CmaCh12G001080 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G001080
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTranscription factor CAULIFLOWER
LocationCma_Chr12: 442992 .. 447189 (+)
RNA-Seq ExpressionCmaCh12G001080
SyntenyCmaCh12G001080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAGGTAGGGTTCAACTGAAAAGAATTGAGAACAAAATAAACAGGCAGGTTACTTTCTCCAAAAGGAAAGCTGGTTTGCTGAAGAAGGCTCATGAAATCTCTGTTCTCTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAGCTCTTTGAATACTCCTCTGATTCCAGGTCACCCCATTATTATTATTATTATTATTTATTATTTATTATTTTTGTGTCTTTTTTTTTGGTAAATTTAATGTTTTTGTTGTGTTTTTAGGGTTTTTAATGCAAACCCATTTAATTTCTTCATGTTTTCTAAAATGGGTCCCTCTTATTTTTCGTTTTTTTTATTTTTAACCTTAAATTTCTTTTAAATTCTGGTTATAAGAATGTGTTCATCTTTGGATTCTCTCTTTTTCCCCCATGGCCCCAAATATGGCTATGTCTTCTGATTTCCTGCTCCTCACTGCCACTTTACTCCCACTTCCTTTATCGATTAGGGTTTTTCTTCGTATCGCCATGCCCTATTCGCTTTAACTTTTGGGTTCAGTGGTGATTTCGTTACACCGATCTAGCAAATCCCATAAAACTTTCGTCTCCGACCCATTAATATGTTTTTTTTTCTCTCTCTCTCTCTACCATGTAACACCAACTTTCTTTCTTAAAATTCAACAGAATCGTAAAATCGAGTAAAAAATTACAATGAAGTTTAGGTTTTCCTTAAGGCTTGTTATGATCGTGTACCTAAGCTTGTGGGTTGAGTTGTGGTTTAATTAGATCTCGACTTGATGAAAGCGTGAAACTTTTATCTTGCTTTCTAATTAACTCGAGCGGGTTCTTTGATTTCGATCTTGGATCGAAATGTTTTGGATTTTTTTGAAATGGGTTGTTTTCGATTGAGTACAATGAGGCTTGAGTTTTTCTTAAGGCTTGTTATGATCAAGTACTTAAGCTAGTGAGTTGAGTCGTGATTTAATTAGATCTCGATTTAATGAAAGCTTGAAACTTTTAGCTTGCTTTCTACATTAACTCGAGCGGGTTCTTTGATTTCGATCTTAGATCGAACCATTTTGGATTTTTTGAAATGGGTTATTTTTGTATAGTGGAATTGATGATTTTCTAATAGATTTGAGCTTAGGTTTTGTACTTGTAAAGTGGTTGGTAGCAGAACAAAAGAAAGTGAACAGTTCCTGAAGCATGGGAATGAGGATCTAGTTTCCTCTACCCATTTGTTTATTTGCATGTGTTCTTCATATACAGTAATTAGACAGTGGTTTGGTAATGATTTTTAAGCCTATAGTTAATTATGTATATATATTTTTTCAATATCTTATATTATAAATTATAATGTGTATGAAATTCTTAGGTTTTGGAAGTTAAAGGTATGTCAAATATTGTGTAACATAATGTATTAAATTGAATTATGACAAAAATAATGAAGTAATTTGAGAAACAGAACAGTAACCTAGTTATCTAGACATGTTTTTTAATGTTATTATTGTTTTATTTGTAAATTAATAGGTAAATATTGTTTTTTGTTTATTGTTCTCTAAAATTTATTATTTTTCAACTAATTTAATTTAGAAATAGAATATTATTGAGAAAACAGTTTGAAAATAAGGAACATATGATGTTTTGAAACTAATCAATGGTTTGTCGGGGGATTTTTATGTTTTTCGTTTATTATTATTATTTTTTGTAATTATTTTTTGTGGAAAGATGAAAATATTTAAGAAGCTTAACTTTTATAAGCAAATAATTACTGTTTTAATTCTCAAAATTTTTTTTTTTTAAGAAACTATTTTTATTAATGATTTTGAAAATATTAAGCAAAAAACTTGTAGCAATATTTCTGGAAAACATCCTTAAAATTTACATGTGTTTTATGTAATCTCCTATGTTTCTCTGTAAAAAAAAACAAAGAAGGAAATGATATTACATTTTTTTGTTTTACGTCATTGTAGTACATGATTATTTGTCAATTTGAGTATCACTCAATTAGTTAATATATATATATATATATATGATTGATTAAGAGGTCATAGTTACGAATCTCTTATCTCTACTTATCATTAACTAAAAAAGAATTCATTATCTTGAGATGAATCGAGAGATTCAAAGCTTGAACTTTCACGTCGAGAATACATAGCTCAACTTTGAACTATGCACGGAGTTATCACATTGATTTTGCATGTGATCTTTATACAGATTCATGAATTATTTTACTCAAATTTAGGGCTTTCTTCAAGAACAATATAAAATTCTCAACTTTTGGTTGAGAAAAGATAAACCCTAACCCTAATTGAAGCGTTCATGAGTGTTCTAATTCAAAGTAAGAGAGAGATGATTTGATGGGAAAGATGTTATTCTTGTCTAGGACAAGACATGATATAGAACAGTAACACCTAGTGTTTATATGCTTCAAATCTAGGCCCTAACTTTCAAAACCCCTTTGTTTATTCCAAATCCTTTAATATATATATAATATTTGGCTGTCAATTCAGCTTAAATCATTTCTAACAGTGATTGGTTGATGTTTTATATTAATGGTTGCTTCTTATGTGAGAGATTGATACTCAGAGATTGAATTGATGGAGAGAGATAGATATCATTTAATTTTGAGATCATTATCTATACTGTTCATAACACCAATTCTTTTATTTTCTTTTTCAAATTTGTTTATGATATTAGTTTGGGAAGGTTTATCCTTTAAATCTTGTTTTTTTTGGCAAATTTTGGATTAGGGTTTGTGATAAACTTTGGATATCGAGTGATCGAGCTGAAATTAGGGTGAAATTTAGTTTTCGATTTGGAAACAGATCTTGTATGGGTTAAGTTGCTCGAGGTTCTTTCGATTCATGGGTTTTTATTGAGTTGATTATTTTAGTTTAATGATGTAGAGTTGAGATTCGAGTATGTAACTTTATCACTCTGCTTACGCTTTTGATTTTACAAATTTTGTTATTGCAGTATGGAGAAAATACTCGAACGATATGAACGATATTCGTATGTGGGCAGGCAACAAATTGCAGCTACTGAATCTGAATTTTCACAGGAAAATTGGACTCTCGAGTATTATAGACTCAAATCCCGAGTCGAACTCTTACAAAGAAACAACAGGTAAGTTCATACAACGTTGTACATGTCGAAGTCTCGATCTCTATCTCTCGTTATTAATATCGATATCATGTCGATGAAAATTTAATACTCAGTTCTTGATAATTGCAGTCATTACATGGGAGAAGATTTGGATTCATTAAGCGTTAAAGAACTGCAAAACTTGGAGCAACAAATCGACACTGCACTCAAACATGTTCGATCGAGGAAAGTAAGGATGCTTGAATTTCATGTTTTTATGTTTTTTCTTTTTTTAATGGTTTTTTTAATTAATATATATTGAAATTTTTGTTTCAGAACCAACTCATGCATGATTCCATCTCTGCTCTTCAGAGAAAGGCAAATTTCTCTTACTTTTTTCATCTTTTTTTTAATCTTTAAAATAATTTAATTTTTCGATTTTGTTCTAATTAATTTACTTCACATTCTCATTTATTTTTACTAGGAACGAGCAATTCAGGAACAAAACGCTCTCCTAGCAAAGCAGGTGATAGTAACATTTAGTTTAAAACGCTATTTTTTCGTTTAAAATATAATCTAACTTATTCATTTAAGCTTTAGTTTACGATGCTTAATTATAATTTATGTTCGGTTAAACGAAATTAAGATCAAGGAGAAGGAGAAGAGTGCAGCAATGGCTCAGCAGGCCGAGTGGGAGCAGCAGCAGCAACATGGTTACAATGCACTGTCTTTCTTGTTTCCATCAGCCCCTCACCCGTCTCTAAACATCGGGTAATCTTTCACTAGTTTTTCGAGTTCATAATGACTTTTGAAACTCGATAACGTTACATGTTCTTTACTTTTGAACGTATAGGCTTGCGAGTTTTGATGGTCACCTATGAATCCCGTTGCACGTTGGGAGATTCGAGCCATCGGGAAGAAGAAGAAGAAGAAGACGGTGATGGTGACGGGGGCGGGTTGAATAATGGAAATAGAATGGATTAATTATAACTTATATGTGTAATGGATGGCTAATATGTATGGAGGGTTTGCACTTGTGGAGGTTTTGTTGTGTTAAGTGAAAGACAGTATATGAACTACTTTTTGTTGTGTTGTTATTTTGTGGTGATATTGTTGTGGCC

mRNA sequence

ATGGGAAGAGGTAGGGTTCAACTGAAAAGAATTGAGAACAAAATAAACAGGCAGGTTACTTTCTCCAAAAGGAAAGCTGGTTTGCTGAAGAAGGCTCATGAAATCTCTGTTCTCTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAGCTCTTTGAATACTCCTCTGATTCCAGTATGGAGAAAATACTCGAACGATATGAACGATATTCGTATGTGGGCAGGCAACAAATTGCAGCTACTGAATCTGAATTTTCACAGGAAAATTGGACTCTCGAGTATTATAGACTCAAATCCCGAGTCGAACTCTTACAAAGAAACAACAGTCATTACATGGGAGAAGATTTGGATTCATTAAGCGTTAAAGAACTGCAAAACTTGGAGCAACAAATCGACACTGCACTCAAACATGTTCGATCGAGGAAAGAACGAGCAATTCAGGAACAAAACGCTCTCCTAGCAAAGCAGATCAAGGAGAAGGAGAAGAGTGCAGCAATGGCTCAGCAGGCCGAGTGGGAGCAGCAGCAGCAACATGGTTACAATGCACTGTCTTTCTTGTTTCCATCAGCCCCTCACCCGTCTCTAAACATCGGGCTTGCGAGTTTTGATGGTCACCTATGAATCCCGTTGCACGTTGGGAGATTCGAGCCATCGGGAAGAAGAAGAAGAAGAAGACGGTGATGGTGACGGGGGCGGGTTGAATAATGGAAATAGAATGGATTAATTATAACTTATATGTGTAATGGATGGCTAATATGTATGGAGGGTTTGCACTTGTGGAGGTTTTGTTGTGTTAAGTGAAAGACAGTATATGAACTACTTTTTGTTGTGTTGTTATTTTGTGGTGATATTGTTGTGGCC

Coding sequence (CDS)

