CmaCh12G001660 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G001660
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein S6
LocationCma_Chr12: 738291 .. 740530 (-)
RNA-Seq ExpressionCmaCh12G001660
SyntenyCmaCh12G001660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAACCCTAAAGAAGGCGCATCTCCCTCGCTCCATTGTTCATATCTTCTCTGCTGCCGCCTGCCTTCACGACTATCTCAACAAGATGAAGGTTCGACCTTCGATTCCTCTTCTTCCTGATTGTTCTCTCTAATTTTATTCAATTCTAACTTTGATCTCTTTTGTTTTCAGTTTAATATCGCGAATCCGACCACTGGATGCCAGAAGAAACTCGAAATCGATGATGACCAGAAACTGTTAGCTTTCAAATCTCTATGTTCTTCAGTTTTTTGTTTTAGTAACGAATGTGCATTCTATGTTTATGAATTGTTCTTTCCATCTTCAGTCGAAATTTTTCTATTGCAAACTTTACATTAATACGTAGGTTGGTCTAGTAGAACCGTAATGTTCAGTTGCTTGAAACTTAGATTAGCTTGAAAAGTACATCTTCATGTCTTGAAACTTATATTTGCTGTAGCATGGCTTCACATGCCTGGATCTTTGAATTTATTACTAAACCTTTAGTGTTTGCATGGATGATATCATATTTAACCTGGGTTAAATTTCTTCATGGACTAAAATGAACCATTTTCTTTGTTTAGCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAAGTCAGTGGAGACTCACTTGGAGAGGTATGTGGGCTCTTCTGTGATCCATTATATTAAATCTCAGTTCCTCGTTGCTGTGGCTGAGTTTACTGATTGAGGAATTTCCTCTTCTCAGGAATTCAAGGGCTATGTTTTCAAAATCATGGGAGGTTGCGACAAGCAGGGATTCCCAATGAAACAGGGAGTGTTGACCCCTGGCCGTGTCCGTCTCCTTCTACACAGAGGTCTGTGGCACCGTTTAATCTAATTTGTGGTGTATATTATTTGTTTCCAATGATTTATAGTACTATCCCAAGTATCCAAGCATGTATTTATTTGTTTTTGTTTGGCCAGGTACCCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAACGCAGGAGGAAGTCTGTGCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTTCTGAATTTGGTGATTGTGAAGAAGGGAGACAATGATCTTCCTGGCTTGACAGACACCGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAGCTTTTCAATCTGTCAAAGGAAGACGATGTTCGAAAGTATGTCAACACATACCGTAGAACATTTACCACCAAATCTGGTATGGTTTATATTGCCTTTTGTGAGTTTTGAACCTATCTTAACAAACTAAGATCGTTTTGGATTTCTTTTCCTGGATGGAGAGGTTTAGAGAAATGTATTTCTTTAATAAACTATGCTATATTTTGTCACAACCTTTCTAAATTTGTTGAAGTTGTATTATATGGCATCTGTCTACATCACATACCCAAGTGGGCTTGTGAGATCCCACATCTGTTGGAATGAAGCATTCCTTTTAAGGGGTGGAAATCTCTCCTTAGTAGACTCGTTTTGAAACTACGAGGCTGACTGCAGTACGAAACGGTCCAAAACGGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTGTAGGAATACTCTTAGTTTATCTTATCTAGATTAATCCACTTTCTCGTTTGAGCGATGTCAAGAATTTTATTTGGTACAAATTGTACATTCAGTTTCATTTCTTCTTGTATTAAGTTCTTATGGGGCTTTTTCTGTGTTGATTGGCAGGCAAAAAAGTTAGCAAGGCCCCTAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCAGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTTGCGTCTAGGCTGAAGGAGCAAAGAGAACGCCGCAGCGAGAGTTTGGCAAAGAAGAGGTCGAGGCTCTCTACTGCTTCAAAGCCGTCCATTGCTGCTTAGTTAATTCGTATTATTTATGTCTCAGCGTTCTGTTGTCTTAAATTTTGCCATCCTGCTTTGCTTTTTAAAAGAATCTTCTTTTGGCTTTCTTGACATCTAGAATGGTTTGGATATTTGGTTCCTAATTTGGATAGCCATTTCTTGATATACTTCAAATTTCATGATTAAGCCTAGAGGAATTTTGAAATCCAGCTTAGTAATTCGACGAATTCACGCAGTTCATCAATTTTAGTGGATGTTCAAGTACATGGTTAATCTGAAAAGACTGCTTTATATTTAATGATAT

mRNA sequence

ATTAAACCCTAAAGAAGGCGCATCTCCCTCGCTCCATTGTTCATATCTTCTCTGCTGCCGCCTGCCTTCACGACTATCTCAACAAGATGAAGTTTAATATCGCGAATCCGACCACTGGATGCCAGAAGAAACTCGAAATCGATGATGACCAGAAACTTCGAAATTTTTCTATTGCAAACTTTACATTAATACGTAGCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAAGTCAGTGGAGACTCACTTGGAGAGGAATTCAAGGGCTATGTTTTCAAAATCATGGGAGGTTGCGACAAGCAGGGATTCCCAATGAAACAGGGAGTGTTGACCCCTGGCCGTGTCCGTCTCCTTCTACACAGAGGTACCCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAACGCAGGAGGAAGTCTGTGCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTTCTGAATTTGGTGATTGTGAAGAAGGGAGACAATGATCTTCCTGGCTTGACAGACACCGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAGCTTTTCAATCTGTCAAAGGAAGACGATGTTCGAAAGTATGTCAACACATACCGTAGAACATTTACCACCAAATCTGGTATGGTTTATATTGCCTTTTGCAAAAAAGTTAGCAAGGCCCCTAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCAGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTTGCGTCTAGGCTGAAGGAGCAAAGAGAACGCCGCAGCGAGAGTTTGGCAAAGAAGAGGTCGAGGCTCTCTACTGCTTCAAAGCCGTCCATTGCTGCTTAGTTAATTCGTATTATTTATGTCTCAGCGTTCTGTTGTCTTAAATTTTGCCATCCTGCTTTGCTTTTTAAAAGAATCTTCTTTTGGCTTTCTTGACATCTAGAATGGTTTGGATATTTGGTTCCTAATTTGGATAGCCATTTCTTGATATACTTCAAATTTCATGATTAAGCCTAGAGGAATTTTGAAATCCAGCTTAGTAATTCGACGAATTCACGCAGTTCATCAATTTTAGTGGATGTTCAAGTACATGGTTAATCTGAAAAGACTGCTTTATATTTAATGATAT

Coding sequence (CDS)

ATGAAGTTTAATATCGCGAATCCGACCACTGGATGCCAGAAGAAACTCGAAATCGATGATGACCAGAAACTTCGAAATTTTTCTATTGCAAACTTTACATTAATACGTAGCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAAGTCAGTGGAGACTCACTTGGAGAGGAATTCAAGGGCTATGTTTTCAAAATCATGGGAGGTTGCGACAAGCAGGGATTCCCAATGAAACAGGGAGTGTTGACCCCTGGCCGTGTCCGTCTCCTTCTACACAGAGGTACCCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAACGCAGGAGGAAGTCTGTGCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTTCTGAATTTGGTGATTGTGAAGAAGGGAGACAATGATCTTCCTGGCTTGACAGACACCGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAGCTTTTCAATCTGTCAAAGGAAGACGATGTTCGAAAGTATGTCAACACATACCGTAGAACATTTACCACCAAATCTGGTATGGTTTATATTGCCTTTTGCAAAAAAGTTAGCAAGGCCCCTAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCAGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTTGCGTCTAGGCTGAAGGAGCAAAGAGAACGCCGCAGCGAGAGTTTGGCAAAGAAGAGGTCGAGGCTCTCTACTGCTTCAAAGCCGTCCATTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSTASKPSIAA
Homology
[Close]
BLAST of CmaCh12G001660 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.8e-119
Identity = 229/263 (87.07%), Postives = 235/263 (89.35%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAF+DKRISQEVSGD+LGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFYDKRISQEVSGDALGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS D
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG+NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT
Sbjct: 121 LSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
            K G       K  SKAPKIQRLVTPLTLQRKR RIAEKKKR+AKAKSEAAEYQKLLASR
Sbjct: 181 NKKG-------KTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTAS 264
           LKEQR+RRSESLAKKRSRLS A+
Sbjct: 241 LKEQRDRRSESLAKKRSRLSAAA 243

[Close]
BLAST of CmaCh12G001660 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 422.5 bits (1085), Expect = 3.5e-117
Identity = 226/269 (84.01%), Postives = 237/269 (88.10%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFN+ANPTTGCQKKLEIDDDQKL             RAFFDKR+SQEVSGD+LGEEFKG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL-------------RAFFDKRLSQEVSGDALGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS D
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT
Sbjct: 121 LSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
            K G       KKVSKAPKIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASR
Sbjct: 181 NKKG-------KKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQR+RRSESLAKKRSRLS+A    +AA
Sbjct: 241 LKEQRDRRSESLAKKRSRLSSAPAKPVAA 249

[Close]
BLAST of CmaCh12G001660 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 418.3 bits (1074), Expect = 6.5e-116
Identity = 224/270 (82.96%), Postives = 238/270 (88.15%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFN+ANPTTGCQKKLEIDDDQKL             RAF+DKRISQEVSGD+LGEEFKG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL-------------RAFYDKRISQEVSGDALGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS D
Sbjct: 61  YVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT
Sbjct: 121 LSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
            K G       K+VSKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASR
Sbjct: 181 NKKG-------KEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLST-ASKPSIAA 270
           LKEQR+RRSESLAKKRSRLS+ A+KPS+ A
Sbjct: 241 LKEQRDRRSESLAKKRSRLSSAAAKPSVTA 250

[Close]
BLAST of CmaCh12G001660 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 6.0e-85
Identity = 177/211 (83.89%), Postives = 184/211 (87.20%), Query Frame = 0 

Query: 59  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 118
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 119 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRT 178
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 179 FTTKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLA 238
           FTTK          K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLA
Sbjct: 121 FTTK---------WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLA 180

Query: 239 SRLKEQRERRSESLAKKRSRLSTASKPSIAA 270
           SRLKEQRE+RSESLAKKRSRLS ASKPSIAA
Sbjct: 181 SRLKEQREKRSESLAKKRSRLSAASKPSIAA 199

[Close]
BLAST of CmaCh12G001660 vs. ExPASy Swiss-Prot
Match: Q5E995 (40S ribosomal protein S6 OS=Bos taurus OX=9913 GN=RPS6 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.1e-73
Identity = 161/261 (61.69%), Postives = 190/261 (72.80%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MK NI+ P TGCQK +E+DD++KL             R F++KR++ EV+ D+LGEE+KG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKL-------------RTFYEKRMATEVAADALGEEWKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YV +I GG DKQGFPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV  +
Sbjct: 61  YVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDAN 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG+ D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV    R   
Sbjct: 121 LSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPL 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
            K G       K  +KAPKIQRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R
Sbjct: 181 NKDGK------KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKR 236

Query: 241 LKEQRERRSESLAKKRSRLST 262
           +KE +E+R E +AK+R RLS+
Sbjct: 241 MKEAKEKRQEQIAKRR-RLSS 236

[Close]
BLAST of CmaCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1KKB1 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111496500 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.9e-126
Identity = 249/269 (92.57%), Postives = 249/269 (92.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLSTASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1GI12 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111454373 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.9e-126
Identity = 249/269 (92.57%), Postives = 249/269 (92.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLSTASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1KAX8 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111492209 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 247/269 (91.82%), Postives = 249/269 (92.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TK+G       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKAG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLSTASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.1e-125
Identity = 247/269 (91.82%), Postives = 248/269 (92.19%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLS ASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSAASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. ExPASy TrEMBL
Match: A0A6J1G9P2 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.1e-125
Identity = 247/269 (91.82%), Postives = 248/269 (92.19%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLS ASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSAASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. NCBI nr
Match: XP_022951611.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal protein S6-like [Cucurbita maxima] >XP_023538404.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG7020222.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461.8 bits (1187), Expect = 3.9e-126
Identity = 249/269 (92.57%), Postives = 249/269 (92.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLSTASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. NCBI nr
Match: KAG6585304.1 (40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461.8 bits (1187), Expect = 3.9e-126
Identity = 249/269 (92.57%), Postives = 249/269 (92.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 93  MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 152

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 153 YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 212

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT
Sbjct: 213 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 272

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 273 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 332

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLSTASKPSIAA
Sbjct: 333 LKEQRERRSESLAKKRSRLSTASKPSIAA 341

[Close]
BLAST of CmaCh12G001660 vs. NCBI nr
Match: XP_022997249.1 (40S ribosomal protein S6-like [Cucurbita maxima])

HSP 1 Score: 459.1 bits (1180), Expect = 2.5e-125
Identity = 247/269 (91.82%), Postives = 249/269 (92.57%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TK+G       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKAG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLSTASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.4 bits (1178), Expect = 4.3e-125
Identity = 247/269 (91.82%), Postives = 248/269 (92.19%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLS ASKPSIAA
Sbjct: 241 LKEQRERRSESLAKKRSRLSAASKPSIAA 249

[Close]
BLAST of CmaCh12G001660 vs. NCBI nr
Match: KAA0065138.1 (40S ribosomal protein S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 458.0 bits (1177), Expect = 5.7e-125
Identity = 246/269 (91.45%), Postives = 248/269 (92.19%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFNIANPTTGCQKKLEIDDDQKL             RAFFDKRISQEVSGDSLGEEFKG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL-------------RAFFDKRISQEVSGDSLGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT
Sbjct: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
           TKSG       KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
Sbjct: 181 TKSG-------KKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQRERRSESLAKKRSRLS ASKPS+AA
Sbjct: 241 LKEQRERRSESLAKKRSRLSAASKPSVAA 249

[Close]
BLAST of CmaCh12G001660 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 422.5 bits (1085), Expect = 2.5e-118
Identity = 226/269 (84.01%), Postives = 237/269 (88.10%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFN+ANPTTGCQKKLEIDDDQKL             RAFFDKR+SQEVSGD+LGEEFKG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL-------------RAFFDKRLSQEVSGDALGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS D
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT
Sbjct: 121 LSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
            K G       KKVSKAPKIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASR
Sbjct: 181 NKKG-------KKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQR+RRSESLAKKRSRLS+A    +AA
Sbjct: 241 LKEQRDRRSESLAKKRSRLSSAPAKPVAA 249

[Close]
BLAST of CmaCh12G001660 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 418.3 bits (1074), Expect = 4.6e-117
Identity = 224/270 (82.96%), Postives = 238/270 (88.15%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFN+ANPTTGCQKKLEIDDDQKL             RAF+DKRISQEVSGD+LGEEFKG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL-------------RAFYDKRISQEVSGDALGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS D
Sbjct: 61  YVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT
Sbjct: 121 LSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFT 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
            K G       K+VSKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASR
Sbjct: 181 NKKG-------KEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASR 240

Query: 241 LKEQRERRSESLAKKRSRLST-ASKPSIAA 270
           LKEQR+RRSESLAKKRSRLS+ A+KPS+ A
Sbjct: 241 LKEQRDRRSESLAKKRSRLSSAAAKPSVTA 250

[Close]
BLAST of CmaCh12G001660 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 310.1 bits (793), Expect = 1.8e-84
Identity = 179/269 (66.54%), Postives = 189/269 (70.26%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRNFSIANFTLIRSRAFFDKRISQEVSGDSLGEEFKG 60
           MKFN+ANPTTGCQKKLEIDDDQKL             RAFFDKR+SQEVSGD+LGEEFKG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL-------------RAFFDKRLSQEVSGDALGEEFKG 60

Query: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQD 120
           YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS D
Sbjct: 61  YVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPD 120

Query: 121 LSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT 180
           LSVLNLVIVKKG                                                
Sbjct: 121 LSVLNLVIVKKG------------------------------------------------ 180

Query: 181 TKSGMVYIAFCKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR 240
                      KKVSKAPKIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASR
Sbjct: 181 -----------KKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASR 197

Query: 241 LKEQRERRSESLAKKRSRLSTASKPSIAA 270
           LKEQR+RRSESLAKKRSRLS+A    +AA
Sbjct: 241 LKEQRDRRSESLAKKRSRLSSAPAKPVAA 197

[Close]
BLAST of CmaCh12G001660 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 303.1 bits (775), Expect = 2.2e-82
Identity = 166/195 (85.13%), Postives = 177/195 (90.77%), Query Frame = 0 

Query: 76  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDND 135
           MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+ND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 136 LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGMVYIAFCKKVS 195
           LPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K G       K+VS
Sbjct: 61  LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKG-------KEVS 120

Query: 196 KAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKK 255
           KAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKK
Sbjct: 121 KAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKK 180

Query: 256 RSRLST-ASKPSIAA 270
           RSRLS+ A+KPS+ A
Sbjct: 181 RSRLSSAAAKPSVTA 188

The following BLAST results are available for this feature:
BLAST of CmaCh12G001660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3V82.8e-11987.0740S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1[more]
P514303.5e-11784.0140S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3[more]
O485496.5e-11682.9640S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2[more]
P293456.0e-8583.8940S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV... [more]
Q5E9953.1e-7361.6940S ribosomal protein S6 OS=Bos taurus OX=9913 GN=RPS6 PE=2 SV=1[more]
BLAST of CmaCh12G001660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KKB11.9e-12692.5740S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111496500 PE=3 SV=1[more]
A0A6J1GI121.9e-12692.5740S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111454373 PE=3 SV=1[more]
A0A6J1KAX81.2e-12591.8240S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111492209 PE=3 SV=1[more]
A0A6J1ICI32.1e-12591.8240S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1[more]
A0A6J1G9P22.1e-12591.8240S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1[more]
BLAST of CmaCh12G001660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951611.13.9e-12692.5740S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal... [more]
KAG6585304.13.9e-12692.5740S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022997249.12.5e-12591.8240S ribosomal protein S6-like [Cucurbita maxima][more]
XP_022948606.14.3e-12591.8240S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot... [more]
KAA0065138.15.7e-12591.4540S ribosomal protein S6-like [Cucumis melo var. makuwa][more]
BLAST of CmaCh12G001660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10360.12.5e-11884.01Ribosomal protein S6e [more]
AT4G31700.14.6e-11782.96ribosomal protein S6 [more]
AT5G10360.21.8e-8466.54Ribosomal protein S6e [more]
AT4G31700.22.2e-8285.13ribosomal protein S6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 209..236
NoneNo IPR availableGENE3D1.20.5.2650coord: 146..254
e-value: 1.1E-36
score: 127.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..269
NoneNo IPR availablePANTHERPTHR11502:SF2240S RIBOSOMAL PROTEIN S6-LIKEcoord: 1..269
IPR001377Ribosomal protein S6eSMARTSM01405Ribosomal_S6e_2coord: 1..141
e-value: 1.5E-74
score: 263.7
IPR001377Ribosomal protein S6ePFAMPF01092Ribosomal_S6ecoord: 1..141
e-value: 2.6E-50
score: 169.6
IPR001377Ribosomal protein S6ePANTHERPTHR1150240S RIBOSOMAL PROTEIN S6coord: 1..269
IPR014401Ribosomal protein S6, eukaryoticPIRSFPIRSF002129RPS6ecoord: 1..269
e-value: 7.7E-111
score: 367.2
IPR018282Ribosomal protein S6e, conserved sitePROSITEPS00578RIBOSOMAL_S6Ecoord: 65..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G001660.1CmaCh12G001660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome