CmaCh11G015990 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G015990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Very-long-chain 3-oxoacyl-CoA synthase
Location	Cma_Chr11: 10455008 .. 10455820 (+)
RNA-Seq Expression	CmaCh11G015990
Synteny	CmaCh11G015990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTCAATATTTTCAACGATCTCCATTACTGGTTGGTCGATCACCCGAATATCCTCAACTTCTCGTGGTCTCGGGGTCAAACTCTAGGCTCATCCCCACTTTTCCTCACCATCACCGTCCTCTTGTACCTCTCGCTTACCTTCCTTCTCTCCAACCTCACCGTCCCCAACCTCCGCTCGGACATTCTCAAGCGAATCTCCGTCGTTCATAATCTCATCCTCCTCGCCCTCTCCTTCACAATGGCCCTTGGCTGCACACTTGCAACGTTCTCCCACGCCCCTCACGTTCACTACATTCTTTGCCTTCCTCCCAACACCCCATCACGAGGGCCGCTCTTCTTCTGGGCCTATATCTTCTACCTCTCGAAGATCGTCGAGTTCATCGACACGTTCTTAATCATACTCAGCGGCTCGATCAAACGCTTGACATTCCTTCACGTTTATCACCATGCCACTGTAGTGATCATGTGTTACCTATGGCTGCATTCGTCGCAGTCTTTGTTTCCATTGGTTCTTGTCACGAACTCGTCGGTTCACGTACTGATGTACACGTATTACTTGTCGTGTGCACTCGGGGTGCGGCCGAGATGGAAGAGGATCGTGACGGAGTGTCAAATTGTGCAGTTTCAGTTCAGCTTTGTGGTGTTGGCTTTGATGCTTTATTTTCATGCCACTGATAAGGGCTCAGGCTGCGCTGGCGTGTGGGGTTGGTGCTTCAATGTTGCGTTTTATTCGACACTTCTGGCTTTGTTCTCTGATTTTCATGCTAAGAACTACGGCGGAAAGACGGCGGCCAAAAAATTGGCTTGA

mRNA sequence

ATGAGTCTCAATATTTTCAACGATCTCCATTACTGGTTGGTCGATCACCCGAATATCCTCAACTTCTCGTGGTCTCGGGGTCAAACTCTAGGCTCATCCCCACTTTTCCTCACCATCACCGTCCTCTTGTACCTCTCGCTTACCTTCCTTCTCTCCAACCTCACCGTCCCCAACCTCCGCTCGGACATTCTCAAGCGAATCTCCGTCGTTCATAATCTCATCCTCCTCGCCCTCTCCTTCACAATGGCCCTTGGCTGCACACTTGCAACGTTCTCCCACGCCCCTCACGTTCACTACATTCTTTGCCTTCCTCCCAACACCCCATCACGAGGGCCGCTCTTCTTCTGGGCCTATATCTTCTACCTCTCGAAGATCGTCGAGTTCATCGACACGTTCTTAATCATACTCAGCGGCTCGATCAAACGCTTGACATTCCTTCACGTTTATCACCATGCCACTGTAGTGATCATGTGTTACCTATGGCTGCATTCGTCGCAGTCTTTGTTTCCATTGGTTCTTGTCACGAACTCGTCGGTTCACGTACTGATGTACACGTATTACTTGTCGTGTGCACTCGGGGTGCGGCCGAGATGGAAGAGGATCGTGACGGAGTGTCAAATTGTGCAGTTTCAGTTCAGCTTTGTGGTGTTGGCTTTGATGCTTTATTTTCATGCCACTGATAAGGGCTCAGGCTGCGCTGGCGTGTGGGGTTGGTGCTTCAATGTTGCGTTTTATTCGACACTTCTGGCTTTGTTCTCTGATTTTCATGCTAAGAACTACGGCGGAAAGACGGCGGCCAAAAAATTGGCTTGA

Coding sequence (CDS)

