CmaCh12G005110 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G005110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Thylakoidal processing peptidase 1
Location	Cma_Chr12: 2635418 .. 2638341 (+)
RNA-Seq Expression	CmaCh12G005110
Synteny	CmaCh12G005110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTCACTTTTCCTGCTTGGGTTCCTCGTGTTTTTCCTCTCTGTTTCCTCTTTCTGATTCTCTTGTGGAAACCGAGAGCTCCCCCTCTTCTCAGATTCCTCTCGTTGACTTCCCCAAAACCCTATCTCCAGTCGTCAATCGCCGATCGATTCTTTGATTTTCAACCACTGGCTTCAACCCCCTCCGATCTGTAGTTTCCGGCTTCAATTTCCCACTTCGGACGCCGATTCTCTGCTTTCCGAAGAAGAAATGGCGTTTCTCGATCACTAGGTTGTCGCGATTATTCTTATCTTGTCTCTGCAACAAACCTGCTTCAAATCCTAATCCACCTACTGAAATTTGCTATCATGGCTATTCGAGTTACCCTCTCCTACTCCGGCTATGTTGCCCAAAACCTAGCTTCATCCACCGGCCTTCGGGCCGGTAACTGCCGCGTTTTTCAGGAGTGTTGGGTCCGATCTTGTATTTTTGGCTCAAGCCATAATCCGGACCTCAAATCTGCTGGAAGCGCGCGCAATTATCGGTCTGATAGCCGGCGGTTTAAGCCGAGTTGTTCTTCTATGTACAGCGCTCTCCCGGGAGAAATGGTTGGGGAAAACCCTAAGAGTCCAATGATTTTGGGTTTGATTTCGATGCTGAAATCGATGGCGTCTGCTTCTGGATCTTCTCCGACCTCCACAGGGATTTTGGGGGTTTCTTCATTTAAAGCCACTTCGATTATCCCCTTTCTACGAGGCTCGAATTGGCTTCCGGGTTACGATATACGATCTCATGTAAGTGGGAGTGATGAGTTTTATGAGAGTGATTTTGAGAAGAGCAGCTGGGTTTCGCGCTTGTTGAATACCTATTCCGATGATGCTAAGGCTCTGTTTACGGCTTTGACTGTTAGTGTGCTCTTTAAATCGTTCTTGGCGGAGCCGAAATCGATTCCTTCTTCTTCCATGTATCCTACTCTGGAAGCAGGGGATCGTGTTTTAGCTGAAAAGGTGACCCTTAGTTCATATAATTGATATCTCTGAATTGAATTGTTGATAATCTTCATATTTGTTGACTGTTTTTACAGTTCTCCACTGATATCTGTTTCTTTTCCTCCTGATATTAGGTTTCATACTTTTTCAGGAAACCTGAAGTTTCTGATATAGTGATCTTCAAACCTCCTAAGATCTTGCAGGTATTAATTCCTTTGATTAATGAGATTCTTTTAAGGAAATTTTCTATTTAGAACTGTTGAATGCTGATATGTTCTTGCATATTTTTTGCACCCCATTTAGGAATTTGGAGTTAGTTCGAGTGAGGTGTTTATTAAGAGAGTTGTGGCTACGTCTGGGGACGTGGTTGAAGTAAGTGTTCTTCAAACTTGTAATATCATTTCTTTAGTATGCAATAATTTTGTGATATGTTCATTTTTCAAAAAGATAGTTCAATTCTTTGCTTTGTTCTCTGATTCATATTGGTTAGCAAATGAGTAAATAACTTATTTGCTTGAACTTCGAGTAACAGCAAAGGCTATGTGATAAGGAATCAACCCAAAGAAAAACTTTGATACCAAATAATAAGGAATCACTACGAGGGAAGTAAGATTCTGTTACCTTGTTGAGCGAATATCTCAAAGCAAGAATACTTGTTTGAGATTTGAATCACCCCACAAGCAAGATCGATTATGTCCCGCTTGAATGATTTTAAACATGTAACCTAAACTATGTAGAATTGCAAAAAAAACTTGGTCTTTGGCTAAAGGAAAAGGTAAGAACACTTAGCCCTAATGATAAGGTAATGACAAAGAATCACTCCAAGGGAAAGTAAAACTCGAATTATCTTGTTGATCAAATATCTCAAGGCAAAAACACTTGATTGAGATTCGAAGCACTCCACAAGCAAGATCGATCATGTCAAGCTTGAATGCTTCTAAACATGCAATCTAAATTACGTAGAATTGCAAATAAACTTAACCCTTGGCTAAAAGAAAGAAAAAATGTTATTTTTAATGCATTTTCCAAGTCTCCTTACAAAGATAACGTACATGGCTTTATATAACTTTAAAATAAAAACTCTTAACCTTCCATGAGGCATTCTAAAGAGTTGTAACTTTCCTACTTTGTGACCATAATGAGTGGTTGTAAGTCAAATATCTGTTGGAGATGAATGGGGAACCAAATATAGTTCCAATATTAGATAGTTCTCGACGCTAATCATTAGTGAAAGAAAGGATTTTCCAATCTTGGTAGTTGCTAACACTCAGACGTTTATTTGTATCCCATCGGCCCATTTTGCGATTTAGATGGTGACATTTAGTCCTATTGTATTAGGATTTAACGTTATGACTTTGACATTAATTATTCGATGCAATGTCGTATGGTAGGTTCGGAATGGGAAATTGGTGGTAAACAGTGTTGTTGAAGATGAGGACTTCATCTTAGAGCCAATTGCTTATGAGATGGATCCAATGGTAATTGTCTTTCCATCTCAACCCTCCCTTTCTCTTTCGAATTCTGATCAATGGGAGAAATAAACAGTTTGCTCGTTTTCTTCTGCAGCTTGTGCCTGAAGGTTATGTGTATGTAATGGGAGACAACCGTAACAATAGTTGTGATTCTCACAACTGGTAAGTTCACCATCTTAGTTCTATATTGCTTTATATTTTGAAACCCAAGGTAGAACTATCAGCCACATAGGCACGTCGTGCTTTACAATTGTCGTAATGCTTTCGTGAGTAGATGAAAACCGGGTGAAGATCAAATACTAGCAATGATAGCCACCATTGTTTCTGATATTATGGTATACCTGTTTCTTTTTATTCTCCAGGGGTCCGCTCCCGGTTGAAAATATCGTAGGAAGATCATTATTCAAGTACTGGCCTCCCCCCAAAGGATCCAGTGTGGTAGATGAACCACATGCAAAGAACATTAATCTGGGGATGTCCTGA

