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CmaCh11G018550 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCATCAATTAGATCAGCTTGTGTTGTAGCGGCCAGCGTCGGCGTTGTGGAGGCCCTCAAGGATCAAGGGATTTGCCGGTGGAATAACGTCTTAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCTCTTTCTCAGGCCAAGAAGTTTTCCTCCTCCTCCTCCGCCGCCGCCACTGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTTCCTCAGCTGTTGGGGTCCTAACAATTGAACCGTACCGCCCCTGAGCTTCAAAGATACGCTTGAAAAACATTCAAATCGAGACTACGGCGGAACCGGCGGCGGTTCGAGCGAAGTGATATAGATATTGATATGGTTTGGGGATGTAATTAATGGGATGCTTTGGGCGTTTGATTCTTATATGAACAACTGTAAAAGCAATTCCCCTTGGTTCTTGTTTCTTTATTAAATACAATTGTTTCCTAATTCTTTATGTTGCCAATTTCAAAATATATTCCCAATTGAAACCGAGCTCAAAAACGGAGTGGGAAATGACAATAATACCCCTCCCTTACAATGTACCTTGTTTCACAAAGAGCGGCAGAATCCTCCGGTCTAGAAAGGCAGTTTCTCCCGCATAATTCCAACTTTACCCCTCACATTTCTGTCAAAAGAACCCGGTTACTAGGGGCAATCAAGTCCAAGAATTATTAGTCAAGTTTCGCTAATAAACAAAATGTCTTTTCTACCCTTCTCTAGCTTCACTCGAGAGATATTCTGCGGTTTACTCTCCTCGCTTCCCGGGGAATTAAAGAAAAAACCAGGGGCCTTTTTGGAATAATCTCTATAAAACTCTCAAAATATTCCAACATTTCAGAACAGAGACAGAACAGAGATGAGTTCATCAACAAGAGCTTGGGTTGTCGCCGCCAGTGTCGGAGTGGTGGAGGCCTTGAAAGATCAAGGGGTTTTCCGGTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGCGAGATCTGCTTTGCCGGTCAAGAAGCTTTCTTCGCCGTCGTCTGCGGCGGTTTCCGATCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTCCTTTCCTGACATACTGTTCTATGAAACATGCATATGTCGAGGTTGCTTCGATTGTTCTTCTTAG ATGAGCTCATCAATTAGATCAGCTTGTGTTGTAGCGGCCAGCGTCGGCGTTGTGGAGGCCCTCAAGGATCAAGGGATTTGCCGGTGGAATAACGTCTTAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCTCTTTCTCAGGCCAAGAAGTTTTCCTCCTCCTCCTCCGCCGCCGCCACTGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGAACAGAGACAGAACAGAGATGAGTTCATCAACAAGAGCTTGGGTTGTCGCCGCCAGTGTCGGAGTGGTGGAGGCCTTGAAAGATCAAGGGGTTTTCCGGTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGCGAGATCTGCTTTGCCGGTCAAGAAGCTTTCTTCGCCGTCGTCTGCGGCGGTTTCCGATCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTCCTTTCCTGACATACTGTTCTATGAAACATGCATATGTCGAGGTTGCTTCGATTGTTCTTCTTAG ATGAGCTCATCAATTAGATCAGCTTGTGTTGTAGCGGCCAGCGTCGGCGTTGTGGAGGCCCTCAAGGATCAAGGGATTTGCCGGTGGAATAACGTCTTAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCTCTTTCTCAGGCCAAGAAGTTTTCCTCCTCCTCCTCCGCCGCCGCCACTGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGAACAGAGACAGAACAGAGATGAGTTCATCAACAAGAGCTTGGGTTGTCGCCGCCAGTGTCGGAGTGGTGGAGGCCTTGAAAGATCAAGGGGTTTTCCGGTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGCGAGATCTGCTTTGCCGGTCAAGAAGCTTTCTTCGCCGTCGTCTGCGGCGGTTTCCGATCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTCCTTTCCTGACATACTGTTCTATGAAACATGCATATGTCGAGGTTGCTTCGATTGTTCTTCTTAG MSSSIRSACVVAASVGVVEALKDQGICRWNNVLRSAQFYAKNHVGSLSQAKKFSSSSSAAATAVASGKQQNQSEESLRTNRDRTEMSSSTRAWVVAASVGVVEALKDQGVFRWNHTIRSVQQYAKSHARSALPVKKLSSPSSAAVSDQKWKQSEESLRTVMSFPDILFYETCICRGCFDCSS Homology
BLAST of CmaCh11G018550 vs. ExPASy TrEMBL
Match: A0A7J9FRS2 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_025581 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 4.2e-37 Identity = 104/166 (62.65%), Postives = 120/166 (72.29%), Query Frame = 0
BLAST of CmaCh11G018550 vs. ExPASy TrEMBL
Match: A0A2P5Y0V7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11414 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 8.0e-36 Identity = 101/166 (60.84%), Postives = 118/166 (71.08%), Query Frame = 0
BLAST of CmaCh11G018550 vs. ExPASy TrEMBL
Match: A0A7J8RKR7 (Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_014281 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 7.5e-34 Identity = 97/162 (59.88%), Postives = 114/162 (70.37%), Query Frame = 0
BLAST of CmaCh11G018550 vs. ExPASy TrEMBL
Match: A0A5N5J0L6 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_030026 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 7.5e-34 Identity = 94/163 (57.67%), Postives = 115/163 (70.55%), Query Frame = 0
BLAST of CmaCh11G018550 vs. ExPASy TrEMBL
Match: A0A371GTU6 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_23701 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 96/162 (59.26%), Postives = 115/162 (70.99%), Query Frame = 0
BLAST of CmaCh11G018550 vs. NCBI nr
Match: KAG7022896.1 (hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.5 bits (615), Expect = 5.6e-60 Identity = 140/165 (84.85%), Postives = 148/165 (89.70%), Query Frame = 0
BLAST of CmaCh11G018550 vs. NCBI nr
Match: KAE8645761.1 (hypothetical protein Csa_020242 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41 Identity = 102/152 (67.11%), Postives = 118/152 (77.63%), Query Frame = 0
BLAST of CmaCh11G018550 vs. NCBI nr
Match: MBA0787983.1 (hypothetical protein [Gossypium trilobum]) HSP 1 Score: 164.5 bits (415), Expect = 8.8e-37 Identity = 104/166 (62.65%), Postives = 120/166 (72.29%), Query Frame = 0
BLAST of CmaCh11G018550 vs. NCBI nr
Match: PPS09223.1 (hypothetical protein GOBAR_AA11414 [Gossypium barbadense]) HSP 1 Score: 160.2 bits (404), Expect = 1.7e-35 Identity = 101/166 (60.84%), Postives = 118/166 (71.08%), Query Frame = 0
BLAST of CmaCh11G018550 vs. NCBI nr
Match: KAG6738968.1 (hypothetical protein POTOM_058603 [Populus tomentosa]) HSP 1 Score: 155.6 bits (392), Expect = 4.1e-34 Identity = 96/168 (57.14%), Postives = 120/168 (71.43%), Query Frame = 0
BLAST of CmaCh11G018550 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 78.2 bits (191), Expect = 7.7e-15 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of CmaCh11G018550 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 68.9 bits (167), Expect = 4.7e-12 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of CmaCh11G018550 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04 Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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