ATGGGAAGAGGTAGGGTTCAACTGAAAAGAATTGAGAACAAAATAAACAGGCAGGTTACTTTCTCCAAAAGGAAAGCTGGTTTGCTGAAGAAGGCTCATGAAATCTCTGTTCTCTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAGCTCTTTGAATACTCCTCTGATTCCAGTATGGAGAAAATACTCGAACGATATGAACGATATTCGTATGTGGGCAGGCAACAAATTGCAGCTACTGAATCTGAATTTTCACAGGAAAATTGGACTCTCGAGTATTATAGACTCAAATCCCGAGTCGAACTCTTACAAAGAAACAACAGTCATTACATGGGAGAAGATTTGGATTCATTAAGCGTTAAAGAACTGCAAAACTTGGAGCAACAAATCGACACTGCACTCAAACATGTTCGATCGAGGAAAGAACGAGCAATTCAGGAACAAAACGCTCTCCTAGCAAAGCAGATCAAGGAGAAGGAGAAGAGTGCAGCAATGGCTCAGCAGGCCGAGTGGGAGCAGCAGCAGCAACATGGTTACAATGCACTGTCTTTCTTGTTTCCATCAGCCCCTCACCCGTCTCTAAACATCGGGCTTGCGAGTTTTGATGGTCACCTATGA

Protein sequence

MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQIKEKEKSAAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL
Homology
[Close]
BLAST of CmaCh12G001080 vs. ExPASy Swiss-Prot
Match: Q6E6S7 (Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.0e-67
Identity = 149/215 (69.30%), Postives = 172/215 (80.00%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+ GLLKKAHEISVLCDAEVALIVFS KGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKIL+RYERYSY  R Q+ AT+ E SQ NW+LEY +LK+++ELLQR+  H++GEDLD
Sbjct: 61  SCMEKILDRYERYSYAER-QLTATDPE-SQGNWSLEYSKLKAKIELLQRSQRHFLGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLS+KELQNLEQQ+DTALKH+RS              RKE+A+QEQN +LAK+IKEKEK+
Sbjct: 121 SLSLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKEIKEKEKT 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIG 202
             +AQQ  WE QQ HG N  SFL P    P LN+G
Sbjct: 181 --VAQQTHWE-QQNHGLNTSSFLLPQ-QLPCLNMG 209

[Close]
BLAST of CmaCh12G001080 vs. ExPASy Swiss-Prot
Match: Q96355 (Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 GN=1AP1 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-65
Identity = 145/227 (63.88%), Postives = 171/227 (75.33%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 AAMAQQAEWEQQQQHGYNALS------------FLFPSAPHPSLNIG 202
             MAQQ +W+ QQ HG N  S            ++    P P LN+G
Sbjct: 181 VLMAQQEQWD-QQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]
BLAST of CmaCh12G001080 vs. ExPASy Swiss-Prot
Match: B4YPV4 (Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra OX=3714 GN=AP1C PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-65
Identity = 145/227 (63.88%), Postives = 171/227 (75.33%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 AAMAQQAEWEQQQQHGYNALS------------FLFPSAPHPSLNIG 202
             MAQQ +W+ QQ HG N  S            ++    P P LN+G
Sbjct: 181 VLMAQQEQWD-QQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]
BLAST of CmaCh12G001080 vs. ExPASy Swiss-Prot
Match: Q8GTF4 (Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. botrytis OX=3715 GN=AP1C PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-65
Identity = 145/227 (63.88%), Postives = 171/227 (75.33%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 AAMAQQAEWEQQQQHGYNALS------------FLFPSAPHPSLNIG 202
             MAQQ +W+ QQ HG N  S            ++    P P LN+G
Sbjct: 181 VLMAQQEQWD-QQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]
BLAST of CmaCh12G001080 vs. ExPASy Swiss-Prot
Match: Q41276 (Floral homeotic protein APETALA 1 OS=Sinapis alba OX=3728 GN=AP1 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.1e-65
Identity = 144/225 (64.00%), Postives = 171/225 (76.00%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK 
Sbjct: 121 AMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 AAMAQQAEWEQQQQHGYN----------ALSFLFPSAPHPSLNIG 202
              AQQ +W+ QQ HG+N             ++    P P LN+G
Sbjct: 181 ILRAQQEQWD-QQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMG 221

[Close]
BLAST of CmaCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1KPM9 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN=LOC111496100 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.9e-104
Identity = 209/223 (93.72%), Postives = 209/223 (93.72%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 210
           AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL
Sbjct: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 223

[Close]
BLAST of CmaCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1GHU4 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 GN=LOC111454319 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 208/223 (93.27%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 210
            AMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL
Sbjct: 181 VAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 223

[Close]
BLAST of CmaCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1BSN0 (truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673 GN=LOC111004981 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.9e-95
Identity = 193/224 (86.16%), Postives = 204/224 (91.07%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALI+FSHKGKLFEY++D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALILFSHKGKLFEYATD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIA +E+EFSQENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIALSETEFSQENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKH+RS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHIRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWE--QQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 209
            AMAQQAEWE  QQQ HGY+ALSFLFP+ PHPSLNIGLASF+G+
Sbjct: 181 VAMAQQAEWEHQQQQHHGYSALSFLFPTPPHPSLNIGLASFEGN 224

[Close]
BLAST of CmaCh12G001080 vs. ExPASy TrEMBL
Match: A0A1S3BCQ3 (truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC103488455 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.3e-93
Identity = 188/222 (84.68%), Postives = 196/222 (88.29%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ AA+ES FS ENWTLEYYRLKS+VELLQRNNSHY+GEDLD
Sbjct: 61  SSMEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRSRKE--------------RAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRSRK               R I+E NA LAK+IKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKEIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 209
            A+AQQAEWE QQ HGY+ALSFLFP  PHPSLNIGLASFDGH
Sbjct: 181 VALAQQAEWEHQQHHGYSALSFLFPPPPHPSLNIGLASFDGH 222

[Close]
BLAST of CmaCh12G001080 vs. ExPASy TrEMBL
Match: A0A1U8M7T9 (truncated transcription factor CAULIFLOWER D-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107934869 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.5e-74
Identity = 158/205 (77.07%), Postives = 181/205 (88.29%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVALIVFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKILERYERYSY  R Q+ ATES+  Q NW++EY RLK++V+LLQ+N+ HYMGEDLD
Sbjct: 61  SCMEKILERYERYSYAER-QLVATESQ-PQGNWSMEYNRLKAKVDLLQKNHRHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--RKERAIQEQNALLAKQIKEKEKSAAMAQQAEW-EQ 180
           SLS+KELQNLEQQ+DTA+KH+RS  RKE+AIQEQNA+LAKQIK++EK+ A AQQ++W +Q
Sbjct: 121 SLSLKELQNLEQQLDTAIKHIRSKKRKEKAIQEQNAMLAKQIKDREKTVAQAQQSQWGQQ 180

Query: 181 QQQHGYNA-LSFLFPSAPHPSLNIG 202
           QQQ G N   SFL P  PHP LNIG
Sbjct: 181 QQQLGLNTPTSFLLPQPPHPCLNIG 203

[Close]
BLAST of CmaCh12G001080 vs. NCBI nr
Match: XP_023002154.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 209/223 (93.72%), Postives = 209/223 (93.72%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 210
           AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL
Sbjct: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 223

[Close]
BLAST of CmaCh12G001080 vs. NCBI nr
Match: XP_022951531.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_023537553.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo] >KAG6585254.1 Agamous-like MADS-box protein AP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020176.1 Floral homeotic protein APETALA 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.8 bits (987), Expect = 4.7e-103
Identity = 208/223 (93.27%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 210
            AMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL
Sbjct: 181 VAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL 223

[Close]
BLAST of CmaCh12G001080 vs. NCBI nr
Match: XP_038886329.1 (truncated transcription factor CAULIFLOWER A-like [Benincasa hispida])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 203/222 (91.44%), Postives = 205/222 (92.34%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIAA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIAASESEFSHENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVRS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 209
            AMAQQAEWEQQQ HGYNALSFLFPSAPHPSLNIGLASFDGH
Sbjct: 181 VAMAQQAEWEQQQHHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]
BLAST of CmaCh12G001080 vs. NCBI nr
Match: XP_022132007.1 (truncated transcription factor CAULIFLOWER A-like [Momordica charantia])

HSP 1 Score: 357.5 bits (916), Expect = 8.1e-95
Identity = 193/224 (86.16%), Postives = 204/224 (91.07%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALI+FSHKGKLFEY++D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALILFSHKGKLFEYATD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYSYVGRQQIA +E+EFSQENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSYVGRQQIALSETEFSQENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKH+RS              RKERAIQEQNALLAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHIRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKS 180

Query: 181 AAMAQQAEWE--QQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 209
            AMAQQAEWE  QQQ HGY+ALSFLFP+ PHPSLNIGLASF+G+
Sbjct: 181 VAMAQQAEWEHQQQQHHGYSALSFLFPTPPHPSLNIGLASFEGN 224

[Close]
BLAST of CmaCh12G001080 vs. NCBI nr
Match: XP_004144163.1 (truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus] >KAE8647256.1 hypothetical protein Csa_018276 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 4.4e-93
Identity = 190/222 (85.59%), Postives = 196/222 (88.29%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSMEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLD
Sbjct: 61  SSMEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRSRKE--------------RAIQEQNALLAKQIKEKEKS 180
           SLSVKELQNLEQQIDTALKHVR+RK               R I+E N  LAKQIKEKEKS
Sbjct: 121 SLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKS 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 209
            A+AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 181 VALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 222

[Close]
BLAST of CmaCh12G001080 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 245.0 bits (624), Expect = 5.5e-65
Identity = 143/227 (63.00%), Postives = 171/227 (75.33%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL 
Sbjct: 61  SCMEKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 SLSVKELQNLEQQIDTALKHVRSR--------------KERAIQEQNALLAKQIKEKEKS 180
           ++S KELQNLEQQ+DTALKH+R+R              KE+AIQEQN++L+KQIKE+EK 
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK- 180

Query: 181 AAMAQQAEWEQQQQHGYN------------ALSFLFPSAPHPSLNIG 202
              AQQ +W+QQ Q G+N               ++    P P LN+G
Sbjct: 181 ILRAQQEQWDQQNQ-GHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]
BLAST of CmaCh12G001080 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 122/191 (63.87%), Postives = 151/191 (79.06%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRV+LKRIENKINRQVTFSKR+ GLLKKA EISVLCDAEV+LIVFSHKGKLFEYSS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S MEK+LERYERYSY  RQ IA      +Q NW++EY RLK+++ELL+RN  HY+GE+L+
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 178
            +S+K+LQNLEQQ++TALKH+RS              RKE+ IQE+N++L KQIKE+E +
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE-N 180

[Close]
BLAST of CmaCh12G001080 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 120/205 (58.54%), Postives = 150/205 (73.17%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQLKRIENKINRQVTFSKR++GLLKKAHEISVLCDAEVALIVFS KGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           S ME+ILERY+RY Y  +Q +    S+   ENW LE+ +LK+RVE+L++N  ++MGEDLD
Sbjct: 61  SCMERILERYDRYLYSDKQLVGRDVSQ--SENWVLEHAKLKARVEVLEKNKRNFMGEDLD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRSR--------------KERAIQEQNALLAKQIKEKEKS 180
           SLS+KELQ+LE Q+D A+K +RSR              K++A+Q+ N  L K+IKE+EK 
Sbjct: 121 SLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK- 180

Query: 181 AAMAQQAEWEQQQQHGYNALSFLFP 192
               +  + E Q     N+ S L P
Sbjct: 181 ----KTGQQEGQLVQCSNSSSVLLP 198

[Close]
BLAST of CmaCh12G001080 vs. TAIR 10
Match: AT3G30260.1 (AGAMOUS-like 79 )

HSP 1 Score: 165.2 bits (417), Expect = 5.5e-41
Identity = 106/201 (52.74%), Postives = 136/201 (67.66%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRVQL+RIENKI RQVTFSKR+ GL+KKA EISVLCDAEVALIVFS KGKLFEYS+ 
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSME+IL+RYER +Y G  Q   T +  SQ   + E  +L   +++LQR+  H  GE++D
Sbjct: 61  SSMERILDRYERSAYAG--QDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVD 120

Query: 121 SLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQIKE----KEKSAAMAQQAEWE 180
            LS+++LQ +E Q+DTALK  RSRK + + E  A L K+ KE    K++    A + E  
Sbjct: 121 GLSIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDF 180

Query: 181 QQQQHGYNALSFLFP--SAPH 196
           Q Q   ++  S   P   +PH
Sbjct: 181 QTQNLSHDLASLATPPFESPH 199

[Close]
BLAST of CmaCh12G001080 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36
Identity = 97/224 (43.30%), Postives = 136/224 (60.71%), Query Frame = 0 

Query: 1   MGRGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSD 60
           MGRGRV+LKRIENKINRQVTF+KR+ GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLD 120
           SSM + LERY++ +Y   +    +    ++ +   EY +LK R + LQR   + +GEDL 
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 SLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKS 180
            LS KEL++LE+Q+D++LK +R+               KER + E N  L  ++ +  + 
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM 180

Query: 181 AAMAQQAEWE---------QQQQHGYNALSFLFPSAPHPSLNIG 202
                  + E         QQQQH   + +F  P    P L IG
Sbjct: 181 PLQLNPNQEEVDHYGRHHHQQQQH---SQAFFQPLECEPILQIG 221

The following BLAST results are available for this feature:
BLAST of CmaCh12G001080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6E6S72.0e-6769.30Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1[more]
Q963554.1e-6563.88Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 G... [more]
B4YPV44.1e-6563.88Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra OX=3714... [more]
Q8GTF44.1e-6563.88Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. botrytis OX=3715 G... [more]
Q412769.1e-6564.00Floral homeotic protein APETALA 1 OS=Sinapis alba OX=3728 GN=AP1 PE=2 SV=1[more]
BLAST of CmaCh12G001080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KPM97.9e-10493.72truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1GHU42.3e-10393.27truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1BSN03.9e-9586.16truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673... [more]
A0A1S3BCQ36.3e-9384.68truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A1U8M7T96.5e-7477.07truncated transcription factor CAULIFLOWER D-like isoform X2 OS=Gossypium hirsut... [more]
BLAST of CmaCh12G001080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023002154.11.6e-10393.72truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima][more]
XP_022951531.14.7e-10393.27truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_02353... [more]
XP_038886329.11.3e-10091.44truncated transcription factor CAULIFLOWER A-like [Benincasa hispida][more]
XP_022132007.18.1e-9586.16truncated transcription factor CAULIFLOWER A-like [Momordica charantia][more]
XP_004144163.14.4e-9385.59truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus] >KAE86... [more]
BLAST of CmaCh12G001080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G69120.15.5e-6563.00K-box region and MADS-box transcription factor family protein [more]
AT1G26310.11.0e-5863.87K-box region and MADS-box transcription factor family protein [more]
AT5G60910.11.1e-5258.54AGAMOUS-like 8 [more]
AT3G30260.15.5e-4152.74AGAMOUS-like 79 [more]
AT1G24260.12.4e-3643.30K-box region and MADS-box transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 1..187
NoneNo IPR availablePANTHERPTHR48019:SF79TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER Acoord: 1..187
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 65.42
coord: 23..38
score: 73.71
coord: 3..23
score: 70.24
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 1.1E-40
score: 151.2
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 1.2E-25
score: 88.8
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 32.085411
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 85..165
e-value: 4.3E-20
score: 71.7
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 90..181
score: 14.597011
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 13..86
e-value: 6.9E-28
score: 98.3
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..83
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 2..79
e-value: 4.77899E-43
score: 137.298

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G001080.1CmaCh12G001080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding