CmaCh12G002540 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G002540
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTranslation initiation factor IF-2
LocationCma_Chr12: 1290000 .. 1294647 (-)
RNA-Seq ExpressionCmaCh12G002540
SyntenyCmaCh12G002540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAGGGACGCAGCTGTCAGCCCAACAGCAACATTTGGGTTAAAAGCCCAAAACATTCACCCGAACCCAGCCCAAGATGGGCAAGGGACGCAGCTGTCAGCCCAATCGGCCCAGGAAAGGCAACATCTGGGCTAAAAAGCCCAAAATTTTCACCCGAATCCAGCCCCAAGGTGGGCCAGGGACGCAATTGTCAGCCCAATCGGCCCACAATAGGCAAAATTTGGGCTAAAAAGCCCAAAATATTCACCCGAACCCAGCCCCGAGGTGGGCAAGGGACGCAATTGTCAGCCCAATTGGCCCACAATAGGCAACATTTGAGCTAAAAAGCCCAAAATATTCACCCCGAACCCAGCCCAAGGTGGGCAAGGGTGGCGCGTCAGTCCACTGGGCCCACAATAGGTAACATTGGGCCAAAAGCCCAAAACATTCACCCAAACCTAGCCCAAGGTGGGCAAGGGACGTAGCTGTCAGCCCAATTGGCCCACAATAGGCGACATTTGGGCCAAAAGCCCAAAATATTCACCTGAACCCAGTCCAATATATATATCATTATATACATACATATATATTGCGTTAAAAAAATGGTAAAAACAAAAAGATTAATATTTATACTGTACCATGTGGGGCAACGTGAAAGTTAGCGACGGCAGTTATTCCGCTTTTCCTTCCGACAACCTTTCTCGTATTCTGCACAAAAAAAGAAAAAAAAGAAAAGAGGAATTCGTTGACGCCGTAACGGAAAGTGAGGCTTAAGCGTTTATTTGCCTTGAGGACAAAACCGTCTTTTCACACCCTCTAACCGGACCCTTTAAAGAAAAAAAAAAAAAAAAAAAAAAAAGAAGTTTTTTGCTCTTCACCTGCTAAAATTACCCTGAAATTGCTGGTTAAAACCAAAAACAACCAATTTAATTGGCGGAATTTTGATACTTCTTGTTCACATTTATTTTTATTATCTTATTCTGAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAAAAAAGGACAGTAAGAAGAAGAACGAGGAAGACGAGAGGAAGAACAACATTGATTCTGTTGATAAAAATAGTCAAAATTTTAAGCAAAAGCAGAAGCCCATTATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTACCCATTTAGCAAAATTTAAGGTTTATTATTGCCTGATTCAGATTTAGCTTCCGCGAATTGGGGATTTTGTGTTTGTCTGGTTGAATTAATGTTTTGTAACGCATCTAATTTGTCGATTGGTAACCGTAGCGGATTTGGGGCAATTGAAATTTGGATTATTCCTATTGGGCAATTAGGTTTAGATTCTAAGTGGGGTTGTTTGTTTTCTTCTTGGAAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTTCTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGGTTTGTATGTTTTTTTCCTTGTTTGTTTTTAGTTTATGTTATTGATGAACTCATCATTGTTGTCGTGTTTGTATGTTGTGAGCAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATATCAACAAGTGTAATGGCAGAATTTTGGTGCGGTTTGTTTTCTGATATTCTTTTGAGCATTCATTGTCTGTTTAATCCTTTGAGTTCTTCATAAACTATGGATTTATGATTGAGGCCGCTTTGGAATTGCATTGTTCTTTTGTTTCGTTTCATATGTGATCCTTTGGTTTATGATAATCTGTGTTAGCATTTGGTTTGATGCGTCCTCGCTGTTGTGAGTGCTTTTCGTAGCAGTCGGTTTCGTTTTGTTTGACGAAAAAGCTAGTGGTACTAGTGAAATCGGACGACGTTTGTGAGATCCCATATTGGCTGGGAGGAGAAGAAGCATTTTTTTTATAAGGGTGTAGAAACCTCTCCTTAGCAGACACTTTTTTCATCCTTGAGGGGAAACTCGAAAGGGAAAACCCAAAAAAGACAATATCTACTAGTGGTAGGCTTGGGATGTTACAAATGATATTAGAGTTAGACACTGGACGATGTGCCAACGAGGAGGCTGAACCCCGAAGGGGGTGGACACAAGGACTCTAGGCCCTGGGGGGTCTCACATCGATTAGAGAAGGAAACTAGTGTCAACGAGGACGCTGGATCCCGAAGGGGTGTGGATTATGAGATCTCACATCGGTTATGGAGGAGAACGAAGCATTCGGGTGTGGAAACCTCTTCCTAGCAAACGCGTTTTAAAACTTTGAGGGGAAGCCCGGAAGGAAAAGCCCAAAAAGGACAATATCTAGCGGTTGGCTTGGGGCGGTTACAAAGTTTTTTTTTCACTACTAAAATTGCTAGATTTGAATTATAGGGACTAAATGCAACCAAAGGCATACGCGAGCGGTTGATTTTTAGGGGTAGATATGTTCTGTCGAACAACTTTACGACTCAACTAAGTAGTTCCTTTTGGTTTGGGTTATTCCATGTTCGAGACTTGGTCGATATTTTGGTAACTTAGACAAGATGAGCTATTGGATTAAGACGGTAACTTTTTGTGTCTGATTTGAACGTTGATGATAGAATTGGTAGATTGGACAACTTGCTATCTTTTTACATAAGAACTAATCTGTGAGATCCCATATGAGTTGGGGAGGAGAACAAAACATTCTTTATAAAGGTGTGGAAACCTCTTCCTAGTAGACTCGTTTTAAAAACCTTGAGGGGAACCTGGAAGAGAAAGCCCAAAGAGGACAATATCGGCTAGCGATAGGCTTGAGCTCAGGCTTGTCTGATCCTATAAGGCGTGCAATTTAAATTGTTTACTGACATGTAGATGGCATGTTGTTCTAATAGCACAGGTTTTATTTCTTAGAAGTTGAAGTTATATTTAGGGTTGCAACCATATTGTTATATATTGACCTCAAGGGGTAGTCTTTGGCGGTAAGGGCTATAGTGAGCTCACGGAACGATGTTTCGGTGGAAGGGTTTCTCTTTTCCACCCCGAACAAGGTTGCCATTCATCTGTTTGTTAGAATGAGACTCACATTAGCTAATTAAGGAGATGATCATGGGTTTATAAGTATATCATCCTATTGTAGAGGTTCGCGATTCCTAACATGGTATTAGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTTAAGTATCGAATAAAGAAGTTGTGAGTCTCGAAGGTATAGTCAAAAGTAACTCAAGTGTTAAACAAATGGTGTACTTTGTTCGAGAGCTCTAGAGAAGGAGTCGAGTCTCGATTAAGGAGAGGCTATTCGAGAGTTCCATAGGCCTCAGGGGAGTCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAAGCCTCGATTAAGGGAAAGTTATTCGACGGTTCCATAAGCCTCAAGGGAGGCTCTATGGTGTACTTTGTTCGATTGGAGGATTGTTGAGGATTGTTGGGAGGGAGCCCCGCATTGGCTAATTAAAGGGATGACCATGGATTTATAAGTAAGAAATATATCTCCATTGGTATGAGGCTTTTAGAGAAACCTTGTAAAGCCACGAGAGTTTATTCTCAAAGTGGACAGTATCATACTACTGTGGAGGTTCGTGATTCCTAACAAATTCTTCATTCTCTAGCTGAACTTCTAGTGTGACTTTTCAGTTGTTGGGTCATCAAGTTCTTTTATTTATTTTATACTCCGACTTCCCTTCGTGAAAAATATTCCCATATTACTCGTCTTTGTGGATATATATTTTTGATCTCTCAATTAATAACATATATTTTAATCAGTTGAGTTATGTTTAAATTGATGACTTAACCAGTTTAAATTTATAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCACCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACGATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCTGCCAACGTCGACCTCCCCCTCGTTTTTAGTAGCATACTTATCGAAAACTACAGAGATTATCATAACCCAGTATTTACCAGGACATTCTTTTATGGTTCAAAACCTTCTCATACAACGTGTAATTACTCGTGTCTGAGTACAACACCCAATCATTAACTATGGACCCATCTGAGAAACTCGAGCCTAAATTTCCTCTCAGCCTTGGAAAGTAAACAAAACAGCATGGCCTGTCCTTATGAGAAAAAAATCGTTTAAACGATGTAGTTTGAACGAGGGGAGGCGAGACGGGGTCGGATTTACGGTGAGTAACAACAGTTCTTACTGATGCAGGTAATGGTTTAAAAAACTTATCCAACTGTTGCAGGTGGTAAAAAAATTATGGGGGAGTGTACGTT

mRNA sequence

ATGGGCAAGGGACGCAGCTGTCAGCCCAACAGCAACATTTGGGTTAAAAGCCCAAAACATTCACCCGAACCCAGCCCAAGATGGGCAAGGGACGCAGCTGTCAGCCCAATCGGCCCAGGAAAGGCAACATCTGGGCTAAAAAGCCCAAAATTTTCACCCGAATCCAGCCCCAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAAAAAAGGACAGTAAGAAGAAGAACGAGGAAGACGAGAGGAAGAACAACATTGATTCTGTTGATAAAAATAGTCAAAATTTTAAGCAAAAGCAGAAGCCCATTATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTTCTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATATCAACAAGTGTAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCACCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACGATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCTGCCAACGTCGACCTCCCCCTCGTTTTTAGTAGCATACTTATCGAAAACTACAGAGATTATCATAACCCAGTATTTACCAGGACATTCTTTTATGGTTCAAAACCTTCTCATACAACGTGTAATTACTCGTGTCTGAGTACAACACCCAATCATTAACTATGGACCCATCTGAGAAACTCGAGCCTAAATTTCCTCTCAGCCTTGGAAAGTAAACAAAACAGCATGGCCTGTCCTTATGAGAAAAAAATCGTTTAAACGATGTAGTTTGAACGAGGGGAGGCGAGACGGGGTCGGATTTACGGTGAGTAACAACAGTTCTTACTGATGCAGGTAATGGTTTAAAAAACTTATCCAACTGTTGCAGGTGGTAAAAAAATTATGGGGGAGTGTACGTT

Coding sequence (CDS)

ATGGGCAAGGGACGCAGCTGTCAGCCCAACAGCAACATTTGGGTTAAAAGCCCAAAACATTCACCCGAACCCAGCCCAAGATGGGCAAGGGACGCAGCTGTCAGCCCAATCGGCCCAGGAAAGGCAACATCTGGGCTAAAAAGCCCAAAATTTTCACCCGAATCCAGCCCCAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAAAAAAGGACAGTAAGAAGAAGAACGAGGAAGACGAGAGGAAGAACAACATTGATTCTGTTGATAAAAATAGTCAAAATTTTAAGCAAAAGCAGAAGCCCATTATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTTCTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATATCAACAAGTGTAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCACCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACGATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG

Protein sequence

MGKGRSCQPNSNIWVKSPKHSPEPSPRWARDAAVSPIGPGKATSGLKSPKFSPESSPKQLEWIYLQQEEEKKDSKKKNEEDERKNNIDSVDKNSQNFKQKQKPIMVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITSSSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKITNDSDDDDNDFILSPKRRKM
Homology
BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A6J1KPA8 (uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.4e-96
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 164
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 165 SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 224
           SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME
Sbjct: 61  SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 120

Query: 225 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 284
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 180

Query: 285 NDSDDDDNDFILSPKRRKM 304
           NDSDDDDNDFILSPKRRKM
Sbjct: 181 NDSDDDDNDFILSPKRRKM 199

BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.8e-93
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 164
           MVSD KPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 165 SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 224
           SSKTTTKAT+STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 225 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 284
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 285 NDSDDDDNDFILSPKRRKM 304
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 8.3e-70
Identity = 166/209 (79.43%), Postives = 178/209 (85.17%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKN-----NSSVSSSKHKSVSVLPKSEVKS 164
           MVSD K T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS++ KSEVKS
Sbjct: 1   MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKS 60

Query: 165 KTITSSSKTTTK---ATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSV 224
           KTI+SSSKTTTK    T++TAKVREKK+FNL GQKYDPPEEREPLRIFYESLSKQI  S 
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 225 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK--SLKPPSRPESSQRPQQPPKN 284
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK  S KP SRPESSQRPQ P KN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 285 GDLKAKKKITNDSDDDDNDFILSPKRRKM 304
           GD+KAKKKI NDSDDDD DFILSPKRRKM
Sbjct: 181 GDIKAKKKIMNDSDDDD-DFILSPKRRKM 205

BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 166/209 (79.43%), Postives = 178/209 (85.17%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKN-----NSSVSSSKHKSVSVLPKSEVKS 164
           MVSD K T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS++ K+EVKS
Sbjct: 1   MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKS 60

Query: 165 KTITSSSKTTTK---ATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSV 224
           KTI+SSSKTTTK    T++TAKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQI  S 
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 225 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK--SLKPPSRPESSQRPQQPPKN 284
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK  S KP SRPESSQRPQ P KN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 285 GDLKAKKKITNDSDDDDNDFILSPKRRKM 304
           GD+KAKKKI NDSDDDD DFILSPKRRKM
Sbjct: 181 GDIKAKKKIVNDSDDDD-DFILSPKRRKM 205

BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A6J1BR23 (uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 159/206 (77.18%), Postives = 175/206 (84.95%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKK----NNSSVSSSKHKSVSVLPKSEVKSK 164
           MV++ KPTVSK+K G+QDGGSRLKLESSDNK+    +  S   SK KS SVL KSEVKSK
Sbjct: 1   MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSK 60

Query: 165 TITSSSKTTTK---ATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVM 224
             +SSSKTT+K    T++T KVREKKV+NLAGQKYDPPEEREPLRIFYESLSKQI TS M
Sbjct: 61  ITSSSSKTTSKTTTTTTTTTKVREKKVYNLAGQKYDPPEEREPLRIFYESLSKQIPTSEM 120

Query: 225 AEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDL 284
           AEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+KS K PS+PESSQ+ Q   KNGDL
Sbjct: 121 AEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDL 180

Query: 285 KAKKKITNDSDDDDNDFILSPKRRKM 304
           KAKKKITNDS +DD DFILSPKRRKM
Sbjct: 181 KAKKKITNDSSEDD-DFILSPKRRKM 205

BLAST of CmaCh12G002540 vs. NCBI nr
Match: XP_023002565.1 (uncharacterized protein LOC111496374 [Cucurbita maxima])

HSP 1 Score: 362.8 bits (930), Expect = 2.8e-96
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 164
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 165 SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 224
           SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME
Sbjct: 61  SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 120

Query: 225 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 284
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 180

Query: 285 NDSDDDDNDFILSPKRRKM 304
           NDSDDDDNDFILSPKRRKM
Sbjct: 181 NDSDDDDNDFILSPKRRKM 199

BLAST of CmaCh12G002540 vs. NCBI nr
Match: KAG7020306.1 (hypothetical protein SDJN02_16990, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 9.0e-95
Identity = 203/237 (85.65%), Postives = 219/237 (92.41%), Query Frame = 0

Query: 67  QEEEKKDSKKKNEEDERKNNIDSVDKNSQNFKQKQKPIMVSDAKPTVSKVKLGHQDGGSR 126
           ++++K+  +++ ++   +  +  + K  +  KQKQKPIMVSDAKPTVSKVKLGHQDGGSR
Sbjct: 9   RKKKKRTVRRRTKKTRGRTTLILLTKIVKIIKQKQKPIMVSDAKPTVSKVKLGHQDGGSR 68

Query: 127 LKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITSSSKTTTKATSSTAKVREKKVFN 186
           LKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITSSSKTTTKAT+STAKVREKKVFN
Sbjct: 69  LKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITSSSKTTTKATTSTAKVREKKVFN 128

Query: 187 LAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMMEHGMLSPEKAKKAYEKKLRRQKE 246
           LAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMMEHGMLSPEKAKKAYEKKLRRQKE
Sbjct: 129 LAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKE 188

Query: 247 QRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKITNDSDDDDNDFILSPKRRKM 304
           QRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKITN+SDDDDNDFILSPKRRKM
Sbjct: 189 QRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKITNNSDDDDNDFILSPKRRKM 245

BLAST of CmaCh12G002540 vs. NCBI nr
Match: KAG6585389.1 (hypothetical protein SDJN03_18122, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.8 bits (904), Expect = 2.9e-93
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 164
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60

Query: 165 SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 224
           SSKTTTKAT+STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 225 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 284
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 285 NDSDDDDNDFILSPKRRKM 304
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

BLAST of CmaCh12G002540 vs. NCBI nr
Match: XP_022951620.1 (uncharacterized protein LOC111454380 isoform X1 [Cucurbita moschata])

HSP 1 Score: 352.4 bits (903), Expect = 3.8e-93
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 164
           MVSD KPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 165 SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 224
           SSKTTTKAT+STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 225 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 284
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 285 NDSDDDDNDFILSPKRRKM 304
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

BLAST of CmaCh12G002540 vs. NCBI nr
Match: XP_023536695.1 (uncharacterized protein LOC111797995 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.1 bits (897), Expect = 1.9e-92
Identity = 192/199 (96.48%), Postives = 196/199 (98.49%), Query Frame = 0

Query: 105 MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 164
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60