mRNA sequence

TTATTCACTTTTCCTGCTTGGGTTCCTCGTGTTTTTCCTCTCTGTTTCCTCTTTCTGATTCTCTTGTGGAAACCGAGAGCTCCCCCTCTTCTCAGATTCCTCTCGTTGACTTCCCCAAAACCCTATCTCCAGTCGTCAATCGCCGATCGATTCTTTGATTTTCAACCACTGGCTTCAACCCCCTCCGATCTGTAGTTTCCGGCTTCAATTTCCCACTTCGGACGCCGATTCTCTGCTTTCCGAAGAAGAAATGGCGTTTCTCGATCACTAGGTTGTCGCGATTATTCTTATCTTGTCTCTGCAACAAACCTGCTTCAAATCCTAATCCACCTACTGAAATTTGCTATCATGGCTATTCGAGTTACCCTCTCCTACTCCGGCTATGTTGCCCAAAACCTAGCTTCATCCACCGGCCTTCGGGCCGGTAACTGCCGCGTTTTTCAGGAGTGTTGGGTCCGATCTTGTATTTTTGGCTCAAGCCATAATCCGGACCTCAAATCTGCTGGAAGCGCGCGCAATTATCGGTCTGATAGCCGGCGGTTTAAGCCGAGTTGTTCTTCTATGTACAGCGCTCTCCCGGGAGAAATGGTTGGGGAAAACCCTAAGAGTCCAATGATTTTGGGTTTGATTTCGATGCTGAAATCGATGGCGTCTGCTTCTGGATCTTCTCCGACCTCCACAGGGATTTTGGGGGTTTCTTCATTTAAAGCCACTTCGATTATCCCCTTTCTACGAGGCTCGAATTGGCTTCCGGGTTACGATATACGATCTCATGTAAGTGGGAGTGATGAGTTTTATGAGAGTGATTTTGAGAAGAGCAGCTGGGTTTCGCGCTTGTTGAATACCTATTCCGATGATGCTAAGGCTCTGTTTACGGCTTTGACTGTTAGTGTGCTCTTTAAATCGTTCTTGGCGGAGCCGAAATCGATTCCTTCTTCTTCCATGTATCCTACTCTGGAAGCAGGGGATCGTGTTTTAGCTGAAAAGGTTTCATACTTTTTCAGGAAACCTGAAGTTTCTGATATAGTGATCTTCAAACCTCCTAAGATCTTGCAGGAATTTGGAGTTAGTTCGAGTGAGGTGTTTATTAAGAGAGTTGTGGCTACGTCTGGGGACGTGGTTGAAGTTCGGAATGGGAAATTGGTGGTAAACAGTGTTGTTGAAGATGAGGACTTCATCTTAGAGCCAATTGCTTATGAGATGGATCCAATGCTTGTGCCTGAAGGTTATGTGTATGTAATGGGAGACAACCGTAACAATAGTTGTGATTCTCACAACTGGGGTCCGCTCCCGGTTGAAAATATCGTAGGAAGATCATTATTCAAGTACTGGCCTCCCCCCAAAGGATCCAGTGTGGTAGATGAACCACATGCAAAGAACATTAATCTGGGGATGTCCTGA

Coding sequence (CDS)

ATGGCTATTCGAGTTACCCTCTCCTACTCCGGCTATGTTGCCCAAAACCTAGCTTCATCCACCGGCCTTCGGGCCGGTAACTGCCGCGTTTTTCAGGAGTGTTGGGTCCGATCTTGTATTTTTGGCTCAAGCCATAATCCGGACCTCAAATCTGCTGGAAGCGCGCGCAATTATCGGTCTGATAGCCGGCGGTTTAAGCCGAGTTGTTCTTCTATGTACAGCGCTCTCCCGGGAGAAATGGTTGGGGAAAACCCTAAGAGTCCAATGATTTTGGGTTTGATTTCGATGCTGAAATCGATGGCGTCTGCTTCTGGATCTTCTCCGACCTCCACAGGGATTTTGGGGGTTTCTTCATTTAAAGCCACTTCGATTATCCCCTTTCTACGAGGCTCGAATTGGCTTCCGGGTTACGATATACGATCTCATGTAAGTGGGAGTGATGAGTTTTATGAGAGTGATTTTGAGAAGAGCAGCTGGGTTTCGCGCTTGTTGAATACCTATTCCGATGATGCTAAGGCTCTGTTTACGGCTTTGACTGTTAGTGTGCTCTTTAAATCGTTCTTGGCGGAGCCGAAATCGATTCCTTCTTCTTCCATGTATCCTACTCTGGAAGCAGGGGATCGTGTTTTAGCTGAAAAGGTTTCATACTTTTTCAGGAAACCTGAAGTTTCTGATATAGTGATCTTCAAACCTCCTAAGATCTTGCAGGAATTTGGAGTTAGTTCGAGTGAGGTGTTTATTAAGAGAGTTGTGGCTACGTCTGGGGACGTGGTTGAAGTTCGGAATGGGAAATTGGTGGTAAACAGTGTTGTTGAAGATGAGGACTTCATCTTAGAGCCAATTGCTTATGAGATGGATCCAATGCTTGTGCCTGAAGGTTATGTGTATGTAATGGGAGACAACCGTAACAATAGTTGTGATTCTCACAACTGGGGTCCGCTCCCGGTTGAAAATATCGTAGGAAGATCATTATTCAAGTACTGGCCTCCCCCCAAAGGATCCAGTGTGGTAGATGAACCACATGCAAAGAACATTAATCTGGGGATGTCCTGA

Protein sequence

MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRSDSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFKATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS

Homology

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BLAST of CmaCh12G005110 vs. ExPASy Swiss-Prot
Match: O04348 (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2)

HSP 1 Score: 346.7 bits (888), Expect = 3.1e-94
Identity = 190/346 (54.91%), Postives = 245/346 (70.81%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIR+T +YS +VA+NL    G R G      E  VR   F  SH  D            
Sbjct: 1   MAIRITFTYSTHVARNL---VGTRVGPGGYCFESLVRPRFF--SHKRDF----------D 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
            S R +P  +SMY ++  E++GE  +SP+++GLIS+LK   S +G   ++  +LGVSSFK
Sbjct: 61  RSPRNRP--ASMYGSIARELIGEGSQSPLVMGLISILK---STTGHESSTMNVLGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEK------SSWVSRLLNTYSDDAKAL 180
           A+SIIPFL+GS W+    +   V       + D +K      S WV++LL+  S+DAKA 
Sbjct: 121 ASSIIPFLQGSKWIKNPPVIDDVDKGGTVCDDDDDKESRNGGSGWVNKLLSVCSEDAKAA 180

Query: 181 FTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKI 240
           FTA+TVS+LF+S LAEPKSIPS+SMYPTL+ GDRV+AEKVSYFFRKPEVSDIVIFK P I
Sbjct: 181 FTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPI 240

Query: 241 L---QEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVP 300
           L    E+G SS++VFIKR+VA+ GD VEVR+GKL VN +V++EDF+LEP++YEM+PM VP
Sbjct: 241 LLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVP 300

Query: 301 EGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVV 338
           +GYV+V+GDNRN S DSHNWGPLP+ENIVGRS+F+YWPP K S  +
Sbjct: 301 KGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTI 326

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BLAST of CmaCh12G005110 vs. ExPASy Swiss-Prot
Match: Q9M9Z2 (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.1e-94
Identity = 195/360 (54.17%), Postives = 246/360 (68.33%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLR--AGNCRVFQECWVRSCIFGSSHNPDL--KSAGSAR 60
           MAIRVT +YS YVA+++ASS G R   G+ R   E WVR    G +  PD+  KS GS  
Sbjct: 1   MAIRVTFTYSSYVARSIASSAGTRVGTGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNT 60

Query: 61  NYRSDSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGV 120
              S   R +P+ SSMYS +  E++ E  KSP++LG+IS++    +   S  T    LG+
Sbjct: 61  WGPSSGPRARPA-SSMYSTIAREILEEGCKSPLVLGMISLMNLTGAPQFSGMTG---LGI 120

Query: 121 SSFKATSIIPFLRGSNWLP-------GYDIRSHVSG------------SDEFYESDFEKS 180
           S FK +S+IPFLRGS W+P         DI     G            SD+        +
Sbjct: 121 SPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVSNGG---N 180

Query: 181 SWVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYF 240
            WV++LLN  S+DAKA FTA+TVS+LF+S LAEPKSIPS+SM PTL+ GDRV+AEKVSYF
Sbjct: 181 GWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYF 240

Query: 241 FRKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFI 300
           FRKPEVSDIVIFK P IL E G S ++VFIKR+VA+ GD VEV +GKL+VN  V+ EDF+
Sbjct: 241 FRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFV 300

Query: 301 LEPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVV 338
           LEPI YEM+PM VPEGYV+V+GDNRN S DSHNWGPLP++NI+GRS+F+YWPP K S ++
Sbjct: 301 LEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDII 353

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BLAST of CmaCh12G005110 vs. ExPASy Swiss-Prot
Match: Q8H0W1 (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 4.3e-59
Identity = 113/195 (57.95%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 145 GSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLE 204
           G D+      EK+      L+  SDDA+ +F A+ VS+ F+ F+AEP+ IPS SMYPT +
Sbjct: 89  GGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFD 148

Query: 205 AGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGK 264
            GDR++AEKVSY+FRKP  +DIVIFK P +LQE G + ++VFIKR+VA  GD+VEV NGK
Sbjct: 149 VGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGK 208

Query: 265 LVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSL 324
           L+VN V  +E FILEP  YEM P+ VPE  V+VMGDNRNNS DSH WGPLP++NI+GRS+
Sbjct: 209 LMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSV 268

Query: 325 FKYWPPPKGSSVVDE 340
           F+YWPP + S  V E
Sbjct: 269 FRYWPPNRVSGTVLE 283

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BLAST of CmaCh12G005110 vs. ExPASy Swiss-Prot
Match: P72660 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.8e-40
Identity = 80/156 (51.28%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 174 LFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPK 233
           L  AL +++L + F+AEP+ IPS SM PTLE GDR++ EKVSY F  P+V DI++F PP+
Sbjct: 20  LMVALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPE 79

Query: 234 ILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEG 293
           +LQ  G    + FIKRV+A  G  VEV NG +  +     E++ILEP  Y +  + VP+G
Sbjct: 80  LLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDG 139

Query: 294 YVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWP 330
            V+VMGDNRNNS DSH WG LP +NI+G +LF+++P
Sbjct: 140 QVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFP 175

[Close]

BLAST of CmaCh12G005110 vs. ExPASy Swiss-Prot
Match: P73157 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB2 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.3e-35
Identity = 73/183 (39.89%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 165 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 224
           NT+ +  K + TA+ +++  ++F+AE + IPSSSM PTL+  DR++ EK+SY  R PE  
Sbjct: 19  NTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERG 78

Query: 225 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYE 284
           +IV+F P   L+    +  + FIKR++   GD V V  G + VN  + DE++I  P AYE
Sbjct: 79  EIVVFNPTDALK--AKNFHDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYE 138

Query: 285 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKN 344
             P+ VP+    V+GDNRNNS DSH WG +P E ++GR+  ++WP P+   + D+   + 
Sbjct: 139 YGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDDAEREA 198

Query: 345 INL 348
           + +
Sbjct: 199 VEI 199

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BLAST of CmaCh12G005110 vs. ExPASy TrEMBL
Match: A0A6J1KS79 (thylakoidal processing peptidase 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496017 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.7e-196
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180
           ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180

Query: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240
           SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV
Sbjct: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240

Query: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300
           SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD
Sbjct: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300

Query: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS 351
           NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS
Sbjct: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS 350

[Close]

BLAST of CmaCh12G005110 vs. ExPASy TrEMBL
Match: A0A6J1GIT4 (thylakoidal processing peptidase 1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454555 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.8e-193
Identity = 345/350 (98.57%), Postives = 346/350 (98.86%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASAS SSP  TGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASESSPIPTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180
           ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180

Query: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240
           SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV
Sbjct: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240

Query: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300
           SSSEVFIKRVVATSGDVVEVRNGKLVVN VVEDEDFILEPIAYEMDPMLVPEGYVYVMGD
Sbjct: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNGVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300

Query: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS 351
           NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSS+VDEPHAKNINLGMS
Sbjct: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSMVDEPHAKNINLGMS 350

[Close]

BLAST of CmaCh12G005110 vs. ExPASy TrEMBL
Match: A0A6J1GIQ5 (thylakoidal processing peptidase 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454555 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 345/366 (94.26%), Postives = 346/366 (94.54%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASAS SSP  TGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASESSPIPTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHV----------------SGSDEFYESDFEKSSWVSRLL 180
           ATSIIPFLRGSNWLPGYDIRSHV                SGSDEFYESDFEKSSWVSRLL
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSDDVDKGGTVCCDYDESGSDEFYESDFEKSSWVSRLL 180

Query: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240
           NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS
Sbjct: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240

Query: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYE 300
           DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVN VVEDEDFILEPIAYE
Sbjct: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNGVVEDEDFILEPIAYE 300

Query: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKN 351
           MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSS+VDEPHAKN
Sbjct: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSMVDEPHAKN 360

[Close]

BLAST of CmaCh12G005110 vs. ExPASy TrEMBL
Match: A0A6J1CT20 (thylakoidal processing peptidase 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111013959 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.2e-166
Identity = 307/373 (82.31%), Postives = 328/373 (87.94%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQE WVRSCIFGS+HNP+LKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQEFWVRSCIFGSTHNPELKSAGSARNYRS 60

Query: 61  DSRRFKPSCS-----SMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILG 120
           DSRRFKPS S     SMYS L GEMVGENPKSP++LGL+SMLKS+ASASGSS  +TGI G
Sbjct: 61  DSRRFKPSGSMKKPASMYSTLAGEMVGENPKSPVVLGLMSMLKSVASASGSSSITTGIFG 120

Query: 121 VSSFKATSIIPFLRGSNWLPGYDIRSHVS-----------------GSDEFYESDFEKSS 180
            SSFKATSIIPFL+GS WLPGYDIRSHVS                 GS++ YE+DFEKSS
Sbjct: 121 ASSFKATSIIPFLQGSKWLPGYDIRSHVSDDVDKGGGTIVSDYDGIGSNQIYENDFEKSS 180

Query: 181 WVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFF 240
           WVSRLL+TYS+DAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLE GDRVLAEKVSYFF
Sbjct: 181 WVSRLLSTYSEDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEVGDRVLAEKVSYFF 240

Query: 241 RKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFIL 300
           RKPEVSDIV+FK P+ILQE GVSSSEVFIKRVVATSGDVVEV  GKLVVN VV+DEDFIL
Sbjct: 241 RKPEVSDIVVFKAPQILQEIGVSSSEVFIKRVVATSGDVVEVLKGKLVVNGVVQDEDFIL 300

Query: 301 EPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYW-PPPKGSSVV 351
           EPIAYEMDP++VPEGYVYVMGDNRNNSCDSHNWGPL +ENIVGRSLFKYW PPPKGSS+ 
Sbjct: 301 EPIAYEMDPLVVPEGYVYVMGDNRNNSCDSHNWGPLAIENIVGRSLFKYWPPPPKGSSMA 360

[Close]

BLAST of CmaCh12G005110 vs. ExPASy TrEMBL
Match: A0A0A0LNI7 (Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360710 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 288/372 (77.42%), Postives = 317/372 (85.22%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSG+V QNLASSTGLRAGNCRVFQE WVRSCIFGS+HNP+LKS+GSARNYRS
Sbjct: 1   MAIRVTLSYSGHVVQNLASSTGLRAGNCRVFQEFWVRSCIFGSTHNPELKSSGSARNYRS 60

Query: 61  DSRRFKP-----SCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILG 120
           DSRRFKP       ++MYS L GE VGE+PK+PMILGL+SMLKSM     SS  STGI G
Sbjct: 61  DSRRFKPGGSVEKATAMYSTLTGERVGESPKNPMILGLMSMLKSMGD---SSVISTGISG 120

Query: 121 VSSFKATSIIPFLRGSNWLPGYDIRS-----------------HVSGSDEFYESDFEKSS 180
           VSSFKATSIIPFL+GS WLPGYD+RS                   SG+D+FYE+DFEK S
Sbjct: 121 VSSFKATSIIPFLQGSKWLPGYDVRSVSDDVDKGGTTVCYDYYDKSGNDQFYENDFEK-S 180

Query: 181 WVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFF 240
           WVSRLL+TYS+DAKALFTALTVSVLFKSFLAEPKSIPSSSM PTLE GDR+LAEKVSY F
Sbjct: 181 WVSRLLSTYSEDAKALFTALTVSVLFKSFLAEPKSIPSSSMCPTLEVGDRILAEKVSYIF 240

Query: 241 RKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFIL 300
           RKPEVSDIVIFK P+ILQ+FGVSS EVFIKRVVATSGDVVEV+ GKLVVN V +DEDF+L
Sbjct: 241 RKPEVSDIVIFKAPQILQDFGVSSDEVFIKRVVATSGDVVEVQKGKLVVNGVAQDEDFVL 300

Query: 301 EPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVD 351
           EPIAY+M+P+LVPEGYVYVMGDNRNNSCDSHNWGPLP+ENIVGRSLFKYWPP KGS++VD
Sbjct: 301 EPIAYDMEPLLVPEGYVYVMGDNRNNSCDSHNWGPLPIENIVGRSLFKYWPPSKGSAMVD 360

[Close]

BLAST of CmaCh12G005110 vs. NCBI nr
Match: XP_023002003.1 (thylakoidal processing peptidase 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 3.6e-196
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180
           ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180

Query: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240
           SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV
Sbjct: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240

Query: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300
           SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD
Sbjct: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300

Query: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS 351
           NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS
Sbjct: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS 350

[Close]

BLAST of CmaCh12G005110 vs. NCBI nr
Match: XP_022951823.1 (thylakoidal processing peptidase 1, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 684.9 bits (1766), Expect = 3.7e-193
Identity = 345/350 (98.57%), Postives = 346/350 (98.86%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASAS SSP  TGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASESSPIPTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180
           ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTV 180

Query: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240
           SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV
Sbjct: 181 SVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGV 240

Query: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300
           SSSEVFIKRVVATSGDVVEVRNGKLVVN VVEDEDFILEPIAYEMDPMLVPEGYVYVMGD
Sbjct: 241 SSSEVFIKRVVATSGDVVEVRNGKLVVNGVVEDEDFILEPIAYEMDPMLVPEGYVYVMGD 300

Query: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKNINLGMS 351
           NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSS+VDEPHAKNINLGMS
Sbjct: 301 NRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSMVDEPHAKNINLGMS 350

[Close]

BLAST of CmaCh12G005110 vs. NCBI nr
Match: XP_022951822.1 (thylakoidal processing peptidase 1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 674.5 bits (1739), Expect = 5.0e-190
Identity = 345/366 (94.26%), Postives = 346/366 (94.54%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASAS SSP  TGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASESSPIPTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHV----------------SGSDEFYESDFEKSSWVSRLL 180
           ATSIIPFLRGSNWLPGYDIRSHV                SGSDEFYESDFEKSSWVSRLL
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSDDVDKGGTVCCDYDESGSDEFYESDFEKSSWVSRLL 180

Query: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240
           NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS
Sbjct: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240

Query: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYE 300
           DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVN VVEDEDFILEPIAYE
Sbjct: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNGVVEDEDFILEPIAYE 300

Query: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKN 351
           MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSS+VDEPHAKN
Sbjct: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSMVDEPHAKN 360

[Close]

BLAST of CmaCh12G005110 vs. NCBI nr
Match: KAG7020547.1 (Thylakoidal processing peptidase 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 673.3 bits (1736), Expect = 1.1e-189
Identity = 344/366 (93.99%), Postives = 346/366 (94.54%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASAS SSP  TGILGVSSFK
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASESSPIPTGILGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHV----------------SGSDEFYESDFEKSSWVSRLL 180
           ATSIIPFLRGSNWLPGYDIRSHV                SGSDEFYESDFEKSSWVSRLL
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSDDVDKGGTVCCDYDESGSDEFYESDFEKSSWVSRLL 180

Query: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240
           NTY+DDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS
Sbjct: 181 NTYADDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240

Query: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYE 300
           DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVN VVEDEDFILEPIAYE
Sbjct: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNGVVEDEDFILEPIAYE 300

Query: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKN 351
           MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSS+VDEPHAKN
Sbjct: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSMVDEPHAKN 360

[Close]

BLAST of CmaCh12G005110 vs. NCBI nr
Match: XP_023537459.1 (thylakoidal processing peptidase 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 672.2 bits (1733), Expect = 2.5e-189
Identity = 344/366 (93.99%), Postives = 345/366 (94.26%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSH PDLKSAGSARNYRS
Sbjct: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHKPDLKSAGSARNYRS 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
           DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASAS SSP STGILGVSSF 
Sbjct: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASESSPISTGILGVSSFN 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHV----------------SGSDEFYESDFEKSSWVSRLL 180
           ATSIIPFLRGSNWLPGYDIRSHV                SGSDEFYESDFEKSSWVSRLL
Sbjct: 121 ATSIIPFLRGSNWLPGYDIRSHVSDDVDKGGTVCCDYDESGSDEFYESDFEKSSWVSRLL 180

Query: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240
           NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS
Sbjct: 181 NTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVS 240

Query: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYE 300
           DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVN VVEDEDFILEPIAYE
Sbjct: 241 DIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNGVVEDEDFILEPIAYE 300

Query: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVVDEPHAKN 351
           MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSS+VDEPHAKN
Sbjct: 301 MDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSMVDEPHAKN 360

[Close]

BLAST of CmaCh12G005110 vs. TAIR 10
Match: AT2G30440.1 (thylakoid processing peptide )

HSP 1 Score: 346.7 bits (888), Expect = 2.2e-95
Identity = 190/346 (54.91%), Postives = 245/346 (70.81%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLRAGNCRVFQECWVRSCIFGSSHNPDLKSAGSARNYRS 60
           MAIR+T +YS +VA+NL    G R G      E  VR   F  SH  D            
Sbjct: 1   MAIRITFTYSTHVARNL---VGTRVGPGGYCFESLVRPRFF--SHKRDF----------D 60

Query: 61  DSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGVSSFK 120
            S R +P  +SMY ++  E++GE  +SP+++GLIS+LK   S +G   ++  +LGVSSFK
Sbjct: 61  RSPRNRP--ASMYGSIARELIGEGSQSPLVMGLISILK---STTGHESSTMNVLGVSSFK 120

Query: 121 ATSIIPFLRGSNWLPGYDIRSHVSGSDEFYESDFEK------SSWVSRLLNTYSDDAKAL 180
           A+SIIPFL+GS W+    +   V       + D +K      S WV++LL+  S+DAKA 
Sbjct: 121 ASSIIPFLQGSKWIKNPPVIDDVDKGGTVCDDDDDKESRNGGSGWVNKLLSVCSEDAKAA 180

Query: 181 FTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYFFRKPEVSDIVIFKPPKI 240
           FTA+TVS+LF+S LAEPKSIPS+SMYPTL+ GDRV+AEKVSYFFRKPEVSDIVIFK P I
Sbjct: 181 FTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPI 240

Query: 241 L---QEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVP 300
           L    E+G SS++VFIKR+VA+ GD VEVR+GKL VN +V++EDF+LEP++YEM+PM VP
Sbjct: 241 LLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVP 300

Query: 301 EGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVV 338
           +GYV+V+GDNRN S DSHNWGPLP+ENIVGRS+F+YWPP K S  +
Sbjct: 301 KGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTI 326

[Close]

BLAST of CmaCh12G005110 vs. TAIR 10
Match: AT1G06870.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 345.1 bits (884), Expect = 6.5e-95
Identity = 195/360 (54.17%), Postives = 246/360 (68.33%), Query Frame = 0


Query: 1   MAIRVTLSYSGYVAQNLASSTGLR--AGNCRVFQECWVRSCIFGSSHNPDL--KSAGSAR 60
           MAIRVT +YS YVA+++ASS G R   G+ R   E WVR    G +  PD+  KS GS  
Sbjct: 1   MAIRVTFTYSSYVARSIASSAGTRVGTGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNT 60

Query: 61  NYRSDSRRFKPSCSSMYSALPGEMVGENPKSPMILGLISMLKSMASASGSSPTSTGILGV 120
              S   R +P+ SSMYS +  E++ E  KSP++LG+IS++    +   S  T    LG+
Sbjct: 61  WGPSSGPRARPA-SSMYSTIAREILEEGCKSPLVLGMISLMNLTGAPQFSGMTG---LGI 120

Query: 121 SSFKATSIIPFLRGSNWLP-------GYDIRSHVSG------------SDEFYESDFEKS 180
           S FK +S+IPFLRGS W+P         DI     G            SD+        +
Sbjct: 121 SPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVSNGG---N 180

Query: 181 SWVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLEAGDRVLAEKVSYF 240
            WV++LLN  S+DAKA FTA+TVS+LF+S LAEPKSIPS+SM PTL+ GDRV+AEKVSYF
Sbjct: 181 GWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYF 240

Query: 241 FRKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFI 300
           FRKPEVSDIVIFK P IL E G S ++VFIKR+VA+ GD VEV +GKL+VN  V+ EDF+
Sbjct: 241 FRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFV 300

Query: 301 LEPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWPPPKGSSVV 338
           LEPI YEM+PM VPEGYV+V+GDNRN S DSHNWGPLP++NI+GRS+F+YWPP K S ++
Sbjct: 301 LEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDII 353

[Close]

BLAST of CmaCh12G005110 vs. TAIR 10
Match: AT3G24590.1 (plastidic type i signal peptidase 1 )

HSP 1 Score: 229.9 bits (585), Expect = 3.0e-60
Identity = 113/195 (57.95%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 145 GSDEFYESDFEKSSWVSRLLNTYSDDAKALFTALTVSVLFKSFLAEPKSIPSSSMYPTLE 204
           G D+      EK+      L+  SDDA+ +F A+ VS+ F+ F+AEP+ IPS SMYPT +
Sbjct: 89  GGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFD 148

Query: 205 AGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGDVVEVRNGK 264
            GDR++AEKVSY+FRKP  +DIVIFK P +LQE G + ++VFIKR+VA  GD+VEV NGK
Sbjct: 149 VGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGK 208

Query: 265 LVVNSVVEDEDFILEPIAYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLPVENIVGRSL 324
           L+VN V  +E FILEP  YEM P+ VPE  V+VMGDNRNNS DSH WGPLP++NI+GRS+
Sbjct: 209 LMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSV 268

Query: 325 FKYWPPPKGSSVVDE 340
           F+YWPP + S  V E
Sbjct: 269 FRYWPPNRVSGTVLE 283

[Close]

BLAST of CmaCh12G005110 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-13
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 198 SMYPTLE-AGDRVLAEKVSYFFRKPEVSDIVIFKPPKILQEFGVSSSEVFIKRVVATSGD 257
           SM PTL  +G+ +LAE++S  ++KP   DIV+ + P+       + ++  IKRVV   GD
Sbjct: 47  SMIPTLHPSGNMLLAERISKRYQKPSRGDIVVIRSPE-------NPNKTPIKRVVGVEGD 106

Query: 258 VVEVRNGKLVVNSVVEDEDFILEPI-AYEMDPMLVPEGYVYVMGDNRNNSCDSHNWGPLP 317
            +                 F+++P+ + E   ++VP+G+V+V GD  +NS DS N+GP+P
Sbjct: 107 CI----------------SFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVP 154

Query: 318 VENIVGRSLFK 327
              I GR L++
Sbjct: 167 YGLIQGRVLWR 154

[Close]

BLAST of CmaCh12G005110 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-12
Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 174 LFTALTVSVLFKSFLAEPKSIPSSSMYPTLE-AGDRVLAEKVSYFFRKPEVSDIVIFKPP 233
           L+  L V+  +  F+A        SM PTL  +G+ +LAE++S  ++KP   DIV+ + P
Sbjct: 26  LYCFLHVTTNYLGFMAYAY---GPSMTPTLHPSGNVLLAERISKRYQKPSRGDIVVIRSP 85

Query: 234 KILQEFGVSSSEVFIKRVVATSGDVVEVRNGKLVVNSVVEDEDFILEPIAYEMDPMLVPE 293
           +       + ++  IKRV+   GD +       V++S   DE             ++VP+
Sbjct: 86  E-------NPNKTPIKRVIGIEGDCI-----SFVIDSRKSDES----------QTIVVPK 145

Query: 294 GYVYVMGDNRNNSCDSHNWGPLPVENIVGRSLFKYWP 330
           G+V+V GD  +NS DS N+G +P   I GR L++ WP
Sbjct: 146 GHVFVQGDYTHNSRDSRNFGTVPYGLIQGRVLWRVWP 157

The following BLAST results are available for this feature:

BLAST of CmaCh12G005110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04348	3.1e-94	54.91	Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q9M9Z2	9.1e-94	54.17	Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia...	[more]
Q8H0W1	4.3e-59	57.95	Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 S...	[more]
P72660	5.8e-40	51.28	Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX...	[more]
P73157	3.3e-35	39.89	Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX...	[more]

BLAST of CmaCh12G005110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KS79	1.7e-196	100.00	thylakoidal processing peptidase 1, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1GIT4	1.8e-193	98.57	thylakoidal processing peptidase 1, chloroplastic-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1GIQ5	2.4e-190	94.26	thylakoidal processing peptidase 1, chloroplastic-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1CT20	4.2e-166	82.31	thylakoidal processing peptidase 1, chloroplastic-like OS=Momordica charantia OX...	[more]
A0A0A0LNI7	1.6e-154	77.42	Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G3607...	[more]

BLAST of CmaCh12G005110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002003.1	3.6e-196	100.00	thylakoidal processing peptidase 1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022951823.1	3.7e-193	98.57	thylakoidal processing peptidase 1, chloroplastic-like isoform X2 [Cucurbita mos...	[more]
XP_022951822.1	5.0e-190	94.26	thylakoidal processing peptidase 1, chloroplastic-like isoform X1 [Cucurbita mos...	[more]
KAG7020547.1	1.1e-189	93.99	Thylakoidal processing peptidase 1, chloroplastic [Cucurbita argyrosperma subsp....	[more]
XP_023537459.1	2.5e-189	93.99	thylakoidal processing peptidase 1, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]

BLAST of CmaCh12G005110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30440.1	2.2e-95	54.91	thylakoid processing peptide	[more]
AT1G06870.1	6.5e-95	54.17	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT3G24590.1	3.0e-60	57.95	plastidic type i signal peptidase 1	[more]
AT1G23465.1	4.8e-13	34.35	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	1.8e-12	32.48	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 246..258 score: 47.07 coord: 290..309 score: 57.74 coord: 187..203 score: 52.1
IPR000223	Peptidase S26A, signal peptidase I	TIGRFAM	TIGR02227	TIGR02227	coord: 172..329 e-value: 2.0E-38 score: 129.8
IPR000223	Peptidase S26A, signal peptidase I	PANTHER	PTHR43390	SIGNAL PEPTIDASE I	coord: 1..346
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 171..328 e-value: 2.1E-40 score: 138.4
IPR019533	Peptidase S26	CDD	cd06530	S26_SPase_I	coord: 190..322 e-value: 1.08147E-26 score: 99.1971
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 184..343 e-value: 6.1E-36 score: 125.2
None	No IPR available	PANTHER	PTHR43390:SF2	THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED	coord: 1..346
IPR019758	Peptidase S26A, signal peptidase I, conserved site	PROSITE	PS00761	SPASE_I_3	coord: 295..308
IPR019756	Peptidase S26A, signal peptidase I, serine active site	PROSITE	PS00501	SPASE_I_1	coord: 196..203
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 186..335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G005110.1	CmaCh12G005110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005887	integral component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity