CmaCh12G005290 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G005290
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr12: 2743653 .. 2743980 (-)
RNA-Seq ExpressionCmaCh12G005290
SyntenyCmaCh12G005290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTTGGTTTTGTCTGTTTGGAGTGAAACTGAGAAGGAAAATTCATGAGAAGGCGATGAAGATGCTGAAGAAGGAGATGAGGAAGCTGGACTTTGTTCTTCAAGGTACTTCTCTTTGATCTTCTGATGCCTGTGGATGTCCATAACTCTTAAATTCAGAGAGGTTTTTCTTGACAGACCAATTCCTGAACCTGAAGAACAAACCCAATTCAAAACTTTAGTTTTAAGGACATTACCAAATCATTAGGAATTGATGAGAAGATTAGAGGGTTTGAAAGAGAATTGGGGATGTCTGCCCTTTTTGCCTTCTTTGCACCTTCTTAA

mRNA sequence

ATGGGGTTTTGGTTTTGTCTGTTTGGAGTGAAACTGAGAAGGAAAATTCATGAGAAGGCGATGAAGATGCTGAAGAAGGAGATGAGGAAGCTGGACTTTGTTCTTCAAGGAATTGATGAGAAGATTAGAGGGTTTGAAAGAGAATTGGGGATGTCTGCCCTTTTTGCCTTCTTTGCACCTTCTTAA

Coding sequence (CDS)

ATGGGGTTTTGGTTTTGTCTGTTTGGAGTGAAACTGAGAAGGAAAATTCATGAGAAGGCGATGAAGATGCTGAAGAAGGAGATGAGGAAGCTGGACTTTGTTCTTCAAGGAATTGATGAGAAGATTAGAGGGTTTGAAAGAGAATTGGGGATGTCTGCCCTTTTTGCCTTCTTTGCACCTTCTTAA

Protein sequence

MGFWFCLFGVKLRRKIHEKAMKMLKKEMRKLDFVLQGIDEKIRGFERELGMSALFAFFAPS
Homology
[Close]
BLAST of CmaCh12G005290 vs. NCBI nr
Match: KAG7021741.1 (hypothetical protein SDJN02_15468 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 0 

Query: 1  MGFWFCLFGVKLRRKIHEKAMKMLKKEMRKLDFVLQGIDEKIR 44
          MGFWFCLFGVKLRRKIHEKAMKMLKKEM+KLDFVLQG  +K++
Sbjct: 1  MGFWFCLFGVKLRRKIHEKAMKMLKKEMKKLDFVLQGSFKKVQ 43

The following BLAST results are available for this feature:
BLAST of CmaCh12G005290 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G005290 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh12G005290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7021741.11.2e-1186.05hypothetical protein SDJN02_15468 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmaCh12G005290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G005290.1CmaCh12G005290.1mRNA