Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCGTTTCTTGGAACACTCGTAAACTAAGTTGGACTCGGCGGATTTCCGAGGAATAAATTCCTTACTCCGATAAGGAATCTTCGAGTTTGCCTCCATTTTTTTTTTTTCAGATTTGCTCTTCCTCGCACCTGAAAACCTCAATTTGTCACGCAAGTTTATTTTGCTGATTTCATTGGGAAAATCCGGATTTTCCGAGAAAATCTGTTCATAGAGCTGCAAACATGGCGAATCTTAGCTCCGGATTTGATGAGATGGGTTCCTTCTCCTTCACGGACTTTCCTGAAGATGTTCAGTTATGTATTCTCTCCTTCCTCTCTCCCTCCGATGTAGTCAATTTCTCTTGTACATCGAAGAGAGTCGTCTCGCTCTGTAGGAATGATCGGAAACTGTGGTTTACGATGTGCGATCGGAGATGGGGATCCAAAACTCAGATCAAGAATTGGGGAAAAGGAAACCTTACTTACAGGTTACTCTATAGAACTCTTCTTCAATGGGAGAATTTATTAGGTTTTTGGCGCCGGAGTGGCTCGTCTAGCGTATCATCGCCCCCGCTGGTGTTCTTCGAATGGGGATCGGATTTTCTCGCAGGATTTAGGGTTTCTCCATCGAGTAACGGTACTTACGACGTGGTTAAGTCTCCATTTCTATGGCTGGGGCTCTCTTCAGAAGGTAAGGCCATGGGTTTTATTGACCCCAAGGGCTGTTCTGACTTCGCCGGGAAATTTTCGGATTTGGGGGAATCCGATTTCTCCGATTGCGATTTGGTTCCCATCGATTTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCAGACGTTTGTTTATCCGAATTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGGAGTTCAAGTTTCGCCAATTTGGCCGCCGCAACTGATGTGAACGAAGTGGCAAGTGGCTCTCCAGGAAGCTTACCGGACCAATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCTGGTGGGGATAGAGCTTCAAGGAGGCAAAGGAGGAGGGAGAGGGAAAGGCTAGGAAAGAAGAAATGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTTCGGCCATTACAGGGCTTGTGGAAGGTGTTGTCTCCCTCTCTTACCTCATTGTGTTTATGTAGTCTTTCAACTAGCTTGATATATACAATACAACAAAATATTAAGAACATGCTACCAAAACTTGAGAATTTAATGGCTTGGAAACATTCAAACCATCTGATTTCAGAAATTGCAGGTGGGTTTATTGATGTTTCTATGTTGTATAGCTGATGTGATCATTGTTAGGCTCTGATATCTGTACCAATTGAGCTAGATGAAGAAACATGCTGTATTTTTTGTCAATTTGATCGTTTCTTTGGCTGGTTAGGAGTAAAACAGTTGTTTGTTGATTTTAATTTCATTCTTGCAAGTGGTACAATAGTGCTGGTTATGTGAGATGATATAGCATGGACTCCTATTTCATCTTGCAGGGAATCAGTGATGATATGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTTCTTGTCGGAGGGTTAGGGACTCGTCCGAACGTTTCTCTAGTAATGCTCCCGTGTTTTGGACATCGAATACTACGTTCTTGGAAACTCCATTCTCCCTTGAGGAAGAACTTTTATATGACTGTCGAATACATGTTCGGCCTCTACCAGCCAATGACATTGAAGAGCTAGTGCCTTCAGTAGAAAATAAAAAGATTTCTCGCATCCTTTGCGTGAACTCGAGTTATGATCTAGTCCTACCGGACCTGGCTGGAAGTATTCCAAATCCTCGTAATGTCGAGGGAAGAATTTGGCAATACAATAATGGAACTTTTGGGTTCGGTTTCCTTAGGGATAACTTTATTATAGACCTGAAGCACATTGCTCGAAATGGTTTAATTCTGGATACTGTGGAATAATGTGTTTATTGATTCTCCTTTTAGTTAACATTGTAATGATTTGATACATTCTTTGGCCAAGATTATTCTTTATACAATGTACAGATTGATTATGAATTGTTGATATGTCAAAAGGTCACAAATACAATGTTCTTTTTCTTTTTCATGTAAAGCTAGAATGGTTGATCTGAAAGCATGGTTTGTCCCTATTGTATACAGGTTTTTTGACCTCATAGATTGAAAAGGGCTGTGAGCTTAGTCAAAAGACATAGTAGCCACTTATAGGATAAGCAGCCAACCTTCAGAATGAGGAGTCAAAAATAAGAACAAACCATGAAAGAAAATACGGATTAAACATGGAAAATAGATGTATAATGATATGAAATCCACC
mRNA sequence
GCCGTTTCTTGGAACACTCGTAAACTAAGTTGGACTCGGCGGATTTCCGAGGAATAAATTCCTTACTCCGATAAGGAATCTTCGAGTTTGCCTCCATTTTTTTTTTTTCAGATTTGCTCTTCCTCGCACCTGAAAACCTCAATTTGTCACGCAAGTTTATTTTGCTGATTTCATTGGGAAAATCCGGATTTTCCGAGAAAATCTGTTCATAGAGCTGCAAACATGGCGAATCTTAGCTCCGGATTTGATGAGATGGGTTCCTTCTCCTTCACGGACTTTCCTGAAGATGTTCAGTTATGTATTCTCTCCTTCCTCTCTCCCTCCGATGTAGTCAATTTCTCTTGTACATCGAAGAGAGTCGTCTCGCTCTGTAGGAATGATCGGAAACTGTGGTTTACGATGTGCGATCGGAGATGGGGATCCAAAACTCAGATCAAGAATTGGGGAAAAGGAAACCTTACTTACAGGTTACTCTATAGAACTCTTCTTCAATGGGAGAATTTATTAGGTTTTTGGCGCCGGAGTGGCTCGTCTAGCGTATCATCGCCCCCGCTGGTGTTCTTCGAATGGGGATCGGATTTTCTCGCAGGATTTAGGGTTTCTCCATCGAGTAACGGTACTTACGACGTGGTTAAGTCTCCATTTCTATGGCTGGGGCTCTCTTCAGAAGGTAAGGCCATGGGTTTTATTGACCCCAAGGGCTGTTCTGACTTCGCCGGGAAATTTTCGGATTTGGGGGAATCCGATTTCTCCGATTGCGATTTGGTTCCCATCGATTTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCAGACGTTTGTTTATCCGAATTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGGAGTTCAAGTTTCGCCAATTTGGCCGCCGCAACTGATGTGAACGAAGTGGCAAGTGGCTCTCCAGGAAGCTTACCGGACCAATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCTGGTGGGGATAGAGCTTCAAGGAGGCAAAGGAGGAGGGAGAGGGAAAGGCTAGGAAAGAAGAAATGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTTCGGCCATTACAGGGCTTGTGGAAGGGAATCAGTGATGATATGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTTCTTGTCGGAGGGTTAGGGACTCGTCCGAACGTTTCTCTAGTAATGCTCCCGTGTTTTGGACATCGAATACTACGTTCTTGGAAACTCCATTCTCCCTTGAGGAAGAACTTTTATATGACTGTCGAATACATGTTCGGCCTCTACCAGCCAATGACATTGAAGAGCTAGTGCCTTCAGTAGAAAATAAAAAGATTTCTCGCATCCTTTGCGTGAACTCGAGTTATGATCTAGTCCTACCGGACCTGGCTGGAAGTATTCCAAATCCTCGTAATGTCGAGGGAAGAATTTGGCAATACAATAATGGAACTTTTGGGTTCGGTTTCCTTAGGGATAACTTTATTATAGACCTGAAGCACATTGCTCGAAATGGTTTAATTCTGGATACTGTGGAATAATGTGTTTATTGATTCTCCTTTTAGTTAACATTGTAATGATTTGATACATTCTTTGGCCAAGATTATTCTTTATACAATGTACAGATTGATTATGAATTGTTGATATGTCAAAAGGTCACAAATACAATGTTCTTTTTCTTTTTCATGTAAAGCTAGAATGGTTGATCTGAAAGCATGGTTTGTCCCTATTGTATACAGGTTTTTTGACCTCATAGATTGAAAAGGGCTGTGAGCTTAGTCAAAAGACATAGTAGCCACTTATAGGATAAGCAGCCAACCTTCAGAATGAGGAGTCAAAAATAAGAACAAACCATGAAAGAAAATACGGATTAAACATGGAAAATAGATGTATAATGATATGAAATCCACC
Coding sequence (CDS)
ATGGCGAATCTTAGCTCCGGATTTGATGAGATGGGTTCCTTCTCCTTCACGGACTTTCCTGAAGATGTTCAGTTATGTATTCTCTCCTTCCTCTCTCCCTCCGATGTAGTCAATTTCTCTTGTACATCGAAGAGAGTCGTCTCGCTCTGTAGGAATGATCGGAAACTGTGGTTTACGATGTGCGATCGGAGATGGGGATCCAAAACTCAGATCAAGAATTGGGGAAAAGGAAACCTTACTTACAGGTTACTCTATAGAACTCTTCTTCAATGGGAGAATTTATTAGGTTTTTGGCGCCGGAGTGGCTCGTCTAGCGTATCATCGCCCCCGCTGGTGTTCTTCGAATGGGGATCGGATTTTCTCGCAGGATTTAGGGTTTCTCCATCGAGTAACGGTACTTACGACGTGGTTAAGTCTCCATTTCTATGGCTGGGGCTCTCTTCAGAAGGTAAGGCCATGGGTTTTATTGACCCCAAGGGCTGTTCTGACTTCGCCGGGAAATTTTCGGATTTGGGGGAATCCGATTTCTCCGATTGCGATTTGGTTCCCATCGATTTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCAGACGTTTGTTTATCCGAATTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGGAGTTCAAGTTTCGCCAATTTGGCCGCCGCAACTGATGTGAACGAAGTGGCAAGTGGCTCTCCAGGAAGCTTACCGGACCAATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCTGGTGGGGATAGAGCTTCAAGGAGGCAAAGGAGGAGGGAGAGGGAAAGGCTAGGAAAGAAGAAATGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTTCGGCCATTACAGGGCTTGTGGAAGGGAATCAGTGATGATATGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTTCTTGTCGGAGGGTTAGGGACTCGTCCGAACGTTTCTCTAGTAATGCTCCCGTGTTTTGGACATCGAATACTACGTTCTTGGAAACTCCATTCTCCCTTGAGGAAGAACTTTTATATGACTGTCGAATACATGTTCGGCCTCTACCAGCCAATGACATTGAAGAGCTAGTGCCTTCAGTAGAAAATAAAAAGATTTCTCGCATCCTTTGCGTGAACTCGAGTTATGATCTAGTCCTACCGGACCTGGCTGGAAGTATTCCAAATCCTCGTAATGTCGAGGGAAGAATTTGGCAATACAATAATGGAACTTTTGGGTTCGGTTTCCTTAGGGATAACTTTATTATAGACCTGAAGCACATTGCTCGAAATGGTTTAATTCTGGATACTGTGGAATAA
Protein sequence
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLEEELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE
Homology
BLAST of CmaCh12G006020 vs. ExPASy Swiss-Prot
Match:
Q84WW1 (F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1)
HSP 1 Score: 392.5 bits (1007), Expect = 6.5e-108
Identity = 210/447 (46.98%), Postives = 285/447 (63.76%), Query Frame = 0
Query: 16 FTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWG 75
F + PED+QL ILS L+P+++ +F+CTSKR SLC+ D K+W MCD+RWG KT+I+ W
Sbjct: 8 FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67
Query: 76 KGNLTYRLLYRTLLQWENLLGFWRRSG--SSSVSSPPLVFFEWGSDFLAGFRVSPSSNGT 135
G + YR LY+TL ENL+GFWR G + + SSPPLVFF+WGS F+ G RV + + T
Sbjct: 68 NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127
Query: 136 YDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPIDLSFMGKNH 195
Y+V K+PFL +G+S EG++ F+D G + DL E + S+ +LV +D++FMG H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187
