Homology
BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 791.2 bits (2042), Expect = 8.4e-228
Identity = 399/608 (65.62%), Postives = 477/608 (78.45%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCL---FHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVI 60
MDL + + EGFCL FHR + +V + TS + S ++ +G++ ++R +++
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR---TSGSISSKIPLGSRKRNRLVLV 60
Query: 61 PSDDSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHL 120
+ +S + + + +TL + + NG N S+ N S + E E+NNHL
Sbjct: 61 SA-------ASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFALEDVESNNHL 120
Query: 121 RLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAV 180
R +VR GELE GFKFLE+M + G +PDI CT LIR C+ GK RKA +++EIL+ S AV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180
Query: 181 LDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDR 240
DV TYN++ISGYCK+GEI +AL + +RMSVSPDVVTYNTILR+LC G+LKQAM+VLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240
Query: 241 QLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGR 300
LQ +CYPDVITYTILIEATC++SGVG AMKLLDEMR++GC PDVVTYNVL+ GICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300
Query: 301 LDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNI 360
LDEAIKFLN MPS GCQPN IT+NIILRSMCST RWMDAEKLL DM+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360
Query: 361 LINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGG 420
LINFLCRKGLLGRAI++LEKMP+HGC PNSLSY PLLHGFCKEK+MDRAIE+L MVS G
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420
Query: 421 CYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI 480
CYPDI+TYNT+L ALCKDGKV+ A EI+NQL SKGCSPVLITYNT+IDGL+K GKT AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480
Query: 481 KFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGL 540
K LDEM+ K L+P ITYSSLVGGLSR GKVDEAI FFH+ E MG+RPNA T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540
Query: 541 CNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS 600
C +QT+RAIDFL +M+ R C P E SY ILIEGLA EG+AKEALEL NELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597
Query: 601 SVEQVIVK 606
S EQV K
Sbjct: 601 SAEQVAGK 597
BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 413.3 bits (1061), Expect = 4.7e-114
Identity = 216/505 (42.77%), Postives = 303/505 (60.00%), Query Frame = 0
Query: 104 HSQSFEGFENNNHLRLL---VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGK 163
HSQS GF + L++ R+G LE M +G PD+ CT LI+
Sbjct: 81 HSQSL-GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN 140
Query: 164 IRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNT 223
I KA RVMEIL + DV YN LI+G+CK I A ++ +RM SPD VTYN
Sbjct: 141 IPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 200
Query: 224 ILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKG 283
++ +LC G+L A+ VL++ L C P VITYTILIEAT E GV +A+KL+DEM ++G
Sbjct: 201 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 260
Query: 284 CKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAE 343
KPD+ TYN +I+G+CKEG +D A + + ++ GC+P+ I+YNI+LR++ + +W + E
Sbjct: 261 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 320
Query: 344 KLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGF 403
KL+ M + C P+VVT++ILI LCR G + A+N+L+ M G TP++ SY PL+ F
Sbjct: 321 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 380
Query: 404 CKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVL 463
C+E R+D AIEFL TM+S GC PDI+ YNT+L LCK+GK D A EI +L GCSP
Sbjct: 381 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 440
Query: 464 ITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD 523
+YNT+ L G A+ + EM G++P ITY+S++ L R G VDEA D
Sbjct: 441 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 500
Query: 524 LEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGL 583
+ P+ TYN ++LG C + AI+ L MV C P E +Y +LIEG+ G
Sbjct: 501 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 560
Query: 584 AKEALELHNELCSRGVVKKSSVEQV 603
EA+EL N+L + + S +++
Sbjct: 561 RAEAMELANDLVRIDAISEYSFKRL 583
BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match:
Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 4.2e-86
Identity = 169/479 (35.28%), Postives = 266/479 (55.53%), Query Frame = 0
Query: 113 NNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILK 172
NN L L NG+L + K +E M ++P +C+ L+R L + ++ KA ++ ++
Sbjct: 107 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166
Query: 173 DSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVS---PDVVTYNTILRTLCGCGRLK 232
S V D TYN++I CK G I +AL L E MS+S PDV+TYNT++R + G +
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 233 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 292
QA+ QLQ+ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VTYN L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 293 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 352
