CmaCh11G017330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G017330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein RALF-like 4
Location	Cma_Chr11: 11514860 .. 11515225 (-)
RNA-Seq Expression	CmaCh11G017330
Synteny	CmaCh11G017330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of CmaCh11G017330 vs. ExPASy Swiss-Prot
Match: Q6NME6 (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 52  TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017330 vs. ExPASy Swiss-Prot
Match: Q9FZA0 (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESM--TEDSRRQ 60
           M    + +F LL+ A+VA  SV     +Y  +    N +      D  ES+  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAK-SV---NATYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           L +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]

BLAST of CmaCh11G017330 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGC 117
           A K++++Y AL KN++PC RRG+SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmaCh11G017330 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-10
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 31  SSLVDDNSKYSFFGGDSSESMTEDS---RRQLFQYGFAYNTEARKRFLTYYALSKNNIPC 90
           S+ + D     + GG+  E    DS   RR L          A +R+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017330 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 11  LLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEA 70
           +L   + A  S      S D      +S +S   G  +E + E+   + F    +    A
Sbjct: 13  ILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRRILA 72

Query: 71  RKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           +K++++Y A+ +N++PC RRG+SYY+C++  + NPY RGC+ IT C R
Sbjct: 73  QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017330 vs. ExPASy TrEMBL
Match: A0A6J1JL71 (protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486206 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF
Sbjct: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of CmaCh11G017330 vs. ExPASy TrEMBL
Match: A0A6J1JIT9 (protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486203 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSS--ESMTEDSRRQ 60
           METMKICLFLLLVFA+VAP S AFHETS+ SSLVDDNS+YSFFGG SS  E+MTEDSRRQ
Sbjct: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAYN EARKRFLTYYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 122
           FTD
Sbjct: 121 FTD 123

[Close]

BLAST of CmaCh11G017330 vs. ExPASy TrEMBL
Match: A0A6J1EIG3 (rapid alkalinization factor 23-like OS=Cucurbita moschata OX=3662 GN=LOC111434549 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           METMKI L LLLVF  VAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLF
Sbjct: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of CmaCh11G017330 vs. ExPASy TrEMBL
Match: A0A6J1EIU0 (protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434547 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.6e-51
Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVA-PFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQL 60
           MET+K+CLFLL V AVVA P S A+HETS DSS V+D SKYSFFGGDSSE+MTEDSRRQL
Sbjct: 1   METVKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQL 60

Query: 61  FQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAYN EAR+RFLTYYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARF
Sbjct: 61  FQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120

Query: 121 TD 122
           TD
Sbjct: 121 TD 122

[Close]

BLAST of CmaCh11G017330 vs. ExPASy TrEMBL
Match: A0A6J1EPT5 (protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434548 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50
Identity = 105/122 (86.07%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVA-PFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQL 60
           METMK+CLFLLLVFA V+ PFS AFHETS  SS  D +S+YSFFGGDSSE++TEDSRRQL
Sbjct: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITEDSRRQL 60

Query: 61  FQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAYN EAR+RFLTYYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARF
Sbjct: 61  FQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120

Query: 121 TD 122
           TD
Sbjct: 121 TD 122

[Close]

BLAST of CmaCh11G017330 vs. NCBI nr
Match: XP_022989015.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 7.6e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF
Sbjct: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of CmaCh11G017330 vs. NCBI nr
Match: XP_022989011.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 4.4e-53
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSS--ESMTEDSRRQ 60
           METMKICLFLLLVFA+VAP S AFHETS+ SSLVDDNS+YSFFGG SS  E+MTEDSRRQ
Sbjct: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAYN EARKRFLTYYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 122
           FTD
Sbjct: 121 FTD 123

[Close]

BLAST of CmaCh11G017330 vs. NCBI nr
Match: XP_023531888.1 (protein RALF-like 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M TMK+C+FLLLVF VV PFS AFHETS+ SSL+DD SKYSFFGGDSSE+MTED+RRQLF
Sbjct: 15  MGTMKLCIFLLLVFVVVVPFSFAFHETSHSSSLLDDISKYSFFGGDSSEAMTEDTRRQLF 74

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAYN EARKR L+YYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 75  QYGFAYNAEARKRVLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 134

Query: 121 D 122
           D
Sbjct: 135 D 135

[Close]

BLAST of CmaCh11G017330 vs. NCBI nr
Match: KAG6588679.1 (Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022466.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52
Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 4   MKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYG 63
           MKICL LLLVFAVVAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLFQYG
Sbjct: 1   MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSSEAMTEDSRRQLFQYG 60

Query: 64  FAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           F YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 61  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 118

[Close]

BLAST of CmaCh11G017330 vs. NCBI nr
Match: XP_022927736.1 (rapid alkalinization factor 23-like [Cucurbita moschata])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           METMKI L LLLVF  VAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLF
Sbjct: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of CmaCh11G017330 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 80.9 bits (198), Expect = 7.9e-16
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 52  TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017330 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESM--TEDSRRQ 60
           M    + +F LL+ A+VA  SV     +Y  +    N +      D  ES+  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAK-SV---NATYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           L +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]

BLAST of CmaCh11G017330 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 31  SSLVDDNSKYSFFGGDSSESMTEDS---RRQLFQYGFAYNTEARKRFLTYYALSKNNIPC 90
           S+ + D     + GG+  E    DS   RR L          A +R+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017330 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  ++++Y AL +N +PC RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmaCh11G017330 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 11  LLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEA 70
           +L   + A  S      S D      +S +S   G  +E + E+   + F    +    A
Sbjct: 13  ILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRRILA 72

Query: 71  RKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           +K++++Y A+ +N++PC RRG+SYY+C++  + NPY RGC+ IT C R
Sbjct: 73  QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

The following BLAST results are available for this feature:

BLAST of CmaCh11G017330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NME6	1.1e-14	56.52	Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1	[more]
Q9FZA0	1.6e-13	43.80	Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=1 SV=1	[more]
Q945T0	2.2e-10	57.45	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	2.8e-10	40.66	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	2.4e-09	32.41	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CmaCh11G017330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JL71	3.7e-61	100.00	protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486206 PE=3 SV=1	[more]
A0A6J1JIT9	2.1e-53	89.43	protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486203 PE=3 SV=1	[more]
A0A6J1EIG3	6.9e-52	86.78	rapid alkalinization factor 23-like OS=Cucurbita moschata OX=3662 GN=LOC11143454...	[more]
A0A6J1EIU0	2.6e-51	86.89	protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434547 PE=3 SV=1	[more]
A0A6J1EPT5	1.0e-50	86.07	protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434548 PE=3 SV=1	[more]

BLAST of CmaCh11G017330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989015.1	7.6e-61	100.00	protein RALF-like 4 [Cucurbita maxima]	[more]
XP_022989011.1	4.4e-53	89.43	protein RALF-like 4 [Cucurbita maxima]	[more]
XP_023531888.1	1.7e-52	86.78	protein RALF-like 4 [Cucurbita pepo subsp. pepo]	[more]
KAG6588679.1	6.4e-52	88.98	Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022466...	[more]
XP_022927736.1	1.4e-51	86.78	rapid alkalinization factor 23-like [Cucurbita moschata]	[more]

BLAST of CmaCh11G017330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33775.1	7.9e-16	56.52	ralf-like 19	[more]
AT1G28270.1	1.1e-14	43.80	ralf-like 4	[more]
AT3G16570.1	2.0e-11	40.66	rapid alkalinization factor 23	[more]
AT4G15800.1	1.0e-10	51.02	ralf-like 33	[more]
AT3G05490.1	1.7e-10	32.41	ralf-like 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 68..118 e-value: 2.2E-18 score: 66.9
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 4..120
None	No IPR available	PANTHER	PTHR33136:SF84	PROTEIN RALF-LIKE 19	coord: 4..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G017330.1	CmaCh11G017330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region