CmaCh12G004150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G004150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	auxin-responsive protein SAUR50-like
Location	Cma_Chr12: 2153158 .. 2153505 (-)
RNA-Seq Expression	CmaCh12G004150
Synteny	CmaCh12G004150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGTCCAACAGACTGTCACAGGCGGCGGTGGTCAAGCAAATTATGAAGCGATGTTCCAGTTTAAGAAATAAAAAAACTCACCAATGCGGCGGCGCTGGCGGCGGCGGCGGAGGAGATATCCCGGTGGATGTACCTAAAGGCCATTTTGTGGTGTATGTGGGTGAGAATAGAAGCCGGTACATTGTGCCGGTGACGTTTCTGTCGACGCCGGAGTTTCAGATTCTTCTCCAATTGGCTGAGGAAGAGTTCGGGTTTAGTCACCATATGGGCCTCACTATCCCGTGTGACGAGAAGGTTTTTCAGTCGCTACTCCGAACGATCGAGTCGAACCGAGCCGAATGA

mRNA sequence

ATGGCGGTGTCCAACAGACTGTCACAGGCGGCGGTGGTCAAGCAAATTATGAAGCGATGTTCCAGTTTAAGAAATAAAAAAACTCACCAATGCGGCGGCGCTGGCGGCGGCGGCGGAGGAGATATCCCGGTGGATGTACCTAAAGGCCATTTTGTGGTGTATGTGGGTGAGAATAGAAGCCGGTACATTGTGCCGGTGACGTTTCTGTCGACGCCGGAGTTTCAGATTCTTCTCCAATTGGCTGAGGAAGAGTTCGGGTTTAGTCACCATATGGGCCTCACTATCCCGTGTGACGAGAAGGTTTTTCAGTCGCTACTCCGAACGATCGAGTCGAACCGAGCCGAATGA

Coding sequence (CDS)

ATGGCGGTGTCCAACAGACTGTCACAGGCGGCGGTGGTCAAGCAAATTATGAAGCGATGTTCCAGTTTAAGAAATAAAAAAACTCACCAATGCGGCGGCGCTGGCGGCGGCGGCGGAGGAGATATCCCGGTGGATGTACCTAAAGGCCATTTTGTGGTGTATGTGGGTGAGAATAGAAGCCGGTACATTGTGCCGGTGACGTTTCTGTCGACGCCGGAGTTTCAGATTCTTCTCCAATTGGCTGAGGAAGAGTTCGGGTTTAGTCACCATATGGGCCTCACTATCCCGTGTGACGAGAAGGTTTTTCAGTCGCTACTCCGAACGATCGAGTCGAACCGAGCCGAATGA

Protein sequence

MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE

Homology

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BLAST of CmaCh12G004150 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30
Identity = 70/110 (63.64%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGD-IPVDVPKGHFVVYVGENR 60
           M  +++L+Q A++KQI+KRCSSL  K        GGG   D +P+DVPKGHF VYVGENR
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKN-------GGGYDEDCLPLDVPKGHFPVYVGENR 63

Query: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTI 110
           SRYIVP++FL+ PEFQ LLQ AEEEFGF H MGLTIPCDE VFQ+L   I
Sbjct: 64  SRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of CmaCh12G004150 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 64/99 (64.65%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 8   SQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYIVPVT 67
           SQAA +KQI+KRCSSLR  K     G       D+P DVPKGHF VYVG NRSRYIVP++
Sbjct: 12  SQAASIKQIVKRCSSLRKMK--NVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPIS 71

Query: 68  FLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLL 107
           +L   EFQ LL+LAEEEFGF H MGLTIPCDE  F+SL+
Sbjct: 72  WLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLI 108

[Close]

BLAST of CmaCh12G004150 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.8e-21
Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 4   SNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYI 63
           S++ +QA  +K+I+K+CSS          G      G +P DVPKGHFVVYVGE R+RYI
Sbjct: 7   SHKQTQALAIKKIIKKCSSF---------GKNNDDSG-LPNDVPKGHFVVYVGERRNRYI 66

Query: 64  VPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTI 110
           VP++ L  P FQ LLQ +EEEFGF+H MG+ IPC E  F S    I
Sbjct: 67  VPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of CmaCh12G004150 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.6e-15
Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 44  VDVPKGHFVVYVGENRSRYIVPVTFLSTPEFQILLQLAEEEFGFSHHM-GLTIPCDEKVF 103
           VD PKG+  VYVGE   R+++PV++++ P FQ LL  AEEEFG+ H M GLTIPC E+VF
Sbjct: 15  VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVF 74

Query: 104 QSL 106
           Q +
Sbjct: 75  QRI 77

[Close]

BLAST of CmaCh12G004150 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 45  DVPKGHFVVYVGENRSRYIVPVTFLSTPEFQILLQLAEEEFGFSHHM-GLTIPCDEKVFQ 104
           D PKG+  VYVGE   R+++PV++L+ P FQ LL  AEEEFG+ H M GLTIPC E VFQ
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 105 SL 106
            +
Sbjct: 76  CI 77

[Close]

BLAST of CmaCh12G004150 vs. ExPASy TrEMBL
Match: A0A6J1KJU9 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.6e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 116
           RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE
Sbjct: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 115

[Close]

BLAST of CmaCh12G004150 vs. ExPASy TrEMBL
Match: A0A6J1GIF7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111454508 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAV++RLSQAAVVKQIMKRCSSLRNKKTHQCGGA   GGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLRNKKTHQCGGA---GGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 116
           RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLR+IESN+ E
Sbjct: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRSIESNQTE 112

[Close]

BLAST of CmaCh12G004150 vs. ExPASy TrEMBL
Match: A0A6J1K8F3 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37
Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 11  AVVKQIMKRCSSLRNKKTH----QCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYIVPV 70
           AVVKQIMKRCS LR+ K      QCGG GGGG G+IPVDVPKGHFVVYV ENRSRYIVP+
Sbjct: 2   AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGTGEIPVDVPKGHFVVYVSENRSRYIVPL 61

Query: 71  TFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 106
           T L++PEFQILLQLAEEEFGFSHHMGLTIPC+E+VFQSL
Sbjct: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSL 100

[Close]

BLAST of CmaCh12G004150 vs. ExPASy TrEMBL
Match: A0A6J1HE76 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111462673 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-36
Identity = 81/105 (77.14%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 11  AVVKQIMKRCSSLRNKKTH----QCGGAGGGGG------GDIPVDVPKGHFVVYVGENRS 70
           AVVKQIMKRCS LR+ K      QCGG GGGGG      G+IPVDVPKGHFVVYV ENRS
Sbjct: 2   AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRS 61

Query: 71  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 106
           RYIVP+T L++PEFQILLQLAEEEFGFSHHMGLTIPC+E+VFQSL
Sbjct: 62  RYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSL 106

[Close]

BLAST of CmaCh12G004150 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 83/115 (72.17%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLR---------NKKTH-QCGGAGGGGGGDIPVDVPKGH 60
           MAVS +L+  AVVKQI KRCSSLR         N  TH QC     GGG +IPVDVPKGH
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQC-----GGGEEIPVDVPKGH 60

Query: 61  FVVYVGENRSRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 106
           FVVYV ENRSRYIVP+TFL+ PEFQILLQLAEEEFGFSH+MGLTIPC+E+VFQSL
Sbjct: 61  FVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSL 110

[Close]

BLAST of CmaCh12G004150 vs. NCBI nr
Match: XP_023002557.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 7.4e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 116
           RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE
Sbjct: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 115

[Close]

BLAST of CmaCh12G004150 vs. NCBI nr
Match: XP_022951771.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 4.7e-52
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAV++RLSQAAVVKQIMKRCSSLRNKKTHQCGGA   GGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLRNKKTHQCGGA---GGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 116
           RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLR+IESN+ E
Sbjct: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRSIESNQTE 112

[Close]

BLAST of CmaCh12G004150 vs. NCBI nr
Match: XP_023538452.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 106/115 (92.17%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAV++RLSQAAVVKQIMKRCSSLRNKK+HQCGGA   GGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLRNKKSHQCGGA---GGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 116
           RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLR+IESN+ E
Sbjct: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRSIESNQTE 112

[Close]

BLAST of CmaCh12G004150 vs. NCBI nr
Match: KAG6585548.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAV++RLSQAAVVKQIMKRCSSLRNKKTHQCGGA   GGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLRNKKTHQCGGA---GGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTIESNRAE 116
           RYIVPVTFLST EFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLR+IESNR E
Sbjct: 61  RYIVPVTFLSTSEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRSIESNRTE 112

[Close]

BLAST of CmaCh12G004150 vs. NCBI nr
Match: KAG7020460.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           MAV++RLSQAAVVKQIMKRCSSLRNKKTHQCGGA   GGGDIPVDVPKGHFVVYVGENRS
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLRNKKTHQCGGA---GGGDIPVDVPKGHFVVYVGENRS 60

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEK 101
           RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEK
Sbjct: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEK 97

[Close]

BLAST of CmaCh12G004150 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.0 bits (336), Expect = 7.5e-32
Identity = 65/105 (61.90%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRS 60
           M  +N+L+Q A++KQI+KRCSSL  K+++  G    G     P++VPKGHFVVYVGENR 
Sbjct: 3   MKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGS----PLNVPKGHFVVYVGENRV 62

Query: 61  RYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 106
           RY+VP++FL+ PEFQ+LLQ AEEEFGF H MGLTIPC+E VF+SL
Sbjct: 63  RYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSL 103

[Close]

BLAST of CmaCh12G004150 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 133.7 bits (335), Expect = 9.7e-32
Identity = 70/110 (63.64%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 1   MAVSNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGD-IPVDVPKGHFVVYVGENR 60
           M  +++L+Q A++KQI+KRCSSL  K        GGG   D +P+DVPKGHF VYVGENR
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKN-------GGGYDEDCLPLDVPKGHFPVYVGENR 63

Query: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTI 110
           SRYIVP++FL+ PEFQ LLQ AEEEFGF H MGLTIPCDE VFQ+L   I
Sbjct: 64  SRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of CmaCh12G004150 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-31
Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 1   MAVSNR--LSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGEN 60
           MA+ NR  L+Q  ++KQI+KRCSSL  K++ +        G  +P+DVPKGHFVVYVG N
Sbjct: 1   MAIINRSKLTQTTMIKQILKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYVGGN 60

Query: 61  RSRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTI 110
           R RY++P++FL+ PEFQ+LLQ AEEEFGF H+MGLTIPC+E  F+SL+ ++
Sbjct: 61  RVRYVLPISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSM 111

[Close]

BLAST of CmaCh12G004150 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.1 bits (318), Expect = 9.1e-30
Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 4   SNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYI 63
           S++L+Q A++KQI+KRCSSL     +QC    G     +PVDVPKGHF VYVGE RSRYI
Sbjct: 6   SSKLTQTAMLKQILKRCSSLAK---NQCYDEDG-----LPVDVPKGHFPVYVGEKRSRYI 65

Query: 64  VPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTI 110
           VP++FL+ P+F+ LLQ AEEEFGF+H MGLTIPC+E VF+SL   I
Sbjct: 66  VPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of CmaCh12G004150 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29
Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 4   SNRLSQAAVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYI 63
           S +L+Q A+++QI+KRCSSL  K      G GG    D+P+DVPKGHF VYVG NRSRYI
Sbjct: 7   STKLAQTAMLRQILKRCSSLGKK-----NGGGGYEEVDLPLDVPKGHFPVYVGHNRSRYI 66

Query: 64  VPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRTI 110
           VP++FL+  +FQ LL+ AEEEFGF H MGLTIPCDE  FQ L   I
Sbjct: 67  VPISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTSMI 107

The following BLAST results are available for this feature:

BLAST of CmaCh12G004150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.4e-30	63.64	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	1.1e-27	64.65	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	5.8e-21	50.94	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33082	3.6e-15	57.14	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	1.1e-14	58.06	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmaCh12G004150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJU9	3.6e-58	100.00	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367...	[more]
A0A6J1GIF7	2.3e-52	93.04	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114545...	[more]
A0A6J1K8F3	2.7e-37	80.81	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083...	[more]
A0A6J1HE76	3.0e-36	77.14	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A0A0LRM7	1.2e-34	72.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1	[more]

BLAST of CmaCh12G004150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002557.1	7.4e-58	100.00	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_022951771.1	4.7e-52	93.04	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]
XP_023538452.1	1.4e-51	92.17	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
KAG6585548.1	1.4e-51	93.04	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7020460.1	2.5e-45	95.00	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of CmaCh12G004150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75580.1	7.5e-32	61.90	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	9.7e-32	63.64	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	1.7e-31	56.76	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	9.1e-30	61.32	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	1.2e-29	60.38	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 30..108 e-value: 8.3E-27 score: 93.2
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 5..106
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 5..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G004150.1	CmaCh12G004150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin