CmaCh12G005100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G005100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Dof zinc finger protein
Location	Cma_Chr12: 2631242 .. 2631940 (+)
RNA-Seq Expression	CmaCh12G005100
Synteny	CmaCh12G005100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCGGAATCAGCCAATCCCAACAGAACCAACCGCCCCCAACACACCATGCCCTTCCCTCCCCCGCCCCAATCAGACCCACGCCCCTGCCCTCGCTGCGACTCACTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACGTTCCTGTCGGCGGCGGCTCACGCAAAAACTCCAAACGCTCACGTTATCACAACGCCCCCTCCTCTGCTTCCTCCTCTTCCTCCTCTGTTTCCCTTCTTCCTCCCGCCGCCGCCGCCGTCACTAACGACATTAACGTCAATCTCAACGATACCATGTCCGGTCCTGCCACTTTCACTTCTCTCTTGAGCTCACAGGGACCCGGGTTTTTGGCTCTTGGTGGATACGGGTCAGGATCCGGGTCGGCTCATGCCCCTGCAGCTTTTGACGAAATGGGGTTCGGCTTAGGCAGGGGATTATGGGATACCGCTTGTACTTACACTGAAGTTGGGGATCTCGTCGGAGCTCCGGAGACGTCGTCGTCTGGATACAACACGTGGCAGATGAATGACACCAATGGCGACGGCGCTGGCGGCGGAGTTGTCGACGGCGATTTGCTGAATTGGCCGGACCTTGCCATTTCCATGCAAGGCAAGAGCTTGAAGTAA

mRNA sequence

ATGCCGTCGGAATCAGCCAATCCCAACAGAACCAACCGCCCCCAACACACCATGCCCTTCCCTCCCCCGCCCCAATCAGACCCACGCCCCTGCCCTCGCTGCGACTCACTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACGTTCCTGTCGGCGGCGGCTCACGCAAAAACTCCAAACGCTCACGTTATCACAACGCCCCCTCCTCTGCTTCCTCCTCTTCCTCCTCTGTTTCCCTTCTTCCTCCCGCCGCCGCCGCCGTCACTAACGACATTAACGTCAATCTCAACGATACCATGTCCGGTCCTGCCACTTTCACTTCTCTCTTGAGCTCACAGGGACCCGGGTTTTTGGCTCTTGGTGGATACGGGTCAGGATCCGGGTCGGCTCATGCCCCTGCAGCTTTTGACGAAATGGGGTTCGGCTTAGGCAGGGGATTATGGGATACCGCTTGTACTTACACTGAAGTTGGGGATCTCGTCGGAGCTCCGGAGACGTCGTCGTCTGGATACAACACGTGGCAGATGAATGACACCAATGGCGACGGCGCTGGCGGCGGAGTTGTCGACGGCGATTTGCTGAATTGGCCGGACCTTGCCATTTCCATGCAAGGCAAGAGCTTGAAGTAA

Coding sequence (CDS)

ATGCCGTCGGAATCAGCCAATCCCAACAGAACCAACCGCCCCCAACACACCATGCCCTTCCCTCCCCCGCCCCAATCAGACCCACGCCCCTGCCCTCGCTGCGACTCACTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACGTTCCTGTCGGCGGCGGCTCACGCAAAAACTCCAAACGCTCACGTTATCACAACGCCCCCTCCTCTGCTTCCTCCTCTTCCTCCTCTGTTTCCCTTCTTCCTCCCGCCGCCGCCGCCGTCACTAACGACATTAACGTCAATCTCAACGATACCATGTCCGGTCCTGCCACTTTCACTTCTCTCTTGAGCTCACAGGGACCCGGGTTTTTGGCTCTTGGTGGATACGGGTCAGGATCCGGGTCGGCTCATGCCCCTGCAGCTTTTGACGAAATGGGGTTCGGCTTAGGCAGGGGATTATGGGATACCGCTTGTACTTACACTGAAGTTGGGGATCTCGTCGGAGCTCCGGAGACGTCGTCGTCTGGATACAACACGTGGCAGATGAATGACACCAATGGCGACGGCGCTGGCGGCGGAGTTGTCGACGGCGATTTGCTGAATTGGCCGGACCTTGCCATTTCCATGCAAGGCAAGAGCTTGAAGTAA

Protein sequence

MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLNDTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK

Homology

[Close]

BLAST of CmaCh12G005100 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-39
Identity = 108/260 (41.54%), Postives = 147/260 (56.54%), Query Frame = 0


Query: 3   SESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRY 62
           S+S  P R     + +  P   Q +  PCPRCDS NTKFCYYNNYN SQPRHFCK+CRRY
Sbjct: 4   SDSGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRY 63

Query: 63  WTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSAS-----SSSSSVSLLPPAA----AAVTN 122
           WTHGGTLRDVPVGGG+RK++KRSR  +  SS+S     S+S+ V L         ++++N
Sbjct: 64  WTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISN 123

Query: 123 DINVNLNDT------MSGPATFTSLL--------SSQGPG-FLALGGYGSGSGSAHAPAA 182
            +   + ++      +S   +FTS L        ++ G G  + +GG+G G GS      
Sbjct: 124 GVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGS-----G 183

Query: 183 FDEMGFGLGRGLWDTACTYTEVGDLVGAPETSSSGYN------TWQMNDTNGDGAGGGVV 233
           FD++ FGLGR +W     ++ VG        S+ G++      TWQ      + AGGG V
Sbjct: 184 FDDVSFGLGRAMW----PFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESN-AGGGFV 243

[Close]

BLAST of CmaCh12G005100 vs. ExPASy Swiss-Prot
Match: Q9SX97 (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 100/233 (42.92%), Postives = 127/233 (54.51%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSE      T     T  +PPP  ++P PCPRC+S  TKFCYYNNYNL+QPR++CKSCR
Sbjct: 1   MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRK-NSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNL 120
           RYWT GGTLRDVPVGGG+R+ +SKR R  +  +++SSSSSSV        A T      +
Sbjct: 61  RYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQTKV 120

Query: 121 NDTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTE 180
            + +SG  +F SLL           G GSG+G         + GFG G GL + +  Y  
Sbjct: 121 TNLISGHGSFASLL-----------GLGSGNGGL-------DYGFGYGYGLEEMSIGYLG 180

Query: 181 VGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
              +   P     G +TWQ+ +  G         GD L WP L ISMQ   +K
Sbjct: 181 DSSVGEIPVVDGCGGDTWQIGEIEGKSG------GDSLIWPGLEISMQTNDVK 209

[Close]

BLAST of CmaCh12G005100 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 7.1e-26
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 71  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPAAAAVTNDINVNLNDTM 124
           K+ +  N  SS+SSS  SSSV+   P++  +  +     + T+
Sbjct: 131 KKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTL 173

[Close]

BLAST of CmaCh12G005100 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 65/133 (48.87%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 21  PPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRK 80
           P P   +   CPRCDS NTKFCYYNNY++SQPR+FCK+CRRYWTHGGTLR+VP+GGG RK
Sbjct: 52  PRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRK 111

Query: 81  NSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNL------NDTMSGPATFTSLLS 140
           N   SR+     ++SSSS++ + L P+  A ++++++N       N TM  P T   L  
Sbjct: 112 NKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPTPTTM-GLFP 171

Query: 141 SQGPGFLALGGYG 148
           +  P  +  GG G
Sbjct: 172 NVLPTLMPTGGGG 183

[Close]

BLAST of CmaCh12G005100 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-24
Identity = 70/144 (48.61%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP   P+ CPRC+S +TKFCYYNNY+LSQPR+FCK+CRRYWT GGTLR++PVGGG RKN 
Sbjct: 67  PPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 126

Query: 83  KRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLNDTMSGPATFTSLLSSQGPGFLA 142
           K       PSS++SSSS+ S   P     +N +  N +D M+   +  +   S   GF  
Sbjct: 127 K-------PSSSNSSSSTSSGKKP-----SNIVTANTSDLMALAHSHQNYQHSP-LGFSH 186

Query: 143 LGG-YGSGSGSAHAPAAFDEMGFG 166
            GG  GS S   H    F E  +G
Sbjct: 187 FGGMMGSYSTPEHGNVGFLESKYG 197

[Close]

BLAST of CmaCh12G005100 vs. ExPASy TrEMBL
Match: A0A6J1KP87 (dof zinc finger protein DOF1.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496024 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232

[Close]

BLAST of CmaCh12G005100 vs. ExPASy TrEMBL
Match: A0A6J1GJZ2 (dof zinc finger protein DOF1.6-like OS=Cucurbita moschata OX=3662 GN=LOC111454557 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.6e-126
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPP  AAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPP-TAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQG GFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 231

[Close]

BLAST of CmaCh12G005100 vs. ExPASy TrEMBL
Match: A0A5A7VDC0 (Dof zinc finger protein DOF1.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006160 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 191/255 (74.90%), Postives = 201/255 (78.82%), Query Frame = 0


Query: 1   MPSESANPNRTN-RPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60
           MPSES+N N +  +PQHTM FPPPPQSDP PCPRCDSLNTKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYH---NAPSSAS-------------SSSSSVSL 120
           RRYWTHGGTLRDVPVGGGSRKNSKRSRYH   N PSS S             SSSSSVSL
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 LPPAAAAVTNDINVNLNDTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMG 180
           LP A     N +N ++NDT+  P TFTSLLSSQ  GFLALGGY SGSGS HAPAAFD+MG
Sbjct: 121 LPTA-----NALNNDINDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMG 180

