMBL
Match: A0A0A0LN54 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G353470 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112 Identity = 212/244 (86.89%), Postives = 226/244 (92.62%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy TrEMBL
Match: A0A1S3BAG5 (uncharacterized protein LOC103487809 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487809 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112 Identity = 211/244 (86.48%), Postives = 226/244 (92.62%), Query Frame = 0
BLAST of CmaCh12G006170 vs. ExPASy TrEMBL
Match: A0A1S3BAJ7 (uncharacterized protein LOC103487809 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487809 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-110 Identity = 210/244 (86.07%), Postives = 225/244 (92.21%), Query Frame = 0
BLAST of CmaCh12G006170 vs. NCBI nr
Match: XP_023002606.1 (dnaJ protein P58IPK homolog [Cucurbita maxima]) HSP 1 Score: 480.7 bits (1236), Expect = 7.8e-132 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmaCh12G006170 vs. NCBI nr
Match: XP_023537230.1 (dnaJ protein P58IPK homolog isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-130 Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0
BLAST of CmaCh12G006170 vs. NCBI nr
Match: XP_022951308.1 (dnaJ protein P58IPK homolog [Cucurbita moschata] >KAG6585723.1 hypothetical protein SDJN03_18456, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmaCh12G006170 vs. NCBI nr
Match: KAG7020624.1 (dnaJ-11 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 471.5 bits (1212), Expect = 4.7e-129 Identity = 237/242 (97.93%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CmaCh12G006170 vs. NCBI nr
Match: XP_038886417.1 (uncharacterized protein LOC120076612 isoform X1 [Benincasa hispida]) HSP 1 Score: 419.9 bits (1078), Expect = 1.6e-113 Identity = 213/241 (88.38%), Postives = 226/241 (93.78%), Query Frame = 0
BLAST of CmaCh12G006170 vs. TAIR 10
Match: AT4G07990.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70 Identity = 147/235 (62.55%), Postives = 178/235 (75.74%), Query Frame = 0
BLAST of CmaCh12G006170 vs. TAIR 10
Match: AT4G07990.2 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 233.4 bits (594), Expect = 2.0e-61 Identity = 137/235 (58.30%), Postives = 168/235 (71.49%), Query Frame = 0
BLAST of CmaCh12G006170 vs. TAIR 10
Match: AT3G08910.1 (DNAJ heat shock family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 0
BLAST of CmaCh12G006170 vs. TAIR 10
Match: AT5G01390.1 (DNAJ heat shock family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of CmaCh12G006170 vs. TAIR 10
Match: AT5G01390.2 (DNAJ heat shock family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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