CmaCh12G001840 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G001840
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr12: 845951 .. 847777 (+)
RNA-Seq ExpressionCmaCh12G001840
SyntenyCmaCh12G001840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAACCTTGCCTGCAAAGAATTATACAGAAGGATTCTGTTTGTTTCATCGCCACAGCGCCAAAATTCGCGGCCGTGAAGTTAGGGCCAAGCAATTGGTTACATCGGAGGCCAATTCTTTGAGGCTTTATGTAGGAGCAAAAGGAAAATCTCGCTTCCTCGTTATTCCTTCCGATGATTCTGAGGAACCGATTTCTTCGATTACTAAACAGCTCAACATTGTTCGTGCGGTTTCGAGAGTCGATACGCTTAGATTGCAACATGGCCATTTGAACGGCGCCAATTCCTCTTCATCTGCTTCGAATCATTCGCAGAGTTTCGAGGGATTCGAGAACAATAATCATCTTCGTCTACTGGTAAGAAATGGGGAATTAGAAAACGGGTTTAAATTTCTTGAGGATATGTTCTTTCGTGGTGAAATTCCTGATATAAATGCCTGCACTATTTTGATTCGTGATTTGTGTAAGACTGGGAAGATTAGGAAGGCCACTCGGGTTATGGAAATTTTGAAAGATTCGAGGGCTGTTCTTGATGTTAGAACTTACAATATTCTAATTAGTGGTTACTGTAAATCTGGTGAAATTGGCAGTGCTTTGAAACTTTTTGAACGAATGAGTGTCTCTCCTGATGTTGTTACTTACAATACAATCTTGCGAACTCTCTGTGGCTGTGGGAGGTTGAAGCAAGCCATGGATGTTCTTGATAGACAGCTGCAGAGTGAGTGTTATCCTGATGTGATAACTTACACTATATTGATTGAAGCAACTTGCAAGGAAAGTGGTGTTGGGAAGGCGATGAAATTGTTGGATGAAATGAGGAACAAAGGATGTAAGCCTGATGTTGTCACTTATAATGTTCTTATCAAGGGGATTTGCAAGGAAGGGAGGTTGGATGAAGCTATTAAGTTCTTGAATCATATGCCTTCTTATGGTTGCCAACCGAATACGATCACTTATAATATAATTTTGCGTAGCATGTGTAGTACCCAGCGGTGGATGGATGCCGAGAAGCTGTTGGACGATATGGTTCGGAAGGGATGTTCTCCTAGTGTTGTGACGTTCAATATCTTGATTAACTTCTTGTGTCGAAAGGGCTTGCTTGGTCGGGCTATCAATGTTTTGGAGAAAATGCCTCGGCATGGCTGTACTCCGAATTCCTTGAGCTACAAACCGTTGCTTCATGGATTCTGCAAAGAGAAAAGGATGGATCGGGCAATTGAGTTTTTGAATACCATGGTTTCGGGAGGCTGTTACCCGGATATTATGACGTATAATACTCTGTTGATAGCTTTGTGCAAAGATGGGAAGGTAGATGTTGCAGCTGAGATAGTGAATCAACTTAGAAGCAAAGGCTGCTCTCCTGTATTGATTACATACAACACTATCATTGATGGGCTCTCAAAGGTAGGCAAGACAGAAGATGCCATTAAATTTCTCGACGAGATGAAGGGAAAAGGACTCGAACCGGCTATAATTACGTACTCCTCGCTCGTCGGAGGACTGAGTAGAGGAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAGGCCAAATGCTAACACATACAACTCTATCATGTTAGGACTTTGTAACATTCAACAAACCAATCGAGCCATCGATTTCTTGGCCTACATGGTTGCCCGAGACTGTATACCGACCGAGGCTTCGTACATGATTCTCATTGAAGGATTGGCGGATGAAGGACTAGCCAAGGAGGCATTGGAGTTGCATAATGAACTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGTGGAGCAGGTGATAGTAAAAAACTCTGTTTGA

mRNA sequence

ATGGATTTAACCTTGCCTGCAAAGAATTATACAGAAGGATTCTGTTTGTTTCATCGCCACAGCGCCAAAATTCGCGGCCGTGAAGTTAGGGCCAAGCAATTGGTTACATCGGAGGCCAATTCTTTGAGGCTTTATGTAGGAGCAAAAGGAAAATCTCGCTTCCTCGTTATTCCTTCCGATGATTCTGAGGAACCGATTTCTTCGATTACTAAACAGCTCAACATTGTTCGTGCGGTTTCGAGAGTCGATACGCTTAGATTGCAACATGGCCATTTGAACGGCGCCAATTCCTCTTCATCTGCTTCGAATCATTCGCAGAGTTTCGAGGGATTCGAGAACAATAATCATCTTCGTCTACTGGTAAGAAATGGGGAATTAGAAAACGGGTTTAAATTTCTTGAGGATATGTTCTTTCGTGGTGAAATTCCTGATATAAATGCCTGCACTATTTTGATTCGTGATTTGTGTAAGACTGGGAAGATTAGGAAGGCCACTCGGGTTATGGAAATTTTGAAAGATTCGAGGGCTGTTCTTGATGTTAGAACTTACAATATTCTAATTAGTGGTTACTGTAAATCTGGTGAAATTGGCAGTGCTTTGAAACTTTTTGAACGAATGAGTGTCTCTCCTGATGTTGTTACTTACAATACAATCTTGCGAACTCTCTGTGGCTGTGGGAGGTTGAAGCAAGCCATGGATGTTCTTGATAGACAGCTGCAGAGTGAGTGTTATCCTGATGTGATAACTTACACTATATTGATTGAAGCAACTTGCAAGGAAAGTGGTGTTGGGAAGGCGATGAAATTGTTGGATGAAATGAGGAACAAAGGATGTAAGCCTGATGTTGTCACTTATAATGTTCTTATCAAGGGGATTTGCAAGGAAGGGAGGTTGGATGAAGCTATTAAGTTCTTGAATCATATGCCTTCTTATGGTTGCCAACCGAATACGATCACTTATAATATAATTTTGCGTAGCATGTGTAGTACCCAGCGGTGGATGGATGCCGAGAAGCTGTTGGACGATATGGTTCGGAAGGGATGTTCTCCTAGTGTTGTGACGTTCAATATCTTGATTAACTTCTTGTGTCGAAAGGGCTTGCTTGGTCGGGCTATCAATGTTTTGGAGAAAATGCCTCGGCATGGCTGTACTCCGAATTCCTTGAGCTACAAACCGTTGCTTCATGGATTCTGCAAAGAGAAAAGGATGGATCGGGCAATTGAGTTTTTGAATACCATGGTTTCGGGAGGCTGTTACCCGGATATTATGACGTATAATACTCTGTTGATAGCTTTGTGCAAAGATGGGAAGGTAGATGTTGCAGCTGAGATAGTGAATCAACTTAGAAGCAAAGGCTGCTCTCCTGTATTGATTACATACAACACTATCATTGATGGGCTCTCAAAGGTAGGCAAGACAGAAGATGCCATTAAATTTCTCGACGAGATGAAGGGAAAAGGACTCGAACCGGCTATAATTACGTACTCCTCGCTCGTCGGAGGACTGAGTAGAGGAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAGGCCAAATGCTAACACATACAACTCTATCATGTTAGGACTTTGTAACATTCAACAAACCAATCGAGCCATCGATTTCTTGGCCTACATGGTTGCCCGAGACTGTATACCGACCGAGGCTTCGTACATGATTCTCATTGAAGGATTGGCGGATGAAGGACTAGCCAAGGAGGCATTGGAGTTGCATAATGAACTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGTGGAGCAGGTGATAGTAAAAAACTCTGTTTGA

Coding sequence (CDS)

ATGGATTTAACCTTGCCTGCAAAGAATTATACAGAAGGATTCTGTTTGTTTCATCGCCACAGCGCCAAAATTCGCGGCCGTGAAGTTAGGGCCAAGCAATTGGTTACATCGGAGGCCAATTCTTTGAGGCTTTATGTAGGAGCAAAAGGAAAATCTCGCTTCCTCGTTATTCCTTCCGATGATTCTGAGGAACCGATTTCTTCGATTACTAAACAGCTCAACATTGTTCGTGCGGTTTCGAGAGTCGATACGCTTAGATTGCAACATGGCCATTTGAACGGCGCCAATTCCTCTTCATCTGCTTCGAATCATTCGCAGAGTTTCGAGGGATTCGAGAACAATAATCATCTTCGTCTACTGGTAAGAAATGGGGAATTAGAAAACGGGTTTAAATTTCTTGAGGATATGTTCTTTCGTGGTGAAATTCCTGATATAAATGCCTGCACTATTTTGATTCGTGATTTGTGTAAGACTGGGAAGATTAGGAAGGCCACTCGGGTTATGGAAATTTTGAAAGATTCGAGGGCTGTTCTTGATGTTAGAACTTACAATATTCTAATTAGTGGTTACTGTAAATCTGGTGAAATTGGCAGTGCTTTGAAACTTTTTGAACGAATGAGTGTCTCTCCTGATGTTGTTACTTACAATACAATCTTGCGAACTCTCTGTGGCTGTGGGAGGTTGAAGCAAGCCATGGATGTTCTTGATAGACAGCTGCAGAGTGAGTGTTATCCTGATGTGATAACTTACACTATATTGATTGAAGCAACTTGCAAGGAAAGTGGTGTTGGGAAGGCGATGAAATTGTTGGATGAAATGAGGAACAAAGGATGTAAGCCTGATGTTGTCACTTATAATGTTCTTATCAAGGGGATTTGCAAGGAAGGGAGGTTGGATGAAGCTATTAAGTTCTTGAATCATATGCCTTCTTATGGTTGCCAACCGAATACGATCACTTATAATATAATTTTGCGTAGCATGTGTAGTACCCAGCGGTGGATGGATGCCGAGAAGCTGTTGGACGATATGGTTCGGAAGGGATGTTCTCCTAGTGTTGTGACGTTCAATATCTTGATTAACTTCTTGTGTCGAAAGGGCTTGCTTGGTCGGGCTATCAATGTTTTGGAGAAAATGCCTCGGCATGGCTGTACTCCGAATTCCTTGAGCTACAAACCGTTGCTTCATGGATTCTGCAAAGAGAAAAGGATGGATCGGGCAATTGAGTTTTTGAATACCATGGTTTCGGGAGGCTGTTACCCGGATATTATGACGTATAATACTCTGTTGATAGCTTTGTGCAAAGATGGGAAGGTAGATGTTGCAGCTGAGATAGTGAATCAACTTAGAAGCAAAGGCTGCTCTCCTGTATTGATTACATACAACACTATCATTGATGGGCTCTCAAAGGTAGGCAAGACAGAAGATGCCATTAAATTTCTCGACGAGATGAAGGGAAAAGGACTCGAACCGGCTATAATTACGTACTCCTCGCTCGTCGGAGGACTGAGTAGAGGAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAGGCCAAATGCTAACACATACAACTCTATCATGTTAGGACTTTGTAACATTCAACAAACCAATCGAGCCATCGATTTCTTGGCCTACATGGTTGCCCGAGACTGTATACCGACCGAGGCTTCGTACATGATTCTCATTGAAGGATTGGCGGATGAAGGACTAGCCAAGGAGGCATTGGAGTTGCATAATGAACTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGTGGAGCAGGTGATAGTAAAAAACTCTGTTTGA

Protein sequence

MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSDDSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVEQVIVKNSV
Homology
BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 8.4e-228
Identity = 399/608 (65.62%), Postives = 477/608 (78.45%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCL---FHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVI 60
           MDL +   +  EGFCL   FHR   +    +V  +   TS + S ++ +G++ ++R +++
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR---TSGSISSKIPLGSRKRNRLVLV 60

Query: 61  PSDDSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHL 120
            +       +S  +   +     + +TL   + + NG N   S+ N S + E  E+NNHL
Sbjct: 61  SA-------ASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFALEDVESNNHL 120

Query: 121 RLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAV 180
           R +VR GELE GFKFLE+M + G +PDI  CT LIR  C+ GK RKA +++EIL+ S AV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180

Query: 181 LDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDR 240
            DV TYN++ISGYCK+GEI +AL + +RMSVSPDVVTYNTILR+LC  G+LKQAM+VLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240

Query: 241 QLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGR 300
            LQ +CYPDVITYTILIEATC++SGVG AMKLLDEMR++GC PDVVTYNVL+ GICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300

Query: 301 LDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNI 360
           LDEAIKFLN MPS GCQPN IT+NIILRSMCST RWMDAEKLL DM+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360

Query: 361 LINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGG 420
           LINFLCRKGLLGRAI++LEKMP+HGC PNSLSY PLLHGFCKEK+MDRAIE+L  MVS G
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420

Query: 421 CYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI 480
           CYPDI+TYNT+L ALCKDGKV+ A EI+NQL SKGCSPVLITYNT+IDGL+K GKT  AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480

Query: 481 KFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGL 540
           K LDEM+ K L+P  ITYSSLVGGLSR GKVDEAI FFH+ E MG+RPNA T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540

Query: 541 CNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS 600
           C  +QT+RAIDFL +M+ R C P E SY ILIEGLA EG+AKEALEL NELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597

Query: 601 SVEQVIVK 606
           S EQV  K
Sbjct: 601 SAEQVAGK 597

BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 4.7e-114
Identity = 216/505 (42.77%), Postives = 303/505 (60.00%), Query Frame = 0

Query: 104 HSQSFEGFENNNHLRLL---VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGK 163
           HSQS  GF +   L++     R+G        LE M  +G  PD+  CT LI+       
Sbjct: 81  HSQSL-GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN 140

Query: 164 IRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNT 223
           I KA RVMEIL +     DV  YN LI+G+CK   I  A ++ +RM     SPD VTYN 
Sbjct: 141 IPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 200

Query: 224 ILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKG 283
           ++ +LC  G+L  A+ VL++ L   C P VITYTILIEAT  E GV +A+KL+DEM ++G
Sbjct: 201 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 260

Query: 284 CKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAE 343
            KPD+ TYN +I+G+CKEG +D A + + ++   GC+P+ I+YNI+LR++ +  +W + E
Sbjct: 261 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 320

Query: 344 KLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGF 403
           KL+  M  + C P+VVT++ILI  LCR G +  A+N+L+ M   G TP++ SY PL+  F
Sbjct: 321 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 380

Query: 404 CKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVL 463
           C+E R+D AIEFL TM+S GC PDI+ YNT+L  LCK+GK D A EI  +L   GCSP  
Sbjct: 381 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 440

Query: 464 ITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD 523
            +YNT+   L   G    A+  + EM   G++P  ITY+S++  L R G VDEA     D
Sbjct: 441 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 500

Query: 524 LEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGL 583
           +      P+  TYN ++LG C   +   AI+ L  MV   C P E +Y +LIEG+   G 
Sbjct: 501 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 560

Query: 584 AKEALELHNELCSRGVVKKSSVEQV 603
             EA+EL N+L     + + S +++
Sbjct: 561 RAEAMELANDLVRIDAISEYSFKRL 583

BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match: Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.2e-86
Identity = 169/479 (35.28%), Postives = 266/479 (55.53%), Query Frame = 0

Query: 113 NNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILK 172
           NN  L  L  NG+L +  K +E M    ++P   +C+ L+R L +  ++ KA  ++ ++ 
Sbjct: 107 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166

Query: 173 DSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVS---PDVVTYNTILRTLCGCGRLK 232
            S  V D  TYN++I   CK G I +AL L E MS+S   PDV+TYNT++R +   G  +
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226

Query: 233 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 292
           QA+     QLQ+ C P +ITYT+L+E  C+  G  +A+++L++M  +GC PD+VTYN L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286

Query: 293 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 352
              C+ G L+E    + H+ S+G + NT+TYN +L S+CS + W + E++L+ M +    
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346

Query: 353 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 412
           P+V+T+NILIN                                   G CK + + RAI+F
Sbjct: 347 PTVITYNILIN-----------------------------------GLCKARLLSRAIDF 406

Query: 413 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 472
              M+   C PDI+TYNT+L A+ K+G VD A E++  L++  C P LITYN++IDGL+K
Sbjct: 407 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 466

Query: 473 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 532
            G  + A++   +M   G+ P  IT  SL+ G  R   V+EA     +    G     +T
Sbjct: 467 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 526

Query: 533 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNEL 589
           Y  ++ GLC  ++   AI+ +  M+   C P E  Y  +++G+ + G+  EA++L  +L
Sbjct: 527 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 550

BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-84
Identity = 172/486 (35.39%), Postives = 279/486 (57.41%), Query Frame = 0

Query: 126 LENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNI 185
           L + F  LE +   G  P++   T L+ DLCK  +++KA RV+E++  S  + D   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 186 LISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSE 245
           L++  CK G +G A++L E+M       + VTYN ++R LC  G L Q++  ++R +Q  
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 246 CYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAI 305
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 306 KFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFL 365
                +P+ G + N ++YNI+LR +C   RW +A  LL +M     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 366 CRKGLLGRAINVLEKMPR--HGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 425
              G   +A+ VL++M +  H     + SY P++   CKE ++D  ++ L+ M+   C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 426 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 485
           +  TYN +      + KV  A  I+  L +K        Y ++I  L + G T  A + L
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 486 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEM-GVRPNANTYNSIMLGLCN 545
            EM   G +P   TYS+L+ GL   G    A+     +EE    +P  + +N+++LGLC 
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 546 IQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSV 605
           I++T+ A++    MV +  +P E +Y IL+EG+A E   + A E+ +EL  R V+ +++V
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.3e-81
Identity = 160/488 (32.79%), Postives = 265/488 (54.30%), Query Frame = 0

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATR-VMEILKDSRAVLD 180
           +  G+L+   +  E M   G      +  +++   CK G++  A   + E+        D
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 181 VRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLD 240
             T+N L++G CK+G +  A+++ + M      PDV TYN+++  LC  G +K+A++VLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 241 RQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEG 300
           + +  +C P+ +TY  LI   CKE+ V +A +L   + +KG  PDV T+N LI+G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 301 RLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFN 360
               A++    M S GC+P+  TYN+++ S+CS  +  +A  +L  M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 361 ILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSG 420
            LI+  C+      A  + ++M  HG + NS++Y  L+ G CK +R++ A + ++ M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 421 GCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDA 480
           G  PD  TYN+LL   C+ G +  AA+IV  + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 481 IKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD-LEEMGVRPNANTYNSIML 540
            K L  ++ KG+      Y+ ++ GL R  K  EAI  F + LE+    P+A +Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 541 GLCNIQQTNR-AIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVV 600
           GLCN     R A+DFL  ++ +  +P  +S  +L EGL    + +  ++L N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 601 KKSSVEQV 603
            +  V  V
Sbjct: 715 SEEEVSMV 722

BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match: A0A6J1KMH6 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111495955 PE=4 SV=1)

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD
Sbjct: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
           DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
           VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180

Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
           RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240

Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
           SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300

Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
           AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
           FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP
Sbjct: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420

Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
           DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480

Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
           DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540

Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
           QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600

Query: 601 QVIVKNSV 609
           QVIVKNSV
Sbjct: 601 QVIVKNSV 608

BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match: A0A6J1GH96 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111454158 PE=4 SV=1)

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 591/608 (97.20%), Postives = 601/608 (98.85%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAKNYT+GFCLF RHSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1   MDLTLPAKNYTDGFCLFQRHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
           DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61  DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
           VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180

Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
           RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240

Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
           SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300

Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
           AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTKRWMDAEKLLGDMVRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
           FLCRKGLLGRAI+VLEKMPRHGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPRHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420

Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
           DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480

Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
           DEMKGKGLEPAIITYSSLVGGLSRGGK+DEAIAFFHDLEEMGVRPNA TYNSIMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKIDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540

Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
           QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVE 600

Query: 601 QVIVKNSV 609
           QV+VKNSV
Sbjct: 601 QVMVKNSV 608

BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match: A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 1.2e-290
Identity = 512/621 (82.45%), Postives = 553/621 (89.05%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MD+TLPAK+YT+GFCLF R S + RGR+VRA   VTSEANSLRLYVG KGK+RFLV+P  
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  D----SEEPISSITKQLNIVRAVSRVDTL----RLQ------HGHLNGANSSSSASNHSQ 120
           D     E+    I+KQL+IVRA+SRVDT     RLQ      HGHLNG+NSSSSASNHSQ
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120

Query: 121 SFEGFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATR 180
           SFE FENNNHLR LVRNGELE GFKF+E+M   G+IPDI ACT LIR LCKTGK RKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180

Query: 181 VMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCG 240
           VMEIL+DS AV DV TYN+LISGYCKSGEIGSAL+L +RMSVSPDVVTYNTILRTLC  G
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240

Query: 241 RLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYN 300
           +LKQAM+VLDRQLQ ECYPDVITYTILIEATCKESGVG+AMKLLDEM+NKGCKPDVVT+N
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300

Query: 301 VLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRK 360
           VLI GICKEGRLDEAIKFLN+MPSYGCQPN IT+NIILRSMCST RWMDAEKLL +MVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAI+VLEKMP+HGCTPNSLSY PLLHGFCKEK+MDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420

Query: 421 IEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDG 480
           IE+L+ MVS GCYPDI+TYNTLL ALCKDGKVDVA EI+NQL +KGCSPVLITYNT+IDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPN 540
           LSKVGKTEDAIK LDEMKGKGL+P IITYSSLV GLSR GKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540

Query: 541 ANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHN 600
           A TYNSIMLGLC ++QT+RAIDFLAYMVAR C PTEASYMILIEGLA EGLAKEALEL N
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600

Query: 601 ELCSRGVVKKSSVEQVIVKNS 608
           ELCSRGVVKKSS EQV+VKNS
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNS 621

BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match: A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 5.2e-281
Identity = 499/618 (80.74%), Postives = 540/618 (87.38%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAK+YT+GFCLFHRH+ K R R V AK  V+SE NSLRL+VG KGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTL----RLQHG------HLNG-ANSSSSASNHSQSFE 120
            S+E          +VRAV RVDT     RL HG      HLNG ++SSSS+SN+SQS E
Sbjct: 61  GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120

Query: 121 GFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVME 180
            FENNNHLR LVRNGELE GFKFLEDM +RG+IPDI ACT LIR LCKTGK RKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180

Query: 181 ILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLK 240
           IL+DS AV DV TYN+LISGYCKSGEIGSAL+L +RMSVSPDVVTYNTILRTLC  G+LK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 300
           QAM+VLDRQLQ ECYPDVITYTILIEATCKESGVG+AMKLLDEMR+KGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 360
            GICKEGRLDEAIKFLNHMPSYGCQPN IT+NIILRSMCST RWMDAEKLL +M+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 420
           PSVVTFNILINFLCRKGL+GRAI+VLEKMP+HGCTPNSLSY PLLHGFCKEK+MDRAIE+
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420

Query: 421 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 480
           L+ MVS GCYPDI+TYNTLL ALCKDGKVD+A EI+NQL SKGCSPVLITYNT+IDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 540
           VGKT DAIK LDEMKGKGL+P IITYS+LVGGLSR GKVDEAIAFFHDLEEMGVRPNA T
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540

Query: 541 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELC 600
           YNSIMLGLC  +QT RAIDFLAYMVAR C PTEASYMILIEGLA EGL KEALEL +EL 
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600

Query: 601 SRGVVKKSSVEQVIVKNS 608
           SRGVV+KSS EQV+VKN+
Sbjct: 601 SRGVVRKSSAEQVVVKNT 609

BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match: A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 5.2e-281
Identity = 499/618 (80.74%), Postives = 540/618 (87.38%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAK+YT+GFCLFHRH+ K R R V AK  V+SE NSLRL+VG KGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTL----RLQHG------HLNG-ANSSSSASNHSQSFE 120
            S+E          +VRAV RVDT     RL HG      HLNG ++SSSS+SN+SQS E
Sbjct: 61  GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120

Query: 121 GFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVME 180
            FENNNHLR LVRNGELE GFKFLEDM +RG+IPDI ACT LIR LCKTGK RKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180

Query: 181 ILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLK 240
           IL+DS AV DV TYN+LISGYCKSGEIGSAL+L +RMSVSPDVVTYNTILRTLC  G+LK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 300
           QAM+VLDRQLQ ECYPDVITYTILIEATCKESGVG+AMKLLDEMR+KGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 360
            GICKEGRLDEAIKFLNHMPSYGCQPN IT+NIILRSMCST RWMDAEKLL +M+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 420
           PSVVTFNILINFLCRKGL+GRAI+VLEKMP+HGCTPNSLSY PLLHGFCKEK+MDRAIE+
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420

Query: 421 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 480
           L+ MVS GCYPDI+TYNTLL ALCKDGKVD+A EI+NQL SKGCSPVLITYNT+IDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 540
           VGKT DAIK LDEMKGKGL+P IITYS+LVGGLSR GKVDEAIAFFHDLEEMGVRPNA T
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540

Query: 541 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELC 600
           YNSIMLGLC  +QT RAIDFLAYMVAR C PTEASYMILIEGLA EGL KEALEL +EL 
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600

Query: 601 SRGVVKKSSVEQVIVKNS 608
           SRGVV+KSS EQV+VKN+
Sbjct: 601 SRGVVRKSSAEQVVVKNT 609

BLAST of CmaCh12G001840 vs. NCBI nr
Match: XP_023001920.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima])

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD
Sbjct: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
           DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
           VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180

Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
           RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240

Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
           SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300

Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
           AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
           FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP
Sbjct: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420

Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
           DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480

Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
           DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540

Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
           QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600

Query: 601 QVIVKNSV 609
           QVIVKNSV
Sbjct: 601 QVIVKNSV 608

BLAST of CmaCh12G001840 vs. NCBI nr
Match: XP_022951268.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 591/608 (97.20%), Postives = 601/608 (98.85%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAKNYT+GFCLF RHSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1   MDLTLPAKNYTDGFCLFQRHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
           DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61  DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
           VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180

Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
           RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240

Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
           SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300

Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
           AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTKRWMDAEKLLGDMVRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
           FLCRKGLLGRAI+VLEKMPRHGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPRHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420

Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
           DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480

Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
           DEMKGKGLEPAIITYSSLVGGLSRGGK+DEAIAFFHDLEEMGVRPNA TYNSIMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKIDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540

Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
           QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVE 600

Query: 601 QVIVKNSV 609
           QV+VKNSV
Sbjct: 601 QVMVKNSV 608

BLAST of CmaCh12G001840 vs. NCBI nr
Match: XP_023538361.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 587/608 (96.55%), Postives = 599/608 (98.52%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAKNYT+GFCLF RHSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1   MDLTLPAKNYTDGFCLFRRHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
           DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61  DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
           VRNGELENGFKFLE+MFFR EIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLENMFFRDEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180

Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
           RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240

Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
           SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300

Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
           AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTERWMDAEKLLADMVRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
           FLCRKGLLGRAI+VLEKMPRHGC PNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPRHGCIPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420

Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
           DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480

Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
           DEMKGKGLEPAIITYSSLVGGLSRGGK+DEAIAFFHDLEEMGVRPNA TYN+IMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKIDEAIAFFHDLEEMGVRPNAITYNAIMLGLCKV 540

Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
           +QTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE
Sbjct: 541 RQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600

Query: 601 QVIVKNSV 609
           QV+VKNSV
Sbjct: 601 QVMVKNSV 608

BLAST of CmaCh12G001840 vs. NCBI nr
Match: KAG7020236.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 579/601 (96.34%), Postives = 591/601 (98.34%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
           MDLTLPAKNYT+GFCLF  HSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1   MDLTLPAKNYTDGFCLFQCHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60

Query: 61  DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
           DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQS  GFENNNHLRLL
Sbjct: 61  DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSSNGFENNNHLRLL 120

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
           VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180

Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
           RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240

Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
           SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300

Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
           AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTERWMDAEKLLADMVRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
           FLCRKGLLGRAI+VLEKMP+HGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPQHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420

Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
           DIM+YNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMSYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480

Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
           DEMKGKGLEPAIITY+SLVGGLSRGGKVDEAIAFFHDLEEMGVRPNA TYNSIMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYASLVGGLSRGGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540

Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
           +QTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VE
Sbjct: 541 RQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVE 600

Query: 601 Q 602
           Q
Sbjct: 601 Q 601

BLAST of CmaCh12G001840 vs. NCBI nr
Match: KAG6585323.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 566/590 (95.93%), Postives = 578/590 (97.97%), Query Frame = 0

Query: 19  RHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSDDSEEPISSITKQLNIVRA 78
           R  AKIRGREVRAKQL TSEANSLRL+VGAKGKSRFLVIPSDDSEEPISSITK LNIVRA
Sbjct: 36  RSPAKIRGREVRAKQLFTSEANSLRLHVGAKGKSRFLVIPSDDSEEPISSITKHLNIVRA 95

Query: 79  VSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLLVRNGELENGFKFLEDMFF 138
           VSRVDTLRLQHGHLNGANSSSSASNHSQS  GFENNNHLRLLVRNGELENGFKFLEDMFF
Sbjct: 96  VSRVDTLRLQHGHLNGANSSSSASNHSQSSNGFENNNHLRLLVRNGELENGFKFLEDMFF 155

Query: 139 RGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGS 198
           RGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGS
Sbjct: 156 RGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGS 215

Query: 199 ALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATC 258
           ALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATC
Sbjct: 216 ALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATC 275

Query: 259 KESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTI 318
           KESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTI
Sbjct: 276 KESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTI 335

Query: 319 TYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKM 378
           TYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILINFLCRKGLLGRAI+VLEKM
Sbjct: 336 TYNIILRSMCSTERWMDAEKLLADMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 395

Query: 379 PRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKV 438
           P+HGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYPDIM+YNTLLIALCKDGKV
Sbjct: 396 PQHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYPDIMSYNTLLIALCKDGKV 455

Query: 439 DVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSL 498
           DVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FLDEMKGKGLEPAIITY+SL
Sbjct: 456 DVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFLDEMKGKGLEPAIITYASL 515

Query: 499 VGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDC 558
           VGGLSRGGKVDEAIAFFHDLEEMGVRPNA TYNSIMLGLC ++QTNRAIDFLAYMVARDC
Sbjct: 516 VGGLSRGGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTNRAIDFLAYMVARDC 575

Query: 559 IPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVEQVIVKNSV 609
           IPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VEQV+VK SV
Sbjct: 576 IPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVEQVMVKTSV 625

BLAST of CmaCh12G001840 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 791.2 bits (2042), Expect = 5.9e-229
Identity = 399/608 (65.62%), Postives = 477/608 (78.45%), Query Frame = 0

Query: 1   MDLTLPAKNYTEGFCL---FHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVI 60
           MDL +   +  EGFCL   FHR   +    +V  +   TS + S ++ +G++ ++R +++
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR---TSGSISSKIPLGSRKRNRLVLV 60

Query: 61  PSDDSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHL 120
            +       +S  +   +     + +TL   + + NG N   S+ N S + E  E+NNHL
Sbjct: 61  SA-------ASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFALEDVESNNHL 120

Query: 121 RLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAV 180
           R +VR GELE GFKFLE+M + G +PDI  CT LIR  C+ GK RKA +++EIL+ S AV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180

Query: 181 LDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDR 240
            DV TYN++ISGYCK+GEI +AL + +RMSVSPDVVTYNTILR+LC  G+LKQAM+VLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240

Query: 241 QLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGR 300
            LQ +CYPDVITYTILIEATC++SGVG AMKLLDEMR++GC PDVVTYNVL+ GICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300

Query: 301 LDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNI 360
           LDEAIKFLN MPS GCQPN IT+NIILRSMCST RWMDAEKLL DM+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360

Query: 361 LINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGG 420
           LINFLCRKGLLGRAI++LEKMP+HGC PNSLSY PLLHGFCKEK+MDRAIE+L  MVS G
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420

Query: 421 CYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI 480
           CYPDI+TYNT+L ALCKDGKV+ A EI+NQL SKGCSPVLITYNT+IDGL+K GKT  AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480

Query: 481 KFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGL 540
           K LDEM+ K L+P  ITYSSLVGGLSR GKVDEAI FFH+ E MG+RPNA T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540

Query: 541 CNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS 600
           C  +QT+RAIDFL +M+ R C P E SY ILIEGLA EG+AKEALEL NELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597

Query: 601 SVEQVIVK 606
           S EQV  K
Sbjct: 601 SAEQVAGK 597

BLAST of CmaCh12G001840 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 413.3 bits (1061), Expect = 3.4e-115
Identity = 216/505 (42.77%), Postives = 303/505 (60.00%), Query Frame = 0

Query: 104 HSQSFEGFENNNHLRLL---VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGK 163
           HSQS  GF +   L++     R+G        LE M  +G  PD+  CT LI+       
Sbjct: 81  HSQSL-GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN 140

Query: 164 IRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNT 223
           I KA RVMEIL +     DV  YN LI+G+CK   I  A ++ +RM     SPD VTYN 
Sbjct: 141 IPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 200

Query: 224 ILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKG 283
           ++ +LC  G+L  A+ VL++ L   C P VITYTILIEAT  E GV +A+KL+DEM ++G
Sbjct: 201 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 260

Query: 284 CKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAE 343
            KPD+ TYN +I+G+CKEG +D A + + ++   GC+P+ I+YNI+LR++ +  +W + E
Sbjct: 261 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 320

Query: 344 KLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGF 403
           KL+  M  + C P+VVT++ILI  LCR G +  A+N+L+ M   G TP++ SY PL+  F
Sbjct: 321 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 380

Query: 404 CKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVL 463
           C+E R+D AIEFL TM+S GC PDI+ YNT+L  LCK+GK D A EI  +L   GCSP  
Sbjct: 381 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 440

Query: 464 ITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD 523
            +YNT+   L   G    A+  + EM   G++P  ITY+S++  L R G VDEA     D
Sbjct: 441 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 500

Query: 524 LEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGL 583
           +      P+  TYN ++LG C   +   AI+ L  MV   C P E +Y +LIEG+   G 
Sbjct: 501 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 560

Query: 584 AKEALELHNELCSRGVVKKSSVEQV 603
             EA+EL N+L     + + S +++
Sbjct: 561 RAEAMELANDLVRIDAISEYSFKRL 583

BLAST of CmaCh12G001840 vs. TAIR 10
Match: AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 320.5 bits (820), Expect = 3.0e-87
Identity = 169/479 (35.28%), Postives = 266/479 (55.53%), Query Frame = 0

Query: 113 NNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILK 172
           NN  L  L  NG+L +  K +E M    ++P   +C+ L+R L +  ++ KA  ++ ++ 
Sbjct: 107 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166

Query: 173 DSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVS---PDVVTYNTILRTLCGCGRLK 232
            S  V D  TYN++I   CK G I +AL L E MS+S   PDV+TYNT++R +   G  +
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226

Query: 233 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 292
           QA+     QLQ+ C P +ITYT+L+E  C+  G  +A+++L++M  +GC PD+VTYN L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286

Query: 293 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 352
              C+ G L+E    + H+ S+G + NT+TYN +L S+CS + W + E++L+ M +    
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346

Query: 353 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 412
           P+V+T+NILIN                                   G CK + + RAI+F
Sbjct: 347 PTVITYNILIN-----------------------------------GLCKARLLSRAIDF 406

Query: 413 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 472
              M+   C PDI+TYNT+L A+ K+G VD A E++  L++  C P LITYN++IDGL+K
Sbjct: 407 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 466

Query: 473 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 532
            G  + A++   +M   G+ P  IT  SL+ G  R   V+EA     +    G     +T
Sbjct: 467 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 526

Query: 533 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNEL 589
           Y  ++ GLC  ++   AI+ +  M+   C P E  Y  +++G+ + G+  EA++L  +L
Sbjct: 527 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 550

BLAST of CmaCh12G001840 vs. TAIR 10
Match: AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 315.8 bits (808), Expect = 7.3e-86
Identity = 172/486 (35.39%), Postives = 279/486 (57.41%), Query Frame = 0

Query: 126 LENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNI 185
           L + F  LE +   G  P++   T L+ DLCK  +++KA RV+E++  S  + D   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 186 LISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSE 245
           L++  CK G +G A++L E+M       + VTYN ++R LC  G L Q++  ++R +Q  
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 246 CYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAI 305
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 306 KFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFL 365
                +P+ G + N ++YNI+LR +C   RW +A  LL +M     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 366 CRKGLLGRAINVLEKMPR--HGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 425
              G   +A+ VL++M +  H     + SY P++   CKE ++D  ++ L+ M+   C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 426 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 485
           +  TYN +      + KV  A  I+  L +K        Y ++I  L + G T  A + L
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 486 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEM-GVRPNANTYNSIMLGLCN 545
            EM   G +P   TYS+L+ GL   G    A+     +EE    +P  + +N+++LGLC 
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 546 IQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSV 605
           I++T+ A++    MV +  +P E +Y IL+EG+A E   + A E+ +EL  R V+ +++V
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of CmaCh12G001840 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 303.5 bits (776), Expect = 3.8e-82
Identity = 160/488 (32.79%), Postives = 265/488 (54.30%), Query Frame = 0

Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATR-VMEILKDSRAVLD 180
           +  G+L+   +  E M   G      +  +++   CK G++  A   + E+        D
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 181 VRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLD 240
             T+N L++G CK+G +  A+++ + M      PDV TYN+++  LC  G +K+A++VLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 241 RQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEG 300
           + +  +C P+ +TY  LI   CKE+ V +A +L   + +KG  PDV T+N LI+G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 301 RLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFN 360
               A++    M S GC+P+  TYN+++ S+CS  +  +A  +L  M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 361 ILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSG 420
            LI+  C+      A  + ++M  HG + NS++Y  L+ G CK +R++ A + ++ M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 421 GCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDA 480
           G  PD  TYN+LL   C+ G +  AA+IV  + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 481 IKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD-LEEMGVRPNANTYNSIML 540
            K L  ++ KG+      Y+ ++ GL R  K  EAI  F + LE+    P+A +Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 541 GLCNIQQTNR-AIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVV 600
           GLCN     R A+DFL  ++ +  +P  +S  +L EGL    + +  ++L N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 601 KKSSVEQV 603
            +  V  V
Sbjct: 715 SEEEVSMV 722

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3EDF88.4e-22865.63Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR004.7e-11442.77Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
Q9FRS44.2e-8635.28Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... [more]
A3KPF81.0e-8435.39Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q9LFF15.3e-8132.79Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1KMH60.0e+00100.00pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... [more]
A0A6J1GH960.0e+0097.20pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... [more]
A0A6J1BSC21.2e-29082.45pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... [more]
A0A5A7VFH15.2e-28180.74Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BB355.2e-28180.74pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... [more]
Match NameE-valueIdentityDescription
XP_023001920.10.0e+00100.00pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima][more]
XP_022951268.10.0e+0097.20pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata][more]
XP_023538361.10.0e+0096.55pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... [more]
KAG7020236.10.0e+0096.34Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6585323.10.0e+0095.93Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
AT1G09900.15.9e-22965.63Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G04760.13.4e-11542.77Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G08610.13.0e-8735.28Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G79080.17.3e-8635.39Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.13.8e-8232.79Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 148..173
e-value: 0.96
score: 9.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 283..317
e-value: 3.1E-10
score: 37.6
coord: 389..422
e-value: 3.5E-7
score: 28.0
coord: 458..490
e-value: 2.1E-9
score: 35.0
coord: 529..562
e-value: 2.6E-4
score: 18.9
coord: 424..455
e-value: 1.4E-7
score: 29.2
coord: 182..207
e-value: 3.1E-8
score: 31.3
coord: 248..282
e-value: 1.5E-7
score: 29.1
coord: 493..527
e-value: 2.0E-7
score: 28.8
coord: 353..386
e-value: 9.9E-8
score: 29.7
coord: 213..247
e-value: 5.6E-6
score: 24.2
coord: 318..352
e-value: 2.9E-9
score: 34.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 178..207
e-value: 7.9E-12
score: 44.7
coord: 417..447
e-value: 7.4E-9
score: 35.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 525..573
e-value: 2.1E-9
score: 37.5
coord: 280..329
e-value: 7.9E-19
score: 67.6
coord: 350..399
e-value: 1.2E-13
score: 51.0
coord: 458..503
e-value: 2.3E-13
score: 50.1
coord: 210..259
e-value: 5.2E-13
score: 49.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 12.484979
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 246..280
score: 12.441133
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 561..595
score: 9.350046
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..315
score: 14.227825
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 386..420
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 179..209
score: 11.586152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..385
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..245
score: 11.334042
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 491..525
score: 11.816339
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 526..560
score: 9.678885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..490
score: 12.616514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 316..350
score: 12.616514
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 309..448
e-value: 5.1E-44
score: 152.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 66..238
e-value: 1.5E-29
score: 105.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 449..520
e-value: 1.3E-20
score: 75.7
coord: 521..591
e-value: 9.9E-14
score: 53.3
coord: 239..308
e-value: 4.3E-26
score: 93.6
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 67..605
NoneNo IPR availablePANTHERPTHR47932:SF45OS02G0565400 PROTEINcoord: 67..605

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G001840.1CmaCh12G001840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding