CmaCh12G002050 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G002050
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr12: 968242 .. 970370 (+)
RNA-Seq ExpressionCmaCh12G002050
SyntenyCmaCh12G002050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATGTCTGTTAATTCTTGTAAATGTTGAGATTTGAGCAAATCCAAAAAGGAAATTAACACGGCAAATGATCTTCAAAAGAAGAAATTCAAAAGTTCTCAGACGGTCATCTGATTCTATCATTCGCATTATTACAGAATTCCCACTTTATAAAATCTTTTCCAAATCCTGTCTGAAAGAAACAATTCGGGTTCGAGTGGTTCGGACTGTTCTGAAAAGATTGATCATCATAGTCGTTTCCCTTTAGCAAAAGTGCCTCTAATAATTCCTACAATTCAAGCTTCTTGTTGGAAAGGCAATCCTCAGCTCCAGCAGAGGAGTCTCCAGACAGGTAACAAGGGGCTGTTTGCAATCATTTGGAAAATATTTTGAAAATAGTTTTTTCTCTCCAAAATTAGTTCCAGTTCATATAAAATTGATTAAGTGGTACATTTATTCATCTTACTTTAACATTTGTGTCAAAGTAATTTTTTATACTTAGATACATAAATCTCTCATAAATTCAAAAGTTTCTAAAAATAATATTTGATATAAAATTATGTTAAGCTTTTAATTTTGTGGAAGGTAAAAATGTTTATTTTTATTTTTGATAATTCCATCATTGAAGGCGAGGAAAGAGACGAGAAATTTCACCCCAAACGCTTAGCCATGGCAATATCAATCAAAGCACGAATTCTTCTACGAGCTAATCTCACGACCCCTCTGATCATACAACATTTTAGCGTTTGGGTAAACGAACGCAATTGTTCTTGGATCCCAACTTTGCCACACATAGGTTGATGGTCAGAAGGATCAAATTTCATAACATCATCATAGGTTGCACTGTTATGGGTCGGCCACGATGAGCTTTAGTTCAGCCCATAACAATTACCCTATGACAATTACCTTCGACTGTAACGACTCAAGTCTATCGCTAGCAAATATTATCTTGTATTTGTCTTCTTTGAGCTTTCTCTTATGAACTTCCCCTCACGCGTCTGCTAGGGAGATGTTTCCACACTTTTATAAATAATCTCACGCTGTTAGGGAGATGTTTCTACACTTTTACAAATAATCTTTCATTTTCTTCCCCAACAAATGTGGAATCTCACATTGACCTAGACACTATTGTTCATGATAACAAGTCCCTTCAAACACGAATCTTCACCCATACAAGTCCCTTTCGGATGGTCAGCACCTTCGTCAAGCTTTTTGATTGGTCCAAGGTCGAGAGTTCCATTTTATGGTGACACTTGCATGCTTTATCAAATCTAGTCGTCGACTTTACCAATCGTGTGCACGTCCCTACTCAAGATAATAGTTTTAAGTATGTGCTCATGCCTAAAGCTCAAGATGAAATTTGGGTATACACCTGCTCTCTAGACACTAGTCTAAGTTTTCATTACCTCATTTGTCTCTCCAAACACCAACCTTCATTCATTTTTAGGTGCTTTCTTGCACTGTCCTTTTGTGTTATACTCTTGTGTTACTACTCTAATATCTCATCAAACGCTAAACAAAATGGGCCACAACATGCCTATTATACTCGAGGAAAGGTTGGGAGGTGCAATATGTGAGCCACCTGATAGACTACAAATTAAAACATATTTATCAATCAATAGATCAAAAGTTTGAATTTTCCGATAGTTTCAACTACATAAATTTTACTTATTTCACGAAAGTTTGTTTCTTTTTTTCATTTACGTGACAAGTCATATTCTGATAATAAATGTTTGTCCGAAAAACTAATTAATGGTTGGAACATAATTGTGAAAATAAATAAAAAAAACTAATGAGCATCTCAGCTATAAAAGGAAATACTTTCCTGCAATTTCATTTGTGCAGAAAGATGCCATTTGGCAATCCAAGTCATCAATGAACGAGTCCAATCACGTGAACTCCGAGGAGGGAAATAGAAGCAAAGCTCTATACAATTTCCTGTTCCATCAACAAGTTGAACCGTATAATTTGCATCTGAATGAATGTGAAAGTACAGAAGTGAAAGTAAAACCTGAGAAGCTTCACGTGTATTGCTCAGGAGAAACTGCCAAACCAAATCAGCGACACAGTCAGTCTGTCACAAAATGGCCTACACGCTTCGCTTGCTTCACCCAAAATATGTTATGTTCAAATCTATATAGAGATTAG

mRNA sequence

ATGCAATGCAATCCTCAGCTCCAGCAGAGGAGTCTCCAGACAGGCGAGGAAAGAGACGAGAAATTTCACCCCAAACGCTTAGCCATGGCAATATCAATCAAAGCACGAATTCTTCTACGAGCTAATCTCACGACCCCTCTGATCATACAACATTTTAGCGTTTGGAAAGATGCCATTTGGCAATCCAAGTCATCAATGAACGAGTCCAATCACGTGAACTCCGAGGAGGGAAATAGAAGCAAAGCTCTATACAATTTCCTGTTCCATCAACAAGTTGAACCGTATAATTTGCATCTGAATGAATGTGAAAGTACAGAAGTGAAAGTAAAACCTGAGAAGCTTCACGTGTATTGCTCAGGAGAAACTGCCAAACCAAATCAGCGACACAGTCAGTCTGTCACAAAATGGCCTACACGCTTCGCTTGCTTCACCCAAAATATGTTATGTTCAAATCTATATAGAGATTAG

Coding sequence (CDS)

ATGCAATGCAATCCTCAGCTCCAGCAGAGGAGTCTCCAGACAGGCGAGGAAAGAGACGAGAAATTTCACCCCAAACGCTTAGCCATGGCAATATCAATCAAAGCACGAATTCTTCTACGAGCTAATCTCACGACCCCTCTGATCATACAACATTTTAGCGTTTGGAAAGATGCCATTTGGCAATCCAAGTCATCAATGAACGAGTCCAATCACGTGAACTCCGAGGAGGGAAATAGAAGCAAAGCTCTATACAATTTCCTGTTCCATCAACAAGTTGAACCGTATAATTTGCATCTGAATGAATGTGAAAGTACAGAAGTGAAAGTAAAACCTGAGAAGCTTCACGTGTATTGCTCAGGAGAAACTGCCAAACCAAATCAGCGACACAGTCAGTCTGTCACAAAATGGCCTACACGCTTCGCTTGCTTCACCCAAAATATGTTATGTTCAAATCTATATAGAGATTAG

Protein sequence

MQCNPQLQQRSLQTGEERDEKFHPKRLAMAISIKARILLRANLTTPLIIQHFSVWKDAIWQSKSSMNESNHVNSEEGNRSKALYNFLFHQQVEPYNLHLNECESTEVKVKPEKLHVYCSGETAKPNQRHSQSVTKWPTRFACFTQNMLCSNLYRD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G002050.1CmaCh12G002050.1mRNA