Query: 196 FVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHF 255
++EEN+ F N E ++ ++ D ++ SP SE+Y
Sbjct: 188 IMVEENRCFTNNNRREDQR-------------SSGDESDDLISSPN------FSEMYTQL 247
Query: 256 ANRTSPGGDRASRRQRRRERER-LGKKKWEPEHFVKIVNCSPTPFRPLQGLWKGISDDMS 315
AN+TSPGGDR RRQ+R+E+ER + KWEPEHF+K+ +CSPTP RPLQGLWKG + S
Sbjct: 248 ANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKGFCEG-S 307
Query: 316 MDFYLVVYDDIGGISCRRVRD-SSERFSSNAPVFWTSNTTFLETPFSLEEELLYDCRIHV 375
++ YLV YD++GGI CR+V D S R++ PVFWT TF+ +PFS EEELL + RIH+
Sbjct: 308 IELYLVKYDEVGGIICRKVEDLSLSRYT--PPVFWTPKHTFIRSPFSAEEELLLNSRIHI 367
Query: 376 RPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEGRIWQYNNGTFG 435
P V +S +L + SS DLVLP G+ EGR+W Y+NGTFG
Sbjct: 368 SPF---------AEVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLYDNGTFG 419
Query: 436 FGFLRDNFIIDLKHIA-RNGLILDTVE 458
FGFLRD FIIDLK +A +G + D VE
Sbjct: 428 FGFLRDQFIIDLKRVALEDGCLADEVE 419
BLAST of CmaCh12G006020 vs. ExPASy TrEMBL
Match:
A0A6J1KU38 (F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111496422 PE=4 SV=1)
HSP 1 Score: 947.2 bits (2447), Expect = 2.5e-272
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 457
BLAST of CmaCh12G006020 vs. ExPASy TrEMBL
Match:
A0A6J1GI95 (F-box protein At3g12350-like OS=Cucurbita moschata OX=3662 GN=LOC111454151 PE=4 SV=1)
HSP 1 Score: 935.3 bits (2416), Expect = 1.0e-268
Identity = 448/457 (98.03%), Postives = 454/457 (99.34%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPS NGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKF+DLGESDFSDCD
Sbjct: 121 LAGFRVSPSRNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFADLGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVP+DLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKKKWEPEHFVKIVNCSPTPLRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPS+ENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457
BLAST of CmaCh12G006020 vs. ExPASy TrEMBL
Match:
A0A0A0LR36 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 SV=1)
HSP 1 Score: 818.9 bits (2114), Expect = 1.0e-233
Identity = 394/465 (84.73%), Postives = 423/465 (90.97%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSS +DEMGSFSFTDFPEDVQLCILSFLSPSD+ FSCTSKR VSLCRNDRKLWFTM
Sbjct: 1 MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSS--SVSSPPLVFFEWGS 120
CDR+WGSKTQIKNWGKG +TYRLLY+TL QWENL+GFWRRSGSS SV+SPPLVFFEWG
Sbjct: 61 CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
Query: 121 DFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSD 180
DFLAG RVSPS NGTYDV KSPFLW+ LSSEG+AM FI+ G S+FAGKF+DLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
Query: 181 CDLVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240
CDL+PIDLSFMGKNHFVIEEN F YP SPE+ KKGFRRSSS ANL AA TDV+
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
Query: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNC 300
V SGSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRERERLGK+KWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
Query: 301 SPTPFRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360
SPTP RPLQGLWKGIS+D+SMDFYLVVYDDIGGI+CR+V DSSER SS APVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
Query: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSI 420
LE PFS+EEE L+DCRIHV+PL ANDI+ELVPS+ENK ISRILCVNSSYDLVLPDLAGS
Sbjct: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
Query: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
PNPRNVEGRIWQY+NGTFGFGFLRDNFIIDLKH+ARNG I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465
BLAST of CmaCh12G006020 vs. ExPASy TrEMBL
Match:
A0A6J1BQZ2 (F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1)
HSP 1 Score: 808.9 bits (2088), Expect = 1.1e-230
Identity = 393/465 (84.52%), Postives = 417/465 (89.68%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
M NLSS FDEMGSFSFTDFPEDVQLCILSFLSPSD+ FSCTSKR VSLCRNDRKLWFTM
Sbjct: 1 MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSS--VSSPPLVFFEWGS 120
CDRRWGSKTQIKNWGKGN+ YRLLY+TL QWENL+GFWRRSG S+ VSSPPLVFFEWG
Sbjct: 61 CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120
Query: 121 DFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSD 180
DFLAG RVSPS NGTY V+KSPFLW+GLS EG+ M FIDP G S+F+GKF+D GE SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180
Query: 181 CDLVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240
CDLVPID+SFMGKNHFVIEEN TF YPNSPEQ KKGFRRSSS ANL AA TDVN
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240
Query: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNC 300
V GSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGK+KWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
Query: 301 SPTPFRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360
SPTP RPLQGLWKGISDDMSMDFYLVVYDDIGGI+CRRV DSSE+ SS APVFWTSN TF
Sbjct: 301 SPTPSRPLQGLWKGISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTF 360
Query: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSI 420
LE+PFSL EE L+DCRIHVRPL ANDI+ELVPS+ENK ISRILCVNSSYDLVLPDLAGS
Sbjct: 361 LESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGST 420
Query: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
PNPRNVEGRIW+Y+NGTFGFGFLRDNFIIDLKHIA+NG ILDTVE
Sbjct: 421 PNPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462
BLAST of CmaCh12G006020 vs. ExPASy TrEMBL
Match:
A0A5A7V081 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 PE=4 SV=1)
HSP 1 Score: 807.0 bits (2083), Expect = 4.1e-230
Identity = 390/465 (83.87%), Postives = 419/465 (90.11%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSS +DEMGSFSFTDFPEDVQLCILSFLSPSD+ FSCTSKR VSLCRNDRKLWFTM
Sbjct: 1 MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSS--SVSSPPLVFFEWGS 120
CDR+WGSKTQIKNWGKG +TYRLLY+TL QWENL+GFWRRSGSS SV+SPPLVFFEWG
Sbjct: 61 CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120
Query: 121 DFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSD 180
DFLAG RVSPS NGTYDV KSPFLWL LSS G+AM FID G S+ AGKF++LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180
Query: 181 CDLVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240
DL+PIDLSFMGKNHFVIEEN F YP SPE+ KKGFRRSSS ANL AA TDV+
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240
Query: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNC 300
V SGSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRERERLGK+KWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
Query: 301 SPTPFRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360
SPTP RPLQGLWKGIS+D+SMDFYLVVYDDIGGI+CR+V DSSER SS APVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360
Query: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSI 420
LE PFS+EEE L+DCRIHV+PL ANDI+ELVPS+ENK ISRILCVNSSYDLVLPDLAGS
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
Query: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
PNPRNVEGRIWQY+NGTFGFGFLRDNFIIDLKH+ARNG I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465
BLAST of CmaCh12G006020 vs. NCBI nr
Match:
XP_023002618.1 (F-box protein At3g12350-like [Cucurbita maxima])
HSP 1 Score: 947.2 bits (2447), Expect = 5.2e-272
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 457
BLAST of CmaCh12G006020 vs. NCBI nr
Match:
KAG6585709.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 937.2 bits (2421), Expect = 5.4e-269
Identity = 449/457 (98.25%), Postives = 455/457 (99.56%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSD+GESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDMGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVP+DLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPS+ENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457
BLAST of CmaCh12G006020 vs. NCBI nr
Match:
KAG7020612.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 935.6 bits (2417), Expect = 1.6e-268
Identity = 449/457 (98.25%), Postives = 454/457 (99.34%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVP+DLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPS+ENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457
BLAST of CmaCh12G006020 vs. NCBI nr
Match:
XP_022951260.1 (F-box protein At3g12350-like [Cucurbita moschata])
HSP 1 Score: 935.3 bits (2416), Expect = 2.1e-268
Identity = 448/457 (98.03%), Postives = 454/457 (99.34%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPS NGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKF+DLGESDFSDCD
Sbjct: 121 LAGFRVSPSRNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFADLGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVP+DLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKKKWEPEHFVKIVNCSPTPLRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPS+ENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457
BLAST of CmaCh12G006020 vs. NCBI nr
Match:
XP_023538289.1 (F-box protein At3g12350-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 921.0 bits (2379), Expect = 4.0e-264
Identity = 445/457 (97.37%), Postives = 450/457 (98.47%), Query Frame = 0
Query: 1 MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60
MANLSS FDEMGSF+FTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1 MANLSSEFDEMGSFTFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
Query: 61 CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEW SDF
Sbjct: 61 CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWCSDF 120
Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
Query: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
LVP+DLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300
LPDQLMSEIYQHFANRTSPG ASRRQRRRE+ERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPG---ASRRQRRREKERLGKKKWEPEHFVKIVNCSPTPLRPL 300
Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
Query: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
EELLYDCRIHVRPLPANDIEELVPS+ENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
Query: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 458
RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 454
BLAST of CmaCh12G006020 vs. TAIR 10
Match:
AT3G12350.1 (F-box family protein )
HSP 1 Score: 392.5 bits (1007), Expect = 4.6e-109
Identity = 210/447 (46.98%), Postives = 285/447 (63.76%), Query Frame = 0
Query: 16 FTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWG 75
F + PED+QL ILS L+P+++ +F+CTSKR SLC+ D K+W MCD+RWG KT+I+ W
Sbjct: 8 FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67
Query: 76 KGNLTYRLLYRTLLQWENLLGFWRRSG--SSSVSSPPLVFFEWGSDFLAGFRVSPSSNGT 135
G + YR LY+TL ENL+GFWR G + + SSPPLVFF+WGS F+ G RV + + T
Sbjct: 68 NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127
Query: 136 YDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPIDLSFMGKNH 195
Y+V K+PFL +G+S EG++ F+D G + DL E + S+ +LV +D++FMG H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187
Query: 196 FVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHF 255
++EEN+ F N E ++ ++ D ++ SP SE+Y
Sbjct: 188 IMVEENRCFTNNNRREDQR-------------SSGDESDDLISSPN------FSEMYTQL 247
Query: 256 ANRTSPGGDRASRRQRRRERER-LGKKKWEPEHFVKIVNCSPTPFRPLQGLWKGISDDMS 315
AN+TSPGGDR RRQ+R+E+ER + KWEPEHF+K+ +CSPTP RPLQGLWKG + S
Sbjct: 248 ANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKGFCEG-S 307
Query: 316 MDFYLVVYDDIGGISCRRVRD-SSERFSSNAPVFWTSNTTFLETPFSLEEELLYDCRIHV 375
++ YLV YD++GGI CR+V D S R++ PVFWT TF+ +PFS EEELL + RIH+
Sbjct: 308 IELYLVKYDEVGGIICRKVEDLSLSRYT--PPVFWTPKHTFIRSPFSAEEELLLNSRIHI 367
Query: 376 RPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEGRIWQYNNGTFG 435
P V +S +L + SS DLVLP G+ EGR+W Y+NGTFG
Sbjct: 368 SPF---------AEVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLYDNGTFG 419
Query: 436 FGFLRDNFIIDLKHIA-RNGLILDTVE 458
FGFLRD FIIDLK +A +G + D VE
Sbjct: 428 FGFLRDQFIIDLKRVALEDGCLADEVE 419
BLAST of CmaCh12G006020 vs. TAIR 10
Match:
AT3G12350.2 (F-box family protein )
HSP 1 Score: 266.5 bits (680), Expect = 3.8e-71
Identity = 137/293 (46.76%), Postives = 191/293 (65.19%), Query Frame = 0
Query: 16 FTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWG 75
F + PED+QL ILS L+P+++ +F+CTSKR SLC+ D K+W MCD+RWG KT+I+ W
Sbjct: 8 FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67
Query: 76 KGNLTYRLLYRTLLQWENLLGFWRRSG--SSSVSSPPLVFFEWGSDFLAGFRVSPSSNGT 135
G + YR LY+TL ENL+GFWR G + + SSPPLVFF+WGS F+ G RV + + T
Sbjct: 68 NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127
Query: 136 YDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPIDLSFMGKNH 195
Y+V K+PFL +G+S EG++ F+D G + DL E + S+ +LV +D++FMG H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187
Query: 196 FVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHF 255
++EEN+ F N E ++ ++ D ++ SP SE+Y
Sbjct: 188 IMVEENRCFTNNNRREDQR-------------SSGDESDDLISSPN------FSEMYTQL 247
Query: 256 ANRTSPGGDRASRRQRRRERER-LGKKKWEPEHFVKIVNCSPTPFRPLQGLWK 306
AN+TSPGGDR RRQ+R+E+ER + KWEPEHF+K+ +CSPTP RPLQGLWK
Sbjct: 248 ANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWK 277
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q84WW1 | 6.5e-108 | 46.98 | F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KU38 | 2.5e-272 | 100.00 | F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111496422 PE=4 SV... | [more] |
A0A6J1GI95 | 1.0e-268 | 98.03 | F-box protein At3g12350-like OS=Cucurbita moschata OX=3662 GN=LOC111454151 PE=4 ... | [more] |
A0A0A0LR36 | 1.0e-233 | 84.73 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 ... | [more] |
A0A6J1BQZ2 | 1.1e-230 | 84.52 | F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1 | [more] |
A0A5A7V081 | 4.1e-230 | 83.87 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_023002618.1 | 5.2e-272 | 100.00 | F-box protein At3g12350-like [Cucurbita maxima] | [more] |
KAG6585709.1 | 5.4e-269 | 98.25 | F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG7020612.1 | 1.6e-268 | 98.25 | F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022951260.1 | 2.1e-268 | 98.03 | F-box protein At3g12350-like [Cucurbita moschata] | [more] |
XP_023538289.1 | 4.0e-264 | 97.37 | F-box protein At3g12350-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |