CmaCh12G000490 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G000490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein HHL1, chloroplastic-like
Location	Cma_Chr12: 184873 .. 186891 (+)
RNA-Seq Expression	CmaCh12G000490
Synteny	CmaCh12G000490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATCCAAATCAAAATAGTAATTTCCACCAACCCCAATTTTATTTTCAAAAATAGTATAATGGTTGAGAAATTAGAGGAGTAAATTGCAAGTGTTTACGTGCGTGAGATTGTGCCAGGCGTGTGGGTGGAGATCGGTGGCCCCACAGCCATACTGGTGGATAAGATCGGAGGAGAAGAACCATCCTCTAACTTCAACTCCTCCCGCTCTGGCCAAATCCGATCACACAAATGGAGGTTGCCATGTCCCTCAACGCTCTGGTTCGACTCCCCCTTTCCACTTCCAAGCTACACCAAGATGCGCTGCTCCGCCACTCGCTCTTCTCCGCGAGGACGATGCAGAAGCCTGAGCGGAGGAATCGCCACGCTCTTGTGGTCCAAGCGAAAGGCAAACGGGGGATGCAAGCTCGTCGGTTCCAAAGGGCTGCGCCTCCCCCGCTACCCAAGATTGAAGACGATGGAAACCCTAAATTCGTTATCTTCATCCGTATGCCCAATGTTTGTTCTCTATCCTTTTTACTTTTCAGCTCCGGTTGTTTCTATTGATTCATATTTATTTTGCCTCTCTGGAATTGGTGCCGAGAATGGCGTGAGATTTGGAGTCGCTCTCAATTATATATAAACTGTATACTGTGTTCTTGGCCACTCATTGAATAGATTACATTCTAAACTATCTTGAAATATGGCATCAAGAGAAGTAGCTCATTATTAACTCAAAATCTGAAAAGGGTGAGGTTCGTGAAGTTCAATATATTGCACACAATTATTGGGAATATCATCCGTAACATCGTCCCCTTTTTCGTTGATTAAGCAGGTTTATCTATGGTACCCCTTGAGTCTTATAAATGGTGGCACAACCGCCAAAATCATGGTTGCAGCAAAAGATAATTTTCTTGGGAAATATATCTACAAAGACACTCTGGCTAGGAATCTTGCTGCTGTTATATACCGTGTAAGCTTTAATTTTCATCGATATTTTGCTCCATTATCCTGTTCTTTACGTCTTGTATTAAGCCGCCTGTGCCCGTTCAAATAAAATGAATTAAAGTTAAACCTTTTAATTTCAAAGGTGAATATAATGATGTTATTCTAGTTAAAACTTTGTATTGGTGATAAAAGGAACGTTAAAGCTCGTACTTTGACAAGTGAGTGGTTTTAAAAGAGATGTTCTTATCAGCACATGCGAGACTGCTGAATGTTTGAGAGCTCTCGTCGGTTTGGAGAAAGTTGCAATCACATAGGATTTAGAATTTGTCTGAAAATCTGACTTAACGTTGATTGTTCATATAGGAATTGATTGCCACAATTTCTGTCCATTGAGAAAAACAGACAATTCTACGCTTTCTTGTCACTTTGTTTTTGCAAAATTACTCAATTCTCAAGCCTTGAACGACAATTCATTCTAAACACTCTTTTAAGATACTAACACTCGATCTACCAATGAACAGGATGAAAAGGAGATACAGAAGACAGCATTTAAACAGTTCCGCGTGTTGCGGTCAGCAACAGAATTCAGATATGGCTACAAGATTGTTGTAATGTTTCCAAACCTTTCTTTATGATTCATGAGCACAATATTTTATATTGTACTTCGGAATGGATGAACAACAATTTGTTGTCGTAATGTTAATTATATACTTTCATGCAGCAAAATGGCAATGTGAGGTCCGCACTGTCTACCACAGATGTAATTGAGGTAAGAACGGATTATTTGTTCTCTTCTTTTGTTCTTGAGATTTTATAAGGATTGAAAAGGCAAATCCTTGAACACCATGTGGTGGTAATCTTTTCCTTTGTAACTTGTTTCAATCGGTGAGATTTTCGACTAGATCATTTAGTTTACTTACACAGTTTTATTTCTGAATCAATCTTAGCTTCCAACACAAGATCAGCTGAAGACGGTTCTCGATAAAGTTAAAGACTTCTTCGGAGATGCGAAGGAATCATTCGGCAAACTCACTACACTAGGCTCACTTGAAGGTGAGGAGTCAGACGAGAACTCGGCGGAGAAGACCAAGTGA

mRNA sequence

ACATCCAAATCAAAATAGTAATTTCCACCAACCCCAATTTTATTTTCAAAAATAGTATAATGGTTGAGAAATTAGAGGAGTAAATTGCAAGTGTTTACGTGCGTGAGATTGTGCCAGGCGTGTGGGTGGAGATCGGTGGCCCCACAGCCATACTGGTGGATAAGATCGGAGGAGAAGAACCATCCTCTAACTTCAACTCCTCCCGCTCTGGCCAAATCCGATCACACAAATGGAGGTTGCCATGTCCCTCAACGCTCTGGTTCGACTCCCCCTTTCCACTTCCAAGCTACACCAAGATGCGCTGCTCCGCCACTCGCTCTTCTCCGCGAGGACGATGCAGAAGCCTGAGCGGAGGAATCGCCACGCTCTTGTGGTCCAAGCGAAAGGCAAACGGGGGATGCAAGCTCGTCGGTTCCAAAGGGCTGCGCCTCCCCCGCTACCCAAGATTGAAGACGATGGAAACCCTAAATTCGTTATCTTCATCCGTATGCCCAATGTTTATCTATGGTACCCCTTGAGTCTTATAAATGGTGGCACAACCGCCAAAATCATGGTTGCAGCAAAAGATAATTTTCTTGGGAAATATATCTACAAAGACACTCTGGCTAGGAATCTTGCTGCTGTTATATACCGTGATGAAAAGGAGATACAGAAGACAGCATTTAAACAGTTCCGCGTGTTGCGGTCAGCAACAGAATTCAGATATGGCTACAAGATTGTTCAAAATGGCAATGTGAGGTCCGCACTGTCTACCACAGATGTAATTGAGCTTCCAACACAAGATCAGCTGAAGACGGTTCTCGATAAAGTTAAAGACTTCTTCGGAGATGCGAAGGAATCATTCGGCAAACTCACTACACTAGGCTCACTTGAAGGTGAGGAGTCAGACGAGAACTCGGCGGAGAAGACCAAGTGA

Coding sequence (CDS)

ATGGAGGTTGCCATGTCCCTCAACGCTCTGGTTCGACTCCCCCTTTCCACTTCCAAGCTACACCAAGATGCGCTGCTCCGCCACTCGCTCTTCTCCGCGAGGACGATGCAGAAGCCTGAGCGGAGGAATCGCCACGCTCTTGTGGTCCAAGCGAAAGGCAAACGGGGGATGCAAGCTCGTCGGTTCCAAAGGGCTGCGCCTCCCCCGCTACCCAAGATTGAAGACGATGGAAACCCTAAATTCGTTATCTTCATCCGTATGCCCAATGTTTATCTATGGTACCCCTTGAGTCTTATAAATGGTGGCACAACCGCCAAAATCATGGTTGCAGCAAAAGATAATTTTCTTGGGAAATATATCTACAAAGACACTCTGGCTAGGAATCTTGCTGCTGTTATATACCGTGATGAAAAGGAGATACAGAAGACAGCATTTAAACAGTTCCGCGTGTTGCGGTCAGCAACAGAATTCAGATATGGCTACAAGATTGTTCAAAATGGCAATGTGAGGTCCGCACTGTCTACCACAGATGTAATTGAGCTTCCAACACAAGATCAGCTGAAGACGGTTCTCGATAAAGTTAAAGACTTCTTCGGAGATGCGAAGGAATCATTCGGCAAACTCACTACACTAGGCTCACTTGAAGGTGAGGAGTCAGACGAGAACTCGGCGGAGAAGACCAAGTGA

Protein sequence

MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQARRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK

Homology

[Close]

BLAST of CmaCh12G000490 vs. ExPASy Swiss-Prot
Match: Q8LDL0 (Protein HHL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HHL1 PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.6e-86
Identity = 167/231 (72.29%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPL-STSKLHQDALLRHSLFSART--MQKPERRNRHALVVQAKGKRGM 60
           MEV+MSLNAL RLPL +T +  +  L RHSLFS+RT   +   ++ R   VV+AKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QARRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            AR++QR  PPP+PKIEDDGNP+FVIFIRM NVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTD 180
           KYIYKDT+ARN+AAVIYRDEKEIQKTA KQ RVLR+ATEFRYGYK+V+NGN+R+ALST+D
Sbjct: 121 KYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKLVENGNMRAALSTSD 180

Query: 181 VIELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           VIELPTQDQLKTV DKVKD+FGDAKESFGKL++L     E+++E S EK K
Sbjct: 181 VIELPTQDQLKTVFDKVKDYFGDAKESFGKLSSLNPGSDEKTEETSDEKAK 230

[Close]

BLAST of CmaCh12G000490 vs. ExPASy TrEMBL
Match: A0A6J1KPI4 (protein HHL1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496437 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60
           MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR
Sbjct: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60

Query: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180
           YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE
Sbjct: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180

Query: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK
Sbjct: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 228

[Close]

BLAST of CmaCh12G000490 vs. ExPASy TrEMBL
Match: A0A6J1GGZ0 (protein HHL1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111454099 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.8e-117
Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHA-LVVQAKGKRGMQA 60
           MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHA LVV+AKGK+GMQA
Sbjct: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALLVVEAKGKKGMQA 60

Query: 61  RRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKY 120
           RRFQRAAPPPLPKIEDDGNPKFVIFIRM NVYLWYPLSLINGGTTAKIMVAAKDNFLGKY
Sbjct: 61  RRFQRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKY 120

Query: 121 IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVI 180
           IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIV+NGNVRSALSTTDVI
Sbjct: 121 IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVENGNVRSALSTTDVI 180

Query: 181 ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK
Sbjct: 181 ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229

[Close]

BLAST of CmaCh12G000490 vs. ExPASy TrEMBL
Match: A0A6J1KDM2 (protein HHL1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492298 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108
Identity = 205/228 (89.91%), Postives = 217/228 (95.18%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60
           MEVAMSLNALVRLPLS SKL +D  +RHSLFS+RT+QKPERR+RH  VV+AKGK+GMQAR
Sbjct: 1   MEVAMSLNALVRLPLSNSKLAEDGRVRHSLFSSRTVQKPERRHRHTFVVEAKGKKGMQAR 60

Query: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           RFQ+AAPPPLPKIEDDGNPKFVIFIR  +VYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQKAAPPPLPKIEDDGNPKFVIFIRTADVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180
           YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLR+ATEFRYGYKIV+NGN+RSALSTTDVIE
Sbjct: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRTATEFRYGYKIVENGNLRSALSTTDVIE 180

Query: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           LPTQDQLKTVLDKVKDFFGDAKESFGKLT LGSLEGEESDENS EK K
Sbjct: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTALGSLEGEESDENSEEKAK 228

[Close]

BLAST of CmaCh12G000490 vs. ExPASy TrEMBL
Match: A0A6J1K4S0 (protein HHL1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492298 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108
Identity = 205/228 (89.91%), Postives = 217/228 (95.18%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60
           MEVAMSLNALVRLPLS SKL +D  +RHSLFS+RT+QKPERR+RH  VV+AKGK+GMQAR
Sbjct: 1   MEVAMSLNALVRLPLSNSKLAEDGRVRHSLFSSRTVQKPERRHRHTFVVEAKGKKGMQAR 60

Query: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           RFQ+AAPPPLPKIEDDGNPKFVIFIR  +VYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQKAAPPPLPKIEDDGNPKFVIFIRTADVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180
           YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLR+ATEFRYGYKIV+NGN+RSALSTTDVIE
Sbjct: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRTATEFRYGYKIVENGNLRSALSTTDVIE 180

Query: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           LPTQDQLKTVLDKVKDFFGDAKESFGKLT LGSLEGEESDENS EK K
Sbjct: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTALGSLEGEESDENSEEKAK 228

[Close]

BLAST of CmaCh12G000490 vs. ExPASy TrEMBL
Match: A0A6J1HBV5 (protein HHL1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462663 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 204/228 (89.47%), Postives = 216/228 (94.74%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60
           MEVAMSLNALVRLPLS SKL +D  +RHSLFS+RT+ KPERR+RH  VV+AKGK+GMQAR
Sbjct: 1   MEVAMSLNALVRLPLSNSKLAEDGRVRHSLFSSRTVPKPERRHRHTFVVEAKGKKGMQAR 60

Query: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           RFQ+AAPPPLPKIEDDGNPKFVIFIR  +VYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQKAAPPPLPKIEDDGNPKFVIFIRTADVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180
           YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLR+ATEFRYGYKIV+NGN+RSALSTTDVIE
Sbjct: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRTATEFRYGYKIVENGNLRSALSTTDVIE 180

Query: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           LPTQDQLKTVLDKVKDFFGDAKESFGKLT LGSLEGEESDENS EK K
Sbjct: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTALGSLEGEESDENSEEKAK 228

[Close]

BLAST of CmaCh12G000490 vs. NCBI nr
Match: XP_023002640.1 (protein HHL1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 6.1e-120
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60
           MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR
Sbjct: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60

Query: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180
           YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE
Sbjct: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180

Query: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK
Sbjct: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 228

[Close]

BLAST of CmaCh12G000490 vs. NCBI nr
Match: KAG7020114.1 (Protein HHL1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHA-LVVQAKGKRGMQA 60
           MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHA LVV+AKGK+GMQA
Sbjct: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALLVVEAKGKKGMQA 60

Query: 61  RRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKY 120
           RRFQRAAPPPLPKIEDDGNPKFVIFIRM NVYLWYPLSLINGGTTAKIMVAAKDNFLGKY
Sbjct: 61  RRFQRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKY 120

Query: 121 IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVI 180
           IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIV+NGNVRSALSTTDVI
Sbjct: 121 IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVENGNVRSALSTTDVI 180

Query: 181 ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK
Sbjct: 181 ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229

[Close]

BLAST of CmaCh12G000490 vs. NCBI nr
Match: XP_022951173.1 (protein HHL1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHA-LVVQAKGKRGMQA 60
           MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHA LVV+AKGK+GMQA
Sbjct: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALLVVEAKGKKGMQA 60

Query: 61  RRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKY 120
           RRFQRAAPPPLPKIEDDGNPKFVIFIRM NVYLWYPLSLINGGTTAKIMVAAKDNFLGKY
Sbjct: 61  RRFQRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKY 120

Query: 121 IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVI 180
           IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIV+NGNVRSALSTTDVI
Sbjct: 121 IYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVENGNVRSALSTTDVI 180

Query: 181 ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK
Sbjct: 181 ELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229

[Close]

BLAST of CmaCh12G000490 vs. NCBI nr
Match: XP_023538332.1 (protein HHL1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 219/226 (96.90%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 3   VAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQARRF 62
           VAMSLNALVRLPLSTSKLH+DALLRHSLFS RTMQKPERRNRHA VV+AKGK+GMQARRF
Sbjct: 56  VAMSLNALVRLPLSTSKLHEDALLRHSLFSTRTMQKPERRNRHAFVVEAKGKKGMQARRF 115

Query: 63  QRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYIYK 122
           QRAAPPPLPKIEDDGNPKFVIFIRM NVYLWYPLSLINGGTTAKIMVAAKDNFLGKYIYK
Sbjct: 116 QRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYIYK 175

Query: 123 DTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIELP 182
           DTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIV+NGNVRSALSTTDVIELP
Sbjct: 176 DTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVENGNVRSALSTTDVIELP 235

Query: 183 TQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           TQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK
Sbjct: 236 TQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 281

[Close]

BLAST of CmaCh12G000490 vs. NCBI nr
Match: XP_022997358.1 (protein HHL1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 401.4 bits (1030), Expect = 5.3e-108
Identity = 205/228 (89.91%), Postives = 217/228 (95.18%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSTSKLHQDALLRHSLFSARTMQKPERRNRHALVVQAKGKRGMQAR 60
           MEVAMSLNALVRLPLS SKL +D  +RHSLFS+RT+QKPERR+RH  VV+AKGK+GMQAR
Sbjct: 1   MEVAMSLNALVRLPLSNSKLAEDGRVRHSLFSSRTVQKPERRHRHTFVVEAKGKKGMQAR 60

Query: 61  RFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           RFQ+AAPPPLPKIEDDGNPKFVIFIR  +VYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQKAAPPPLPKIEDDGNPKFVIFIRTADVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTDVIE 180
           YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLR+ATEFRYGYKIV+NGN+RSALSTTDVIE
Sbjct: 121 YKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRTATEFRYGYKIVENGNLRSALSTTDVIE 180

Query: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           LPTQDQLKTVLDKVKDFFGDAKESFGKLT LGSLEGEESDENS EK K
Sbjct: 181 LPTQDQLKTVLDKVKDFFGDAKESFGKLTALGSLEGEESDENSEEKAK 228

[Close]

BLAST of CmaCh12G000490 vs. TAIR 10
Match: AT1G67700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 318.9 bits (816), Expect = 3.2e-87
Identity = 167/231 (72.29%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPL-STSKLHQDALLRHSLFSART--MQKPERRNRHALVVQAKGKRGM 60
           MEV+MSLNAL RLPL +T +  +  L RHSLFS+RT   +   ++ R   VV+AKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QARRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            AR++QR  PPP+PKIEDDGNP+FVIFIRM NVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTD 180
           KYIYKDT+ARN+AAVIYRDEKEIQKTA KQ RVLR+ATEFRYGYK+V+NGN+R+ALST+D
Sbjct: 121 KYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKLVENGNMRAALSTSD 180

Query: 181 VIELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           VIELPTQDQLKTV DKVKD+FGDAKESFGKL++L     E+++E S EK K
Sbjct: 181 VIELPTQDQLKTVFDKVKDYFGDAKESFGKLSSLNPGSDEKTEETSDEKAK 230

[Close]

BLAST of CmaCh12G000490 vs. TAIR 10
Match: AT1G67700.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 318.9 bits (816), Expect = 3.2e-87
Identity = 167/231 (72.29%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPL-STSKLHQDALLRHSLFSART--MQKPERRNRHALVVQAKGKRGM 60
           MEV+MSLNAL RLPL +T +  +  L RHSLFS+RT   +   ++ R   VV+AKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QARRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            AR++QR  PPP+PKIEDDGNP+FVIFIRM NVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTD 180
           KYIYKDT+ARN+AAVIYRDEKEIQKTA KQ RVLR+ATEFRYGYK+V+NGN+R+ALST+D
Sbjct: 121 KYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKLVENGNMRAALSTSD 180

Query: 181 VIELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           VIELPTQDQLKTV DKVKD+FGDAKESFGKL++L     E+++E S EK K
Sbjct: 181 VIELPTQDQLKTVFDKVKDYFGDAKESFGKLSSLNPGSDEKTEETSDEKAK 230

[Close]

BLAST of CmaCh12G000490 vs. TAIR 10
Match: AT1G67700.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-85
Identity = 166/231 (71.86%), Postives = 195/231 (84.42%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPL-STSKLHQDALLRHSLFSART--MQKPERRNRHALVVQAKGKRGM 60
           MEV+MSLNAL RLPL +T +  +  L RHSLFS+RT   +   ++ R   VV+AKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QARRFQRAAPPPLPKIEDDGNPKFVIFIRMPNVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            AR++QR  PPP+PKIEDDGNP+FVIFIRM NVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKIVQNGNVRSALSTTD 180
           KYIYKDT+ARN+AAVIYRDEKEIQKTA KQ RVLR+ATEFRYGYK+ +NGN+R+ALST+D
Sbjct: 121 KYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKL-ENGNMRAALSTSD 180

Query: 181 VIELPTQDQLKTVLDKVKDFFGDAKESFGKLTTLGSLEGEESDENSAEKTK 229
           VIELPTQDQLKTV DKVKD+FGDAKESFGKL++L     E+++E S EK K
Sbjct: 181 VIELPTQDQLKTVFDKVKDYFGDAKESFGKLSSLNPGSDEKTEETSDEKAK 229

The following BLAST results are available for this feature:

BLAST of CmaCh12G000490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDL0	4.6e-86	72.29	Protein HHL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HHL1 PE=1 SV=1	[more]

BLAST of CmaCh12G000490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPI4	2.9e-120	100.00	protein HHL1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496437 PE=...	[more]
A0A6J1GGZ0	6.8e-117	97.82	protein HHL1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111454099 P...	[more]
A0A6J1KDM2	2.6e-108	89.91	protein HHL1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1K4S0	2.6e-108	89.91	protein HHL1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HBV5	1.3e-107	89.47	protein HHL1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CmaCh12G000490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002640.1	6.1e-120	100.00	protein HHL1, chloroplastic-like [Cucurbita maxima]	[more]
KAG7020114.1	1.4e-116	97.82	Protein HHL1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951173.1	1.4e-116	97.82	protein HHL1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023538332.1	1.5e-115	96.90	protein HHL1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022997358.1	5.3e-108	89.91	protein HHL1, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]

BLAST of CmaCh12G000490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67700.1	3.2e-87	72.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67700.2	3.2e-87	72.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67700.3	2.3e-85	71.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48191	PROTEIN HHL1 CHLOROPLASTIC	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G000490.1	CmaCh12G000490.1	mRNA