Query: 181 FGLGRGLWDTACTYTEVGDLV------GAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLL 233
           F LGRGLW TAC Y EVGDLV      GAPETSSSGYNTWQMN T+G G  GGVVDGDLL
Sbjct: 181 FALGRGLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDG-GGNGGVVDGDLL 240

[Close]

BLAST of CmaCh12G005100 vs. ExPASy TrEMBL
Match: A0A0A0LKY9 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360720 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 190/255 (74.51%), Postives = 200/255 (78.43%), Query Frame = 0


Query: 1   MPSESANPNRTN-RPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60
           MPSES+N N +  +PQHTM FPPPPQSDP PCPRCDSLNTKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYH---NAPSSAS-------------SSSSSVSL 120
           RRYWTHGGTLRDVPVGGGSRKNSKRSRYH   N PSS S             SSSSSVSL
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 LPPAAAAVTNDINVNLNDTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMG 180
           LP A     N +N ++NDT+  P TFTSLLSSQ  GFLALGGY SGSGS HAPAAFD+MG
Sbjct: 121 LPTA-----NALNSDINDTIPAPGTFTSLLSSQASGFLALGGYASGSGSGHAPAAFDDMG 180

Query: 181 FGLGRGLWDTACTYTEVGDLV------GAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLL 233
           F LGRGLW TAC Y EVGDLV      GAPETSSSGYNTWQMN  +G G  GGVVDGDLL
Sbjct: 181 FALGRGLWGTACPYPEVGDLVGSYATGGAPETSSSGYNTWQMNANDG-GGNGGVVDGDLL 240

[Close]

BLAST of CmaCh12G005100 vs. ExPASy TrEMBL
Match: A0A1S3BAC9 (dof zinc finger protein DOF1.6-like OS=Cucumis melo OX=3656 GN=LOC103487930 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 191/255 (74.90%), Postives = 201/255 (78.82%), Query Frame = 0


Query: 1   MPSESANPNRTN-RPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60
           MPSES+N N +  +PQHTM FPPPPQSDP PCPRCDSLNTKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYH---NAPSSAS-------------SSSSSVSL 120
           RRYWTHGGTLRDVPVGGGSRKNSKRSRYH   N PSS S             SSSSSVSL
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 LPPAAAAVTNDINVNLNDTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMG 180
           LP A     N +N ++NDT+  P TFTSLLSSQ  GFLALGGY SGSGS HAPAAFD+MG
Sbjct: 121 LPTA-----NALNNDINDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMG 180

Query: 181 FGLGRGLWDTACTYTEVGDLV------GAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLL 233
           F LGRGLW TAC Y EVGDLV      GAPETSSSGYNTWQMN T+G G  GGVVDGDLL
Sbjct: 181 FALGRGLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDG-GGNGGVVDGDLL 240

[Close]

BLAST of CmaCh12G005100 vs. NCBI nr
Match: XP_023002014.1 (dof zinc finger protein DOF1.6-like [Cucurbita maxima])

HSP 1 Score: 472.2 bits (1214), Expect = 2.5e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232

[Close]

BLAST of CmaCh12G005100 vs. NCBI nr
Match: XP_023537460.1 (dof zinc finger protein DOF1.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.4 bits (1204), Expect = 3.6e-128
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQG GFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GD+VGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDIVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232

[Close]

BLAST of CmaCh12G005100 vs. NCBI nr
Match: KAG7020546.1 (Dof zinc finger protein DOF3.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 467.6 bits (1202), Expect = 6.2e-128
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPA AAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAVAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQG GFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232

[Close]

BLAST of CmaCh12G005100 vs. NCBI nr
Match: KAG6585637.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.5 bits (1199), Expect = 1.4e-127
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPA AAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAVAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQG GFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GDLVGAP+TSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPDTSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232

[Close]

BLAST of CmaCh12G005100 vs. NCBI nr
Match: XP_022951825.1 (dof zinc finger protein DOF1.6-like [Cucurbita moschata])

HSP 1 Score: 461.8 bits (1187), Expect = 3.4e-126
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPP  AAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPP-TAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQG GFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
           GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 231

[Close]

BLAST of CmaCh12G005100 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-40
Identity = 108/260 (41.54%), Postives = 147/260 (56.54%), Query Frame = 0


Query: 3   SESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRY 62
           S+S  P R     + +  P   Q +  PCPRCDS NTKFCYYNNYN SQPRHFCK+CRRY
Sbjct: 4   SDSGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRY 63

Query: 63  WTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSAS-----SSSSSVSLLPPAA----AAVTN 122
           WTHGGTLRDVPVGGG+RK++KRSR  +  SS+S     S+S+ V L         ++++N
Sbjct: 64  WTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISN 123

Query: 123 DINVNLNDT------MSGPATFTSLL--------SSQGPG-FLALGGYGSGSGSAHAPAA 182
            +   + ++      +S   +FTS L        ++ G G  + +GG+G G GS      
Sbjct: 124 GVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGS-----G 183

Query: 183 FDEMGFGLGRGLWDTACTYTEVGDLVGAPETSSSGYN------TWQMNDTNGDGAGGGVV 233
           FD++ FGLGR +W     ++ VG        S+ G++      TWQ      + AGGG V
Sbjct: 184 FDDVSFGLGRAMW----PFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESN-AGGGFV 243

[Close]

BLAST of CmaCh12G005100 vs. TAIR 10
Match: AT1G47655.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 100/233 (42.92%), Postives = 127/233 (54.51%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSE      T     T  +PPP  ++P PCPRC+S  TKFCYYNNYNL+QPR++CKSCR
Sbjct: 1   MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRK-NSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNL 120
           RYWT GGTLRDVPVGGG+R+ +SKR R  +  +++SSSSSSV        A T      +
Sbjct: 61  RYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQTKV 120

Query: 121 NDTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTE 180
            + +SG  +F SLL           G GSG+G         + GFG G GL + +  Y  
Sbjct: 121 TNLISGHGSFASLL-----------GLGSGNGGL-------DYGFGYGYGLEEMSIGYLG 180

Query: 181 VGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 233
              +   P     G +TWQ+ +  G         GD L WP L ISMQ   +K
Sbjct: 181 DSSVGEIPVVDGCGGDTWQIGEIEGKSG------GDSLIWPGLEISMQTNDVK 209

[Close]

BLAST of CmaCh12G005100 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-27
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 71  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPAAAAVTNDINVNLNDTM 124
           K+ +  N  SS+SSS  SSSV+   P++  +  +     + T+
Sbjct: 131 KKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTL 173

[Close]

BLAST of CmaCh12G005100 vs. TAIR 10
Match: AT1G07640.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-27
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 15  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 74

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPAAAAVTNDINVNLNDTM 124
           K+ +  N  SS+SSS  SSSV+   P++  +  +     + T+
Sbjct: 75  KKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTL 117

[Close]

BLAST of CmaCh12G005100 vs. TAIR 10
Match: AT1G07640.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-27
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 79  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 138

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPAAAAVTNDINVNLNDTM 124
           K+ +  N  SS+SSS  SSSV+   P++  +  +     + T+
Sbjct: 139 KKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTL 181

The following BLAST results are available for this feature:

BLAST of CmaCh12G005100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39088	3.3e-39	41.54	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9SX97	2.8e-38	42.92	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV...	[more]
Q8L9V6	7.1e-26	57.28	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
O24463	2.1e-25	48.87	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
Q9FM03	2.3e-24	48.61	Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV...	[more]

BLAST of CmaCh12G005100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP87	1.2e-129	100.00	dof zinc finger protein DOF1.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496024 ...	[more]
A0A6J1GJZ2	1.6e-126	98.71	dof zinc finger protein DOF1.6-like OS=Cucurbita moschata OX=3662 GN=LOC11145455...	[more]
A0A5A7VDC0	1.4e-93	74.90	Dof zinc finger protein DOF1.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0LKY9	1.4e-93	74.51	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360720 PE...	[more]
A0A1S3BAC9	1.4e-93	74.90	dof zinc finger protein DOF1.6-like OS=Cucumis melo OX=3656 GN=LOC103487930 PE=4...	[more]

BLAST of CmaCh12G005100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002014.1	2.5e-129	100.00	dof zinc finger protein DOF1.6-like [Cucurbita maxima]	[more]
XP_023537460.1	3.6e-128	99.14	dof zinc finger protein DOF1.6-like [Cucurbita pepo subsp. pepo]	[more]
KAG7020546.1	6.2e-128	99.14	Dof zinc finger protein DOF3.4, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6585637.1	1.4e-127	98.71	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022951825.1	3.4e-126	98.71	dof zinc finger protein DOF1.6-like [Cucurbita moschata]	[more]

BLAST of CmaCh12G005100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50410.1	2.3e-40	41.54	OBF binding protein 1	[more]
AT1G47655.1	2.0e-39	42.92	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.2	5.0e-27	57.28	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.1	5.0e-27	57.28	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.3	5.0e-27	57.28	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 28..83 e-value: 4.3E-33 score: 113.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 31..67
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 29..83 score: 29.180101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR31992:SF189	SUBFAMILY NOT NAMED	coord: 1..227
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G005100.1	CmaCh12G005100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000166	nucleotide binding