CmaCh11G017450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G017450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr11: 11575606 .. 11577308 (+)
RNA-Seq Expression	CmaCh11G017450
Synteny	CmaCh11G017450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCACAAAACCACTGAACAATATGTTTCAGAAAGAAAAACTTTCAAGAGGGTGCAAATCCTGGTTTTACCTATGAGTTCTCGTATACTTATTTCATGTTGGTTCATAAACTTTCAATTGTTCCTTTTTTGTTTTTTTTTTTCTTTTATATATAACATTTGGGGGGGAGAGATTCAAATATTTAGCCTCTTGGTTGATGGTACATGTCAATTAATCTTTTCAAATAATTTGTTTTAGTTTCTAAACCTGAATAGAAAACTATTTTAATCATAGCCAATGTAACAGTCAAAACTCATCGCTAGTAGATATTATCCTATTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTAAAACGTGTCTATTAGGGAGAGGTTTTCACACCCTTATAAAGAATGCTTTGTTCCCCTCTCCAATTGATGTGGAATCTCACAATCCACCCGCCCCCCCCTTGGGACCCAGCGTATTCTCTAGCACTCGTTTTCCTTTCCAATTGATATGAAGTCACCCAATCCACCCCCTCCGAGGCCCATCGTCCTAGCTGGCACACCGCCATGTGTCCACCCCCCTTCGAGCTCAGCCTCCTCACTGCCAAATTGTCCGATGTCTTACTCTAATACTATTTGTAACAACCTAAGCCCACCGTTAGCCGATATTGTTCTCTTTGAGCTTTCCTTTCTAAGCTTCCCCTCAAGGTTTTCAAATGCATCTACTTGGGAGAGGTTTCCACACCTTTATAACTAATGCATCGTTCCCCTCTCCATCCGAAGTGTGATCTCACAACTAGTTTATTCATCGTGTTGAAAAAAACACAAAACCTGTTTCTAATTTGATATTGAGCCTACTAATGTGTTGTACACATAATAACAATACTAAAGACACGACAAAAATGGTTTCGCTATGTTTCAAAGTTCATGAATCGAAATAGACTAATATGAAAGTTTAATAACTAAAGTAAGATTTAAACCAATGCATTAATACGGCAGCTTTCCAGCCATTTTATGCTTCTAGTATCTGTTGTCTCACTTCTTAATTGTCCTCGAAGGATTCTCAATTCCGAAGCAGTCTAGAACTTGGGGCAATTCTACTTACAAGTGAAAGTACTTACGGGCAAAGCTACAAGGTCGAAAACTTCATTGGAACATGCACTGATTAAGGTATCAGCAACCAATTTCATACCCCCAGAAGCTTCGATTTCAAGCTCTGGTTCCACCGACGCCACAGTCACGGCGGCCCCTGCTAGACGCAAAACATCAACTATAATAACAGCTTCCATTTCCTCAGTTCCAAATCCGATAGGAACCAGAACCTGCCCACACACACATGAGTTCAGTACTTATTTTTCCTCTTCTAAACACTCTTAAGAAAATCGATCATATAAGATTAGTTACTCGTTGATTCATCAAGAAATGGAAACCCCACAATGATTTTATAGGTTAAGAAGAAATGGCAAAATGGATATCGTAGAAGGACCTTCTTGAGAGGCATAGATGGAGATGAACTCGCAGTCATCGTACCGGAACTCGATAGCGTTGAAGGAGAAGTTGGAGAGAGGGTTCTCGTGGCTGTCGCAGAGAGTTTCGTGGCAATTGTTTTCCGCTGTTTGGATGCCGTCAGAGTAAACGAAGGAGATGAAACAGTGGTGGTAGCAGGTACCGCCATGGGAGAGAGCTTGAGCAGAGCAGTTGGTATCGAGTAA

mRNA sequence

ATGCCCCACAAAACCACTGAACAATATGTTTCAGAAAGAAAAACTTTCAAGAGGGTGCAAATCCTGGTTAAGAAGAAATGGCAAAATGGATATCGTAGAAGGACCTTCTTGAGAGGCATAGATGGAGATGAACTCGCAGTCATCGTACCGGAACTCGATAGCGTTGAAGGAGAAGTTGGAGAGAGGGTTCTCGTGGCTGTCGCAGAGAGTTTCGTGGCAATTGTTTTCCGCTGTTTGGATGCCGTCAGAGTAAACGAAGGAGATGAAACAGTGGTGGTAGCAGGTACCGCCATGGGAGAGAGCTTGAGCAGAGCAGTTGGTATCGAGTAA

Coding sequence (CDS)

ATGCCCCACAAAACCACTGAACAATATGTTTCAGAAAGAAAAACTTTCAAGAGGGTGCAAATCCTGGTTAAGAAGAAATGGCAAAATGGATATCGTAGAAGGACCTTCTTGAGAGGCATAGATGGAGATGAACTCGCAGTCATCGTACCGGAACTCGATAGCGTTGAAGGAGAAGTTGGAGAGAGGGTTCTCGTGGCTGTCGCAGAGAGTTTCGTGGCAATTGTTTTCCGCTGTTTGGATGCCGTCAGAGTAAACGAAGGAGATGAAACAGTGGTGGTAGCAGGTACCGCCATGGGAGAGAGCTTGAGCAGAGCAGTTGGTATCGAGTAA

Protein sequence

MPHKTTEQYVSERKTFKRVQILVKKKWQNGYRRRTFLRGIDGDELAVIVPELDSVEGEVGERVLVAVAESFVAIVFRCLDAVRVNEGDETVVVAGTAMGESLSRAVGIE

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh11G017450 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G017450 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G017450 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G017450 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000160	GGDEF domain	PROSITE	PS50887	GGDEF	coord: 43..109 score: 8.517121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G017450.1	CmaCh11G017450.1	mRNA