C+ G L+E + H+ S+G + NT+TYN +L S+CS + W + E++L+ M +
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 353 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 412
P+V+T+NILIN G CK + + RAI+F
Sbjct: 347 PTVITYNILIN-----------------------------------GLCKARLLSRAIDF 406
Query: 413 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 472
M+ C PDI+TYNT+L A+ K+G VD A E++ L++ C P LITYN++IDGL+K
Sbjct: 407 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 466
Query: 473 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 532
G + A++ +M G+ P IT SL+ G R V+EA + G +T
Sbjct: 467 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 526
Query: 533 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNEL 589
Y ++ GLC ++ AI+ + M+ C P E Y +++G+ + G+ EA++L +L
Sbjct: 527 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 550
BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 315.8 bits (808), Expect = 1.0e-84
Identity = 172/486 (35.39%), Postives = 279/486 (57.41%), Query Frame = 0
Query: 126 LENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNI 185
L + F LE + G P++ T L+ DLCK +++KA RV+E++ S + D Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 186 LISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSE 245
L++ CK G +G A++L E+M + VTYN ++R LC G L Q++ ++R +Q
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 246 CYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAI 305
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 306 KFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFL 365
+P+ G + N ++YNI+LR +C RW +A LL +M +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 366 CRKGLLGRAINVLEKMPR--HGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 425
G +A+ VL++M + H + SY P++ CKE ++D ++ L+ M+ C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 426 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 485
+ TYN + + KV A I+ L +K Y ++I L + G T A + L
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 486 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEM-GVRPNANTYNSIMLGLCN 545
EM G +P TYS+L+ GL G A+ +EE +P + +N+++LGLC
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 546 IQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSV 605
I++T+ A++ MV + +P E +Y IL+EG+A E + A E+ +EL R V+ +++V
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of CmaCh12G001840 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 303.5 bits (776), Expect = 5.3e-81
Identity = 160/488 (32.79%), Postives = 265/488 (54.30%), Query Frame = 0
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATR-VMEILKDSRAVLD 180
+ G+L+ + E M G + +++ CK G++ A + E+ D
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 181 VRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLD 240
T+N L++G CK+G + A+++ + M PDV TYN+++ LC G +K+A++VLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 241 RQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEG 300
+ + +C P+ +TY LI CKE+ V +A +L + +KG PDV T+N LI+G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 301 RLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFN 360
A++ M S GC+P+ TYN+++ S+CS + +A +L M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 361 ILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSG 420
LI+ C+ A + ++M HG + NS++Y L+ G CK +R++ A + ++ M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 421 GCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDA 480
G PD TYN+LL C+ G + AA+IV + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 481 IKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD-LEEMGVRPNANTYNSIML 540
K L ++ KG+ Y+ ++ GL R K EAI F + LE+ P+A +Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 541 GLCNIQQTNR-AIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVV 600
GLCN R A+DFL ++ + +P +S +L EGL + + ++L N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 601 KKSSVEQV 603
+ V V
Sbjct: 715 SEEEVSMV 722
BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match:
A0A6J1KMH6 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111495955 PE=4 SV=1)
HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD
Sbjct: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP
Sbjct: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
Query: 601 QVIVKNSV 609
QVIVKNSV
Sbjct: 601 QVIVKNSV 608
BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match:
A0A6J1GH96 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111454158 PE=4 SV=1)
HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 591/608 (97.20%), Postives = 601/608 (98.85%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAKNYT+GFCLF RHSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1 MDLTLPAKNYTDGFCLFQRHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61 DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTKRWMDAEKLLGDMVRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
FLCRKGLLGRAI+VLEKMPRHGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPRHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420
Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480
Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
DEMKGKGLEPAIITYSSLVGGLSRGGK+DEAIAFFHDLEEMGVRPNA TYNSIMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKIDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540
Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVE 600
Query: 601 QVIVKNSV 609
QV+VKNSV
Sbjct: 601 QVMVKNSV 608
BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match:
A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)
HSP 1 Score: 1008.4 bits (2606), Expect = 1.2e-290
Identity = 512/621 (82.45%), Postives = 553/621 (89.05%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MD+TLPAK+YT+GFCLF R S + RGR+VRA VTSEANSLRLYVG KGK+RFLV+P
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 D----SEEPISSITKQLNIVRAVSRVDTL----RLQ------HGHLNGANSSSSASNHSQ 120
D E+ I+KQL+IVRA+SRVDT RLQ HGHLNG+NSSSSASNHSQ
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
Query: 121 SFEGFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATR 180
SFE FENNNHLR LVRNGELE GFKF+E+M G+IPDI ACT LIR LCKTGK RKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
Query: 181 VMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCG 240
VMEIL+DS AV DV TYN+LISGYCKSGEIGSAL+L +RMSVSPDVVTYNTILRTLC G
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
Query: 241 RLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYN 300
+LKQAM+VLDRQLQ ECYPDVITYTILIEATCKESGVG+AMKLLDEM+NKGCKPDVVT+N
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
Query: 301 VLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRK 360
VLI GICKEGRLDEAIKFLN+MPSYGCQPN IT+NIILRSMCST RWMDAEKLL +MVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAI+VLEKMP+HGCTPNSLSY PLLHGFCKEK+MDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
Query: 421 IEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDG 480
IE+L+ MVS GCYPDI+TYNTLL ALCKDGKVDVA EI+NQL +KGCSPVLITYNT+IDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPN 540
LSKVGKTEDAIK LDEMKGKGL+P IITYSSLV GLSR GKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540
Query: 541 ANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHN 600
A TYNSIMLGLC ++QT+RAIDFLAYMVAR C PTEASYMILIEGLA EGLAKEALEL N
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
Query: 601 ELCSRGVVKKSSVEQVIVKNS 608
ELCSRGVVKKSS EQV+VKNS
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNS 621
BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match:
A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)
HSP 1 Score: 976.5 bits (2523), Expect = 5.2e-281
Identity = 499/618 (80.74%), Postives = 540/618 (87.38%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAK+YT+GFCLFHRH+ K R R V AK V+SE NSLRL+VG KGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTL----RLQHG------HLNG-ANSSSSASNHSQSFE 120
S+E +VRAV RVDT RL HG HLNG ++SSSS+SN+SQS E
Sbjct: 61 GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120
Query: 121 GFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVME 180
FENNNHLR LVRNGELE GFKFLEDM +RG+IPDI ACT LIR LCKTGK RKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
Query: 181 ILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLK 240
IL+DS AV DV TYN+LISGYCKSGEIGSAL+L +RMSVSPDVVTYNTILRTLC G+LK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 300
QAM+VLDRQLQ ECYPDVITYTILIEATCKESGVG+AMKLLDEMR+KGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 360
GICKEGRLDEAIKFLNHMPSYGCQPN IT+NIILRSMCST RWMDAEKLL +M+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 420
PSVVTFNILINFLCRKGL+GRAI+VLEKMP+HGCTPNSLSY PLLHGFCKEK+MDRAIE+
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
Query: 421 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 480
L+ MVS GCYPDI+TYNTLL ALCKDGKVD+A EI+NQL SKGCSPVLITYNT+IDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 540
VGKT DAIK LDEMKGKGL+P IITYS+LVGGLSR GKVDEAIAFFHDLEEMGVRPNA T
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
Query: 541 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELC 600
YNSIMLGLC +QT RAIDFLAYMVAR C PTEASYMILIEGLA EGL KEALEL +EL
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600
Query: 601 SRGVVKKSSVEQVIVKNS 608
SRGVV+KSS EQV+VKN+
Sbjct: 601 SRGVVRKSSAEQVVVKNT 609
BLAST of CmaCh12G001840 vs. ExPASy TrEMBL
Match:
A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)
HSP 1 Score: 976.5 bits (2523), Expect = 5.2e-281
Identity = 499/618 (80.74%), Postives = 540/618 (87.38%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAK+YT+GFCLFHRH+ K R R V AK V+SE NSLRL+VG KGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTL----RLQHG------HLNG-ANSSSSASNHSQSFE 120
S+E +VRAV RVDT RL HG HLNG ++SSSS+SN+SQS E
Sbjct: 61 GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120
Query: 121 GFENNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVME 180
FENNNHLR LVRNGELE GFKFLEDM +RG+IPDI ACT LIR LCKTGK RKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
Query: 181 ILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLK 240
IL+DS AV DV TYN+LISGYCKSGEIGSAL+L +RMSVSPDVVTYNTILRTLC G+LK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 300
QAM+VLDRQLQ ECYPDVITYTILIEATCKESGVG+AMKLLDEMR+KGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 360
GICKEGRLDEAIKFLNHMPSYGCQPN IT+NIILRSMCST RWMDAEKLL +M+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 420
PSVVTFNILINFLCRKGL+GRAI+VLEKMP+HGCTPNSLSY PLLHGFCKEK+MDRAIE+
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
Query: 421 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 480
L+ MVS GCYPDI+TYNTLL ALCKDGKVD+A EI+NQL SKGCSPVLITYNT+IDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 540
VGKT DAIK LDEMKGKGL+P IITYS+LVGGLSR GKVDEAIAFFHDLEEMGVRPNA T
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
Query: 541 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELC 600
YNSIMLGLC +QT RAIDFLAYMVAR C PTEASYMILIEGLA EGL KEALEL +EL
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600
Query: 601 SRGVVKKSSVEQVIVKNS 608
SRGVV+KSS EQV+VKN+
Sbjct: 601 SRGVVRKSSAEQVVVKNT 609
BLAST of CmaCh12G001840 vs. NCBI nr
Match:
XP_023001920.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima])
HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD
Sbjct: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP
Sbjct: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
Query: 601 QVIVKNSV 609
QVIVKNSV
Sbjct: 601 QVIVKNSV 608
BLAST of CmaCh12G001840 vs. NCBI nr
Match:
XP_022951268.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])
HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 591/608 (97.20%), Postives = 601/608 (98.85%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAKNYT+GFCLF RHSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1 MDLTLPAKNYTDGFCLFQRHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61 DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTKRWMDAEKLLGDMVRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
FLCRKGLLGRAI+VLEKMPRHGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPRHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420
Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480
Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
DEMKGKGLEPAIITYSSLVGGLSRGGK+DEAIAFFHDLEEMGVRPNA TYNSIMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKIDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540
Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VE
Sbjct: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVE 600
Query: 601 QVIVKNSV 609
QV+VKNSV
Sbjct: 601 QVMVKNSV 608
BLAST of CmaCh12G001840 vs. NCBI nr
Match:
XP_023538361.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 587/608 (96.55%), Postives = 599/608 (98.52%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAKNYT+GFCLF RHSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1 MDLTLPAKNYTDGFCLFRRHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL
Sbjct: 61 DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
VRNGELENGFKFLE+MFFR EIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLENMFFRDEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTERWMDAEKLLADMVRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
FLCRKGLLGRAI+VLEKMPRHGC PNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPRHGCIPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420
Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480
Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
DEMKGKGLEPAIITYSSLVGGLSRGGK+DEAIAFFHDLEEMGVRPNA TYN+IMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKIDEAIAFFHDLEEMGVRPNAITYNAIMLGLCKV 540
Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
+QTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE
Sbjct: 541 RQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
Query: 601 QVIVKNSV 609
QV+VKNSV
Sbjct: 601 QVMVKNSV 608
BLAST of CmaCh12G001840 vs. NCBI nr
Match:
KAG7020236.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 579/601 (96.34%), Postives = 591/601 (98.34%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCLFHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSD 60
MDLTLPAKNYT+GFCLF HSAKIRGREVRAKQLVTSEANSLRL+VGAKGKSRFLVIPSD
Sbjct: 1 MDLTLPAKNYTDGFCLFQCHSAKIRGREVRAKQLVTSEANSLRLHVGAKGKSRFLVIPSD 60
Query: 61 DSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLL 120
DSEEPISSITK LNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQS GFENNNHLRLL
Sbjct: 61 DSEEPISSITKHLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSSNGFENNNHLRLL 120
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV
Sbjct: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDV 180
Query: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ
Sbjct: 181 RTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQ 240
Query: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE
Sbjct: 241 SECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDE 300
Query: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILIN 360
AIKFLNHMPSYGCQPNTITYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILIN
Sbjct: 301 AIKFLNHMPSYGCQPNTITYNIILRSMCSTERWMDAEKLLADMVRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 420
FLCRKGLLGRAI+VLEKMP+HGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYP
Sbjct: 361 FLCRKGLLGRAIDVLEKMPQHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYP 420
Query: 421 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 480
DIM+YNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FL
Sbjct: 421 DIMSYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFL 480
Query: 481 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNI 540
DEMKGKGLEPAIITY+SLVGGLSRGGKVDEAIAFFHDLEEMGVRPNA TYNSIMLGLC +
Sbjct: 481 DEMKGKGLEPAIITYASLVGGLSRGGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540
Query: 541 QQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVE 600
+QTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VE
Sbjct: 541 RQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVE 600
Query: 601 Q 602
Q
Sbjct: 601 Q 601
BLAST of CmaCh12G001840 vs. NCBI nr
Match:
KAG6585323.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 566/590 (95.93%), Postives = 578/590 (97.97%), Query Frame = 0
Query: 19 RHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVIPSDDSEEPISSITKQLNIVRA 78
R AKIRGREVRAKQL TSEANSLRL+VGAKGKSRFLVIPSDDSEEPISSITK LNIVRA
Sbjct: 36 RSPAKIRGREVRAKQLFTSEANSLRLHVGAKGKSRFLVIPSDDSEEPISSITKHLNIVRA 95
Query: 79 VSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHLRLLVRNGELENGFKFLEDMFF 138
VSRVDTLRLQHGHLNGANSSSSASNHSQS GFENNNHLRLLVRNGELENGFKFLEDMFF
Sbjct: 96 VSRVDTLRLQHGHLNGANSSSSASNHSQSSNGFENNNHLRLLVRNGELENGFKFLEDMFF 155
Query: 139 RGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGS 198
RGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGS
Sbjct: 156 RGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGS 215
Query: 199 ALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATC 258
ALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATC
Sbjct: 216 ALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATC 275
Query: 259 KESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTI 318
KESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTI
Sbjct: 276 KESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTI 335
Query: 319 TYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKM 378
TYNIILRSMCST+RWMDAEKLL DMVRKGCSPSVVTFNILINFLCRKGLLGRAI+VLEKM
Sbjct: 336 TYNIILRSMCSTERWMDAEKLLADMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 395
Query: 379 PRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKV 438
P+HGCTPNSLSYKPLLHGFCKEK+MDRAIEFLN MVS GCYPDIM+YNTLLIALCKDGKV
Sbjct: 396 PQHGCTPNSLSYKPLLHGFCKEKKMDRAIEFLNIMVSRGCYPDIMSYNTLLIALCKDGKV 455
Query: 439 DVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSL 498
DVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI+FLDEMKGKGLEPAIITY+SL
Sbjct: 456 DVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIRFLDEMKGKGLEPAIITYASL 515
Query: 499 VGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDC 558
VGGLSRGGKVDEAIAFFHDLEEMGVRPNA TYNSIMLGLC ++QTNRAIDFLAYMVARDC
Sbjct: 516 VGGLSRGGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTNRAIDFLAYMVARDC 575
Query: 559 IPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSVEQVIVKNSV 609
IPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS+VEQV+VK SV
Sbjct: 576 IPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSTVEQVMVKTSV 625
BLAST of CmaCh12G001840 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 791.2 bits (2042), Expect = 5.9e-229
Identity = 399/608 (65.62%), Postives = 477/608 (78.45%), Query Frame = 0
Query: 1 MDLTLPAKNYTEGFCL---FHRHSAKIRGREVRAKQLVTSEANSLRLYVGAKGKSRFLVI 60
MDL + + EGFCL FHR + +V + TS + S ++ +G++ ++R +++
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR---TSGSISSKIPLGSRKRNRLVLV 60
Query: 61 PSDDSEEPISSITKQLNIVRAVSRVDTLRLQHGHLNGANSSSSASNHSQSFEGFENNNHL 120
+ +S + + + +TL + + NG N S+ N S + E E+NNHL
Sbjct: 61 SA-------ASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFALEDVESNNHL 120
Query: 121 RLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAV 180
R +VR GELE GFKFLE+M + G +PDI CT LIR C+ GK RKA +++EIL+ S AV
Sbjct: 121 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 180
Query: 181 LDVRTYNILISGYCKSGEIGSALKLFERMSVSPDVVTYNTILRTLCGCGRLKQAMDVLDR 240
DV TYN++ISGYCK+GEI +AL + +RMSVSPDVVTYNTILR+LC G+LKQAM+VLDR
Sbjct: 181 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 240
Query: 241 QLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGR 300
LQ +CYPDVITYTILIEATC++SGVG AMKLLDEMR++GC PDVVTYNVL+ GICKEGR
Sbjct: 241 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 300
Query: 301 LDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNI 360
LDEAIKFLN MPS GCQPN IT+NIILRSMCST RWMDAEKLL DM+RKG SPSVVTFNI
Sbjct: 301 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 360
Query: 361 LINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGG 420
LINFLCRKGLLGRAI++LEKMP+HGC PNSLSY PLLHGFCKEK+MDRAIE+L MVS G
Sbjct: 361 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 420
Query: 421 CYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAI 480
CYPDI+TYNT+L ALCKDGKV+ A EI+NQL SKGCSPVLITYNT+IDGL+K GKT AI
Sbjct: 421 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 480
Query: 481 KFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANTYNSIMLGL 540
K LDEM+ K L+P ITYSSLVGGLSR GKVDEAI FFH+ E MG+RPNA T+NSIMLGL
Sbjct: 481 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 540
Query: 541 CNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKS 600
C +QT+RAIDFL +M+ R C P E SY ILIEGLA EG+AKEALEL NELC++G++KKS
Sbjct: 541 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 597
Query: 601 SVEQVIVK 606
S EQV K
Sbjct: 601 SAEQVAGK 597
BLAST of CmaCh12G001840 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 413.3 bits (1061), Expect = 3.4e-115
Identity = 216/505 (42.77%), Postives = 303/505 (60.00%), Query Frame = 0
Query: 104 HSQSFEGFENNNHLRLL---VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGK 163
HSQS GF + L++ R+G LE M +G PD+ CT LI+
Sbjct: 81 HSQSL-GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN 140
Query: 164 IRKATRVMEILKDSRAVLDVRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNT 223
I KA RVMEIL + DV YN LI+G+CK I A ++ +RM SPD VTYN
Sbjct: 141 IPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 200
Query: 224 ILRTLCGCGRLKQAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKG 283
++ +LC G+L A+ VL++ L C P VITYTILIEAT E GV +A+KL+DEM ++G
Sbjct: 201 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 260
Query: 284 CKPDVVTYNVLIKGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAE 343
KPD+ TYN +I+G+CKEG +D A + + ++ GC+P+ I+YNI+LR++ + +W + E
Sbjct: 261 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 320
Query: 344 KLLDDMVRKGCSPSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGF 403
KL+ M + C P+VVT++ILI LCR G + A+N+L+ M G TP++ SY PL+ F
Sbjct: 321 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 380
Query: 404 CKEKRMDRAIEFLNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVL 463
C+E R+D AIEFL TM+S GC PDI+ YNT+L LCK+GK D A EI +L GCSP
Sbjct: 381 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 440
Query: 464 ITYNTIIDGLSKVGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD 523
+YNT+ L G A+ + EM G++P ITY+S++ L R G VDEA D
Sbjct: 441 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 500
Query: 524 LEEMGVRPNANTYNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGL 583
+ P+ TYN ++LG C + AI+ L MV C P E +Y +LIEG+ G
Sbjct: 501 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 560
Query: 584 AKEALELHNELCSRGVVKKSSVEQV 603
EA+EL N+L + + S +++
Sbjct: 561 RAEAMELANDLVRIDAISEYSFKRL 583
BLAST of CmaCh12G001840 vs. TAIR 10
Match:
AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 320.5 bits (820), Expect = 3.0e-87
Identity = 169/479 (35.28%), Postives = 266/479 (55.53%), Query Frame = 0
Query: 113 NNNHLRLLVRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILK 172
NN L L NG+L + K +E M ++P +C+ L+R L + ++ KA ++ ++
Sbjct: 107 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166
Query: 173 DSRAVLDVRTYNILISGYCKSGEIGSALKLFERMSVS---PDVVTYNTILRTLCGCGRLK 232
S V D TYN++I CK G I +AL L E MS+S PDV+TYNT++R + G +
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 233 QAMDVLDRQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLI 292
QA+ QLQ+ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VTYN L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 293 KGICKEGRLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCS 352
C+ G L+E + H+ S+G + NT+TYN +L S+CS + W + E++L+ M +
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 353 PSVVTFNILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEF 412
P+V+T+NILIN G CK + + RAI+F
Sbjct: 347 PTVITYNILIN-----------------------------------GLCKARLLSRAIDF 406
Query: 413 LNTMVSGGCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSK 472
M+ C PDI+TYNT+L A+ K+G VD A E++ L++ C P LITYN++IDGL+K
Sbjct: 407 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 466
Query: 473 VGKTEDAIKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEMGVRPNANT 532
G + A++ +M G+ P IT SL+ G R V+EA + G +T
Sbjct: 467 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 526
Query: 533 YNSIMLGLCNIQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNEL 589
Y ++ GLC ++ AI+ + M+ C P E Y +++G+ + G+ EA++L +L
Sbjct: 527 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 550
BLAST of CmaCh12G001840 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 315.8 bits (808), Expect = 7.3e-86
Identity = 172/486 (35.39%), Postives = 279/486 (57.41%), Query Frame = 0
Query: 126 LENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATRVMEILKDSRAVLDVRTYNI 185
L + F LE + G P++ T L+ DLCK +++KA RV+E++ S + D Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 186 LISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLDRQLQSE 245
L++ CK G +G A++L E+M + VTYN ++R LC G L Q++ ++R +Q
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 246 CYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEGRLDEAI 305
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 306 KFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFNILINFL 365
+P+ G + N ++YNI+LR +C RW +A LL +M +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 366 CRKGLLGRAINVLEKMPR--HGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSGGCYP 425
G +A+ VL++M + H + SY P++ CKE ++D ++ L+ M+ C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 426 DIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDAIKFL 485
+ TYN + + KV A I+ L +K Y ++I L + G T A + L
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 486 DEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHDLEEM-GVRPNANTYNSIMLGLCN 545
EM G +P TYS+L+ GL G A+ +EE +P + +N+++LGLC
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 546 IQQTNRAIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVVKKSSV 605
I++T+ A++ MV + +P E +Y IL+EG+A E + A E+ +EL R V+ +++V
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of CmaCh12G001840 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 303.5 bits (776), Expect = 3.8e-82
Identity = 160/488 (32.79%), Postives = 265/488 (54.30%), Query Frame = 0
Query: 121 VRNGELENGFKFLEDMFFRGEIPDINACTILIRDLCKTGKIRKATR-VMEILKDSRAVLD 180
+ G+L+ + E M G + +++ CK G++ A + E+ D
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 181 VRTYNILISGYCKSGEIGSALKLFERM---SVSPDVVTYNTILRTLCGCGRLKQAMDVLD 240
T+N L++G CK+G + A+++ + M PDV TYN+++ LC G +K+A++VLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 241 RQLQSECYPDVITYTILIEATCKESGVGKAMKLLDEMRNKGCKPDVVTYNVLIKGICKEG 300
+ + +C P+ +TY LI CKE+ V +A +L + +KG PDV T+N LI+G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 301 RLDEAIKFLNHMPSYGCQPNTITYNIILRSMCSTQRWMDAEKLLDDMVRKGCSPSVVTFN 360
A++ M S GC+P+ TYN+++ S+CS + +A +L M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 361 ILINFLCRKGLLGRAINVLEKMPRHGCTPNSLSYKPLLHGFCKEKRMDRAIEFLNTMVSG 420
LI+ C+ A + ++M HG + NS++Y L+ G CK +R++ A + ++ M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 421 GCYPDIMTYNTLLIALCKDGKVDVAAEIVNQLRSKGCSPVLITYNTIIDGLSKVGKTEDA 480
G PD TYN+LL C+ G + AA+IV + S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 481 IKFLDEMKGKGLEPAIITYSSLVGGLSRGGKVDEAIAFFHD-LEEMGVRPNANTYNSIML 540
K L ++ KG+ Y+ ++ GL R K EAI F + LE+ P+A +Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 541 GLCNIQQTNR-AIDFLAYMVARDCIPTEASYMILIEGLADEGLAKEALELHNELCSRGVV 600
GLCN R A+DFL ++ + +P +S +L EGL + + ++L N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 601 KKSSVEQV 603
+ V V
Sbjct: 715 SEEEVSMV 722
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q3EDF8 | 8.4e-228 | 65.63 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 4.7e-114 | 42.77 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q9FRS4 | 4.2e-86 | 35.28 | Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... | [more] |
A3KPF8 | 1.0e-84 | 35.39 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q9LFF1 | 5.3e-81 | 32.79 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KMH6 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... | [more] |
A0A6J1GH96 | 0.0e+00 | 97.20 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1BSC2 | 1.2e-290 | 82.45 | pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... | [more] |
A0A5A7VFH1 | 5.2e-281 | 80.74 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BB35 | 5.2e-281 | 80.74 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_023001920.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima] | [more] |
XP_022951268.1 | 0.0e+00 | 97.20 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata] | [more] |
XP_023538361.1 | 0.0e+00 | 96.55 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... | [more] |
KAG7020236.1 | 0.0e+00 | 96.34 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6585323.1 | 0.0e+00 | 95.93 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09900.1 | 5.9e-229 | 65.63 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 3.4e-115 | 42.77 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G08610.1 | 3.0e-87 | 35.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G79080.1 | 7.3e-86 | 35.39 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 3.8e-82 | 32.79 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |