CmaCh12G005230 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G005230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr12: 2719770 .. 2720659 (-)
RNA-Seq Expression	CmaCh12G005230
Synteny	CmaCh12G005230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTCTTTCTAACTTTATCTTTACACCTACGGATTAGAAAGCGTTGTTTACAATAAGCTGAGAAGGCACTGTAAGAAATGGAGCCAATTTTGATCCCTAAAGTCGAGCGGCAGTGAGGTGCAATTACTTCTCTATATATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCTACTGCCATACTTTTAGCAGACAGCTAACAAATTCAAACGCAGAGGACATATATCCTACGAGTGACTTCGACGATGAAGAGGAAGTACTCATCAGCTAATTCTTTTGTATTCTCTTTCATCTTATATGTAATATGTTTCTCTTAAGTTTTTTATCTTCTTCTCAGGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTGAGTCTAGAAATGAAGATAACACAGGAGATGAATTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCGAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCAAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCATACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAATCGCCGTCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

mRNA sequence

ATGTGTTCTTTCTAACTTTATCTTTACACCTACGGATTAGAAAGCGTTGTTTACAATAAGCTGAGAAGGCACTGTAAGAAATGGAGCCAATTTTGATCCCTAAAGTCGAGCGGCAGTGAGGTGCAATTACTTCTCTATATATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCTACTGCCATACTTTTAGCAGACAGCTAACAAATTCAAACGCAGAGGACATATATCCTACGAGTGACTTCGACGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTGAGTCTAGAAATGAAGATAACACAGGAGATGAATTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCGAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCAAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCATACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAATCGCCGTCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

Coding sequence (CDS)

ATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCTACTGCCATACTTTTAGCAGACAGCTAACAAATTCAAACGCAGAGGACATATATCCTACGAGTGACTTCGACGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTGAGTCTAGAAATGAAGATAACACAGGAGATGAATTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCGAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCAAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCATACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAATCGCCGTCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

Protein sequence

MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY

Homology

[Close]

BLAST of CmaCh12G005230 vs. ExPASy TrEMBL
Match: A0A6J1KP16 (uncharacterized protein LOC111495972 OS=Cucurbita maxima OX=3661 GN=LOC111495972 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 8.6e-125
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIY 60
           MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIY
Sbjct: 1   MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIY 60

Query: 61  PTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRN 120
           PTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRN
Sbjct: 61  PTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRN 120

Query: 121 EDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELC 180
           EDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELC
Sbjct: 121 EDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELC 180

Query: 181 HCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY 223
           HCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY
Sbjct: 181 HCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY 222

[Close]

BLAST of CmaCh12G005230 vs. ExPASy TrEMBL
Match: A0A6J1GHW9 (uncharacterized protein LOC111454089 OS=Cucurbita moschata OX=3662 GN=LOC111454089 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 202/207 (97.58%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPSKKSFLAAALKDAFC CHTFSRQL NSNAED YPTSDFDDEEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL
Sbjct: 61  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCSSAATKEAFFSVEANFS+GSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF
Sbjct: 121 TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           +PPLPKSPSESWSWSKWNKGTKVVKTY
Sbjct: 181 VPPLPKSPSESWSWSKWNKGTKVVKTY 207

[Close]

BLAST of CmaCh12G005230 vs. ExPASy TrEMBL
Match: A0A6J1C1I1 (uncharacterized protein LOC111007604 OS=Momordica charantia OX=3673 GN=LOC111007604 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.2e-95
Identity = 177/207 (85.51%), Postives = 185/207 (89.37%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPN S+K FLAAALKDAFC CHTF R+L NSNAED  P SD DDEEEEIVSE
Sbjct: 1   MGVFYQEDPPNSSRKCFLAAALKDAFCNCHTFGRRLPNSNAEDENPASDLDDEEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           I SRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKM ES NEDNTGDEF+SVQSFL
Sbjct: 61  IISRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNTGDEFFSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCSSAAT EAFFSVEANFS+ SSLNGLDF+DEDL+R + LQE CHCEGWPFGLCRKA+ 
Sbjct: 121 TCCSSAATNEAFFSVEANFSRCSSLNGLDFLDEDLRRRSILQEFCHCEGWPFGLCRKAIL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWSWS   K TKVVKTY
Sbjct: 181 LPPLPKSPSESWSWS---KATKVVKTY 204

[Close]

BLAST of CmaCh12G005230 vs. ExPASy TrEMBL
Match: A0A1S3BAA9 (uncharacterized protein LOC103487908 OS=Cucumis melo OX=3656 GN=LOC103487908 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 171/207 (82.61%), Postives = 182/207 (87.92%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA  LKDAFC CHTF + L   N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGVLKDAFCNCHTFRKPLPKFNDEDEYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RK NLSDSFSWVFSPATKELYITSMEIEKM ES NEDN GDEFYSVQSFL
Sbjct: 61  IRTRAMEKLKRKANLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFS+ SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWSWS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWSWS---KGTKIVKTY 204

[Close]

BLAST of CmaCh12G005230 vs. ExPASy TrEMBL
Match: A0A0A0LRD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360040 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92
Identity = 171/207 (82.61%), Postives = 183/207 (88.41%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA ALKDAFC CHTF + L   N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RKTNLSDSFSWVFSPATKELYITSMEIEKM ES NEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFS+ SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESW WS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWLWS---KGTKIVKTY 204

[Close]

BLAST of CmaCh12G005230 vs. NCBI nr
Match: XP_023001944.1 (uncharacterized protein LOC111495972 [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 1.8e-124
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIY 60
           MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIY
Sbjct: 1   MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIY 60

Query: 61  PTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRN 120
           PTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRN
Sbjct: 61  PTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRN 120

Query: 121 EDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELC 180
           EDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELC
Sbjct: 121 EDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELC 180

Query: 181 HCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY 223
           HCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY
Sbjct: 181 HCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY 222

[Close]

BLAST of CmaCh12G005230 vs. NCBI nr
Match: KAG6585650.1 (hypothetical protein SDJN03_18383, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020561.1 hypothetical protein SDJN02_17247, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPSKKSFLAAALKDAFC CHTFSRQL NSNAED YPTSDFDDEEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL
Sbjct: 61  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCSSAATKEAFFSVEANFS+GSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF
Sbjct: 121 TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWSWSKWNKGTKVVKTY
Sbjct: 181 LPPLPKSPSESWSWSKWNKGTKVVKTY 207

[Close]

BLAST of CmaCh12G005230 vs. NCBI nr
Match: XP_022951160.1 (uncharacterized protein LOC111454089 [Cucurbita moschata])

HSP 1 Score: 418.3 bits (1074), Expect = 4.1e-113
Identity = 202/207 (97.58%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPSKKSFLAAALKDAFC CHTFSRQL NSNAED YPTSDFDDEEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL
Sbjct: 61  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCSSAATKEAFFSVEANFS+GSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF
Sbjct: 121 TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           +PPLPKSPSESWSWSKWNKGTKVVKTY
Sbjct: 181 VPPLPKSPSESWSWSKWNKGTKVVKTY 207

[Close]

BLAST of CmaCh12G005230 vs. NCBI nr
Match: XP_038884891.1 (uncharacterized protein LOC120075509 [Benincasa hispida])

HSP 1 Score: 362.5 bits (929), Expect = 2.7e-96
Identity = 176/207 (85.02%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA ALKDAFC CHTFS+QL NSN +D Y TSDFDD+EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFSKQLPNSNDKDEYSTSDFDDQEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IRSRAMEKL+RKTNLSDSFSWVFSPATKELY+TSMEIEKM ES NEDNTGDEFYSVQSFL
Sbjct: 61  IRSRAMEKLKRKTNLSDSFSWVFSPATKELYVTSMEIEKMDESGNEDNTGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFS+ SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWS   WNKGTK+VKTY
Sbjct: 181 LPPLPKSPSESWS---WNKGTKIVKTY 204

[Close]

BLAST of CmaCh12G005230 vs. NCBI nr
Match: XP_022135711.1 (uncharacterized protein LOC111007604 [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 6.6e-95
Identity = 177/207 (85.51%), Postives = 185/207 (89.37%), Query Frame = 0


Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPN S+K FLAAALKDAFC CHTF R+L NSNAED  P SD DDEEEEIVSE
Sbjct: 1   MGVFYQEDPPNSSRKCFLAAALKDAFCNCHTFGRRLPNSNAEDENPASDLDDEEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           I SRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKM ES NEDNTGDEF+SVQSFL
Sbjct: 61  IISRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNTGDEFFSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCSSAAT EAFFSVEANFS+ SSLNGLDF+DEDL+R + LQE CHCEGWPFGLCRKA+ 
Sbjct: 121 TCCSSAATNEAFFSVEANFSRCSSLNGLDFLDEDLRRRSILQEFCHCEGWPFGLCRKAIL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWSWS   K TKVVKTY
Sbjct: 181 LPPLPKSPSESWSWS---KATKVVKTY 204

[Close]

BLAST of CmaCh12G005230 vs. TAIR 10
Match: AT1G47410.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 33  LAAALKDAFCYCHTF-SRQLTNSNAE---DIYPTSDFDDEEEEIVSEIRSRAMEKLRRKT 92
           +A  ++DA  YC+    R++T S+ E   D  P  DFD + E +V EIRSRAMEKLR+K 
Sbjct: 8   VATGVRDAITYCYRCKGRKVTLSDHEADDDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKR 67

Query: 93  NLS-DSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQ-SFLTCCSSAATKEA 152
               +  ++ F        +   +IE            +EF SV+ SF  CC S  + E 
Sbjct: 68  RTGMEGLTYKF--------VKEYDIE------------NEFCSVRSSFSECCMSDISIEG 127

Query: 153 FFSVEANFSQGSSLNGLDFVDE-------DLKRHTALQELCHCEGWPFGLCRKALFLPPL 212
           + + +  FS+ SSL GL+  ++       ++K+ + +QE CHC+GWPFGL RKA  LPPL
Sbjct: 128 YMTAKTEFSRSSSLKGLELENQWKMHYVNEIKKGSVIQEFCHCQGWPFGLGRKAALLPPL 186

Query: 213 PKSPSESWSWSKWNKGTKV 219
           PKSP+ESWSW K  + T V
Sbjct: 188 PKSPAESWSWRKPTRVTPV 186

[Close]

BLAST of CmaCh12G005230 vs. TAIR 10
Match: AT1G47410.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages. )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 33  LAAALKDAFCYCHTF-SRQLTNSNAE---DIYPTSDFDDEEEEIVSEIRSRAMEKLRRKT 92
           +A  ++DA  YC+    R++T S+ E   D  P  DFD + E +V EIRSRAMEKLR+K 
Sbjct: 8   VATGVRDAITYCYRCKGRKVTLSDHEADDDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKR 67

Query: 93  NLS-DSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQ-SFLTCCSSAATKEA 152
               +  ++ F        +   +IE            +EF SV+ SF  CC S  + E 
Sbjct: 68  RTGMEGLTYKF--------VKEYDIE------------NEFCSVRSSFSECCMSDISIEG 127

Query: 153 FFSVEANFSQGSSLNGLDFVDE-------DLKRHTALQELCHCEGWPFGLCRKALFLPPL 212
           + + +  FS+ SSL GL+  ++       ++K+ + +QE CHC+GWPFGL RKA  LPPL
Sbjct: 128 YMTAKTEFSRSSSLKGLELENQWKMHYVNEIKKGSVIQEFCHCQGWPFGLGRKAALLPPL 186

Query: 213 PKSPSESWSWSKWNKGTKV 219
           PKSP+ESWSW K  + T V
Sbjct: 188 PKSPAESWSWRKPTRVTPV 186

The following BLAST results are available for this feature:

BLAST of CmaCh12G005230 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh12G005230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP16	8.6e-125	100.00	uncharacterized protein LOC111495972 OS=Cucurbita maxima OX=3661 GN=LOC111495972...	[more]
A0A6J1GHW9	2.0e-113	97.58	uncharacterized protein LOC111454089 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1C1I1	3.2e-95	85.51	uncharacterized protein LOC111007604 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A1S3BAA9	1.1e-92	82.61	uncharacterized protein LOC103487908 OS=Cucumis melo OX=3656 GN=LOC103487908 PE=...	[more]
A0A0A0LRD5	1.5e-92	82.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360040 PE=4 SV=1	[more]

BLAST of CmaCh12G005230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001944.1	1.8e-124	100.00	uncharacterized protein LOC111495972 [Cucurbita maxima]	[more]
KAG6585650.1	1.8e-113	98.07	hypothetical protein SDJN03_18383, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951160.1	4.1e-113	97.58	uncharacterized protein LOC111454089 [Cucurbita moschata]	[more]
XP_038884891.1	2.7e-96	85.02	uncharacterized protein LOC120075509 [Benincasa hispida]	[more]
XP_022135711.1	6.6e-95	85.51	uncharacterized protein LOC111007604 [Momordica charantia]	[more]

BLAST of CmaCh12G005230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47410.1	2.3e-29	39.70	unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G47410.2	2.3e-29	39.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR36324:SF1	OS09G0460100 PROTEIN	coord: 16..217
None	No IPR available	PANTHER	PTHR36324	OS09G0460100 PROTEIN	coord: 16..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G005230.1	CmaCh12G005230.1	mRNA