CmaCh11G018330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G018330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Actin-related protein 8
Location	Cma_Chr11: 12245204 .. 12246153 (+)
RNA-Seq Expression	CmaCh11G018330
Synteny	CmaCh11G018330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAGCTCTCATCTCACGCTCTCAACATTCATTGAATGGACAAGAAGAACGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAAGCGGAGGAGAGTGGGTGGACGGAGTATCTGGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGCGGGAGCTGTAGTTGGGATATTTCAGAAGCCAATAAGGAAAAAATCAATGCTTTAACCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCCTCAAAAAAACAACAACTCAGACGATTTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTACCCTTTAATTCTCTCTTTTTCATCTCATTTTTGCTTTATTTTTCATTTTTTCATTCAATTTTTCTGTTTTAGGTTGCTGATTTTAACGTATGAACAACCCATCTAAATCCTAGGATTGATGAACATGTCGGGATCAGTAACTCCACGGTAATTATAATTATGGGTCAAATAATTTACCTGGTTAGACCCTTTAGATGTAAAAAAAGTAAGATTAAAATTATGGGTTTTGTTCCTTTTTTGTGTTTTTTTTAACCCAATTGAGGATTTTTGTAGGGCAGCAATGGCCATTGGGGAATTATGATTCAAAACCCAGAAAAAGCTGCAGAGAAGCAAAGGAAAAAAGGGCTGTGTTTGAGTCCAATTTAGATGTAATTTTGAGCTCCCGAACTCAACTCAAACTCGCTATTATAATCTATAATTCTCTCGTTTCGTTCGTTAGTTTGAATTATTCGAGTAGTCAAGCTTTTTCTTTCACCCAATATCCAATACGAGATTCCTACTCACGAGCTAGTGTTTAGTCTTGTTCGTTATTTGATTCCTTTAACTGAAATCTAAATTCA

mRNA sequence

CACAAGCTCTCATCTCACGCTCTCAACATTCATTGAATGGACAAGAAGAACGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAAGCGGAGGAGAGTGGGTGGACGGAGTATCTGGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGCGGGAGCTGTAGTTGGGATATTTCAGAAGCCAATAAGGAAAAAATCAATGCTTTAACCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCCTCAAAAAAACAACAACTCAGACGATTTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTTAACGTATGAACAACCCATCTAAATCCTAGGATTGATGAACATGTCGGGATCAGTAACTCCACGGGCAGCAATGGCCATTGGGGAATTATGATTCAAAACCCAGAAAAAGCTGCAGAGAAGCAAAGGAAAAAAGGGCTGTGTTTGAGTCCAATTTAGATGTAATTTTGAGCTCCCGAACTCAACTCAAACTCGCTATTATAATCTATAATTCTCTCGTTTCGTTCGTTAGTTTGAATTATTCGAGTAGTCAAGCTTTTTCTTTCACCCAATATCCAATACGAGATTCCTACTCACGAGCTAGTGTTTAGTCTTGTTCGTTATTTGATTCCTTTAACTGAAATCTAAATTCA

Coding sequence (CDS)

ATGGACAAGAAGAACGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAAGCGGAGGAGAGTGGGTGGACGGAGTATCTGGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGCGGGAGCTGTAGTTGGGATATTTCAGAAGCCAATAAGGAAAAAATCAATGCTTTAACCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCCTCAAAAAAACAACAACTCAGACGATTTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTTAACGTATGA

Protein sequence

MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVADFNV

Homology

[Close]

BLAST of CmaCh11G018330 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.1e-05
Identity = 39/110 (35.45%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 21  GAEEAEESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINA 80
           G +  EESGWT YL+D+           ++ + KSS+   ++S S   D          A
Sbjct: 31  GGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSD----------A 90

Query: 81  LTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVADF 122
            T   S     ++ P KL   +  T+ I +DDSLEDTA+SPV +PKV+ F
Sbjct: 91  ATHAFSGKSFPVNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHF 130

[Close]

BLAST of CmaCh11G018330 vs. ExPASy TrEMBL
Match: A0A6J1JN61 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWD 60
           MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWD
Sbjct: 1   MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWD 60

Query: 61  ISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVAD 120
           ISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVAD
Sbjct: 61  ISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVAD 120

Query: 121 FNV 124
           FNV
Sbjct: 121 FNV 123

[Close]

BLAST of CmaCh11G018330 vs. ExPASy TrEMBL
Match: A0A6J1ESI7 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.7e-56
Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MDKKN---AGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSC 60
           MDKKN   AGVDPPPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSC
Sbjct: 1   MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSC 60

Query: 61  SWDISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPK 120
           SWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQ IFDDDSLEDTATSPVLTPK
Sbjct: 61  SWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATSPVLTPK 120

Query: 121 VADFNV 124
           VAD NV
Sbjct: 121 VADLNV 126

[Close]

BLAST of CmaCh11G018330 vs. ExPASy TrEMBL
Match: A0A6J1C2S1 (uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007924 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.1e-20
Identity = 73/128 (57.03%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 3   KKNAGVDPPPEKSSSAAT---GAEEAEESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCS 62
           +KN    P  E S++AA    G  E EESGWT+YLEDY   S+IER+ SFL CSS GSCS
Sbjct: 2   EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCS 61

Query: 63  WDISEANKEKINALTP-FCSVGEVILDAPNKLSL--KKTTTQTIFDDDSLEDTATSPVLT 122
            D         N L+P  CSVGEV LD+P KL    K T TQ IF DDSLEDTATSPV +
Sbjct: 62  DD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHS 121

Query: 123 PKVADFNV 124
           PKVAD  V
Sbjct: 122 PKVADLKV 124

[Close]

BLAST of CmaCh11G018330 vs. ExPASy TrEMBL
Match: A0A1S3C0F7 (uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-17
Identity = 71/125 (56.80%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 9   DPPPEKSSSAATGAEEAEESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WD----IS 68
           D PPE SS+A  GAEE EESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD    IS
Sbjct: 17  DSPPENSSAA--GAEEQEESGWTDYLEDYFNSELVERESSFL-CSSIGSCSNWDDLNNIS 76

Query: 69  EANKEKINALTPFCSVGEVILD---APNKLSLKKTTTQTIF-DDDSLEDTATSPVLTPKV 124
             N +    +    +VG V  D     N L+ KKT TQ IF DDDSL+DTATSP+ +PKV
Sbjct: 77  YPNYD----INYNINVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKV 134

[Close]

BLAST of CmaCh11G018330 vs. ExPASy TrEMBL
Match: A0A0A0K3L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 9   DPPPEKSSSAATGAEEAEESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANK 68
           D  PE SS  A   EE EESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD      
Sbjct: 13  DSLPENSS--AVRDEEQEESGWTDYLEDYFNSEFVERESSFL-CSSIGSCSNWDDRNNIS 72

Query: 69  EKINALTPFCSVGEVILD---APNKLSLKKTTTQTIF-DDDSLEDTATSPVLTPKVADFN 124
                +    ++G V  D     N L+ KKT TQ IF DDDSL+DTATSP+ +PKV D  
Sbjct: 73  YPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLK 130

[Close]

BLAST of CmaCh11G018330 vs. NCBI nr
Match: XP_022989009.1 (vascular-related unknown protein 1-like [Cucurbita maxima] >XP_022989010.1 vascular-related unknown protein 1-like [Cucurbita maxima])

HSP 1 Score: 245.4 bits (625), Expect = 2.6e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWD 60
           MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWD
Sbjct: 1   MDKKNAGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWD 60

Query: 61  ISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVAD 120
           ISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVAD
Sbjct: 61  ISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVAD 120

Query: 121 FNV 124
           FNV
Sbjct: 121 FNV 123

[Close]

BLAST of CmaCh11G018330 vs. NCBI nr
Match: XP_022930798.1 (vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vascular-related unknown protein 1-like [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 9.7e-56
Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MDKKN---AGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSC 60
           MDKKN   AGVDPPPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSC
Sbjct: 1   MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSC 60

Query: 61  SWDISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPK 120
           SWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQ IFDDDSLEDTATSPVLTPK
Sbjct: 61  SWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATSPVLTPK 120

Query: 121 VADFNV 124
           VAD NV
Sbjct: 121 VADLNV 126

[Close]

BLAST of CmaCh11G018330 vs. NCBI nr
Match: KAG6589172.1 (Vascular-related unknown protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022874.1 hypothetical protein SDJN02_16610 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 115/126 (91.27%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MDKKN---AGVDPPPEKSSSAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCSSSGSC 60
           MDKKN   AGVD PPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSC
Sbjct: 1   MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSC 60

Query: 61  SWDISEANKEKINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPK 120
           SWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQT FDDDSLEDTATSPVLTPK
Sbjct: 61  SWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATSPVLTPK 120

Query: 121 VADFNV 124
           VAD NV
Sbjct: 121 VADLNV 126

[Close]