ATGAGTCTCAATATTTTCAACGATCTCCATTACTGGTTGGTCGATCACCCGAATATCCTCAACTTCTCGTGGTCTCGGGGTCAAACTCTAGGCTCATCCCCACTTTTCCTCACCATCACCGTCCTCTTGTACCTCTCGCTTACCTTCCTTCTCTCCAACCTCACCGTCCCCAACCTCCGCTCGGACATTCTCAAGCGAATCTCCGTCGTTCATAATCTCATCCTCCTCGCCCTCTCCTTCACAATGGCCCTTGGCTGCACACTTGCAACGTTCTCCCACGCCCCTCACGTTCACTACATTCTTTGCCTTCCTCCCAACACCCCATCACGAGGGCCGCTCTTCTTCTGGGCCTATATCTTCTACCTCTCGAAGATCGTCGAGTTCATCGACACGTTCTTAATCATACTCAGCGGCTCGATCAAACGCTTGACATTCCTTCACGTTTATCACCATGCCACTGTAGTGATCATGTGTTACCTATGGCTGCATTCGTCGCAGTCTTTGTTTCCATTGGTTCTTGTCACGAACTCGTCGGTTCACGTACTGATGTACACGTATTACTTGTCGTGTGCACTCGGGGTGCGGCCGAGATGGAAGAGGATCGTGACGGAGTGTCAAATTGTGCAGTTTCAGTTCAGCTTTGTGGTGTTGGCTTTGATGCTTTATTTTCATGCCACTGATAAGGGCTCAGGCTGCGCTGGCGTGTGGGGTTGGTGCTTCAATGTTGCGTTTTATTCGACACTTCTGGCTTTGTTCTCTGATTTTCATGCTAAGAACTACGGCGGAAAGACGGCGGCCAAAAAATTGGCTTGA

Protein sequence

MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLRSDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCFNVAFYSTLLALFSDFHAKNYGGKTAAKKLA

Homology

[Close]

BLAST of CmaCh11G015990 vs. ExPASy Swiss-Prot
Match: Q86JM5 (Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272012 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 83/254 (32.68%), Postives = 124/254 (48.82%), Query Frame = 0


Query: 20  LNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLRSDILKRISVVHNLILLALS 79
           +NF +  G T  S    L   + LYL + F +  L + N +   LK +S++HN IL   S
Sbjct: 37  VNFKFKFGTTPFSQFQILPSVISLYLVIIFSIKFL-MRNRKPFSLKYVSILHNAILCIWS 96

Query: 80  FTMALGCTLATFSH--APHVHYILCLPPNTPSRGPLFFWAYIFYLSKIVEFIDTFLIILS 139
             M +G          A    + +C   +   +GP ++W+YIFY+SK  E +DT +I+L 
Sbjct: 97  LVMCVGILYEVIKRITAEGPLFTVCETVSGFDKGPAYYWSYIFYISKFYELLDTVIIVLK 156

Query: 140 GSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALGVRPR 199
              K L FLHVYHH  VV +C+ +++S  +L   V+  N+ VHV MY +Y     G    
Sbjct: 157 K--KPLIFLHVYHHCIVVWLCWYFMYSGWNLQLWVVFLNTFVHVFMYYFYFQTGRGKTVW 216

Query: 200 WKRIVTECQIVQFQFSFVVLALMLYFHATD---KGSGC-----AGVWGWCFNVAFYSTLL 259
           WK+ +T  QI+Q    F+ L +    H+       S C     A +  +  N +F    L
Sbjct: 217 WKKYITMIQIIQ----FICLGIAGLLHSAAINLNSSPCFTHYPAFISAYLINFSF----L 276

Query: 260 ALFSDFHAKNYGGK 264
            LFS F  K+Y  K
Sbjct: 277 FLFSQFFVKSYSNK 279

[Close]

BLAST of CmaCh11G015990 vs. ExPASy Swiss-Prot
Match: Q54TC9 (Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum OX=44689 GN=sre1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.2e-22
Identity = 72/194 (37.11%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 21  NFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLRSDILKRISVVHNLILLALSF 80
           NF W  G T  SS +F   T ++Y+ + F L  + + N +  +LK  S++HN+ L+ LSF
Sbjct: 17  NFRWESGVTPLSSYVFPFSTSVIYVLVIFALQAI-MKNKKGMVLKGFSIIHNINLIILSF 76

Query: 81  TMALGCTLATFSH--APHVHYILCLPPNTPSRGPLFFWAYIFYLSKIVEFIDTFLIILSG 140
           +M  G   A +          ++C   +   +G + FW YIFYLSK  E +DT  +IL+ 
Sbjct: 77  SMMSGVMYAAYQQYLEQGAFSLVCEQSSQSVQGRIGFWIYIFYLSKYYELVDT--VILAL 136

Query: 141 SIKRLTFLHVYHHATVVIMCYLWLHSSQSLFP-LVLVTNSSVHVLMYTYYLSCALGVRPR 200
             K + FLH++HH  +V + + WLH    +      + NS +HVLMY YYL   LG  P 
Sbjct: 137 KKKPIIFLHIFHHMAMVPVTWQWLHDQWLVGSWWCTLVNSFIHVLMYYYYLQTTLG-NPC 196

Query: 201 W-KRIVTECQIVQF 211
           W K+ +T+ QIVQF
Sbjct: 197 WFKKYITKAQIVQF 206

[Close]

BLAST of CmaCh11G015990 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-21
Identity = 82/276 (29.71%), Postives = 134/276 (48.55%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYL----SLTFLLSNLTV 60
           MS  + N + Y+L +HP I+ F WS  Q+ GS+  FL  ++ LY+    SL  LLS +  
Sbjct: 1   MSTALINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRR 60

Query: 61  PNLRSDILKRISVVHNLILLALSFTMALGCTLATFSH-------------APHVHYILCL 120
            N RS  L  I  +H+L++  LS T+  G  L+  +              A  + ++LC 
Sbjct: 61  SN-RSVPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCF 120

Query: 121 PPNTPSRGPLFFWAYIFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLH 180
           P  T   G +FFW+Y+FYL++ +    T   +L    +RL    ++ ++ +    +LWL 
Sbjct: 121 PLGTRPSGRVFFWSYVFYLTRFLHMFRTIFAVLRS--RRLAVSQLFCNSVMAFTSFLWLE 180

Query: 181 SSQSLFPLVLVTNSSVHVLMYTYYLSCALGV-RPRWKRIVTECQIVQFQFSFVVLALMLY 240
            SQS   L +++ + V+ ++Y Y      G+    +   V  CQ+V    + V  A +L 
Sbjct: 181 FSQSYQILAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLT 240

Query: 241 FHATDKGSGCAGVWGWCFNVAFYSTLLALFSDFHAK 259
            H   KG GC G+  W  N      +L LF +F+ +
Sbjct: 241 MHLF-KG-GCNGIGAWGLNSVLNGAILLLFLNFYVR 271

[Close]

BLAST of CmaCh11G015990 vs. ExPASy Swiss-Prot
Match: Q54CJ4 (Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 84/255 (32.94%), Postives = 125/255 (49.02%), Query Frame = 0


Query: 22  FSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLRSDILKRISVVHNLILLALSFT 81
           F W    T  S+ LF  +    YL+L + L  + + N +   L   ++ HNL L  LS  
Sbjct: 23  FRWKNEVTPFSNILFPIVCSFGYLALIYGL-QIFMKNKKEIKLHGFAMFHNLFLCLLSLL 82

Query: 82  MALGCT--LATFSHAPHVHYILCLPPNTPSRGPLFFWAYIFYLSKIVEFIDTFLIILSGS 141
           M LG    +A +S    ++ I+C P ++   G + F  YIFYLSK+ EFIDT + +L   
Sbjct: 83  MFLGIVIPMAKYSFPHGLYNIICKPIDS---GLVQFSYYIFYLSKVYEFIDTIIQVLRK- 142

Query: 142 IKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALGVRPRWK 201
            K L FLHV+HH   + + +  L        + +  N  VH++MY YY     G+ P WK
Sbjct: 143 -KSLLFLHVWHHFITLWLVWANLKYDTGCQWVDISANCFVHIVMYFYYFQTERGINPWWK 202

Query: 202 RIVTECQIVQFQFSFVVLALMLYFHATD-----KGSGCAGVWGW-CFNVAFYSTLLALFS 261
           + +T CQI+QF    V ++  L +H  D       + C+G W    F+     + L LF 
Sbjct: 203 KHITTCQIIQF---IVDMSSHLAWHFYDTQGNHNSNYCSGTWATSAFSDFVILSFLGLFI 262

Query: 262 DFHAKNYGGKTAAKK 269
            F  K Y  K++ KK
Sbjct: 263 QFFVKAYKKKSSIKK 268

[Close]

BLAST of CmaCh11G015990 vs. ExPASy Swiss-Prot
Match: P25358 (Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ELO2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.3e-18
Identity = 71/205 (34.63%), Postives = 99/205 (48.29%), Query Frame = 0


Query: 70  VHNLILLALSFTMALGCT--LATFSHAPHVHYILCLPPNTPS-RGPLFFWAYIFYLSKIV 129
           +HNL+L +LS T+ L     L        +++ +C   N  +   PL    Y+ Y+ K +
Sbjct: 103 LHNLVLTSLSLTLLLLMVEQLVPIIVQHGLYFAIC---NIGAWTQPLVTLYYMNYIVKFI 162

Query: 130 EFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTY 189
           EFIDTF ++L    K+LTFLH YHH    ++CY  L  + S+  + +  N  VHV+MY Y
Sbjct: 163 EFIDTFFLVLKH--KKLTFLHTYHHGATALLCYTQLMGTTSISWVPISLNLGVHVVMYWY 222

Query: 190 YLSCALGVRPRWKRIVTECQIVQF-------QFSFVVLALMLYFHATDKGSGCAGVWGWC 249
           Y   A G+R  WK  VT  QI+QF        F+    A+ LYF        C G     
Sbjct: 223 YFLAARGIRVWWKEWVTRFQIIQFVLDIGFIYFAVYQKAVHLYFPILPHCGDCVGSTTAT 282

Query: 250 F-NVAFYSTLLALFSDFHAKNYGGK 264
           F   A  S+ L LF  F+   Y  K
Sbjct: 283 FAGCAIISSYLVLFISFYINVYKRK 302

[Close]

BLAST of CmaCh11G015990 vs. ExPASy TrEMBL
Match: A0A6J1JKX0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC111486708 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR
Sbjct: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
           SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF
Sbjct: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 271
           NVAFYSTLLALFSDFHAKNYGGKTAAKKLA
Sbjct: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 270

[Close]

BLAST of CmaCh11G015990 vs. ExPASy TrEMBL
Match: A0A6J1EM88 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC111434635 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR
Sbjct: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
           SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF
Sbjct: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 271
           NVAFYSTLLALFSDFHAKNYGGKTAAKKLA
Sbjct: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 270

[Close]

BLAST of CmaCh11G015990 vs. ExPASy TrEMBL
Match: A0A6J1HGE1 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC111463845 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.9e-134
Identity = 240/272 (88.24%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MS+ I + LHYWLV+HPNIL+FSWS+G+TLGSSPLFLTITV+ YLSLTFLLSNLT+P+LR
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
             +LKRI+VVHNL+LL LSFTMALGCTLATFSHAPH+HYILCLPP TP++GPLFFWAY+F
Sbjct: 61  PAVLKRITVVHNLVLLVLSFTMALGCTLATFSHAPHLHYILCLPPKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFH T KGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYG--GKTAAKKLA 271
           NV FYS+LLALFSDFHAKNYG  GKTA KKLA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGKTAPKKLA 272

[Close]

BLAST of CmaCh11G015990 vs. ExPASy TrEMBL
Match: A0A6J1HRB0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC111467063 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 238/272 (87.50%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MS+ I + LHYWLV+HPNIL+FSWS+G+TLGSSPLFLTITV+ YLSLTFLLSNLT+P+LR
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
             +LK+I++VHNL+LLALSFTMALGCTLATFSHAPH+HYILCLP  TP++GPLFFWAY+F
Sbjct: 61  PAVLKQITIVHNLVLLALSFTMALGCTLATFSHAPHLHYILCLPQKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFH T KGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYG--GKTAAKKLA 271
           NV FYS+LLALFSDFHAKNYG  GKTA KKLA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGKTAPKKLA 272

[Close]

BLAST of CmaCh11G015990 vs. ExPASy TrEMBL
Match: A0A5D3CNK0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00120 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 237/273 (86.81%), Postives = 253/273 (92.67%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MSL I + L+YWLV+HP ILNFSWS+G+TLGSSPLFLT+TV+ YLSLTFLLSNL++P L 
Sbjct: 1   MSLTITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTVTVISYLSLTFLLSNLSLPPLP 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
             ILKRISVVHNLILLALSFTMALGCTL+TFSHAPH+HYILCLP  TP RGPLFFWAYIF
Sbjct: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPLKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGS KRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALG+RPRWKR+VTECQIVQFQFSFVVLALMLYFH T KG+GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGIRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGTGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYG--GK-TAAKKLA 271
           NV FYS+LLALFSDFHAKNYG  GK TA KK+A
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGANGKMTAPKKVA 273

[Close]

BLAST of CmaCh11G015990 vs. NCBI nr
Match: XP_022927868.1 (putative elongation of fatty acids protein DDB_G0272012 [Cucurbita moschata] >XP_022989706.1 putative elongation of fatty acids protein DDB_G0272012 [Cucurbita maxima] >KAG6588813.1 putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR
Sbjct: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
           SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF
Sbjct: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 271
           NVAFYSTLLALFSDFHAKNYGGKTAAKKLA
Sbjct: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 270

[Close]

BLAST of CmaCh11G015990 vs. NCBI nr
Match: XP_023531743.1 (putative elongation of fatty acids protein DDB_G0272012 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 268/270 (99.26%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MSLNIF+DLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR
Sbjct: 1   MSLNIFDDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
           SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF
Sbjct: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYGGKTAAKKLA 271
           NVAFYS+LLALFSDFHAKNYGGKTAAKKLA
Sbjct: 241 NVAFYSSLLALFSDFHAKNYGGKTAAKKLA 270

[Close]

BLAST of CmaCh11G015990 vs. NCBI nr
Match: KAG6571719.1 (putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011444.1 putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 490.0 bits (1260), Expect = 1.4e-134
Identity = 241/272 (88.60%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MS+ I + LHYWLV+HPNIL+FSWS+G+TLGSSPLFLTITV+ YLSLTFLLSNLT+P+LR
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
             +LKRI+VVHNL+LLALSFTMALGCTLATFSHAPH+HYILCLPP TP++GPLFFWAY+F
Sbjct: 61  PAVLKRITVVHNLVLLALSFTMALGCTLATFSHAPHLHYILCLPPKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFH T KGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYG--GKTAAKKLA 271
           NV FYS+LLALFSDFHAKNYG  GKTA KKLA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGKTAPKKLA 272

[Close]

BLAST of CmaCh11G015990 vs. NCBI nr
Match: XP_022963551.1 (elongation of fatty acids protein sre1-like [Cucurbita moschata])

HSP 1 Score: 488.4 bits (1256), Expect = 3.9e-134
Identity = 240/272 (88.24%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MS+ I + LHYWLV+HPNIL+FSWS+G+TLGSSPLFLTITV+ YLSLTFLLSNLT+P+LR
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
             +LKRI+VVHNL+LL LSFTMALGCTLATFSHAPH+HYILCLPP TP++GPLFFWAY+F
Sbjct: 61  PAVLKRITVVHNLVLLVLSFTMALGCTLATFSHAPHLHYILCLPPKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFH T KGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYG--GKTAAKKLA 271
           NV FYS+LLALFSDFHAKNYG  GKTA KKLA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGKTAPKKLA 272

[Close]

BLAST of CmaCh11G015990 vs. NCBI nr
Match: XP_023553932.1 (elongation of fatty acids protein sre1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.3 bits (1253), Expect = 8.8e-134
Identity = 239/272 (87.87%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNLTVPNLR 60
           MS+ + + LHYWLV+HPNIL+FSWS+G+TLGSSPLFLTITV+ YLSLTFLLSN+T+P+LR
Sbjct: 1   MSMQVSDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNVTLPHLR 60

Query: 61  SDILKRISVVHNLILLALSFTMALGCTLATFSHAPHVHYILCLPPNTPSRGPLFFWAYIF 120
             +LKRI+VVHNL+LLALSFTMALGCTLATFSHAPH+HYILCLPP TP +GPLFFWAY+F
Sbjct: 61  PAVLKRITVVHNLVLLALSFTMALGCTLATFSHAPHLHYILCLPPKTPVQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFH T KGSGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVAFYSTLLALFSDFHAKNYG--GKTAAKKLA 271
           NV FYS+LLALFSDFHAKNYG  GKTA KKLA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGKTAPKKLA 272

[Close]

BLAST of CmaCh11G015990 vs. TAIR 10
Match: AT3G06470.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 302.4 bits (773), Expect = 3.7e-82
Identity = 156/265 (58.87%), Postives = 199/265 (75.09%), Query Frame = 0


Query: 4   NIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNL--TVPNLRS 63
           +I++ L YWLV+HP I NF+W  G+TLGS+  F+++ V +YLS TFLL +   ++P+L  
Sbjct: 3   SIYSSLTYWLVNHPYISNFTWIEGETLGSTVFFVSVVVSVYLSATFLLRSAIDSLPSLSP 62

Query: 64  DILKRISVVHNLILLALSFTMALGCTLA-TFSHA---PHVHYI--LCLPPNTPSRGPLFF 123
            ILK I+ VH+LIL  LS  MA+GCTL+ T SHA   P   ++  +C P +    GPLFF
Sbjct: 63  RILKPITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMARFLHAICFPVDVKPNGPLFF 122

Query: 124 WAYIFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVT 183
           WA +FYLSKI+EF DT LIIL  SI+RL+FLHVYHHATVV+MCYLWL + QS+FP+ LVT
Sbjct: 123 WAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFPIALVT 182

Query: 184 NSSVHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSGCAGV 243
           NS+VHV+MY YY  CA+G RP+WKR+VT+CQIVQF FSF +   ML  H    GSGC G+
Sbjct: 183 NSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLSGWMLREHLF--GSGCTGI 242

Query: 244 WGWCFNVAFYSTLLALFSDFHAKNY 261
           WGWCFN AF ++LLALFS+FH+KNY
Sbjct: 243 WGWCFNAAFNASLLALFSNFHSKNY 265

[Close]

BLAST of CmaCh11G015990 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 268.9 bits (686), Expect = 4.6e-72
Identity = 145/269 (53.90%), Postives = 190/269 (70.63%), Query Frame = 0


Query: 4   NIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLTFLLSNL--TVPNLRS 63
           ++++ L YWLV HP I NF+W+ G+TLGS+  F+ + V LYLS TFLL     ++P L  
Sbjct: 3   SVYSTLTYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLGP 62

Query: 64  DILKRISVVHNLILLALSFTMALGCTLATFSHA---PHVHYILCLPPNTPSRGPLFFWAY 123
            ILK I+ VH+LIL  LS TMA+GCTL+  S +     +   +C P +   +GPLFFWA 
Sbjct: 63  RILKPITAVHSLILFLLSLTMAVGCTLSLISSSDPKARLFDAVCFPLDVKPKGPLFFWAQ 122

Query: 124 IFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSS 183
           +FYLSKI+EF+DT LIIL+ SI+RL+FLHVYHHATVVI+CYLWL + QS+FP+ LV NS+
Sbjct: 123 VFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTRQSMFPVGLVLNST 182

Query: 184 VHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSF-VVLALMLYFHATDKGSGCAGVWG 243
           VHV+MY YY  CA+G RP+WK++VT  Q+VQF F   +  A ML  H    GSGCAG+W 
Sbjct: 183 VHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAWMLPEHYF--GSGCAGIWT 242

Query: 244 WCFNVAFYSTLLALFSDFHAKNYGGKTAA 267
             FN  F ++LLALF +FH+KNY   T +
Sbjct: 243 VYFNGVFTASLLALFYNFHSKNYEKTTTS 269

[Close]

BLAST of CmaCh11G015990 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 82/276 (29.71%), Postives = 134/276 (48.55%), Query Frame = 0


Query: 1   MSLNIFNDLHYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYL----SLTFLLSNLTV 60
           MS  + N + Y+L +HP I+ F WS  Q+ GS+  FL  ++ LY+    SL  LLS +  
Sbjct: 1   MSTALINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRR 60

Query: 61  PNLRSDILKRISVVHNLILLALSFTMALGCTLATFSH-------------APHVHYILCL 120
            N RS  L  I  +H+L++  LS T+  G  L+  +              A  + ++LC 
Sbjct: 61  SN-RSVPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCF 120

Query: 121 PPNTPSRGPLFFWAYIFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLH 180
           P  T   G +FFW+Y+FYL++ +    T   +L    +RL    ++ ++ +    +LWL 
Sbjct: 121 PLGTRPSGRVFFWSYVFYLTRFLHMFRTIFAVLRS--RRLAVSQLFCNSVMAFTSFLWLE 180

Query: 181 SSQSLFPLVLVTNSSVHVLMYTYYLSCALGV-RPRWKRIVTECQIVQFQFSFVVLALMLY 240
            SQS   L +++ + V+ ++Y Y      G+    +   V  CQ+V    + V  A +L 
Sbjct: 181 FSQSYQILAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLT 240

Query: 241 FHATDKGSGCAGVWGWCFNVAFYSTLLALFSDFHAK 259
            H   KG GC G+  W  N      +L LF +F+ +
Sbjct: 241 MHLF-KG-GCNGIGAWGLNSVLNGAILLLFLNFYVR 271

[Close]

BLAST of CmaCh11G015990 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 72/275 (26.18%), Postives = 126/275 (45.82%), Query Frame = 0


Query: 10  HYWLVDHPNILNFSWSRGQTLGSSPLFLTITVLLYLSLT-----FLLSNLTVPNLRSDI- 69
           +Y+L +HP I+NF WS  Q+  S+  FL   V  Y+         LL  L++ N R    
Sbjct: 5   NYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRRRGFS 64

Query: 70  LKRISVVHNLILLALSFTMALGCTLATF------------SHAPHVHYILCLPPNTPSRG 129
           L  I  +H+L +  +S  + +G  L+              +    + + LC P  T + G
Sbjct: 65  LGPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRASG 124

Query: 130 PLFFWAYIFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPL 189
            +FFW+Y FYLS+ +    TF  ++    ++L+F  + + ++++ + +LWL  SQS   +
Sbjct: 125 RVFFWSYAFYLSRFLHLFRTFFSVIRR--RKLSFFQLINQSSLLCISFLWLEYSQSFQVV 184

Query: 190 VLVTNSSVHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHATDKGSG 249
            ++  +  + ++Y Y     +G+R      V  CQ +      V    +L  H   +G G
Sbjct: 185 AILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRG-G 244

Query: 250 CAGVWGWCFNVAFYSTLLALFSDFHAKNYGGKTAA 267
           C G+  W FN    + +  L+  F+ K     T A
Sbjct: 245 CNGIGAWLFNSVLNAVITLLYLKFYCKTRSMMTKA 276

The following BLAST results are available for this feature:

BLAST of CmaCh11G015990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86JM5	1.4e-22	32.68	Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoid...	[more]
Q54TC9	4.2e-22	37.11	Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum OX=44689 GN=s...	[more]
Q9SYY4	2.7e-21	29.71	Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3...	[more]
Q54CJ4	3.0e-20	32.94	Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA...	[more]
P25358	6.3e-18	34.63	Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204...	[more]

BLAST of CmaCh11G015990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKX0	1.1e-150	100.00	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC1114867...	[more]
A0A6J1EM88	1.1e-150	100.00	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HGE1	1.9e-134	88.24	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1HRB0	2.1e-133	87.50	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC1114670...	[more]
A0A5D3CNK0	1.4e-129	86.81	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CmaCh11G015990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927868.1	2.3e-150	100.00	putative elongation of fatty acids protein DDB_G0272012 [Cucurbita moschata] >XP...	[more]
XP_023531743.1	2.5e-149	99.26	putative elongation of fatty acids protein DDB_G0272012 [Cucurbita pepo subsp. p...	[more]
KAG6571719.1	1.4e-134	88.60	putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subs...	[more]
XP_022963551.1	3.9e-134	88.24	elongation of fatty acids protein sre1-like [Cucurbita moschata]	[more]
XP_023553932.1	8.8e-134	87.87	elongation of fatty acids protein sre1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh11G015990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06470.1	3.7e-82	58.87	GNS1/SUR4 membrane protein family	[more]
AT3G06460.1	4.6e-72	53.90	GNS1/SUR4 membrane protein family	[more]
AT4G36830.1	1.9e-22	29.71	GNS1/SUR4 membrane protein family	[more]
AT1G75000.1	4.0e-20	26.18	GNS1/SUR4 membrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002076	ELO family	PFAM	PF01151	ELO	coord: 32..267 e-value: 4.8E-51 score: 173.7
IPR002076	ELO family	PANTHER	PTHR11157	FATTY ACID ACYL TRANSFERASE-RELATED	coord: 4..265
None	No IPR available	PANTHER	PTHR11157:SF132	ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE	coord: 4..265
IPR030457	ELO family, conserved site	PROSITE	PS01188	ELO	coord: 143..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G015990.1	CmaCh11G015990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034625	fatty acid elongation, monounsaturated fatty acid
biological_process	GO:0034626	fatty acid elongation, polyunsaturated fatty acid
biological_process	GO:0019367	fatty acid elongation, saturated fatty acid
biological_process	GO:0030148	sphingolipid biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity
molecular_function	GO:0102756	very-long-chain 3-ketoacyl-CoA synthase activity