CmaCh11G016130 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G016130
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr11: 10608983 .. 10610531 (-)
RNA-Seq ExpressionCmaCh11G016130
SyntenyCmaCh11G016130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTTAACAGTGCAACTTCTGACTTTCTTTGCTTCATAACGAGCTACGGGAGGTGGCTCGTGCTGGTTTTGTGACTTAAGCAAAGAAATAAAAACCAGAATCTATCGTAGTTCGGTTACTTGAAGCCCTTGATTGTTTGAGAAAGTCATCCCAGGTTTGGAACTTTGTTTTCTTCTTTTAGCTGTGGATAATTACAGTTCAGTTGTTTTCAAGTTTAATTAGATTTGATTGTCTTAGGAAAACTTGGACCAAGGGATATTTGGAAGTAATTCAAAGGAGAACGAGGTAAGTCCAAGTTCATAAATTGCCAATCTGTGAGTGCTTTTAAGGCATGTAATGACTGAGATTATTCTGTATTTATGAGTTTTTTGTTTGTCAAAGAATCTAGCAAGAAGAGACCTTAAAGTCGATTCGTGGATTAGAGGTCGGTCGGTATGCAATCGTTTCCATTATGCTCAATGAGCAACCTTGTTTTCATCTAAATTCTGCAATTCTATATCTGAGTTCATATCAAAACCTGAAGAAACTGAGGAACAATTAAAATGAAGAAGTTAGTGAAGAAAAAAAACAACTTTTGCTGTTCATTTATTATTATTATTATTATTTGGTGATGCATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTGTCCTTAGCAGACGCGTTTTGAAAATCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCAGTGGGCTTGGACTGTTACAAATGGTATTAGAGCTAGACACCAGGCAATGTGCCAGTGAGGAGGCTGAGCCCCGAAAGGGGTGGTTACTAGGCGGTGTGCCAACAAGGACGCTGGACCCAAAAAGAGGGTGGATTAGGGGGTCCCACATCAATTGGAGAAGGGAACGAGTGCCAACGACGACGCTGGATCCTTAAGTGTGGAGGAGGGTGAATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGCGTGGAAACCTCTATTTAGCAGACGCGTTTTAAAAACCTTAAAGGGAAGTCCGAAAGGGAAAGTCCAAAGACGACAATATCTACTAGCGGTAGGGTTATAGACGGTTACATGCATGTTCTCTAAAATGGAAGTTTCATTTTTCAGTTTGAGAAGTATGATTTGCATTATCTTCTGATATTCTTCTGCTGTTTGTGAGATGGGAGTTCTTGAAGATTAAAGTAAGATTAGAACTATATTCATTTCATTTAGATTGGTATTTCATTTCAAACCATACCAGTTTCAAAGCAGGTACAGATTCCTATGGAACAAATGTTTGTATCTGAATCCATTGATCTTGTGTTAGCTGTCTTGATTTGGTTTAGTTTTGGATAGTTAAATCAAGAAATTCTTCTGTTCTAGGACTGTGATCAAAGTGAAAATCAAGTCGTTTGCTTTGTGCCAAGGGTGTTGGTTGAGATCGATTTTCGGCTCGTTTTCGCCCTAACTGATGCCAAAATTGTGTTTCTTTTAAACGAACAAAACTGA

mRNA sequence

ATGACTCTTAACAGTGCAACTTCTGACTTTCTTTGCTTCATAACGAGCTACGGGAGGTGGCTCGTGCTGGAAAACTTGGACCAAGGGATATTTGGAAGTAATTCAAAGGAGAACGAGAATCTAGCAAGAAGAGACCTTAAAGTCGATTCGTGGATTAGAGGTCGGTCGGACTGTGATCAAAGTGAAAATCAAGTCGTTTGCTTTGTGCCAAGGGTGTTGGTTGAGATCGATTTTCGGCTCGTTTTCGCCCTAACTGATGCCAAAATTGTGTTTCTTTTAAACGAACAAAACTGA

Coding sequence (CDS)

ATGACTCTTAACAGTGCAACTTCTGACTTTCTTTGCTTCATAACGAGCTACGGGAGGTGGCTCGTGCTGGAAAACTTGGACCAAGGGATATTTGGAAGTAATTCAAAGGAGAACGAGAATCTAGCAAGAAGAGACCTTAAAGTCGATTCGTGGATTAGAGGTCGGTCGGACTGTGATCAAAGTGAAAATCAAGTCGTTTGCTTTGTGCCAAGGGTGTTGGTTGAGATCGATTTTCGGCTCGTTTTCGCCCTAACTGATGCCAAAATTGTGTTTCTTTTAAACGAACAAAACTGA

Protein sequence

MTLNSATSDFLCFITSYGRWLVLENLDQGIFGSNSKENENLARRDLKVDSWIRGRSDCDQSENQVVCFVPRVLVEIDFRLVFALTDAKIVFLLNEQN
Homology
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BLAST of CmaCh11G016130 vs. NCBI nr
Match: KAG6588801.1 (F-box protein CPR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-07
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 24  ENLDQGIFGSNSKENENLARRDLKVDSWIRGRS 57
           ENLD+GIFGSNSKENENLARR LKVDSWIRGRS
Sbjct: 399 ENLDEGIFGSNSKENENLARRVLKVDSWIRGRS 431

The following BLAST results are available for this feature:
BLAST of CmaCh11G016130 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh11G016130 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh11G016130 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588801.12.3e-0793.94F-box protein CPR1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmaCh11G016130 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G016130.1CmaCh11G016130.1mRNA