Query: 165 SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 224
           SSKTTTKAT+STAKVREKKVFNLAGQK+DPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKHDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 225 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 284
           HGMLSPEKAKKAYEKK+RRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKMRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 285 NDSDDDDNDFILSPKRRKM 304
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

BLAST of CmaCh12G002540 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 4.2e-34
Identity = 110/241 (45.64%), Postives = 150/241 (62.24%), Query Frame = 0

Query: 70  EKKDSKKKNEEDERKNNIDSVDKNSQNFKQKQKPIMVSDAKPTVSKVKLGHQDGGSRLKL 129
           +++ S  K+E  +  +++ S  K   + K K+K  + + ++P +S  K          K 
Sbjct: 4   QERPSSAKSEPRDASSSLSSRVKIDPSIKDKKK--IATSSRPIMSDSKPRSSVSTVTAKS 63

Query: 130 ESSDNKKNNS--SVSSSKHKSVSVLPKSEVKSKTITSSSKTTTKATSSTAK---VREKKV 189
           E+      NS  +++++   +  V  K++  S  ++     TT AT S  K    REKKV
Sbjct: 64  EAKPKVPINSVKTIATTSAAASLVKGKAQTTSTVVSLVKAKTTSATVSLVKGKAKREKKV 123

Query: 190 FNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMMEHGMLSPEKAKKAYEKKLRRQ 249
           ++LAGQK+DPPEEREPLRIFYESLSKQI  S MAEFW+MEHGMLSPEKAK+A+EKK R+ 
Sbjct: 124 YSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRKM 183

Query: 250 KEQRTGTPIKSLKP-PSRPESSQRPQQPPKNG-DLKAKKKITNDSDDDDNDFILSPKRRK 304
           K+ R GTP KS     S+ ESSQR      NG D + KKK+ +D DDDD+DFILS KRRK
Sbjct: 184 KQIRMGTPSKSAPTFSSKAESSQRTSASKNNGLDARKKKKVVDDDDDDDDDFILSHKRRK 242

BLAST of CmaCh12G002540 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-15
Identity = 93/266 (34.96%), Postives = 121/266 (45.49%), Query Frame = 0

Query: 69  EEKKDSKKKNEEDERKNNIDSVDKNSQNFKQKQKPIMVSDAKPTVSKVKLGHQDGGSRLK 128
           E+ K  K K E +E   ++ S  K                 KPT      G+  G  +LK
Sbjct: 5   EDVKAMKMKEEAEEDNKSLSSFAKK----------------KPT-----NGNNAGSKKLK 64

Query: 129 LESS-----DNKKNNSSVSSSKHKSV----------SVLPKSEVKSKTITSSSKTTTKAT 188
            E +     DNK   SSVS S+ K V             P S+  S    S      +  
Sbjct: 65  KEENDDDDDDNKPIKSSVSGSRAKPVKKKEEIDKDDEKKPVSKRNSSVGVSKENKKPEKE 124

Query: 189 SSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMMEHGMLSPEKA 248
               K RE+KV++L GQK + P+ER+PLRIFYESL KQI TS MA+ W+ME G+L  EKA
Sbjct: 125 EEVKKKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLMESGLLPAEKA 184

Query: 249 KKAYEKKLRRQKEQRTGTPIKSLKPPSRPES--------------SQRPQQPPKNGDLK- 303
           KK  EKKL  QK  +  +P+KS     R  S              S+      K  D K 
Sbjct: 185 KKVLEKKL--QKGGKLSSPVKSAASTPRSNSKSVTVKKKEVQKSPSEALSNKKKGNDSKP 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KPA81.4e-96100.00uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374... [more]
A0A6J1GJC91.8e-9397.49uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3BCG58.3e-7079.43uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0LLY41.1e-6979.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1[more]
A0A6J1BR233.5e-6877.18uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
XP_023002565.12.8e-96100.00uncharacterized protein LOC111496374 [Cucurbita maxima][more]
KAG7020306.19.0e-9585.65hypothetical protein SDJN02_16990, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6585389.12.9e-9397.49hypothetical protein SDJN03_18122, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022951620.13.8e-9397.49uncharacterized protein LOC111454380 isoform X1 [Cucurbita moschata][more]
XP_023536695.11.9e-9296.48uncharacterized protein LOC111797995 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G11600.14.2e-3445.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G19990.13.4e-1534.96unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..89
NoneNo IPR availablePANTHERPTHR33828OS05G0596200 PROTEINcoord: 98..302
NoneNo IPR availablePANTHERPTHR33828:SF1OS05G0596200 PROTEINcoord: 98..302

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G002540.1CmaCh12G002540.1mRNA