CmaCh12G005470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G005470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Calcium-binding EF-hand
Location	Cma_Chr12: 2847136 .. 2847519 (-)
RNA-Seq Expression	CmaCh12G005470
Synteny	CmaCh12G005470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGAAGGTTTCCCTCGATATAAAACGCCACACAACCCATACGATTGCTATCAACCCGAACAAAAATCTCCTTCCCTTTGCTCGTCGTCTTCAACATCTTCGATGGGGAATGCCAAAAGTACAAATTACAAACGAGTTTTGGTTCCATTCACGGAGGAGCAACTAGCCGCCATTTTCAAAAGCCACGACCGAGACGGTGATGGGAAGCTATCAAAGGAGGAGTTGAAGCAAGCCTTCAACTATCTTGGCTCGCGCTTTAGCTCCTTTAGAGTCAAAGAAGCCCTACGTGCTGCCGATACGAACGGTGATGGTTTCATCAGCATGGACGAGATGAATAAGCTTATTAAATATACCAAAGGTCGTAAATATACTCTTTGTTAA

mRNA sequence

ATGCGAGAAGGTTTCCCTCGATATAAAACGCCACACAACCCATACGATTGCTATCAACCCGAACAAAAATCTCCTTCCCTTTGCTCGTCGTCTTCAACATCTTCGATGGGGAATGCCAAAAGTACAAATTACAAACGAGTTTTGGTTCCATTCACGGAGGAGCAACTAGCCGCCATTTTCAAAAGCCACGACCGAGACGGTGATGGGAAGCTATCAAAGGAGGAGTTGAAGCAAGCCTTCAACTATCTTGGCTCGCGCTTTAGCTCCTTTAGAGTCAAAGAAGCCCTACGTGCTGCCGATACGAACGGTGATGGTTTCATCAGCATGGACGAGATGAATAAGCTTATTAAATATACCAAAGGTCGTAAATATACTCTTTGTTAA

Coding sequence (CDS)

ATGCGAGAAGGTTTCCCTCGATATAAAACGCCACACAACCCATACGATTGCTATCAACCCGAACAAAAATCTCCTTCCCTTTGCTCGTCGTCTTCAACATCTTCGATGGGGAATGCCAAAAGTACAAATTACAAACGAGTTTTGGTTCCATTCACGGAGGAGCAACTAGCCGCCATTTTCAAAAGCCACGACCGAGACGGTGATGGGAAGCTATCAAAGGAGGAGTTGAAGCAAGCCTTCAACTATCTTGGCTCGCGCTTTAGCTCCTTTAGAGTCAAAGAAGCCCTACGTGCTGCCGATACGAACGGTGATGGTTTCATCAGCATGGACGAGATGAATAAGCTTATTAAATATACCAAAGGTCGTAAATATACTCTTTGTTAA

Protein sequence

MREGFPRYKTPHNPYDCYQPEQKSPSLCSSSSTSSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC

Homology

[Close]

BLAST of CmaCh12G005470 vs. ExPASy Swiss-Prot
Match: P62203 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 52  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDE 111
           TEE+L   F+  DRDGDG +S +EL+     LG + ++  V E +R AD +GDG I+ +E
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEE 141

Query: 112 MNKLI 117
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of CmaCh12G005470 vs. ExPASy Swiss-Prot
Match: P24044 (Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 52  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDE 111
           TEE+L   F+  DRDGDG +S +EL+     LG + ++  V E +R AD +GDG I+ +E
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEE 141

Query: 112 MNKLI 117
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of CmaCh12G005470 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 53  EEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEM 112
           EE++   FK  D+DG+G ++ EEL      LG R S   V + +R ADT+GDG I+ +E 
Sbjct: 84  EEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143

Query: 113 NKLI 117
           +++I
Sbjct: 144 SRVI 147

[Close]

BLAST of CmaCh12G005470 vs. ExPASy Swiss-Prot
Match: O96102 (Calmodulin OS=Physarum polycephalum OX=5791 PE=2 SV=3)

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-07
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 52  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDE 111
           TEE++   FK  D+DG+G +S  EL+     LG + S   V E +R AD +GDG ++ DE
Sbjct: 82  TEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDE 141

Query: 112 MNKLI 117
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of CmaCh12G005470 vs. ExPASy Swiss-Prot
Match: P27166 (Calmodulin OS=Stylonychia lemnae OX=5949 PE=3 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-07
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 52  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDE 111
           TEE+L   FK  DRDG+G +S  EL+     LG + +   V E +R AD +GDG I+ +E
Sbjct: 82  TEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEE 141

Query: 112 MNKLI 117
             +++
Sbjct: 142 FVRMM 146

[Close]

BLAST of CmaCh12G005470 vs. ExPASy TrEMBL
Match: A0A5A7V5B0 (Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00320 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.8e-34
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95
           MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDG L+KEELKQAF YLGSRFS+FRV+EA
Sbjct: 1   MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEA 60

Query: 96  LRAADTNGDGFISMDEMNKLIKYTKGRKYTL 127
           LRAADTNGDG ISMDEM KLIKY K RKYT+
Sbjct: 61  LRAADTNGDGVISMDEMGKLIKYAKTRKYTI 91

[Close]

BLAST of CmaCh12G005470 vs. ExPASy TrEMBL
Match: A0A0A0LRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95
           MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDG L+KEELKQAF YLGSRF +FRV+EA
Sbjct: 1   MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEA 60

Query: 96  LRAADTNGDGFISMDEMNKLIKYTKGRKYTL 127
           LRAADTNGDG ISMDEM KLIKY K RKYT+
Sbjct: 61  LRAADTNGDGVISMDEMGKLIKYAKTRKYTI 91

[Close]

BLAST of CmaCh12G005470 vs. ExPASy TrEMBL
Match: A0A7N2KRS3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.6e-19
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 40  KSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAA 99
           K+  +KR  VPF E+QL  IFKSHD DGDGKLS++ELK AF YLGSR+ ++R  +ALR A
Sbjct: 234 KAMAFKRTSVPFNEQQLLNIFKSHDVDGDGKLSRDELKNAFKYLGSRWDAYRTDQALRQA 293

Query: 100 DTNGDGFISMDEMNKLIKYTKGRKYTL 127
           D N DG+I+ DE+ KL++Y     YT+
Sbjct: 294 DANDDGYITEDELKKLVEYALDCGYTV 320

[Close]

BLAST of CmaCh12G005470 vs. ExPASy TrEMBL
Match: A0A2N9FYQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.1e-18
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 40  KSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAA 99
           K  ++KR  +PFTEEQL  IFKSHD DGDGKLS++E+K+AF YLGSR+ ++R  +A+  A
Sbjct: 4   KVMSFKRTTIPFTEEQLMNIFKSHDADGDGKLSQDEVKKAFKYLGSRWDAYRANQAIHLA 63

Query: 100 DTNGDGFISMDEMNKLIKYTKGRKYTL 127
           D + DG+I  +E+ KL++Y     YT+
Sbjct: 64  DADDDGYIEEEELKKLVQYALDCGYTI 90

[Close]

BLAST of CmaCh12G005470 vs. ExPASy TrEMBL
Match: A0A0A0LL93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357850 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.8e-17
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 52  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDE 111
           +EEQLA IFK HD D D KL+KEEL +AFNYLGSR+++ RVKEA+RA D N DG IS+DE
Sbjct: 9   SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDE 68

Query: 112 MNKLIKYTKG 122
           M+KLI Y KG
Sbjct: 69  MSKLIVYVKG 78

[Close]

BLAST of CmaCh12G005470 vs. NCBI nr
Match: KAG7020569.1 (hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95
           MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA
Sbjct: 1   MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 60

Query: 96  LRAADTNGDGFISMDEMNKLIKYTKGRKYTLC 128
           LRAADTNGDGFISMDEMNKLIKYTKGRKYTLC
Sbjct: 61  LRAADTNGDGFISMDEMNKLIKYTKGRKYTLC 92

[Close]

BLAST of CmaCh12G005470 vs. NCBI nr
Match: KAG7020566.1 (hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42
Identity = 94/102 (92.16%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 20  PEQKSPSLCSSSSTSSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQA 79
           P +    LC SSS SSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQA
Sbjct: 20  PNKNLLFLCLSSSPSSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQA 79

Query: 80  FNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG 122
           FNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG
Sbjct: 80  FNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG 121

[Close]

BLAST of CmaCh12G005470 vs. NCBI nr
Match: KAG6585663.1 (hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39
Identity = 86/92 (93.48%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95
           MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA
Sbjct: 1   MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 60

Query: 96  LRAADTNGDGFISMDEMNKLIKYTKGRKYTLC 128
           LRAADTNGDGFISMDEMNKLIKYTK    ++C
Sbjct: 61  LRAADTNGDGFISMDEMNKLIKYTKAITTSVC 92

[Close]

BLAST of CmaCh12G005470 vs. NCBI nr
Match: KAG6598376.1 (hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.4 bits (394), Expect = 1.7e-34
Identity = 75/92 (81.52%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95
           MGN+KS  YKRVLVPF+EEQLA++FK+HD DGDGKL+KEELKQAF+YLGSRFSSFRV+EA
Sbjct: 1   MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEA 60

Query: 96  LRAADTNGDGFISMDEMNKLIKYTKGRKYTLC 128
           LRAADT+GDGFISM EM KLI+Y K RKYTLC
Sbjct: 61  LRAADTDGDGFISMAEMGKLIQYAKSRKYTLC 92

[Close]

BLAST of CmaCh12G005470 vs. NCBI nr
Match: KAG6585662.1 (hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-34
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95
           MGN+KS  YKRVLVP TEEQLA IFKSHDRDGDGKL+KEELKQAFNYLGSRFSSFR  EA
Sbjct: 1   MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEA 60

Query: 96  LRAADTNGDGFISMDEMNKLIKYTKGRKYTLC 128
           LRAAD +GDG I+M EM+KLI+YTK RKYTLC
Sbjct: 61  LRAADADGDGTINMAEMSKLIQYTKNRKYTLC 92

[Close]

BLAST of CmaCh12G005470 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 49  VPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFIS 108
           V    EQL  IFKS DRDG+G +S  EL  A   +G   +   + E ++ ADTNGDG IS
Sbjct: 76  VLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVIS 135

Query: 109 MDEMNKLI 117
             E   ++
Sbjct: 136 FGEFASIM 143

[Close]

BLAST of CmaCh12G005470 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 )

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 33/100 (33.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 22  QKSPSLCSSSSTSSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFN 81
           + S +L   S TSS  +  S+            +L  +F   D + DGK+S EEL+   +
Sbjct: 24  ESSRNLEDESRTSSNSSGSSS--------LNVNELRTVFDYMDANSDGKISGEELQSCVS 83

Query: 82  YLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG 122
            LG   SS  V+E ++ +D +GDGFI  +E  KL++   G
Sbjct: 84  LLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEGEDG 115

[Close]

BLAST of CmaCh12G005470 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 52.0 bits (123), Expect = 4.1e-07
Identity = 22/63 (34.92%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 54  EQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMN 113
           ++L  +F+  DRDGDG +S+ EL +    +G + ++   +  +R AD +GDGF+S  E +
Sbjct: 84  DELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFS 143

Query: 114 KLI 117
           K++
Sbjct: 144 KMM 146

[Close]

BLAST of CmaCh12G005470 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 51.6 bits (122), Expect = 5.4e-07
Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 19  QPEQKSPSLC---SSSSTSSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEE 78
           QP+     LC   S     S G  +  N           +L A+F   D + DG++S EE
Sbjct: 6   QPQSSFKKLCRKLSPKREDSAGEIQQHNSSN--GEDKNRELEAVFSYMDANRDGRISPEE 65

Query: 79  LKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIK 118
           L+++F  LG + S      A+R +DT+GDG +  +E ++LIK
Sbjct: 66  LQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIK 105

[Close]

BLAST of CmaCh12G005470 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 51.6 bits (122), Expect = 5.4e-07
Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 19  QPEQKSPSLC---SSSSTSSMGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEE 78
           QP+     LC   S     S G  +  N           +L A+F   D + DG++S EE
Sbjct: 6   QPQSSFKKLCRKLSPKREDSAGEIQQHNSSN--GEDKNRELEAVFSYMDANRDGRISPEE 65

Query: 79  LKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIK 118
           L+++F  LG + S      A+R +DT+GDG +  +E ++LIK
Sbjct: 66  LQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIK 105

The following BLAST results are available for this feature:

BLAST of CmaCh12G005470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62203	1.4e-07	41.54	Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=...	[more]
P24044	1.4e-07	41.54	Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4	[more]
P05933	4.0e-07	40.63	Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c...	[more]
O96102	5.2e-07	40.00	Calmodulin OS=Physarum polycephalum OX=5791 PE=2 SV=3	[more]
P27166	5.2e-07	40.00	Calmodulin OS=Stylonychia lemnae OX=5949 PE=3 SV=2	[more]

BLAST of CmaCh12G005470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5B0	6.8e-34	81.32	Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LRB6	3.4e-33	80.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1	[more]
A0A7N2KRS3	3.6e-19	56.32	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9FYQ0	3.1e-18	51.72	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1	[more]
A0A0A0LL93	5.8e-17	68.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357850 PE=4 SV=1	[more]

BLAST of CmaCh12G005470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020569.1	1.2e-43	100.00	hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7020566.1	1.7e-42	92.16	hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6585663.1	1.7e-39	93.48	hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6598376.1	1.7e-34	81.52	hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585662.1	3.7e-34	82.61	hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh12G005470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18530.1	1.1e-07	42.65	EF hand calcium-binding protein family	[more]
AT5G42380.1	1.8e-07	33.00	calmodulin like 37	[more]
AT3G51920.1	4.1e-07	34.92	calmodulin 9	[more]
AT1G76650.1	5.4e-07	32.35	calmodulin-like 38	[more]
AT1G76650.3	5.4e-07	32.35	calmodulin-like 38	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 91..119 e-value: 0.016 score: 24.4 coord: 55..83 e-value: 0.0028 score: 26.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 53..116 e-value: 2.4E-13 score: 50.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 87..122 score: 12.225983
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 51..86 score: 15.963966
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 55..117 e-value: 2.54561E-17 score: 68.7285
None	No IPR available	GENE3D	1.10.238.10		coord: 21..122 e-value: 4.4E-18 score: 67.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..39
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 44..118
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 44..118
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 100..112
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 64..76
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 46..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G005470.1	CmaCh12G005470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding