CmaCh11G018050 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G018050
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionhomeobox protein knotted-1-like LET6
LocationCma_Chr11: 12078928 .. 12082505 (+)
RNA-Seq ExpressionCmaCh11G018050
SyntenyCmaCh11G018050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAGAGAGGTGTGTCTCCTCCAATAGCTCACAAAATGCCTTTATTCCCATCAATCTCACCACTTCTGGTTATCCATTTTGATCGCCCCTTCATCCCTCCACTCACTCCTTTCCCTTCTCCTCCTATTCCTCTCTCTAAATCCCAGTCAGAAACAATAAAACAAAATTAACTCACACCCATGGTGCATTGAACGAGGTTCCATTCCACTTCTCCATCTCCTTGGAAACCCAACAATAAAGGGTTCATAGGGTTTGTTCCTATCACTGTTTTTGTGTAGCGATTGACATCTGCCCGTGTGACAATAACCCCAAGTACGACCAAAAACACCCTCTTTTACTGTGTCTCTTAAGCTTAAATAGCGGGTGAAAAGGTTAGCCAGACCATCATGGACCGAGGCTTGATCATGTTCGATCATAACAACAACAACGACAGCGATAGCAACAACAAGAAGATGTTTCTGCCTTACAATGATCATGTTCAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGATTGTGTTTTGGATTGTGTTTTGTTGTTCATGATTTTATGTGGGGTTTTTTGTTGGGGTTTTCAGGTGGGTGCACCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTTTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTACTCTCTCTCTCTCTCTCTCTCTCTATTCTAATCATGTTTTATTTATGTTCTTTGTTTTGTTCGATTATTGTGATTAATGCGAGATCTTACGTCAATTGGGTATGAAATGAAACATACGGTGTGGAAAACTAGACTTGCGAGGAAAGCCCGAAAGGGAAAGTTCAAAAAGAAACTTCTTACTATACGTTTTAAAAACCTAGAGGGGAAGGTGTGGGAAGCCTTTTGTTAGATTATTACAATTAATGTGAGATCTCACGTGAGTGGGGAGGAGGGTGTGGAAACCTTTTCTTAATCTTGAGGAGAAGCTTGAAAGAGAGAGTTCAAAAAGAAACTTCTTATTATTAAGACGCGTTTTAAAGACTTTGAGGGGAAGCCTGAAAGCCTTTTGTTAGATTATTATGATTAATGTGAAATCGTGGGAAAGGAAAATAAAACATTCTTCATAAGAGTGTTGAAAATCGCGAGAAAAAGTTTGAAAGGGAAAGTTTAGACAGAAACCTATTTCTATCGGATGCATTTGAAAACTTCGAGGAGAAGTTCGGGAGCCTTTAGTTAGATTATTATGATTAAGGTGAGATTCATATGAGGACTAAATACTGTTGTTTAGCTCAGAAACCCTAAACCCTTGAGCCTTTTAGGTTCATTGCACATCAAATCAGCTCAGAAATGAGTACTGGTCAGCTGGGTTTTTTTTTTTTAAATTTTGTTTAACATTAATTTGTATATAAATACGATGTTTTTTATTGCAACCATTTTAAGGTTATCCTTTGAAGTTAATTGGTCGTGTAAGTGTAGAAGGTTGCCTTAAAGACTTGAAAAACCAAACATGCATTTCTAGGTTAATGCTAAATCTGTTTATGTCTGAATAGGATCCAAGCTTTTCAGGTTGGGTTTGCTTCATCTCCTTACTTTGAATGGTAAAGGAAATGCTTTTTAACCATGGTTAGAGGGTTTTGGGATTCGAACCTAAACGAATACATGTCTTAACCATAGCTATGGTAGCGTGAGCTTTCGAAATTTTTTTTAATGGGTTACAAGTTTTAATCTCTTGGATCCCTAAACTTTGTCGAAAGTTCTAATTTAGCACATACATTTTAGTCCCTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACTATTTAACTTCTAAACTTTAGTGTAAGAAAAAAATTAGTTCGAAAACTTTAGAATTTGTACAATTTTAATCTAAATTAAGTGTTAAAAGTCTTATTAATTAGTTTTTACACATTGAAGTTCAAGAACTAAACAGATAACGATGAATATTTTGGAACATCTTTTTTGAATTATACATCGAATTTGATAACTTCATGTTCGTAATAACACCATTGTAAGTTTGGTTCTTGACTCAATATAGATATGTCTTTAGCTTGGTTTCAACTCTATAAAGTGAGAAATGAGATGAATTTCTCCTTTAAATGATTCTATCTTTTGAATATTAATTCCATCCCATGAAGAAAGTTAGGCCTCAAGATGTGGCCCAATGTTTAATTTATTGGTTCTTTTTATGATAGTTTATGTTTGAAAGATGATATGAATCTTGATTTTTGTGTTAATTTTCAAGTCTAGACGATTCAGGATTGTTGGGAGTGAGTCCTACGATGAATAATTTAGGGAATGATTATGGGTTTATAAGTAACGGAATACATTTTCATTGGTACGAAGCCTTTCGAGAATTCCTAAAACAAAGCCTTGAGAGCATATGTTCAAATTAGACAATATTAGATCATTGTGACTCTAACTAGCTTAATGTTGGTGCTAGGTTATGAGTTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTCGTTGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAGGGCCAACTTCTACGCAAGTACAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTTAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGTATGTCATTTGACATTGTAAAATTGATATGACTGCTATGAATGATCCGATACGACACTAATGGCAGTGAAACTGTGGTTGGTTGAGCGCAGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGGCTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCTATGGACTGTTCTTCCACTCTCTTCTGATTACATATCATTTTAATGTTGGTGGTTTGTTTATGTTCTAAGTCATTTCCATTTTGTTTTGAATTGTTCTACATGTTGAACTCAAACCCTTTCTTTGTTTCTTCCTTCTTGATTCTTGGTCTAGGGTTCTTGTATTGTATGCGTTTGTTTTAGTACTAATTTAGCTCGGTTCACATTATTTAACTTTTCGAAGTTTTTTTTTTTTTAAAGTACAATGGAAAATCTCGTTCCTTGATTATCTGTAGTGCTCTATGTCTAAGATTTGGATTCGATATTTGTGTTCTCTTAACATTCATTTCCA

mRNA sequence

CACAGAGAGGTGTGTCTCCTCCAATAGCTCACAAAATGCCTTTATTCCCATCAATCTCACCACTTCTGGTTATCCATTTTGATCGCCCCTTCATCCCTCCACTCACTCCTTTCCCTTCTCCTCCTATTCCTCTCTCTAAATCCCAGTCAGAAACAATAAAACAAAATTAACTCACACCCATGGTGCATTGAACGAGGTTCCATTCCACTTCTCCATCTCCTTGGAAACCCAACAATAAAGGGTTCATAGGGTTTGTTCCTATCACTGTTTTTGTGTAGCGATTGACATCTGCCCGTGTGACAATAACCCCAAGTACGACCAAAAACACCCTCTTTTACTGTGTCTCTTAAGCTTAAATAGCGGGTGAAAAGGTTAGCCAGACCATCATGGACCGAGGCTTGATCATGTTCGATCATAACAACAACAACGACAGCGATAGCAACAACAAGAAGATGTTTCTGCCTTACAATGATCATGTTCAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGTGCACCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTTTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTATGAGTTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTCGTTGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAGGGCCAACTTCTACGCAAGTACAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTTAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGGCTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCTATGGACTGTTCTTCCACTCTCTTCTGATTACATATCATTTTAATGTTGGTGGTTTGTTTATGTTCTAAGTCATTTCCATTTTGTTTTGAATTGTTCTACATGTTGAACTCAAACCCTTTCTTTGTTTCTTCCTTCTTGATTCTTGGTCTAGGGTTCTTGTATTGTATGCGTTTGTTTTAGTACTAATTTAGCTCGGTTCACATTATTTAACTTTTCGAAGTTTTTTTTTTTTTAAAGTACAATGGAAAATCTCGTTCCTTGATTATCTGTAGTGCTCTATGTCTAAGATTTGGATTCGATATTTGTGTTCTCTTAACATTCATTTCCA

Coding sequence (CDS)

ATGGACCGAGGCTTGATCATGTTCGATCATAACAACAACAACGACAGCGATAGCAACAACAAGAAGATGTTTCTGCCTTACAATGATCATGTTCAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGTGCACCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTTTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTATGAGTTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTCGTTGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAGGGCCAACTTCTACGCAAGTACAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTTAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGGCTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCTATGGACTGTTCTTCCACTCTCTTCTGA

Protein sequence

MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Homology
[Close]
BLAST of CmaCh11G018050 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 372.5 bits (955), Expect = 4.4e-102
Identity = 188/260 (72.31%), Postives = 214/260 (82.31%), Query Frame = 0 

Query: 35  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLD 94
           +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC+ AA        T   G+DPGLD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLD 181

Query: 95  QFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSS-DGY--ELVGQNECS 154
           QFMEAYCEML KYEQEL+KPFKEAMVF  R+E Q K+L+ SS SS  GY    + +N   
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNG 241

Query: 155 KEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLD 214
              E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLD
Sbjct: 242 SSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 301

Query: 215 WWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-H 274
           WWSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP H
Sbjct: 302 WWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHH 361

Query: 275 YYLDNLICNPFSMD-CSSTL 286
           Y++DN++ NPF MD  SST+
Sbjct: 362 YFMDNVLGNPFPMDHISSTM 381

[Close]
BLAST of CmaCh11G018050 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.2e-101
Identity = 188/295 (63.73%), Postives = 223/295 (75.59%), Query Frame = 0 

Query: 11  NNNNDSDSNNKKMFLPY-------------NDHVQTCRAKLMAHPLFPRLLASYVNCQKV 70
           NNNN   SNN  +FLP+             N    + ++K+MAHP + RLL +Y+NCQK+
Sbjct: 60  NNNNAETSNNNILFLPFMDNNNNNNPQEDNNSSSSSIKSKIMAHPHYHRLLTAYLNCQKI 119

Query: 71  GAPPDVVARLEQACTVAAGNCRTVAR------GDDPGLDQFMEAYCEMLSKYEQELTKPF 130
           GAPP+VVARLE+ C  +A   R+ +       G+DP LDQFMEAYCEML+KYEQEL+KPF
Sbjct: 120 GAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEMLTKYEQELSKPF 179

Query: 131 KEAMVFFSRIESQLKALAASSSSSDGYEL-VGQNECSKEIEVVDMNENYIDPQAEEKELK 190
           KEAMVF SRIE Q KAL  + +SS    L    +      E VD+N ++IDPQAE++ELK
Sbjct: 180 KEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSFIDPQAEDRELK 239

Query: 191 GQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAEST 250
           GQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQL+DWW RH KWPYPSESQK+ALAEST
Sbjct: 240 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAEST 299

Query: 251 GLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTL 286
           GLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DN++ N F MD + +L
Sbjct: 300 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLANHFPMDMTPSL 354

[Close]
BLAST of CmaCh11G018050 vs. ExPASy Swiss-Prot
Match: Q9M6D9 (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 4.5e-99
Identity = 179/253 (70.75%), Postives = 206/253 (81.42%), Query Frame = 0 

Query: 35  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLD 94
           +AK+MAHP + RLL +YVNCQKVGAPP+V ARLE+ C+ AA        T + G+DPGLD
Sbjct: 124 KAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGEDPGLD 183

Query: 95  QFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGY--ELVGQNECSK 154
           QFMEAYCEML KYEQEL+KPFKEAMVF   +E Q K+L+ SS SS GY    + +N    
Sbjct: 184 QFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAIERNNNGS 243

Query: 155 EIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDW 214
             E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDW
Sbjct: 244 SEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 303

Query: 215 WSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HY 274
           WSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP HY
Sbjct: 304 WSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPLHY 363

Query: 275 YLDNLICNPFSMD 281
           ++ N++ NPF +D
Sbjct: 364 FMGNVLGNPFPID 376

[Close]
BLAST of CmaCh11G018050 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.0e-98
Identity = 188/282 (66.67%), Postives = 222/282 (78.72%), Query Frame = 0 

Query: 10  HNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQ 69
           +NNNN S S++              +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+
Sbjct: 109 NNNNNGSSSSSSS---------SAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEE 168

Query: 70  AC----TVAAGNCRTVAR--GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIES 129
           AC    T+A G+    +   G+DP LDQFMEAYCEML+KYEQEL+KP KEAM+F  RIE 
Sbjct: 169 ACASAATMAGGDAAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIEC 228

Query: 130 QLKALAASSS---SSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 189
           Q K L  SSS   S++G +  G +E     E VD++ N IDPQAE+++LKGQLLRKYSGY
Sbjct: 229 QFKNLTISSSDFASNEGGDRNGSSE-----EDVDLH-NMIDPQAEDRDLKGQLLRKYSGY 288

Query: 190 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 249
           LGSLKQEF+KK+K GKLPKEARQQLL+WW+RHYKWPYPSESQK+ALAESTGLD KQINNW
Sbjct: 289 LGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNW 348

Query: 250 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCS 283
           FINQRKRHWKPSEDMQFVVMD +HPHYY+DN++ NPF MD S
Sbjct: 349 FINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLGNPFPMDLS 375

[Close]
BLAST of CmaCh11G018050 vs. ExPASy Swiss-Prot
Match: O65034 (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH15 PE=2 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-74
Identity = 149/262 (56.87%), Postives = 181/262 (69.08%), Query Frame = 0 

Query: 32  QTCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGD--DPGL 91
           ++ +AK+MAHP +  LLA+Y++CQKVGAPP+V+ RL    T A  + R   R D  DP L
Sbjct: 89  ESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERL--TATAAKLDARPPGRHDARDPEL 148

Query: 92  DQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSS----------SDG-Y 151
           DQFMEAYC ML+KY +ELT+P  EAM F  R+ESQL  +A  +            +DG  
Sbjct: 149 DQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLLLADGKS 208

Query: 152 ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLP 211
           E VG +E   +    +     IDP+AE+KELK QLL+KYSGYL SL+QEF KKKK GKLP
Sbjct: 209 ECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLP 268

Query: 212 KEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFV 271
           KEARQ+LL WW  HYKWPYPSE++K+ALAESTGLD KQINNWFINQRKRHWKPSEDM FV
Sbjct: 269 KEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFV 328

Query: 272 VMDAAHPHYYLDNLICNPFSMD 281
           +M+  HP       +  PF  D
Sbjct: 329 MMEGFHPQNAAALYMDGPFMAD 348

[Close]
BLAST of CmaCh11G018050 vs. ExPASy TrEMBL
Match: A0A6J1JKT8 (homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111486097 PE=3 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.4e-164
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 

Query: 1   MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP 60
           MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP
Sbjct: 1   MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP 60

Query: 61  PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 120
           PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR
Sbjct: 61  PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 120

Query: 121 IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 180
           IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY
Sbjct: 121 IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 180

Query: 181 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 240
           LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW
Sbjct: 181 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 240

Query: 241 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 286

[Close]
BLAST of CmaCh11G018050 vs. ExPASy TrEMBL
Match: A0A6J1ERR4 (homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC111437123 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.5e-161
Identity = 284/288 (98.61%), Postives = 285/288 (98.96%), Query Frame = 0 

Query: 1   MDRGLIMFDHN--NNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVG 60
           MDRGLIMFDHN  NNNDSDSNNKKMFLPYNDHVQ+CR KLMAHPLFPRLLASYVNCQKVG
Sbjct: 1   MDRGLIMFDHNNDNNNDSDSNNKKMFLPYNDHVQSCRDKLMAHPLFPRLLASYVNCQKVG 60

Query: 61  APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF 120
           APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF
Sbjct: 61  APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF 120

Query: 121 SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS 180
           SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS
Sbjct: 121 SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS 180

Query: 181 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 240
           GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN
Sbjct: 181 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 240

Query: 241 NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 288

[Close]
BLAST of CmaCh11G018050 vs. ExPASy TrEMBL
Match: A0A6J1C313 (homeobox protein SBH1-like OS=Momordica charantia OX=3673 GN=LOC111008000 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.7e-131
Identity = 242/301 (80.40%), Postives = 259/301 (86.05%), Query Frame = 0 

Query: 7   MFDHNNNN-------------DSDSNNKKMFLPYNDH-------VQTCRAKLMAHPLFPR 66
           + D+NNNN              S +     F+P   H         +CRAK+MAHPLFPR
Sbjct: 47  ILDNNNNNVNNKLFVPLSWSATSTAQRVSAFVPQPPHNNSNHNLQNSCRAKIMAHPLFPR 106

Query: 67  LLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQE 126
           LLA+YVNCQKVGAPP+VVARLEQAC VA G+CR  ARGDDP LDQFMEAYCEMLSKYEQE
Sbjct: 107 LLAAYVNCQKVGAPPEVVARLEQACAVAGGSCRATARGDDPALDQFMEAYCEMLSKYEQE 166

Query: 127 LTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEE 186
           L+KPFKEAM+FFSRIESQLKALA SSS+SDG ELVGQ+ECSKE+E VDMNENYIDPQAEE
Sbjct: 167 LSKPFKEAMLFFSRIESQLKALAVSSSTSDGCELVGQSECSKEVE-VDMNENYIDPQAEE 226

Query: 187 KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 246
           KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQ+LLDWWSRHYKWPYPSE+QKVAL
Sbjct: 227 KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQELLDWWSRHYKWPYPSEAQKVAL 286

Query: 247 AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC-NPFSMDCSSTL 287
           AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDN+IC NPFSMDCSSTL
Sbjct: 287 AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNNPFSMDCSSTL 346

[Close]
BLAST of CmaCh11G018050 vs. ExPASy TrEMBL
Match: A0A0A0K5G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041370 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.4e-127
Identity = 234/286 (81.82%), Postives = 248/286 (86.71%), Query Frame = 0 

Query: 9   DHNNNNDSDSNNKKMFLPY------NDHV----QTCRAKLMAHPLFPRLLASYVNCQKVG 68
           ++NNNN         FLP       NDHV     T +AK+MAHPLFPRLL +YVNCQKVG
Sbjct: 63  NNNNNNVQTQTPLSAFLPQPHTNNSNDHVVPPTSTSKAKIMAHPLFPRLLTAYVNCQKVG 122

Query: 69  APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF 128
           APP+VVARLEQAC VA G+CR    G+DP LDQFMEAYCEML+KYEQELTKPFKEAM+FF
Sbjct: 123 APPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFF 182

Query: 129 SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS 188
           SRIESQLKA A    SSDG+ELVGQNECSKEIE VDMNENYIDPQAE KELKGQLLRKYS
Sbjct: 183 SRIESQLKAEAV---SSDGFELVGQNECSKEIE-VDMNENYIDPQAEVKELKGQLLRKYS 242

Query: 189 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 248
           GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN
Sbjct: 243 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 302

Query: 249 NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSST 285
           NWFINQRKRHWKP+EDMQFVVMDA HPHYYLDN+ICNPFSMDCSS+
Sbjct: 303 NWFINQRKRHWKPTEDMQFVVMDAGHPHYYLDNVICNPFSMDCSSS 344

[Close]
BLAST of CmaCh11G018050 vs. ExPASy TrEMBL
Match: A0A1S3C0Z5 (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103495627 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.2e-125
Identity = 230/288 (79.86%), Postives = 246/288 (85.42%), Query Frame = 0 

Query: 9   DHNNNNDSDSNNKKMFLPY------NDH----VQTCRAKLMAHPLFPRLLASYVNCQKVG 68
           ++NNNN         FLP       NDH      T +AK+MAHPLFPRLL +YVNCQKVG
Sbjct: 63  NNNNNNVQTQTPLSTFLPQPHTNNSNDHDAPPTSTSKAKIMAHPLFPRLLTAYVNCQKVG 122

Query: 69  APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF 128
           APP+VVARLEQAC VA G+CR    G+DP LDQFMEAYCEML+KYEQELTKPFKEAM+FF
Sbjct: 123 APPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFF 182

Query: 129 SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS 188
           SRIESQLKA A    SSDG++LV QN+CSKEIE VDMNENYIDPQAE KELKGQLLRKYS
Sbjct: 183 SRIESQLKAQAV---SSDGFDLVAQNDCSKEIE-VDMNENYIDPQAEVKELKGQLLRKYS 242

Query: 189 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 248
           GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN
Sbjct: 243 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 302

Query: 249 NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           NWFINQRKRHWKP+EDMQFVVMD  HPHYYLDN+ICNPFSMDCSS+ F
Sbjct: 303 NWFINQRKRHWKPTEDMQFVVMDTGHPHYYLDNVICNPFSMDCSSSHF 346

[Close]
BLAST of CmaCh11G018050 vs. NCBI nr
Match: XP_022988875.1 (homeobox protein knotted-1-like LET6 [Cucurbita maxima])

HSP 1 Score: 586.6 bits (1511), Expect = 1.1e-163
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 

Query: 1   MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP 60
           MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP
Sbjct: 1   MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP 60

Query: 61  PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 120
           PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR
Sbjct: 61  PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 120

Query: 121 IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 180
           IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY
Sbjct: 121 IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 180

Query: 181 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 240
           LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW
Sbjct: 181 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 240

Query: 241 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 286

[Close]
BLAST of CmaCh11G018050 vs. NCBI nr
Match: KAG6589145.1 (Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 584.3 bits (1505), Expect = 5.6e-163
Identity = 284/286 (99.30%), Postives = 286/286 (100.00%), Query Frame = 0 

Query: 1   MDRGLIMFDHNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAP 60
           MDRGLIMFDHNNNNDSDSNN+KMFLPYNDHV+TCRAKLMAHPLFPRLLASYVNCQKVGAP
Sbjct: 1   MDRGLIMFDHNNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAP 60

Query: 61  PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 120
           PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR
Sbjct: 61  PDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSR 120

Query: 121 IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 180
           IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY
Sbjct: 121 IESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGY 180

Query: 181 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 240
           LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW
Sbjct: 181 LGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNW 240

Query: 241 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 FINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 286

[Close]
BLAST of CmaCh11G018050 vs. NCBI nr
Match: KAG7022846.1 (Homeobox protein SBH1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 578.6 bits (1490), Expect = 3.1e-161
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 0 

Query: 1   MDRGLIMFDHN----NNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQK 60
           MDRGLIMFDHN    NNNDSDSNN+KMFLPYNDHV+TCRAKLMAHPLFPRLLASYVNCQK
Sbjct: 1   MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQK 60

Query: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120
           VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV
Sbjct: 61  VGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMV 120

Query: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180
           FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK
Sbjct: 121 FFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRK 180

Query: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240
           YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ
Sbjct: 181 YSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQ 240

Query: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 INNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 290

[Close]
BLAST of CmaCh11G018050 vs. NCBI nr
Match: XP_022930731.1 (homeobox protein knotted-1-like LET6 [Cucurbita moschata])

HSP 1 Score: 577.8 bits (1488), Expect = 5.2e-161
Identity = 284/288 (98.61%), Postives = 285/288 (98.96%), Query Frame = 0 

Query: 1   MDRGLIMFDHN--NNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVG 60
           MDRGLIMFDHN  NNNDSDSNNKKMFLPYNDHVQ+CR KLMAHPLFPRLLASYVNCQKVG
Sbjct: 1   MDRGLIMFDHNNDNNNDSDSNNKKMFLPYNDHVQSCRDKLMAHPLFPRLLASYVNCQKVG 60

Query: 61  APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF 120
           APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF
Sbjct: 61  APPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFF 120

Query: 121 SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS 180
           SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS
Sbjct: 121 SRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYS 180

Query: 181 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 240
           GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN
Sbjct: 181 GYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQIN 240

Query: 241 NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 NWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 288

[Close]
BLAST of CmaCh11G018050 vs. NCBI nr
Match: XP_023529301.1 (homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.0 bits (1473), Expect = 2.9e-159
Identity = 282/291 (96.91%), Postives = 283/291 (97.25%), Query Frame = 0 

Query: 1   MDRGLIMFDHN-----NNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQ 60
           MDRGLIMFDHN     NNNDSDSNNKKMFLPYNDH Q+CRAKLMAHPLFPRLLASYVNCQ
Sbjct: 1   MDRGLIMFDHNNNDDDNNNDSDSNNKKMFLPYNDHGQSCRAKLMAHPLFPRLLASYVNCQ 60

Query: 61  KVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAM 120
           KVGAPPDVVARLEQACTVAAGNCRTV RGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAM
Sbjct: 61  KVGAPPDVVARLEQACTVAAGNCRTVGRGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAM 120

Query: 121 VFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLR 180
           VFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLR
Sbjct: 121 VFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLR 180

Query: 181 KYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLK 240
           KYSGYL SLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLK
Sbjct: 181 KYSGYLDSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLK 240

Query: 241 QINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 287
           QINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Sbjct: 241 QINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF 291

[Close]
BLAST of CmaCh11G018050 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-103
Identity = 188/260 (72.31%), Postives = 214/260 (82.31%), Query Frame = 0 

Query: 35  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLD 94
           +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC+ AA        T   G+DPGLD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLD 181

Query: 95  QFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSS-DGY--ELVGQNECS 154
           QFMEAYCEML KYEQEL+KPFKEAMVF  R+E Q K+L+ SS SS  GY    + +N   
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNG 241

Query: 155 KEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLD 214
              E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLD
Sbjct: 242 SSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 301

Query: 215 WWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-H 274
           WWSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP H
Sbjct: 302 WWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHH 361

Query: 275 YYLDNLICNPFSMD-CSSTL 286
           Y++DN++ NPF MD  SST+
Sbjct: 362 YFMDNVLGNPFPMDHISSTM 381

[Close]
BLAST of CmaCh11G018050 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 274.6 bits (701), Expect = 8.8e-74
Identity = 153/281 (54.45%), Postives = 184/281 (65.48%), Query Frame = 0 

Query: 10  HNNNNDSDSNNKKMFLPYNDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQ 69
           +NNNND+ S+           V+  +AK++AHP +  LL +Y++CQK+GAPPDVV R+  
Sbjct: 121 NNNNNDNVSD-----------VEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITA 180

Query: 70  A-----CTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQ 129
           A                A   DP LDQFMEAYC+ML KY +ELT+P +EAM F  RIESQ
Sbjct: 181 ARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQ 240

Query: 130 LKALAAS-----------SSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQL 189
           L  L  S           S +    +   +N    E E+ +     IDP+AE++ELK  L
Sbjct: 241 LSMLCQSPIHILNNPDGKSDNMGSSDEEQENNSGGETELPE-----IDPRAEDRELKNHL 300

Query: 190 LRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLD 249
           L+KYSGYL SLKQE  KKKK GKLPKEARQ+LL WW  HYKWPYPSES+KVALAESTGLD
Sbjct: 301 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLD 360

Query: 250 LKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPHY---YLD 271
            KQINNWFINQRKRHWKPSEDMQF+VMD   HPH+   Y+D
Sbjct: 361 QKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMD 385

[Close]
BLAST of CmaCh11G018050 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 232.6 bits (592), Expect = 3.8e-61
Identity = 120/253 (47.43%), Postives = 164/253 (64.82%), Query Frame = 0 

Query: 28  NDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQ--------ACTVAAGNCR 87
           N  +   +AK+  HP +PRLL +Y++CQKVGAPP++   LE+           V   +C 
Sbjct: 79  NVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSC- 138

Query: 88  TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYE 147
               G DP LD+FME YC++L KY+ +L +PF EA  F ++IE QL+ L     S+ G  
Sbjct: 139 ---FGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVS 198

Query: 148 LVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKL 207
             G     +E+   D +E   D   + E+++LK +LLRK+   + +LK EF KKKK GKL
Sbjct: 199 EDGVISSDEELSGGD-HEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKL 258

Query: 208 PKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQF 267
           P+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLD KQINNWFINQRKRHWKPSE+M F
Sbjct: 259 PREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPF 318

Query: 268 VVMDAAHPHYYLD 271
            +MD +   ++ +
Sbjct: 319 AMMDDSSGSFFTE 326

[Close]
BLAST of CmaCh11G018050 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 232.3 bits (591), Expect = 5.0e-61
Identity = 118/248 (47.58%), Postives = 165/248 (66.53%), Query Frame = 0 

Query: 28  NDHVQTCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVAR---- 87
           N  +   ++K+ +HPL+PRLL +Y++CQKVGAP ++   LE+         R VA     
Sbjct: 63  NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCF 122

Query: 88  GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQ 147
           G DP LD+FME YC++L KY+ +L +PF EA  F ++IE QL+ L    +S+      G 
Sbjct: 123 GADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDGA 182

Query: 148 NECSKEI-EVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEAR 207
               +E+ E  D+  +    ++ +++LK QLLRK+  ++ SLK EF KKKK GKLP+EAR
Sbjct: 183 VSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREAR 242

Query: 208 QQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA 267
           Q LLDWW+ H KWPYP+E  K++LAE TGLD KQINNWFINQRKRHWKPSE+M F +MD 
Sbjct: 243 QALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDD 302

Query: 268 AHPHYYLD 271
           ++  ++ +
Sbjct: 303 SNETFFTE 310

[Close]
BLAST of CmaCh11G018050 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-59
Identity = 120/255 (47.06%), Postives = 164/255 (64.31%), Query Frame = 0 

Query: 28  NDHVQTCRAKLMAHPLFPRLLASYVNCQK--VGAPPDVVARLEQ--------ACTVAAGN 87
           N  +   +AK+  HP +PRLL +Y++CQK  VGAPP++   LE+           V   +
Sbjct: 79  NVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSS 138

Query: 88  CRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDG 147
           C     G DP LD+FME YC++L KY+ +L +PF EA  F ++IE QL+ L     S+ G
Sbjct: 139 C----FGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARG 198

Query: 148 YELVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNG 207
               G     +E+   D +E   D   + E+++LK +LLRK+   + +LK EF KKKK G
Sbjct: 199 VSEDGVISSDEELSGGD-HEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKG 258

Query: 208 KLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDM 267
           KLP+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLD KQINNWFINQRKRHWKPSE+M
Sbjct: 259 KLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENM 318

Query: 268 QFVVMDAAHPHYYLD 271
            F +MD +   ++ +
Sbjct: 319 PFAMMDDSSGSFFTE 328

The following BLAST results are available for this feature:
BLAST of CmaCh11G018050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q388744.4e-10272.31Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ... [more]
O222992.2e-10163.73Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=... [more]
Q9M6D94.5e-9970.75Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=... [more]
P466081.0e-9866.67Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1[more]
O650341.0e-7456.87Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH... [more]
BLAST of CmaCh11G018050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JKT85.4e-164100.00homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111486097... [more]
A0A6J1ERR42.5e-16198.61homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC1114371... [more]
A0A6J1C3132.7e-13180.40homeobox protein SBH1-like OS=Momordica charantia OX=3673 GN=LOC111008000 PE=3 S... [more]
A0A0A0K5G52.4e-12781.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041370 PE=3 SV=1[more]
A0A1S3C0Z52.2e-12579.86homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103495627 PE=... [more]
BLAST of CmaCh11G018050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988875.11.1e-163100.00homeobox protein knotted-1-like LET6 [Cucurbita maxima][more]
KAG6589145.15.6e-16399.30Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7022846.13.1e-16197.93Homeobox protein SBH1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022930731.15.2e-16198.61homeobox protein knotted-1-like LET6 [Cucurbita moschata][more]
XP_023529301.12.9e-15996.91homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh11G018050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G62360.13.1e-10372.31KNOX/ELK homeobox transcription factor [more]
AT4G08150.18.8e-7454.45KNOTTED-like from Arabidopsis thaliana [more]
AT1G23380.13.8e-6147.43KNOTTED1-like homeobox gene 6 [more]
AT1G70510.15.0e-6147.58KNOTTED-like from Arabidopsis thaliana 2 [more]
AT1G23380.21.2e-5947.06KNOTTED1-like homeobox gene 6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005541KNOX2SMARTSM01256KNOX2_2coord: 79..130
e-value: 5.3E-25
score: 99.1
IPR005541KNOX2PFAMPF03791KNOX2coord: 84..128
e-value: 2.4E-22
score: 78.2
IPR005539ELK domainSMARTSM01188ELK_2coord: 168..189
e-value: 1.2E-7
score: 41.4
IPR005539ELK domainPFAMPF03789ELKcoord: 168..189
e-value: 1.2E-10
score: 41.1
IPR005539ELK domainPROSITEPS51213ELKcoord: 168..188
score: 11.173647
IPR005540KNOX1SMARTSM01255KNOX1_2coord: 32..76
e-value: 7.9E-15
score: 65.3
IPR005540KNOX1PFAMPF03790KNOX1coord: 34..71
e-value: 3.3E-19
score: 68.3
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 190..255
e-value: 1.4E-11
score: 54.5
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 188..251
score: 11.920164
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 200..252
e-value: 6.68687E-12
score: 57.6385
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 208..247
e-value: 4.6E-17
score: 61.6
NoneNo IPR availableGENE3D1.10.10.60coord: 193..255
e-value: 7.2E-27
score: 94.8
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 10..277
NoneNo IPR availablePANTHERPTHR11850:SF274HOMEOBOX PROTEIN SBH1-LIKE ISOFORM X1coord: 10..277
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 226..249
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 190..265

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G018050.1CmaCh11G018050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding