CmaCh12G005680 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATTAACCAAATTATATCATTATAACATTTCATTCCATCCCTTTGAAACTCATGAACATCTCTTGAGAATTTCGATTCTAAAGTTCTTGGTAAAGCGTTTGAATTTTGTTGGAAGCTCCACAGCATGCACCAATCGCAGGTATTAATTAAGCCATTCCTACATCTTCGATCACTAATGATCATAACCCAACTTAGTTCCTCTAATTGTGTCTTGTCTGAAGGGTTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTAGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAACGAGATGATAGCCAAGGGCGTGGGGTTTTGGGCAGTGCGGCCGCTGCTGTGGCGAATACTCTTCGTTCTGCTAAGGATGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGATTCGAAGCAGTGAAGTATGGATTATGTAATGTAATATGAACTGTGAATGCTTTTGTTTTATATTTAATGTCTGGTTCCAACTGGGAAGCTGAAGTTTTGTATATAGTGTGTGAAATAATGGAACCAAAATTGATCACAACTCGGCGTAGTGTTCTAAGGTGAAAGGTTCACAGAAATGGTTCCATTTCTGATGTTAGATGAACACGATTCTCCACAATGGTATGATATTTTTCACTTTGAGCTTAGCTCTCATAACCACCTCGTACCTTTGCGGCTTCGTACCCATGGAGATAGTATTCCTTATTTATAAACTTATGATCATTCTATTCTCTAAACTAGTCGCTATTATCTCTTTTTACGCGTGTCTGGGTATAGGCTATTGTCTCTTTTTACGC CTAAATTAACCAAATTATATCATTATAACATTTCATTCCATCCCTTTGAAACTCATGAACATCTCTTGAGAATTTCGATTCTAAAGTTCTTGGTAAAGCGTTTGAATTTTGTTGGAAGCTCCACAGCATGCACCAATCGCAGGGTTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTAGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAACGAGATGATAGCCAAGGGCGTGGGGTTTTGGGCAGTGCGGCCGCTGCTGTGGCGAATACTCTTCGTTCTGCTAAGGATGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGATTCGAAGCAGTGAAGTATGGATTATGTAATGTAATATGAACTGTGAATGCTTTTGTTTTATATTTAATGTCTGGTTCCAACTGGGAAGCTGAAGTTTTGTATATAGTGTGTGAAATAATGGAACCAAAATTGATCACAACTCGGCGTAGTGTTCTAAGGTGAAAGGTTCACAGAAATGGTTCCATTTCTGATGTTAGATGAACACGATTCTCCACAATGGTATGATATTTTTCACTTTGAGCTTAGCTCTCATAACCACCTCGTACCTTTGCGGCTTCGTACCCATGGAGATAGTATTCCTTATTTATAAACTTATGATCATTCTATTCTCTAAACTAGTCGCTATTATCTCTTTTTACGCGTGTCTGGGTATAGGCTATTGTCTCTTTTTACGC ATGCACCAATCGCAGGGTTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTAGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAACGAGATGATAGCCAAGGGCGTGGGGTTTTGGGCAGTGCGGCCGCTGCTGTGGCGAATACTCTTCGTTCTGCTAAGGATGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGA MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQRDDSQGRGVLGSAAAAVANTLRSAKDAIFGKGKERNDD Homology
BLAST of CmaCh12G005680 vs. ExPASy TrEMBL
Match: A0A067LC75 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.0e-17 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of CmaCh12G005680 vs. ExPASy TrEMBL
Match: A0A6A1W5Z9 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.4e-16 Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of CmaCh12G005680 vs. ExPASy TrEMBL
Match: A0A7J7CPR1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00219 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.1e-14 Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of CmaCh12G005680 vs. ExPASy TrEMBL
Match: A0A6A6M7Q3 (SASA domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_004982 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.4e-14 Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of CmaCh12G005680 vs. ExPASy TrEMBL
Match: A0A5N5NRJ4 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_002689 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.2e-14 Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CmaCh12G005680 vs. NCBI nr
Match: KAG6585682.1 (hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020595.1 hypothetical protein SDJN02_17281 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163.3 bits (412), Expect = 9.3e-37 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of CmaCh12G005680 vs. NCBI nr
Match: KDP41684.1 (hypothetical protein JCGZ_16091 [Jatropha curcas]) HSP 1 Score: 97.1 bits (240), Expect = 8.2e-17 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of CmaCh12G005680 vs. NCBI nr
Match: KAB1220313.1 (hypothetical protein CJ030_MR3G019059 [Morella rubra]) HSP 1 Score: 93.6 bits (231), Expect = 9.1e-16 Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of CmaCh12G005680 vs. NCBI nr
Match: KAG5251227.1 (hypothetical protein IMY05_002G0107300 [Salix suchowensis]) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-14 Identity = 51/85 (60.00%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of CmaCh12G005680 vs. NCBI nr
Match: KAG6784483.1 (hypothetical protein POTOM_010179 [Populus tomentosa]) HSP 1 Score: 87.4 bits (215), Expect = 6.5e-14 Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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