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CmaCh12G002200 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTAATATTAGTTTAAATTATTCACTGGAAAAATATGAGAGAATTAAGAAGCGGCAGAAACTATAAGCCAAATCAAGCATTTAGGCTTCAAGAACCGAATAAAAACACCGGCGCCGGAGATTGCTTCCAACAACCCTCAACCATTCCCAAATGGCTCAGCCTCAGCCCGATCCATCCAATCCCCTCCCTCCAAACCCATCGCACTCCGATCATGCGGATCCAGTCACCGATCACCTCTCCACCGACTCTTCGCCCCATCCCAAGCTTAACCCTAGCGACGTTGCGCCGCCCCCGATGCCGGAGGATTGGACTACCGTCCCCATGGGCTCCCAACCCCAACATCCACATCCGCCTCCACCTCAAACTCAGCCGAACAGCGAGGTTCGTGCTCCGATCTCTGAGGGAAATGCCACCACTCTGCCGAATGATGCGAATCCATATGTTTCTGCAGCTCCAGCCCAGGGAAATCCTTCTTCTGCTAAGAGTAAGTCGATTTTTATTGAGCGTTTGGAATTAATGAAATCCTTGTTCATTGGATGTGCGTGTTTGATGAATGATCAGATACGATGGATTCCGTGAAGGTGATGCTTGTAAGATGGGGAAAGAGGGCTGTTGAGGCAACCAAGAAAGCCGAGGATCTTGCTGGGAACATGTGGCAGCACTGTAAGCCCTTCAATTCTTTATCACCTTCTCATCACTATTGATAAATTTGAATCTAACTTCAATTGTTTGCCGATTTTGATTGGAACATATGCCATGTCCATTTAAACACAGATCCTTGAAAACCTATGATTCGTCTGCTCATGATCCTGGCAGAAATCATTTCTCAAGAACCATTTCTCTTCTGTTCTTGTATGTACTGTGCTTTTCCATTGAATGAGCTGTGTTCTTTTTTTCCTGAAATTGAATTTTGGGTTTTGTTTTATCTGGTACTGTAAGCTATCTCTGCACGTATTCAATTGAAACTAGGGTTCGGGGTAGTGACTGTTGTAAGATGATTCCCATATCGGGGTTGACCATGGATTTATAAGTAAGGAATAAATCTCCATTGGTACGAGGTCTTTTGGGGAAACCAAAAACAAGGTCACGAGAGCTTATACTCAAAGGGGACAATATCATATTATTGTGGATGTTCGTGGTTCAATGACTGCAAGATCGTTGGTTGGTTTTGAAACTTTTTAGCAGCTTCTGTTAACCAGTAATCTAAAACAGTCTTGTTTCAAACCAGTGAAAACAGGGCCTAGTTTTACTGAAGCTGCTGTGGGAAGAATTGCTCAGGGGACGAAAGTTCTTGCAGAAGGTGGTTATGAGAAGATCTTCCGGCAAACTTTTGAGAATACACCTGAAGAGAAACTTCAGAAGGCATATGCATGCTACCTGTCCACATCTGCCGGTCCTGTGATGGGAACTCTGTACATAACAACGGCTAAAATTGCCTTTTGCAGTGACAGTCCTCTTTCTTACAAAGTGGATGAGGAGACCCGATGGTGCCTTTACAAGGTAAAATTGAATTGTTAAGCTTACTCTTATAGTGATCTTAGGCTGCAGTACGAACCAGCTTTCATAGTTTTATTTTGTTGAATGGATTTTGTCCTTTATGGTAATTATGATACTAAAAGTTTTGGTTGAACTGATGTTGATTTAAGTGTAAAAGATGAGATGAATAGTGTTGAGCATTCTTGGGAGTCACGTATTGGCTAAGTTAGGAATGATCGTGGGTTTATAAGTAAAAGGAATACATCTCTATTGGTATGGAGCCTTTTGCGGAAGTCCGAAGCAAAGCCATGAGAACTCATGCTCAAATTGGACAATATCATACCATTGTGGAGATACTTGATGCCTAACATGGTATCAGAGTCATGCCCTTAATTTAGTCATGTCAATAGAATCCTCAAGTGTCGAACAAAGAAATTGCTAGCTTTAAAGGTGTAGTCAAAAGTGACTCATGTGTAGCCTAGCAATTTCTTTGTTAGTATTCCAAATATAATTTATAATTTGATTTTGATCATCTTGGTCAAGAGATTGCCAATCTGATCGGTAGTTTAATATATATATATATATATTTTTCTTTCCAAGATTTGATGATGCAAGAGTTTCATTCACATACGTTGTGTTCATTTACCTATTGTAGATTATGGCTTTTGTAAGTCTCTATGCAACCGTTGATTTGGAGTTGCACCCTCTTCTTCTATGCTTGGACCATGAAACATTACTTAGCTCTTGTATTACCATGTTTTTATGCTTCTCTGAGATCCTACGTCAGTTGAAGAGGAGAACGAAACATTTTTTATAAGGATGTGGAAACCTCTCTTTAGCAGACGTGTTTTAAAAACATCAAGAGGAAGCTCGAAAGGGAAAACCCAAAGAGGATAATATTTGCTAAGAGTGAGCTTGGACCGTTATAGCTTCTATGTTGTATAAGTTGTGGAGGCTCTATTAATAAGAAATTGACTGAACGTTCCCTGTATCTTCTCTGGTTATGATAGGTGATGATCCCACTACATCACCTTAGAGCAGTGAACCCATCAACAAGCAAAGCGAAACCGCCTGAAAAATTCATACAGGTTATCTCCATTGACAATCATGAATTCTGGTTTTTGGGGTTTGTAAATTATGATGGTGCAGTGAAAATTCTTGAAGAAACCCTACAGCCCAATAGTCCGCGTGCTGCCTAAAATTCATTCTGGAACACATCAACTTTTATCTCGTCACCAACAGTAAGTAAGCATATTGTAGTAAGCCAAGATTTTGATGATATACAAACAACTACTGTAGAAATACAAATTATGAAATACTTGCAATTACTCTGCTGTCTTTATGAAAGATTGGAAATTGTTTGAACTCTTATACAATTTTGTTGATTGAATTGAATGGTAAATAGTATTGATGATTGAATTCTTCTGGACCTGTGTTGTTCTTCAGTTTGGCTGTTCATTCCTCATTCATTTACATTATCCCATGGTTTTTGTATTAACCATTATCAGTAAATTTTCTTCAATGCTCTTATTAGTTTTTTTTATTAGGAAAGTAGGTTAGCTTAAGTATATTTATGTTATGTTCATTAAAAGCTTATGTTTCCTCACTTTCTACCGTGAGTTTCATTTTTAAACCTTTTGAACTCTTTAATCTAGGTTTAAATGAACTTGCATGCATCTTATTTGTGAGATATCACGTCGGCTGGAGAGGGAAATGAAGCATTCTTAAAGGTCTGGAAACCTCTTCCTAGCAGATGTATTTTAAAATCTCGAGGGAGGAGAAGCTCGGAAGGAAAAGCCCAAAGGATAGTATCTGTTAGCGGTGGGCTTAGGTTGTAACAAATTGTATTAGACATCGGGCGGGTTGAGCCCCAAAGGGGATGGATACCAAGCGGTGTGCTCGTGAGGACACTAGGCCTTAAATGGGGTGGATTGTGGGTCCCACATCAACTGGAGAGGGGAACAAGTACCAATGAGGACGCTGGGCCCCGAAGGGAGTGGGATTGTGAGATCCCACGTTGGTTGGAGTGGGGAAGCCCAAACATTCTTTCTAAGGTGTGTAAACCTCTCCCTACAAGAGGGCCGGAAAAGGATCTTCCTATTGAAACAAGGGTGTGAGACAAAGCTGAATATTGAAGGAATCGAAATAGGGAAGAAAAAGAAGGCAAAGACATGACAAAAATATCTTAAAATCTGAGCTGTATTGTCAGATAGCAATAAGCAAAGGCAAGCAAATAGGTGTTTTCTTGTTTCAACTGAAAAGCCCCACATGTTTCAATCATGTTCTTACACCTTAAAACCCCC TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTAATATTAGTTTAAATTATTCACTGGAAAAATATGAGAGAATTAAGAAGCGGCAGAAACTATAAGCCAAATCAAGCATTTAGGCTTCAAGAACCGAATAAAAACACCGGCGCCGGAGATTGCTTCCAACAACCCTCAACCATTCCCAAATGGCTCAGCCTCAGCCCGATCCATCCAATCCCCTCCCTCCAAACCCATCGCACTCCGATCATGCGGATCCAGTCACCGATCACCTCTCCACCGACTCTTCGCCCCATCCCAAGCTTAACCCTAGCGACGTTGCGCCGCCCCCGATGCCGGAGGATTGGACTACCGTCCCCATGGGCTCCCAACCCCAACATCCACATCCGCCTCCACCTCAAACTCAGCCGAACAGCGAGGTTCGTGCTCCGATCTCTGAGGGAAATGCCACCACTCTGCCGAATGATGCGAATCCATATGTTTCTGCAGCTCCAGCCCAGGGAAATCCTTCTTCTGCTAAGAATACGATGGATTCCGTGAAGGTGATGCTTGTAAGATGGGGAAAGAGGGCTGTTGAGGCAACCAAGAAAGCCGAGGATCTTGCTGGGAACATGTGGCAGCACTTGAAAACAGGGCCTAGTTTTACTGAAGCTGCTGTGGGAAGAATTGCTCAGGGGACGAAAGTTCTTGCAGAAGGTGGTTATGAGAAGATCTTCCGGCAAACTTTTGAGAATACACCTGAAGAGAAACTTCAGAAGGCATATGCATGCTACCTGTCCACATCTGCCGGTCCTGTGATGGGAACTCTGTACATAACAACGGCTAAAATTGCCTTTTGCAGTGACAGTCCTCTTTCTTACAAAGTGGATGAGGAGACCCGATGGTGCCTTTACAAGGTGATGATCCCACTACATCACCTTAGAGCAGTGAACCCATCAACAAGCAAAGCGAAACCGCCTGAAAAATTCATACAGGTTATCTCCATTGACAATCATGAATTCTGGTTTTTGGGGTTTGTAAATTATGATGGTGCAGTGAAAATTCTTGAAGAAACCCTACAGCCCAATAGTCCGCGTGCTGCCTAAAATTCATTCTGGAACACATCAACTTTTATCTCGTCACCAACAGTTTAAATGAACTTGCATGCATCTTATTTGTGAGATATCACGTCGGCTGGAGAGGGAAATGAAGCATTCTTAAAGGTCTGGAAACCTCTTCCTAGCAGATGTATTTTAAAATCTCGAGGGAGGAGAAGCTCGGAAGGAAAAGCCCAAAGGATAGTATCTGTTAGCGGTGGGCTTAGGTTGTAACAAATTGTATTAGACATCGGGCGGGTTGAGCCCCAAAGGGGATGGATACCAAGCGGTGTGCTCGTGAGGACACTAGGCCTTAAATGGGGTGGATTGTGGGTCCCACATCAACTGGAGAGGGGAACAAGTACCAATGAGGACGCTGGGCCCCGAAGGGAGTGGGATTGTGAGATCCCACGTTGGTTGGAGTGGGGAAGCCCAAACATTCTTTCTAAGGTGTGTAAACCTCTCCCTACAAGAGGGCCGGAAAAGGATCTTCCTATTGAAACAAGGGTGTGAGACAAAGCTGAATATTGAAGGAATCGAAATAGGGAAGAAAAAGAAGGCAAAGACATGACAAAAATATCTTAAAATCTGAGCTGTATTGTCAGATAGCAATAAGCAAAGGCAAGCAAATAGGTGTTTTCTTGTTTCAACTGAAAAGCCCCACATGTTTCAATCATGTTCTTACACCTTAAAACCCCC ATGGCTCAGCCTCAGCCCGATCCATCCAATCCCCTCCCTCCAAACCCATCGCACTCCGATCATGCGGATCCAGTCACCGATCACCTCTCCACCGACTCTTCGCCCCATCCCAAGCTTAACCCTAGCGACGTTGCGCCGCCCCCGATGCCGGAGGATTGGACTACCGTCCCCATGGGCTCCCAACCCCAACATCCACATCCGCCTCCACCTCAAACTCAGCCGAACAGCGAGGTTCGTGCTCCGATCTCTGAGGGAAATGCCACCACTCTGCCGAATGATGCGAATCCATATGTTTCTGCAGCTCCAGCCCAGGGAAATCCTTCTTCTGCTAAGAATACGATGGATTCCGTGAAGGTGATGCTTGTAAGATGGGGAAAGAGGGCTGTTGAGGCAACCAAGAAAGCCGAGGATCTTGCTGGGAACATGTGGCAGCACTTGAAAACAGGGCCTAGTTTTACTGAAGCTGCTGTGGGAAGAATTGCTCAGGGGACGAAAGTTCTTGCAGAAGGTGGTTATGAGAAGATCTTCCGGCAAACTTTTGAGAATACACCTGAAGAGAAACTTCAGAAGGCATATGCATGCTACCTGTCCACATCTGCCGGTCCTGTGATGGGAACTCTGTACATAACAACGGCTAAAATTGCCTTTTGCAGTGACAGTCCTCTTTCTTACAAAGTGGATGAGGAGACCCGATGGTGCCTTTACAAGGTGATGATCCCACTACATCACCTTAGAGCAGTGAACCCATCAACAAGCAAAGCGAAACCGCCTGAAAAATTCATACAGGTTATCTCCATTGACAATCATGAATTCTGGTTTTTGGGGTTTGTAAATTATGATGGTGCAGTGAAAATTCTTGAAGAAACCCTACAGCCCAATAGTCCGCGTGCTGCCTAA MAQPQPDPSNPLPPNPSHSDHADPVTDHLSTDSSPHPKLNPSDVAPPPMPEDWTTVPMGSQPQHPHPPPPQTQPNSEVRAPISEGNATTLPNDANPYVSAAPAQGNPSSAKNTMDSVKVMLVRWGKRAVEATKKAEDLAGNMWQHLKTGPSFTEAAVGRIAQGTKVLAEGGYEKIFRQTFENTPEEKLQKAYACYLSTSAGPVMGTLYITTAKIAFCSDSPLSYKVDEETRWCLYKVMIPLHHLRAVNPSTSKAKPPEKFIQVISIDNHEFWFLGFVNYDGAVKILEETLQPNSPRAA Homology
BLAST of CmaCh12G002200 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.6e-78 Identity = 150/266 (56.39%), Postives = 188/266 (70.68%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71 Identity = 147/294 (50.00%), Postives = 193/294 (65.65%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 241.1 bits (614), Expect = 1.6e-62 Identity = 123/216 (56.94%), Postives = 155/216 (71.76%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.0e-41 Identity = 101/265 (38.11%), Postives = 149/265 (56.23%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35 Identity = 79/200 (39.50%), Postives = 122/200 (61.00%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy TrEMBL
Match: A0A6J1KJJ7 (GEM-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111496288 PE=3 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 1.5e-169 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy TrEMBL
Match: A0A6J1GHL2 (GEM-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111454008 PE=3 SV=1) HSP 1 Score: 577.4 bits (1487), Expect = 3.4e-161 Identity = 286/296 (96.62%), Postives = 289/296 (97.64%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy TrEMBL
Match: A0A5A7VGZ5 (GEM-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004500 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144 Identity = 254/296 (85.81%), Postives = 274/296 (92.57%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy TrEMBL
Match: A0A1S3BAX8 (GEM-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103488099 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144 Identity = 254/296 (85.81%), Postives = 274/296 (92.57%), Query Frame = 0
BLAST of CmaCh12G002200 vs. ExPASy TrEMBL
Match: A0A0A0LLB0 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369810 PE=3 SV=1) HSP 1 Score: 513.8 bits (1322), Expect = 4.7e-142 Identity = 251/298 (84.23%), Postives = 274/298 (91.95%), Query Frame = 0
BLAST of CmaCh12G002200 vs. NCBI nr
Match: XP_023002452.1 (GEM-like protein 1 [Cucurbita maxima]) HSP 1 Score: 605.1 bits (1559), Expect = 3.2e-169 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CmaCh12G002200 vs. NCBI nr
Match: KAG6585359.1 (GLABRA2 expression modulator, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 580.9 bits (1496), Expect = 6.4e-162 Identity = 287/297 (96.63%), Postives = 291/297 (97.98%), Query Frame = 0
BLAST of CmaCh12G002200 vs. NCBI nr
Match: XP_023536761.1 (GEM-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 580.9 bits (1496), Expect = 6.4e-162 Identity = 285/296 (96.28%), Postives = 291/296 (98.31%), Query Frame = 0
BLAST of CmaCh12G002200 vs. NCBI nr
Match: KAG7020271.1 (GLABRA2 expression modulator, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 580.5 bits (1495), Expect = 8.4e-162 Identity = 287/296 (96.96%), Postives = 290/296 (97.97%), Query Frame = 0
BLAST of CmaCh12G002200 vs. NCBI nr
Match: XP_022951044.1 (GEM-like protein 1 [Cucurbita moschata]) HSP 1 Score: 577.4 bits (1487), Expect = 7.1e-161 Identity = 286/296 (96.62%), Postives = 289/296 (97.64%), Query Frame = 0
BLAST of CmaCh12G002200 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 294.3 bits (752), Expect = 1.1e-79 Identity = 150/266 (56.39%), Postives = 188/266 (70.68%), Query Frame = 0
BLAST of CmaCh12G002200 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 271.6 bits (693), Expect = 7.8e-73 Identity = 147/294 (50.00%), Postives = 193/294 (65.65%), Query Frame = 0
BLAST of CmaCh12G002200 vs. TAIR 10
Match: AT4G40100.1 (GRAM domain family protein ) HSP 1 Score: 216.5 bits (550), Expect = 3.0e-56 Identity = 115/216 (53.24%), Postives = 142/216 (65.74%), Query Frame = 0
BLAST of CmaCh12G002200 vs. TAIR 10
Match: AT2G22475.2 (GRAM domain family protein ) HSP 1 Score: 190.3 bits (482), Expect = 2.3e-48 Identity = 111/237 (46.84%), Postives = 146/237 (61.60%), Query Frame = 0
BLAST of CmaCh12G002200 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42 Identity = 101/265 (38.11%), Postives = 149/265 (56.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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