CmaCh12G002540 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAAGGGACGCAGCTGTCAGCCCAACAGCAACATTTGGGTTAAAAGCCCAAAACATTCACCCGAACCCAGCCCAAGATGGGCAAGGGACGCAGCTGTCAGCCCAATCGGCCCAGGAAAGGCAACATCTGGGCTAAAAAGCCCAAAATTTTCACCCGAATCCAGCCCCAAGGTGGGCCAGGGACGCAATTGTCAGCCCAATCGGCCCACAATAGGCAAAATTTGGGCTAAAAAGCCCAAAATATTCACCCGAACCCAGCCCCGAGGTGGGCAAGGGACGCAATTGTCAGCCCAATTGGCCCACAATAGGCAACATTTGAGCTAAAAAGCCCAAAATATTCACCCCGAACCCAGCCCAAGGTGGGCAAGGGTGGCGCGTCAGTCCACTGGGCCCACAATAGGTAACATTGGGCCAAAAGCCCAAAACATTCACCCAAACCTAGCCCAAGGTGGGCAAGGGACGTAGCTGTCAGCCCAATTGGCCCACAATAGGCGACATTTGGGCCAAAAGCCCAAAATATTCACCTGAACCCAGTCCAATATATATATCATTATATACATACATATATATTGCGTTAAAAAAATGGTAAAAACAAAAAGATTAATATTTATACTGTACCATGTGGGGCAACGTGAAAGTTAGCGACGGCAGTTATTCCGCTTTTCCTTCCGACAACCTTTCTCGTATTCTGCACAAAAAAAGAAAAAAAAGAAAAGAGGAATTCGTTGACGCCGTAACGGAAAGTGAGGCTTAAGCGTTTATTTGCCTTGAGGACAAAACCGTCTTTTCACACCCTCTAACCGGACCCTTTAAAGAAAAAAAAAAAAAAAAAAAAAAAAGAAGTTTTTTGCTCTTCACCTGCTAAAATTACCCTGAAATTGCTGGTTAAAACCAAAAACAACCAATTTAATTGGCGGAATTTTGATACTTCTTGTTCACATTTATTTTTATTATCTTATTCTGAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAAAAAAGGACAGTAAGAAGAAGAACGAGGAAGACGAGAGGAAGAACAACATTGATTCTGTTGATAAAAATAGTCAAAATTTTAAGCAAAAGCAGAAGCCCATTATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTACCCATTTAGCAAAATTTAAGGTTTATTATTGCCTGATTCAGATTTAGCTTCCGCGAATTGGGGATTTTGTGTTTGTCTGGTTGAATTAATGTTTTGTAACGCATCTAATTTGTCGATTGGTAACCGTAGCGGATTTGGGGCAATTGAAATTTGGATTATTCCTATTGGGCAATTAGGTTTAGATTCTAAGTGGGGTTGTTTGTTTTCTTCTTGGAAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTTCTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGGTTTGTATGTTTTTTTCCTTGTTTGTTTTTAGTTTATGTTATTGATGAACTCATCATTGTTGTCGTGTTTGTATGTTGTGAGCAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATATCAACAAGTGTAATGGCAGAATTTTGGTGCGGTTTGTTTTCTGATATTCTTTTGAGCATTCATTGTCTGTTTAATCCTTTGAGTTCTTCATAAACTATGGATTTATGATTGAGGCCGCTTTGGAATTGCATTGTTCTTTTGTTTCGTTTCATATGTGATCCTTTGGTTTATGATAATCTGTGTTAGCATTTGGTTTGATGCGTCCTCGCTGTTGTGAGTGCTTTTCGTAGCAGTCGGTTTCGTTTTGTTTGACGAAAAAGCTAGTGGTACTAGTGAAATCGGACGACGTTTGTGAGATCCCATATTGGCTGGGAGGAGAAGAAGCATTTTTTTTATAAGGGTGTAGAAACCTCTCCTTAGCAGACACTTTTTTCATCCTTGAGGGGAAACTCGAAAGGGAAAACCCAAAAAAGACAATATCTACTAGTGGTAGGCTTGGGATGTTACAAATGATATTAGAGTTAGACACTGGACGATGTGCCAACGAGGAGGCTGAACCCCGAAGGGGGTGGACACAAGGACTCTAGGCCCTGGGGGGTCTCACATCGATTAGAGAAGGAAACTAGTGTCAACGAGGACGCTGGATCCCGAAGGGGTGTGGATTATGAGATCTCACATCGGTTATGGAGGAGAACGAAGCATTCGGGTGTGGAAACCTCTTCCTAGCAAACGCGTTTTAAAACTTTGAGGGGAAGCCCGGAAGGAAAAGCCCAAAAAGGACAATATCTAGCGGTTGGCTTGGGGCGGTTACAAAGTTTTTTTTTCACTACTAAAATTGCTAGATTTGAATTATAGGGACTAAATGCAACCAAAGGCATACGCGAGCGGTTGATTTTTAGGGGTAGATATGTTCTGTCGAACAACTTTACGACTCAACTAAGTAGTTCCTTTTGGTTTGGGTTATTCCATGTTCGAGACTTGGTCGATATTTTGGTAACTTAGACAAGATGAGCTATTGGATTAAGACGGTAACTTTTTGTGTCTGATTTGAACGTTGATGATAGAATTGGTAGATTGGACAACTTGCTATCTTTTTACATAAGAACTAATCTGTGAGATCCCATATGAGTTGGGGAGGAGAACAAAACATTCTTTATAAAGGTGTGGAAACCTCTTCCTAGTAGACTCGTTTTAAAAACCTTGAGGGGAACCTGGAAGAGAAAGCCCAAAGAGGACAATATCGGCTAGCGATAGGCTTGAGCTCAGGCTTGTCTGATCCTATAAGGCGTGCAATTTAAATTGTTTACTGACATGTAGATGGCATGTTGTTCTAATAGCACAGGTTTTATTTCTTAGAAGTTGAAGTTATATTTAGGGTTGCAACCATATTGTTATATATTGACCTCAAGGGGTAGTCTTTGGCGGTAAGGGCTATAGTGAGCTCACGGAACGATGTTTCGGTGGAAGGGTTTCTCTTTTCCACCCCGAACAAGGTTGCCATTCATCTGTTTGTTAGAATGAGACTCACATTAGCTAATTAAGGAGATGATCATGGGTTTATAAGTATATCATCCTATTGTAGAGGTTCGCGATTCCTAACATGGTATTAGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTTAAGTATCGAATAAAGAAGTTGTGAGTCTCGAAGGTATAGTCAAAAGTAACTCAAGTGTTAAACAAATGGTGTACTTTGTTCGAGAGCTCTAGAGAAGGAGTCGAGTCTCGATTAAGGAGAGGCTATTCGAGAGTTCCATAGGCCTCAGGGGAGTCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAAGCCTCGATTAAGGGAAAGTTATTCGACGGTTCCATAAGCCTCAAGGGAGGCTCTATGGTGTACTTTGTTCGATTGGAGGATTGTTGAGGATTGTTGGGAGGGAGCCCCGCATTGGCTAATTAAAGGGATGACCATGGATTTATAAGTAAGAAATATATCTCCATTGGTATGAGGCTTTTAGAGAAACCTTGTAAAGCCACGAGAGTTTATTCTCAAAGTGGACAGTATCATACTACTGTGGAGGTTCGTGATTCCTAACAAATTCTTCATTCTCTAGCTGAACTTCTAGTGTGACTTTTCAGTTGTTGGGTCATCAAGTTCTTTTATTTATTTTATACTCCGACTTCCCTTCGTGAAAAATATTCCCATATTACTCGTCTTTGTGGATATATATTTTTGATCTCTCAATTAATAACATATATTTTAATCAGTTGAGTTATGTTTAAATTGATGACTTAACCAGTTTAAATTTATAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCACCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACGATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCTGCCAACGTCGACCTCCCCCTCGTTTTTAGTAGCATACTTATCGAAAACTACAGAGATTATCATAACCCAGTATTTACCAGGACATTCTTTTATGGTTCAAAACCTTCTCATACAACGTGTAATTACTCGTGTCTGAGTACAACACCCAATCATTAACTATGGACCCATCTGAGAAACTCGAGCCTAAATTTCCTCTCAGCCTTGGAAAGTAAACAAAACAGCATGGCCTGTCCTTATGAGAAAAAAATCGTTTAAACGATGTAGTTTGAACGAGGGGAGGCGAGACGGGGTCGGATTTACGGTGAGTAACAACAGTTCTTACTGATGCAGGTAATGGTTTAAAAAACTTATCCAACTGTTGCAGGTGGTAAAAAAATTATGGGGGAGTGTACGTT ATGGGCAAGGGACGCAGCTGTCAGCCCAACAGCAACATTTGGGTTAAAAGCCCAAAACATTCACCCGAACCCAGCCCAAGATGGGCAAGGGACGCAGCTGTCAGCCCAATCGGCCCAGGAAAGGCAACATCTGGGCTAAAAAGCCCAAAATTTTCACCCGAATCCAGCCCCAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAAAAAAGGACAGTAAGAAGAAGAACGAGGAAGACGAGAGGAAGAACAACATTGATTCTGTTGATAAAAATAGTCAAAATTTTAAGCAAAAGCAGAAGCCCATTATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTTCTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATATCAACAAGTGTAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCACCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACGATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCTGCCAACGTCGACCTCCCCCTCGTTTTTAGTAGCATACTTATCGAAAACTACAGAGATTATCATAACCCAGTATTTACCAGGACATTCTTTTATGGTTCAAAACCTTCTCATACAACGTGTAATTACTCGTGTCTGAGTACAACACCCAATCATTAACTATGGACCCATCTGAGAAACTCGAGCCTAAATTTCCTCTCAGCCTTGGAAAGTAAACAAAACAGCATGGCCTGTCCTTATGAGAAAAAAATCGTTTAAACGATGTAGTTTGAACGAGGGGAGGCGAGACGGGGTCGGATTTACGGTGAGTAACAACAGTTCTTACTGATGCAGGTAATGGTTTAAAAAACTTATCCAACTGTTGCAGGTGGTAAAAAAATTATGGGGGAGTGTACGTT ATGGGCAAGGGACGCAGCTGTCAGCCCAACAGCAACATTTGGGTTAAAAGCCCAAAACATTCACCCGAACCCAGCCCAAGATGGGCAAGGGACGCAGCTGTCAGCCCAATCGGCCCAGGAAAGGCAACATCTGGGCTAAAAAGCCCAAAATTTTCACCCGAATCCAGCCCCAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAAAAAAGGACAGTAAGAAGAAGAACGAGGAAGACGAGAGGAAGAACAACATTGATTCTGTTGATAAAAATAGTCAAAATTTTAAGCAAAAGCAGAAGCCCATTATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTTCTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTGTCGAAACAGATATCAACAAGTGTAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCACCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACGATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG MGKGRSCQPNSNIWVKSPKHSPEPSPRWARDAAVSPIGPGKATSGLKSPKFSPESSPKQLEWIYLQQEEEKKDSKKKNEEDERKNNIDSVDKNSQNFKQKQKPIMVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITSSSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKITNDSDDDDNDFILSPKRRKM Homology
BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A6J1KPA8 (uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 1.4e-96 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.8e-93 Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 8.3e-70 Identity = 166/209 (79.43%), Postives = 178/209 (85.17%), Query Frame = 0
BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69 Identity = 166/209 (79.43%), Postives = 178/209 (85.17%), Query Frame = 0
BLAST of CmaCh12G002540 vs. ExPASy TrEMBL
Match: A0A6J1BR23 (uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68 Identity = 159/206 (77.18%), Postives = 175/206 (84.95%), Query Frame = 0
BLAST of CmaCh12G002540 vs. NCBI nr
Match: XP_023002565.1 (uncharacterized protein LOC111496374 [Cucurbita maxima]) HSP 1 Score: 362.8 bits (930), Expect = 2.8e-96 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CmaCh12G002540 vs. NCBI nr
Match: KAG7020306.1 (hypothetical protein SDJN02_16990, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357.8 bits (917), Expect = 9.0e-95 Identity = 203/237 (85.65%), Postives = 219/237 (92.41%), Query Frame = 0
BLAST of CmaCh12G002540 vs. NCBI nr
Match: KAG6585389.1 (hypothetical protein SDJN03_18122, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 352.8 bits (904), Expect = 2.9e-93 Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CmaCh12G002540 vs. NCBI nr
Match: XP_022951620.1 (uncharacterized protein LOC111454380 isoform X1 [Cucurbita moschata]) HSP 1 Score: 352.4 bits (903), Expect = 3.8e-93 Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CmaCh12G002540 vs. NCBI nr
Match: XP_023536695.1 (uncharacterized protein LOC111797995 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350.1 bits (897), Expect = 1.9e-92 Identity = 192/199 (96.48%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CmaCh12G002540 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 142.9 bits (359), Expect = 4.2e-34 Identity = 110/241 (45.64%), Postives = 150/241 (62.24%), Query Frame = 0
BLAST of CmaCh12G002540 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). ) HSP 1 Score: 80.1 bits (196), Expect = 3.4e-15 Identity = 93/266 (34.96%), Postives = 121/266 (45.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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