BLAST of CmaCh11G018330 vs. NCBI nr
Match: XP_038888852.1 (vascular-related unknown protein 1-like [Benincasa hispida])

HSP 1 Score: 114.0 bits (284), Expect = 9.2e-22
Identity = 75/133 (56.39%), Postives = 89/133 (66.92%), Query Frame = 0


Query: 1   MDKKNA---GVDPPPEKSS-----SAATGAEEAEESGWTEYLEDYLWSEIERKSSFLCCS 60
           M+K NA   G D PPE SS     +AA GAEE EESGWT+YLEDY  SE    SS+L CS
Sbjct: 1   MEKNNATAEGSDSPPENSSTSSSAAAAAGAEEQEESGWTDYLEDYFSSE----SSYL-CS 60

Query: 61  SSGSCS-WDISEANKE-KINALTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTAT 120
           S GSCS WD + +N    IN       +G++I D PNKL+ KKT TQ IF+DDSL+DTAT
Sbjct: 61  SIGSCSNWDHNISNPNYDINKTN---HIGKMIFDVPNKLTFKKTRTQKIFEDDSLQDTAT 120

Query: 121 SPVLTPKVADFNV 124
           SP+ +PKVAD  V
Sbjct: 121 SPIHSPKVADLKV 125

[Close]

BLAST of CmaCh11G018330 vs. NCBI nr
Match: XP_022136166.1 (uncharacterized protein LOC111007924 [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19
Identity = 73/128 (57.03%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 3   KKNAGVDPPPEKSSSAAT---GAEEAEESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCS 62
           +KN    P  E S++AA    G  E EESGWT+YLEDY   S+IER+ SFL CSS GSCS
Sbjct: 2   EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCS 61

Query: 63  WDISEANKEKINALTP-FCSVGEVILDAPNKLSL--KKTTTQTIFDDDSLEDTATSPVLT 122
            D         N L+P  CSVGEV LD+P KL    K T TQ IF DDSLEDTATSPV +
Sbjct: 62  DD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHS 121

Query: 123 PKVADFNV 124
           PKVAD  V
Sbjct: 122 PKVADLKV 124

[Close]

BLAST of CmaCh11G018330 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06
Identity = 39/110 (35.45%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 21  GAEEAEESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINA 80
           G +  EESGWT YL+D+           ++ + KSS+   ++S S   D          A
Sbjct: 31  GGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSD----------A 90

Query: 81  LTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVADF 122
            T   S     ++ P KL   +  T+ I +DDSLEDTA+SPV +PKV+ F
Sbjct: 91  ATHAFSGKSFPVNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHF 130

[Close]

BLAST of CmaCh11G018330 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06
Identity = 39/110 (35.45%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 21  GAEEAEESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINA 80
           G +  EESGWT YL+D+           ++ + KSS+   ++S S   D          A
Sbjct: 31  GGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSD----------A 90

Query: 81  LTPFCSVGEVILDAPNKLSLKKTTTQTIFDDDSLEDTATSPVLTPKVADF 122
            T   S     ++ P KL   +  T+ I +DDSLEDTA+SPV +PKV+ F
Sbjct: 91  ATHAFSGKSFPVNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHF 130

The following BLAST results are available for this feature:

BLAST of CmaCh11G018330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSZ3	2.1e-05	35.45	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]

BLAST of CmaCh11G018330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JN61	1.3e-61	100.00	Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1	[more]
A0A6J1ESI7	4.7e-56	92.06	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1	[more]
A0A6J1C2S1	7.1e-20	57.03	uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A1S3C0F7	2.5e-17	56.80	uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=...	[more]
A0A0A0K3L1	1.5e-14	52.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1	[more]

BLAST of CmaCh11G018330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989009.1	2.6e-61	100.00	vascular-related unknown protein 1-like [Cucurbita maxima] >XP_022989010.1 vascu...	[more]
XP_022930798.1	9.7e-56	92.06	vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vas...	[more]
KAG6589172.1	1.1e-54	91.27	Vascular-related unknown protein 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_038888852.1	9.2e-22	56.39	vascular-related unknown protein 1-like [Benincasa hispida]	[more]
XP_022136166.1	1.5e-19	57.03	uncharacterized protein LOC111007924 [Momordica charantia]	[more]

BLAST of CmaCh11G018330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21710.1	1.5e-06	35.45	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G21710.2	1.5e-06	35.45	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 15..122
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 15..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G018330.1	CmaCh11G018330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development