CmaCh11G015750 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G015750
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	general transcription factor 3C polypeptide 5-like
Location	Cma_Chr11: 10301757 .. 10310581 (+)
RNA-Seq Expression	CmaCh11G015750
Synteny	CmaCh11G015750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGATAGCGCGGGCCGGGTCGGCTTCTTCCTTCTTCTCCTTCCTCCCCGCGACGGTCTTCTCCTTCTTTGTTCTTCGTGGTTGCAGAAACGGCGATTCCTCCTCCTCTTCTTCGACTTTTTTCGTCGCTCGCCCACGTTCCTTCCTTCCTCTGCTTCAGCCTCTGACCGTCCGGCTTCGTCTACGAGCAAAAGTCGTCTTCGCCAGCTTATGGCCTCGAGTTTCTCCTCGGCGTGCACCGTGATTGCGAAGGTGGATTCTTAACATTGCAAGATCTTCCGTTGGAATCTCTCCCGTGGCGTTGCTTCGACTCCAATAAAAAACACTTGAGGTTTTCACTCTCCTCCTTCAAACTCGCTCTCTCTGATTTGATGAACACCTTGGCCTCTCGAACCTACCGAAATCAAGAAGGAAATCGGGGTGGTTGGTTTACCCACGCCTTCTGTCAGCCTCTGTCCTCCCTCTGGCCAGTGTACGGTCAGCGGCTTCCTTCGTCCTTCCACCCTCTTTTCTCTCTATTCATTTATTCCTCATCTGTACTGGTTATTACAGCTTGAATTATGCACATGCAACTATGACTATCTTTACATTTTCTTTGCCTTTGTTGAATTCGTTTTTATGCTATGTAAAATGTTGTGTTGCCAGTAGAAAAAAAAGAAAAAAAAAAAAAAAAACTGTGTGGCTAAAAGTAGAAGTGAATTGTGTCTATAACAGGAATTTAGAATGGGGAAGCTGAAAGACAACACTATCTCAGGGTTCTTACCTACTGCCCAGGTTTTTGCAGTTCATTATCCTGGTTATCCTTCGTCAAAGCGACGGGCAATTGAAACTCTAGGAGGAAAACAATCAATTCTCAAGGTACAATTAATAGTTGATATCAAATAATTGGAAATCATTTTGAAATGTCTCACCGTTCCTTTTATTTCAGTTTTCGAGTTTTTCTCTTAGTATAAATCCTGATTGATTTGTAAATCTTTTGTTTTCGATAATAAACTGATGCTTCCTTGTGGAATGAACATCATTCGTTGGAAGTTGAAGTTGATTAATTGTGGGATTTTTTTCCCATTTTTTTGTTGATTCTCTTTTTATTTAGTTTTACAACGTGACATAATTTGATTTGAGTAATTCCATTTCTTTTCATGATTAGAATGAATTCTATTAAATAATGTTACCCTCTATTGTGAAAAGTGTATTATAGAAAGGTTAAAAAGAGGACTTTTGCTTCTGACTTTATTTAGTGGGACATGTTGTGTACAGTGGGAAGGGCAGTCGTATTTGTAGGGAAATGAGATGAATGTGTAGGGAGAATTGTGAATGTTATCAAAGTAGATGGTAGGGAAGAAGGGTTATCAGCTCTCATAGAATAGTCAAGTTTAGTGTTTTGTGAGTCTGAATCAATAGAATAGTAAGGTGATACCTTACACATAATTCTTTTTTCACCTCATCCGTGCTCTACATATCATAGAAAATGTCCAAAAGAATGTGACTCTGCGCTTTGAGGAGGTTATAATATATTAGAGACCACATTGGAAGAGGAATCTTCAGGAGTGCAAGAGGGAAAGTGAAGAGTGCTAGAAGGCAAGTGAGGAATGCAGTTCCAATTATTTATAGATCAAATGTTTTGTATATAACTTGCTACATTTGCATTGTTTTCTTAATTTATTTCGTTCAATTTCTTTCATTTTATCTTCTTGTTTCAATAATTCAGATTTCTCCTTTAACCCTTATGTGGTGATCTAGGTTCGTGATCTCCAATCAAATAAGTTAGAGCTTCGCTTTAGGCCTGAGGACTCATATTCACATCCAACACACGGAGAGCTTCGTCCATGCAGTTGTTTTCTTTTGAAAATACGTGAGTACATGTACCTTTATTTATTTATTTATTTAGTATTATTATTATTATTATTTTATTTTATTTTATTTTATTTTATTTTTTTGAGATTTGAAGCATACAAAATAACTAACTCAAGAATTGATATGATGAAAGGTCACCCAAAAAGTGATTCTACTGAGGGAATCAAGAATGTTGAAAAAGAAGTACCTAGAGAAGATGAAATAAACCTGGACTTTGAGATGGTTGCTTGCGTGCCTGAAGCATATCATTTTGAGGGTTTGTTGTGATTTTCATTATCTTGTGCTAAGTCTTATGATTTAGGTTTTTGGGTCATATCTGAATATCTATAAGTTCTCTATTCTAATGTTTATTTCAATTTATTTTAAGGCATGGCTGACTACCAACATGTTGTTGCTACTCATGCGGATGCCACCAAGAGGAAGAAGGGGAATTGGACAGAAATGCACGAGCCATGTTTAGGTGTTATTTTTGTATTTAATGTGCATATTATTATTCATTTGAGAGGGACACATGGCTGCTATGAATTGTCATAAATTTATTAATGAGTAAATGGTAAATTTGATTTATGCAGGGAAGGTTAATGCCATTGATGTGGACAAGGAGGATACTATGATTTTAGTTCCTCCAGTATTTGCGTTGAAGGATGTGCCTGAAAGTTTAGTGTAAGGATCTTTTACGTCTATCATTTGGTTATATTAAGTATCTATTCTTTATTTGTACGGTTCAGACATACCTCATAATTTTTTTTTATTATACAATATTAATTTTTTCTGCAATGGTAAGTAAATTTAAATAATCCAGACTATTTGTGAGAGTTTTATCAAATCATAGGGACCATTTATGAGATTTTATCAAACATAAGGATGAAATTCGAACTTTTAAAGCCGTAGGGACTAAATTCTAACTTTCCTGAAACCATAGTATCAAATTTGTAATTTATCTAACATATTACTATTTTGTTTTATTTTGTAGGTTAAAAACACCTTCCATGTTTACTCCAAGAAAGAAACAAGAAACTCCACATACTCCTTGTGAGGTAAAAGCTTTCTTGCATCTAAACGAAGAGTAGAGATTTATTTACTATCTATATTATTATTATTTTTATGTGCTATTGGTTTTCTCATGTATGTGTCTTCCATGTATTTGTATTTTGTATTGGATGCAATTAAATAATGATTTGTATATTGGCCATTTGCAAGTGTTATAGCCATTACGAAGATGATTTTGACTAATATGCTTGTTTCCATGTTTTGCAGGTGGATATAGAACCTGTTCTTGCAATTGATTTTAACATTAAAGATATCCTTGTTTACTTATCTGCTACTAGATTTTATTTATGAAATTTTATTTTCTCTATTCCTGCGAAAAATTAATAATATATTTTGGTTGCAGGAGTATTTCTGGTTTCCCTTCAGCCACTTTTCATGCATTTTACTTGTGAAATTTACAGTATGATAAGTGATGTACATGATAAATATCAATTTTTTTTTTATTGAGTTGTATTAAATAGACCATTTAAAATTTCTTGATTGGATCACACCAAGTTTAAATCAATTATGGGGAAAAAATGATAAGTAAAACACCAAACACTGAATTAAAGAAAAAATAAAAAACCAAACCAATGCGTACATAATTCCAAGAATAATTCTGAAAAATTGGCCATCTAGATTTTGTTGAATCTTCAGTCATTCGTAGGTTTCTTTCATGAACTGATCTATTTAAGATTATTATTTCTCTATGTTCATCTGTAGGTTTGATACTGCGTGTCTTTATGCTCCTAAAAGTCTTGAGGTTTTCTAAGAGTTGAATTTGTTTACGTGAACCTTGAAAGCAGCCTTTTCTTTTTGTTGTACCTTCTTTTATTGGACTTAACATTCTTACATATTCCAAAGACTGTAATCTGGGAGAAATTCGTACCCCAAGGGTCAGAGGAATGGGATTTTCAAGTTGCTGTGTCTAATTTGTTCGAGGAACGTCCTATATGGCCGAAGGAGTCTCTAGTCGAACGAATGCTGAAGATGGGCTTAGTTTTTAGACATGGAGTGTTTAGAAGGTTTTGACCTCCATGCTACTTTCTGTCCATAATTTTTTTCTTTTTATCATCCATAGATAGAACTCGTGTTTGTGTTGTCTTAATTCTTTTTTCAATGTGCAGGCTTCTTTCTAGAATTGCATATTACTTTTCCAGTGGACCTTTCCAACGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCAAGTGAGCACTTTGCTTAAATGATAGCAGCTTTTTATATTTTAGTTTCTTCCCTTCGTTCCTCGGATAATTGTATGTAAATACATTCCATGGCTAAGAAATAAACCTGACTTGTAGTTGGGTTTTACTGATTTATGGTTCTTTCTAGGGACACGGTTAACGACATCTCAATTAAGAAGTAACTTGCATCATCTCAATATGATGATAAACACCACGTTTATTAACAAATATAAACACCATATAAGAAATCATAAAAATCATTTAAGTTATAAATTGACTGTTCTGGATTATTTATTGACGTTTTCATTATAACAGATACCAACGGATTGATTTTCGAGTACCACAGTCATTACGAAGTTACTGCAATTCCAATGCTTCCGATGAGTAAGTTTGCTTTTACCATAAATTCTATACAACATAAGGCAATAAGAACCAGAATTTCATAGCAACGCATTGGACCTATGCTGATTGGTATTGAAATAGTTTTTCTTTTGTTACCTCATCATTTATGTGTTTCAATTTTTCCTTTCACACAGGATGAGTTACGCACATGAAAAGATATGTGCATTTCAAGTTTTTCCTCACAAGTTTCAAACATCATTACAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAAAAAGCCCTCCGAGGAAACATCTTGTTCAGTGAGTTTACCCTCAAATATCACCTTTTACCTTTCTGAATATTATTCGTTTAAATGAAATGGAAAAAAAGTATGCTCATCTTAACTGGATAGAAGCGAAGAGAAAATGGCTGGATGTTTCCCTCAATTTATCAAGTTTTCTAGTTTTATTATCAAATTTCTCAATTTTGAAATTCCATTAGTAGCAACTTCACGCATCTCTTGGTGTAATTATTTTTTATAATACTTATCTAAAATTCAAAATCTTACTAATGTTCTTGCAACTAAATGTGGTAGGGTATGTGGTTGTCATGTGAGATTAGTCAAGTGCACTCAAGTTGGTATAGAAACTCTTGGATATTGGAAAAAATATTGCTTAGAACACTCAACTAAGAAGCATTGACTATGTTAAACATCACTTCCACACTTTCTTCGGGACTCAAAATGCAATTGTATGACACTTGTTCTCACTCTTGAGTAAGTCAGCCGATTCAAATTTGGAATGCCAATGATAAAATAGGCCTTTCTTGCAACCTCCACCTCTTGAGCAAGTCAGCTGACTCAAATTTAGAATGCCAACGACAGAATAGGCCTTTCTTGCAACCTCCACCCCATTTTTGCGAAAATGATTTTAGAGCCAGAGTTAGATAAAAGATTTTTGAAATCATTGGAAAACATTTGTTATATGCTTTAAAGCGAATAGAATAAACAAGAGCTTCGATAGCATATAACAAATGTAGAAATAATCAACAGCTAGTTACATTTCTCTATAGTACATTTTGAGGCAAATTGCCTTTCACAAGAATAAACTTCGAAAATGGCAAGAAGTCCTATGGCAATAAAAAAACAAGGAAACTTAACTATTATGTTAAATGAAAGGCACACATGAAAGCACGGTAAGGGTTGGAATGAGTATGCAATCACATGCAACATGCTCTAGATATGTATGACCATAGTACTAGAAATGCTCTGGACATGTGGCTGATGTACAAAAAAATGTGATTTTATTATTAGTGATATTTGTTATCCAAGCAACTGACTTGTGATTTCAAAATAGATTATTAGGACCTCTAAAAAAAAGTAAAAGAAATGAACTCCAAATTAATTGGGACCTCTAAAACGTCAATGGAAACTCCGATTGTATACAGTAGAAGAAAGCTTAAAGGTCCTTCAATTGAGAAGGTGTTTTTGTAAATTATTGAGGATACAGAATGAGAGATCTTGAGTTCAGCAATTATTTAGGCCTCAATCGAAGTCAATGAACAAGTGAAAGTCATTTTAGAATGTTTTGTTTCTTTCCTTTATGTAGCTTTTCATCAGGTTTCTTATAAAAAAATAGAACTGAGTATAGTTATCTGTCATGCAAATAAATTAAGGATGTTTCTATCCGGCGGGTTACTTGTGCTTGAAGATTTATTTAGGGAATCTCCCAAATCATTGGGAGATAGACAATTTTGATTATATTGAGGAATGATGTCACCACGTGCAGTGTGGAAGATCCTTGAACAATTTTAGTTCTTTTTCAGTTTGTTTCTTGCTTTAAAGAACAAGGGGGAAAAAAAAAAGAAGACTTTTTTGTTAGGTTATAGTATTCTTTCTTGTTTTCTATCCAGAAAGAGGAAGGAAATTTAGAACACTTCATTAGACTTCCTTTGCATTTTTTTATGAAAATTATAAATATGCTATCGTTCGTTTGGGATCTGAATTCACATTTTTTTGCACATGCAGTATGAATCCGGATGGTTTTCTCTGCGTATCCTAAATTGTTTACGACAACGAATCATGATGAGGTTTTTATTAGTGTTCCCAACGGCAGATGCTGAACCTTTACTCAGAGCAGCCTCTGAAAACTTTGAAAAGTTGAAGAGGGATATTAAAAAGGGCTGCTTAAAAGTTGATCTGGGCGGGGACCATCAAGCCAATGCAGGTTTAAATTAAAACTCAACACTCTCTTTTTGTGTGTGTGTTTCCCTGTGTTGACCTTTTTTCTTTTTAAATCATTTTTTCCGTTTGGGAAAGAAACATAGCATGAATGCATGATTGAAAGTAAAATTTCCAGAAACAGTTGATAGGAGAATAGAAATCTAGCTATCAAATTGAAACATAGAGATGGTAGAACAACGACTTATTAAGAGAGACAGAAGAGTATTAACGTGGAAAAAACCATAAGTTCCAGAAATAATATGTTTTCATATTAAGAAGAAAGTAGGCTTTATGTTGCTTCTAGTTTTCGTTGTGCGACTTCCTTTACTTTTTGTGCATTTAATTAACTTTTGATTAATGAATTGAGGAAAGTTTAATCTATTTGTGAATTTAAACTTATTTTGGAGTGAAATAATAGTGGAAATCAATGGGGGATGTATAGAGATATTATGTTGGGAACAGGTAGAAAGAGCAATGTAAGATAATTTCATAGAAACTAAATATTTTTCCCTTCACTAGTCATAGTACAATGTAAAATTACATAAATAACTAACATATTACAGTAACAATAACATATATGTTAACCCCTTCCCAAGTTGTCTCAAGAAGTTCCTAGCAAAATTAGGTTATTGAACATATTGACCCATTTCCCCAATAAAAAAATAAAAAAATACCTCCACATCCCAAGGCAAGGAACGTTATTAGAGATTTCCCAAGGCAAGGAACGTTATTAGAGATTTCTTGTAATGATTAGTTACTAATTTTTGAACCTCAAAATTTTTAATCTCCACCCTTTTCTCTTATAAAATAAGAGAACTAACCAAGCCCTAATAGTCAAGGACCATAATAAAGGGCTTAGCGAGAATGGGTTCAGTTCAAGACCAGGTAGCCATACATAGATTGAATTTCTGAGTTTTCTTGACAACCAAGTAGTAGGGTTAGACGGTTGTTCAATGAGAATAGTCATGGTGCATTTCAGCTGGTCTGGACCTTCACGAATATTAAAGAAATTAACAGTAATAATGAACTATTTTTCCCTTGTTGGTTCTGATAACAATACTTTTCAAAATTCAGTGAAGTGTATCCAAAGGTTTTGAGAATAAAGAGCCTTATTGATTGGAGTGCTTTGGTATTTCCAGAATAAAAACTTCGTAATGGCGTTCTTGTTCTAAATTGTTCATTGATTATGCTTTTCATGATATTTGAGTTAATTGATTACTTCAATAAATAGTTTTTTCACTTCTCGATAAGAAAATAAACAACACCACGTCTCTGCTATTTCCAATATTTAGGCTTTGGTTTGTTTGTCAATGGACATGGTCTTAAATGCTGATTGTGTTTTGTAGCTGTGATCAATGATGACAAACTGGAAACTAATTCCGGAGAAGAAGATGAAGATGGCCTAGCAGTTGAGAGCGGCGATGAGGCATTAGATGAATATGACGAATTCAATATGGTAACTGTACAGTTCATCTCATCCCATTCATATATAAATTCCAATGTATCTTCTAAATTTTTCTTATTTTGTAGGTGGGTGACGATGACGAGATCTCTCTGCAGTCACATTCATGTAATTACCCTCCCCCCTTACAAATACCGATTCTTTTTTTGTCAAAGTTTTGTTGTTAGAATTACCTTGCTTGAACAAGATTTGTTCTATAGATTGGACACAATTGCCATGAGTTCTAAAGTTTTGTTGTTAGATCTAAGGGTTGATAGTAGTTGTTTAGACTGCTTGGTTGAGAGAGAGTTTCTCTGTCACCTCATGGTTTTTCTTATCAGATCTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAGTTATTTGGTAGCTTTCCGTCGATGGATGAAGATGACCAAAAATTGGATGATGGAGATGGCAGCGAGGAAGAGTATCAAATATACGAGCAAGATAGTGATATCGACTCTGATGACGATGACTCATAGCTTCCTTTTGTTTTGTTTATTTTTCTCTTGAAGATTGTGGGTTAGTTTAATTTTTCTTGATTAGTTTTGCTTAATTGTAATTTTAATAATTTATCAGTTAGTGATTTAGTATCTCTTTGTAATATCTATTCTTTATCAATCATGATCCTTAAGATCTTCTGGGTGTTTATAATTTCCAAGCATAATGGAAATTTG

mRNA sequence

TCGATAGCGCGGGCCGGGTCGGCTTCTTCCTTCTTCTCCTTCCTCCCCGCGACGGTCTTCTCCTTCTTTGTTCTTCGTGGTTGCAGAAACGGCGATTCCTCCTCCTCTTCTTCGACTTTTTTCGTCGCTCGCCCACGTTCCTTCCTTCCTCTGCTTCAGCCTCTGACCGTCCGGCTTCGTCTACGAGCAAAAGTCGTCTTCGCCAGCTTATGGCCTCGAGTTTCTCCTCGGCGTGCACCGTGATTGCGAAGGTGGATTCTTAACATTGCAAGATCTTCCGTTGGAATCTCTCCCGTGGCGTTGCTTCGACTCCAATAAAAAACACTTGAGGTTTTCACTCTCCTCCTTCAAACTCGCTCTCTCTGATTTGATGAACACCTTGGCCTCTCGAACCTACCGAAATCAAGAAGGAAATCGGGGTGGTTGGTTTACCCACGCCTTCTGTCAGCCTCTGTCCTCCCTCTGGCCAGTGTACGGAATTTAGAATGGGGAAGCTGAAAGACAACACTATCTCAGGGTTCTTACCTACTGCCCAGGTTTTTGCAGTTCATTATCCTGGTTATCCTTCGTCAAAGCGACGGGCAATTGAAACTCTAGGAGGAAAACAATCAATTCTCAAGGTTCGTGATCTCCAATCAAATAAGTTAGAGCTTCGCTTTAGGCCTGAGGACTCATATTCACATCCAACACACGGAGAGCTTCGTCCATGCAGTTGTTTTCTTTTGAAAATACGTCACCCAAAAAGTGATTCTACTGAGGGAATCAAGAATGTTGAAAAAGAAGTACCTAGAGAAGATGAAATAAACCTGGACTTTGAGATGGTTGCTTGCGTGCCTGAAGCATATCATTTTGAGGGCATGGCTGACTACCAACATGTTGTTGCTACTCATGCGGATGCCACCAAGAGGAAGAAGGGGAATTGGACAGAAATGCACGAGCCATGTTTAGGGAAGGTTAATGCCATTGATGTGGACAAGGAGGATACTATGATTTTAGTTCCTCCAGTATTTGCGTTGAAGGATGTGCCTGAAAGTTTAGTGTTTGATACTGCGTGTCTTTATGCTCCTAAAAGTCTTGAGACTGTAATCTGGGAGAAATTCGTACCCCAAGGGTCAGAGGAATGGGATTTTCAAGTTGCTGTGTCTAATTTGTTCGAGGAACGTCCTATATGGCCGAAGGAGTCTCTAGTCGAACGAATGCTGAAGATGGGCTTAGTTTTTAGACATGGAGTGTTTAGAAGGCTTCTTTCTAGAATTGCATATTACTTTTCCAGTGGACCTTTCCAACGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCAAATACCAACGGATTGATTTTCGAGTACCACAGTCATTACGAAGTTACTGCAATTCCAATGCTTCCGATGAGATGAGTTACGCACATGAAAAGATATGTGCATTTCAAGTTTTTCCTCACAAGTTTCAAACATCATTACAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAAAAAGCCCTCCGAGGAAACATCTTGTTCATATGAATCCGGATGGTTTTCTCTGCGTATCCTAAATTGTTTACGACAACGAATCATGATGAGGTTTTTATTAGTGTTCCCAACGGCAGATGCTGAACCTTTACTCAGAGCAGCCTCTGAAAACTTTGAAAAGTTGAAGAGGGATATTAAAAAGGGCTGCTTAAAAGTTGATCTGGGCGGGGACCATCAAGCCAATGCAGCTGTGATCAATGATGACAAACTGGAAACTAATTCCGGAGAAGAAGATGAAGATGGCCTAGCAGTTGAGAGCGGCGATGAGGCATTAGATGAATATGACGAATTCAATATGGTGGGTGACGATGACGAGATCTCTCTGCAGTCACATTCATATCTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAGTTATTTGGTAGCTTTCCGTCGATGGATGAAGATGACCAAAAATTGGATGATGGAGATGGCAGCGAGGAAGAGTATCAAATATACGAGCAAGATAGTGATATCGACTCTGATGACGATGACTCATAGCTTCCTTTTGTTTTGTTTATTTTTCTCTTGAAGATTGTGGGTTAGTTTAATTTTTCTTGATTAGTTTTGCTTAATTGTAATTTTAATAATTTATCAGTTAGTGATTTAGTATCTCTTTGTAATATCTATTCTTTATCAATCATGATCCTTAAGATCTTCTGGGTGTTTATAATTTCCAAGCATAATGGAAATTTG

Coding sequence (CDS)

ATGGGGAAGCTGAAAGACAACACTATCTCAGGGTTCTTACCTACTGCCCAGGTTTTTGCAGTTCATTATCCTGGTTATCCTTCGTCAAAGCGACGGGCAATTGAAACTCTAGGAGGAAAACAATCAATTCTCAAGGTTCGTGATCTCCAATCAAATAAGTTAGAGCTTCGCTTTAGGCCTGAGGACTCATATTCACATCCAACACACGGAGAGCTTCGTCCATGCAGTTGTTTTCTTTTGAAAATACGTCACCCAAAAAGTGATTCTACTGAGGGAATCAAGAATGTTGAAAAAGAAGTACCTAGAGAAGATGAAATAAACCTGGACTTTGAGATGGTTGCTTGCGTGCCTGAAGCATATCATTTTGAGGGCATGGCTGACTACCAACATGTTGTTGCTACTCATGCGGATGCCACCAAGAGGAAGAAGGGGAATTGGACAGAAATGCACGAGCCATGTTTAGGGAAGGTTAATGCCATTGATGTGGACAAGGAGGATACTATGATTTTAGTTCCTCCAGTATTTGCGTTGAAGGATGTGCCTGAAAGTTTAGTGTTTGATACTGCGTGTCTTTATGCTCCTAAAAGTCTTGAGACTGTAATCTGGGAGAAATTCGTACCCCAAGGGTCAGAGGAATGGGATTTTCAAGTTGCTGTGTCTAATTTGTTCGAGGAACGTCCTATATGGCCGAAGGAGTCTCTAGTCGAACGAATGCTGAAGATGGGCTTAGTTTTTAGACATGGAGTGTTTAGAAGGCTTCTTTCTAGAATTGCATATTACTTTTCCAGTGGACCTTTCCAACGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCAAATACCAACGGATTGATTTTCGAGTACCACAGTCATTACGAAGTTACTGCAATTCCAATGCTTCCGATGAGATGAGTTACGCACATGAAAAGATATGTGCATTTCAAGTTTTTCCTCACAAGTTTCAAACATCATTACAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAAAAAGCCCTCCGAGGAAACATCTTGTTCATATGAATCCGGATGGTTTTCTCTGCGTATCCTAAATTGTTTACGACAACGAATCATGATGAGGTTTTTATTAGTGTTCCCAACGGCAGATGCTGAACCTTTACTCAGAGCAGCCTCTGAAAACTTTGAAAAGTTGAAGAGGGATATTAAAAAGGGCTGCTTAAAAGTTGATCTGGGCGGGGACCATCAAGCCAATGCAGCTGTGATCAATGATGACAAACTGGAAACTAATTCCGGAGAAGAAGATGAAGATGGCCTAGCAGTTGAGAGCGGCGATGAGGCATTAGATGAATATGACGAATTCAATATGGTGGGTGACGATGACGAGATCTCTCTGCAGTCACATTCATATCTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAGTTATTTGGTAGCTTTCCGTCGATGGATGAAGATGACCAAAAATTGGATGATGGAGATGGCAGCGAGGAAGAGTATCAAATATACGAGCAAGATAGTGATATCGACTCTGATGACGATGACTCATAG

Protein sequence

MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRPEDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAYHFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDVPESLVFDTACLYAPKSLETVIWEKFVPQGSEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASENFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQDSDIDSDDDDS

Homology

[Close]

BLAST of CmaCh11G015750 vs. ExPASy Swiss-Prot
Match: Q54GS8 (General transcription factor 3C polypeptide 5 OS=Dictyostelium discoideum OX=44689 GN=gtf3c5 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 7.9e-25
Identity = 91/372 (24.46%), Postives = 161/372 (43.28%), Query Frame = 0


Query: 6   DNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKV-RDLQSNKLELRFRPEDSY 65
           D  I   LPT   + + YP    +  +AIE++GG   I  V +  +   L+L+FRP +  
Sbjct: 33  DKAIIRPLPTKAYYGLEYPANVQNADKAIESVGGLSKISNVIKSREKEYLQLKFRPNNPT 92

Query: 66  SHPTHGELRPCSCFLLKIRHPK-----------SDSTEGI-----------------KNV 125
             PT G   P    LL++R  K            D+ E +                 +  
Sbjct: 93  CKPTFGTKSPTCHLLLRVRPNKQQTQTQTQTQTQDNNEEMNSPKPTIQSPKTTSRSKQQQ 152

Query: 126 EKEVPREDEINLDFEMVACVPEAYHFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGK 185
           +++ P+E+E   D  ++A VP    F+G+ D+Q+++ +  + TK +  N  +       K
Sbjct: 153 QQQQPQENE-KFDATIIALVPSTIRFDGLCDFQYLIKSDNNNTKSESDNVNDSSSSSSSK 212

Query: 186 VNAI----------------DVDKEDTMILVPPVFALKDVPESLVFDT------------ 245
              I                ++ K++ M L+PP+F+  D P++ +F              
Sbjct: 213 TVPITKQKDQYYVQQYSDNNEIMKDEPMNLIPPLFSRIDFPQNYLFKANPNAQFDKTSKQ 272

Query: 246 ---ACLYAPKSLETVIWEKFVPQGSEEWDFQVAVSN-----------LFEERPIWPKESL 305
              A     K+     +   +P   +E      V+            LFE+RPIW   SL
Sbjct: 273 FVFAKQTTRKATGHAKFNNVIPVAPQELPKVFGVNELMKKTRDILVALFEKRPIWLYISL 332

Query: 306 VERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVP 307
           ++++ K G +  H   +R+L  +A+ F  GP+++ W+K G+DPR   ++ +YQ IDFR+ 
Sbjct: 333 LDKVQKEGGLVAH--TKRVLPSLAFNFVDGPWRKCWVKLGFDPRIHPETSQYQTIDFRIS 392

[Close]

BLAST of CmaCh11G015750 vs. ExPASy Swiss-Prot
Match: Q9Y5Q8 (General transcription factor 3C polypeptide 5 OS=Homo sapiens OX=9606 GN=GTF3C5 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-23
Identity = 85/320 (26.56%), Postives = 145/320 (45.31%), Query Frame = 0


Query: 17  QVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRPEDSYSHPTHGELRPCS 76
           ++  V YPG      + + TLGG++ + ++    + +LEL FRP+D Y HP        S
Sbjct: 23  RMVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTKRLELYFRPKDPYCHPVCANRFSTS 82

Query: 77  CFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAYHFEGMADYQHVVATHA 136
             LL+IR  ++   +G+   E       E+  D E++  +   Y F+GM+D+Q+ +A H 
Sbjct: 83  SLLLRIR-KRTRRQKGVLGTE----AHSEVTFDMEILGIISTIYKFQGMSDFQY-LAVHT 142

Query: 137 DATKRKKGNWTEMHEPCLGKVNAIDVDKED------TMILVPPVFALKDVPESLVFDTAC 196
           +A     G  T M++    KV  +  +KE        + + PP+F+  D P    +    
Sbjct: 143 EA----GGKHTSMYD----KVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFYRPET 202

Query: 197 LY------APKSLETVIW----------------EKFVPQ-----GSEEW---------- 256
            +       P S E +I                 ++ VP+      ++ W          
Sbjct: 203 QHREGYNNPPISGENLIGLSRARRPHNAIFVNFEDEEVPKQPLEAAAQTWRRVCTNPVDR 262

Query: 257 DFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKK 294
             +  +  LF+ RPIW + +     +K  +       + LL  IAYY  +GP++  WI+ 
Sbjct: 263 KVEEELRKLFDIRPIWSRNA-----VKANISVHPDKLKVLLPFIAYYMITGPWRSLWIRF 322

[Close]

BLAST of CmaCh11G015750 vs. ExPASy Swiss-Prot
Match: Q8R2T8 (General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-22
Identity = 79/317 (24.92%), Postives = 142/317 (44.79%), Query Frame = 0


Query: 17  QVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRPEDSYSHPTHGELRPCS 76
           ++  V YPG   ++ + ++TLGG++S+ ++    + +LEL FRP+D Y HP        S
Sbjct: 23  RLVCVEYPGVVRNEAKMLQTLGGEESVSRIYTDPTKRLELYFRPKDPYCHPVCANRFSTS 82

Query: 77  CFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAYHFEGMADYQHVVATHA 136
             LL+IR  ++    G+   E       ++  + E++  +   Y F+GM+D+Q+ +A H 
Sbjct: 83  SLLLRIR-KRTRRRRGVLGDE----AHPQVTFNLEIIGIISTIYKFQGMSDFQY-LAVHT 142

Query: 137 DATKRKKGNWTEMHEPCLGKVNAID--VDKEDTMILVPPVFALKDVP------------- 196
           +A     G    M++  L +    +    +E  + + PP+F+  D P             
Sbjct: 143 EA----GGKHVSMYDRVLMRKPEKEEFFHQELPLYIPPPIFSRLDTPVDYFYRPETQHRE 202

Query: 197 ---------ESLV----------------FDTACLYAPKSLETVIWEKFVPQGSEEWDFQ 256
                    E+L+                 DT     P       W+K      ++   +
Sbjct: 203 GYHNPTISGENLIGLSRARRPHNAIFVNFEDTEVPEQPLEAAVQTWKKACTNPIDQ-KVE 262

Query: 257 VAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYD 294
             +  LF+ RP+W + +     +K  +       + LL  +AYY  +GP++  WI+ GYD
Sbjct: 263 EELRKLFDIRPVWSRNA-----VKSNVSVHPDKLKILLPYMAYYMITGPWRSLWIRFGYD 322

[Close]

BLAST of CmaCh11G015750 vs. ExPASy Swiss-Prot
Match: O14229 (Transcription factor tau subunit sfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sfc1 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 7.7e-12
Identity = 104/480 (21.67%), Postives = 194/480 (40.42%), Query Frame = 0


Query: 21  VHYPGYPSSKRRAIETLGGKQSILKV--RDLQSNK---LELRFRPEDSYSHPTHGELRPC 80
           + +PG+ ++K    +TLGG QSI K      Q+ K   LEL  RP+D Y HP    ++  
Sbjct: 14  IEHPGFANNKDAFFQTLGGVQSIQKACQTSFQNPKQALLELNLRPKDKYHHPVQARVQSR 73

Query: 81  SCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAYHFEGMADYQHVVATH 140
           +  L+ I+  K D++  ++NV +                 + + + F  MAD+Q+    +
Sbjct: 74  NDLLVTIK--KMDNS--VQNVSR-----------------IRQVFLFRDMADFQY-STQN 133

Query: 141 ADATKRKKGNWTEMHEPCLGK--VNAIDVDKEDTMILVPPVFALKDVPESLVFDTACLYA 200
           +   ++       +    + K  ++   V ++   +  PPVF+   +P S  F    L  
Sbjct: 134 SPFVQKLDSTLRVLDYNAINKFSIDLTPVQRKHVDMPPPPVFSQTSLPMSYNFLQNPLVG 193

Query: 201 ----PKSLETV--------IWEKFVPQGSEE----------------WDFQVAVSNLFEE 260
               P    T+        +W      G E                  +   A+  LFE+
Sbjct: 194 RVRLPNGKTTIVNLKGQCRVWIITTNMGVESVPTCRHSKLGEPSKTIQEVIEALKPLFEK 253

Query: 261 RPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRK 320
           RP+W + +L+     +   + H   +  L  ++Y ++SGPF+  + + GYDPRKD ++  
Sbjct: 254 RPVWTRRALLNH---LDPSYTH-YLKFALPYLSYLWTSGPFRDTYTRFGYDPRKDSNAAA 313

Query: 321 YQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHK--FQTS--LQLFELEDEYIQ 380
           YQ + F++          N   + +  H       VF  K  F T+   Q+ ++ D  I 
Sbjct: 314 YQALFFKL--------KLNGKHKGTKTH-------VFDGKTLFPTNRVYQVCDIVDPTIA 373

Query: 381 EEIKKPSEETSCSYESGWFS----LRILNCLRQRIMMRFLLVFPTADAEPLLRAASENFE 440
             +K     + C  ++GW+      ++ + +R+++        P+  A  ++  A E  E
Sbjct: 374 PLLKDTQLRSECHRDTGWYRSGRYYKVRDLMREKLFALIEGEMPSEVAVNMILNAEEVEE 433

Query: 441 KLKRDIKKGCLKVDLGGDHQANAAVINDDK---LETNSGEEDEDGLAVESGDEALDEYDE 455
             +          DL    +       DD+   L  N  +  ++    E  +E  D+YD+
Sbjct: 434 SDRYSNFDEQDNTDLNDTVRGLNTSATDDRINDLMRNLMKRSQEHEGFEDLEEIDDDYDD 452

[Close]

BLAST of CmaCh11G015750 vs. ExPASy TrEMBL
Match: A0A6J1JKL2 (general transcription factor 3C polypeptide 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486648 PE=4 SV=1)

HSP 1 Score: 1021.1 bits (2639), Expect = 1.6e-294
Identity = 514/551 (93.28%), Postives = 518/551 (94.01%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
           EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY
Sbjct: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180
           HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180

Query: 181 PESLVFDTACLYAPKSLE--------------------------TVIWEKFVPQGSEEWD 240
           PESLV  T  ++ P+  +                          TVIWEKFVPQGSEEWD
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKDIPKTVIWEKFVPQGSEEWD 240

Query: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300
           FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG
Sbjct: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300

Query: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360
           YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE
Sbjct: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360

Query: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420
           LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE
Sbjct: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420

Query: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480
           NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE
Sbjct: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480

Query: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 526
           FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ
Sbjct: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 540

[Close]

BLAST of CmaCh11G015750 vs. ExPASy TrEMBL
Match: A0A6J1EPX9 (general transcription factor 3C polypeptide 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434581 PE=4 SV=1)

HSP 1 Score: 994.2 bits (2569), Expect = 2.1e-286
Identity = 501/551 (90.93%), Postives = 511/551 (92.74%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRA+ETLGGKQSILKVRDLQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAVETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
           ED YSHPTHGELRPCSCFLLKI HPKSDSTEGIK VEKEVPREDEINLDFEMVACVPEAY
Sbjct: 61  EDPYSHPTHGELRPCSCFLLKICHPKSDSTEGIKKVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180
           HFEGMADYQHVVATHADATKRKKG+WTEMHEPCLGKVNAIDVDKEDTMILVPP+FALKDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGSWTEMHEPCLGKVNAIDVDKEDTMILVPPLFALKDV 180

Query: 181 PESLVFDTACLYAPKSLE--------------------------TVIWEKFVPQGSEEWD 240
           PESLV  T  ++ P+  +                          TVIWEK+VPQGSEEWD
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKDIPKTVIWEKYVPQGSEEWD 240

Query: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300
           +QVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG
Sbjct: 241 YQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300

Query: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360
           YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNAS+EMSYAHEKICAFQVFPHKFQTSLQLFE
Sbjct: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASNEMSYAHEKICAFQVFPHKFQTSLQLFE 360

Query: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420
           LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE
Sbjct: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420

Query: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480
           NFEKLKRDIKKGCLKVD GGDHQAN AVINDDKLE NSG EDEDGLAVESGDEALDEYDE
Sbjct: 421 NFEKLKRDIKKGCLKVDQGGDHQANPAVINDDKLEANSG-EDEDGLAVESGDEALDEYDE 480

Query: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 526
           FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ
Sbjct: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 540

[Close]

BLAST of CmaCh11G015750 vs. ExPASy TrEMBL
Match: A0A1S4E516 (general transcription factor 3C polypeptide 5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502764 PE=4 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 8.0e-230
Identity = 416/562 (74.02%), Postives = 460/562 (81.85%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLP AQ FAVHYPGYPSSK RAIE+LGG QSILKVR LQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPAAQNFAVHYPGYPSSKHRAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
            D YSHPT+GELRPCSC LLKI H K D+ EGI  VE  VP EDE+NLDFEMVA VPEAY
Sbjct: 61  ADPYSHPTYGELRPCSCLLLKICHSKCDTNEGIMKVE-NVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGK-VNAIDVDKEDTMILVPPVFALKD 180
           HFEGM DYQHVVA HADAT RKKGNW EMHEP LGK  NA+DVDKEDTMILVPP+F++KD
Sbjct: 121 HFEGMVDYQHVVAVHADATWRKKGNWAEMHEPRLGKGNNAVDVDKEDTMILVPPLFSIKD 180

Query: 181 VPESLVFDTACLYAPKSL------------------------------ETVIWEKFVPQG 240
           VPE+LV  T  +Y P+                                +TVIWEK+VPQG
Sbjct: 181 VPENLVLKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDIPKTVIWEKYVPQG 240

Query: 241 SEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRF 300
           S+EWDFQVAVS LFEERPIWPK+SLV+RML MGL F HGV RRLLSRIAYYFSSGPFQRF
Sbjct: 241 SDEWDFQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLRRLLSRIAYYFSSGPFQRF 300

Query: 301 WIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTS 360
           WIKKGYDPRKD +SR YQRIDFRVP SLRSYCNS+AS ++ Y H  ICAFQVFP KFQTS
Sbjct: 301 WIKKGYDPRKDRNSRIYQRIDFRVPVSLRSYCNSSASSKLCYGHAGICAFQVFPRKFQTS 360

Query: 361 LQLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLL 420
           LQLFEL+DEYIQEEI+KPSEE SCSYESGWFS+R LNC+RQRIMMRFL VFPTA AE LL
Sbjct: 361 LQLFELQDEYIQEEIRKPSEEASCSYESGWFSMRTLNCIRQRIMMRFLSVFPTAGAEALL 420

Query: 421 RAASENFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKL------ETNSGEEDEDGLAVE 480
            AASENFEKLKR+ +K C KVD   +H+ANA VI+DDKL      E ++ E++EDGL VE
Sbjct: 421 TAASENFEKLKREDRKDCSKVDQEEEHEANAVVIHDDKLDDASYAEEDAEEDEEDGLGVE 480

Query: 481 SGDEALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQK-LDDG 525
           SG+EALD YD+FNMVGDDDE SLQSHSYL+M+D+SRTHLQELFGSFPS+DED +K +DDG
Sbjct: 481 SGNEALDAYDDFNMVGDDDEFSLQSHSYLSMEDISRTHLQELFGSFPSLDEDGEKMMDDG 540

[Close]

BLAST of CmaCh11G015750 vs. ExPASy TrEMBL
Match: A0A0A0KV91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630700 PE=4 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 6.3e-227
Identity = 414/575 (72.00%), Postives = 457/575 (79.48%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQ FAVHYP YPSSK +AIE+LGG QSILKVR LQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQNFAVHYPSYPSSKHQAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
            D YSHPT+GELRPCS FLLKI H KSD+ EGI  VE EVP EDE+NLDFEMVA VPEAY
Sbjct: 61  ADPYSHPTYGELRPCSGFLLKICHSKSDTNEGIMKVE-EVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180
           HFEGM DYQHVVA HADAT+RKKGNW EMHEP LGK NAIDVDKEDTMILVPP+F++KDV
Sbjct: 121 HFEGMVDYQHVVAVHADATQRKKGNWAEMHEPRLGKSNAIDVDKEDTMILVPPLFSIKDV 180

Query: 181 PESLVFDTACLYAPKSL------------------------------------------- 240
           PE+LV  T  +Y P+                                             
Sbjct: 181 PENLVLKTPAIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDILVNLEHNLFLLLDL 240

Query: 241 ------ETVIWEKFVPQGSEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFR 300
                 +TVIWEK+VPQGS+EWD+QVAVS LFEERPIWPK+SLV+RML MGL F HGV R
Sbjct: 241 TFLHIPKTVIWEKYVPQGSDEWDYQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLR 300

Query: 301 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSY 360
           RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+ YQRIDFRVP SLRSYCNSNAS+E+ Y
Sbjct: 301 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSKIYQRIDFRVPVSLRSYCNSNASNELCY 360

Query: 361 AHEKICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQR 420
            H  I AFQVFP KFQTSLQLFEL+DEYIQEEI+KPSEE  CSYESGWFSLRILNC+RQR
Sbjct: 361 GHAGISAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEALCSYESGWFSLRILNCIRQR 420

Query: 421 IMMRFLLVFPTADAEPLLRAASENFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETN 480
           IMMRFL VFPTA AE LL AASE+FEKLKR  +K C KVD   +H+ANA   +DDKL+ +
Sbjct: 421 IMMRFLSVFPTAGAEALLTAASESFEKLKRGDRKDCSKVDQEEEHEANAVANHDDKLDAS 480

Query: 481 SGEED-EDGLAVESGDEALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFP 525
             EED EDG+ VESG+EALD YD+FNMVGDDDE SL SHSYL M+DVSRTHLQELFGSFP
Sbjct: 481 YAEEDEEDGIGVESGNEALDAYDDFNMVGDDDEFSLHSHSYLGMEDVSRTHLQELFGSFP 540

[Close]

BLAST of CmaCh11G015750 vs. ExPASy TrEMBL
Match: A0A1S3CMW8 (general transcription factor 3C polypeptide 5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502764 PE=4 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 7.8e-225
Identity = 411/562 (73.13%), Postives = 455/562 (80.96%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLP AQ FAVHYPGYPSSK RAIE+LGG QSILKVR LQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPAAQNFAVHYPGYPSSKHRAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
            D YSHPT+GELRPCS       H K D+ EGI  VE  VP EDE+NLDFEMVA VPEAY
Sbjct: 61  ADPYSHPTYGELRPCS-------HSKCDTNEGIMKVE-NVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGK-VNAIDVDKEDTMILVPPVFALKD 180
           HFEGM DYQHVVA HADAT RKKGNW EMHEP LGK  NA+DVDKEDTMILVPP+F++KD
Sbjct: 121 HFEGMVDYQHVVAVHADATWRKKGNWAEMHEPRLGKGNNAVDVDKEDTMILVPPLFSIKD 180

Query: 181 VPESLVFDTACLYAPKSL------------------------------ETVIWEKFVPQG 240
           VPE+LV  T  +Y P+                                +TVIWEK+VPQG
Sbjct: 181 VPENLVLKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDIPKTVIWEKYVPQG 240

Query: 241 SEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRF 300
           S+EWDFQVAVS LFEERPIWPK+SLV+RML MGL F HGV RRLLSRIAYYFSSGPFQRF
Sbjct: 241 SDEWDFQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLRRLLSRIAYYFSSGPFQRF 300

Query: 301 WIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTS 360
           WIKKGYDPRKD +SR YQRIDFRVP SLRSYCNS+AS ++ Y H  ICAFQVFP KFQTS
Sbjct: 301 WIKKGYDPRKDRNSRIYQRIDFRVPVSLRSYCNSSASSKLCYGHAGICAFQVFPRKFQTS 360

Query: 361 LQLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLL 420
           LQLFEL+DEYIQEEI+KPSEE SCSYESGWFS+R LNC+RQRIMMRFL VFPTA AE LL
Sbjct: 361 LQLFELQDEYIQEEIRKPSEEASCSYESGWFSMRTLNCIRQRIMMRFLSVFPTAGAEALL 420

Query: 421 RAASENFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKL------ETNSGEEDEDGLAVE 480
            AASENFEKLKR+ +K C KVD   +H+ANA VI+DDKL      E ++ E++EDGL VE
Sbjct: 421 TAASENFEKLKREDRKDCSKVDQEEEHEANAVVIHDDKLDDASYAEEDAEEDEEDGLGVE 480

Query: 481 SGDEALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQK-LDDG 525
           SG+EALD YD+FNMVGDDDE SLQSHSYL+M+D+SRTHLQELFGSFPS+DED +K +DDG
Sbjct: 481 SGNEALDAYDDFNMVGDDDEFSLQSHSYLSMEDISRTHLQELFGSFPSLDEDGEKMMDDG 540

[Close]

BLAST of CmaCh11G015750 vs. NCBI nr
Match: XP_022989615.1 (general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989616.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989617.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989618.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima])

HSP 1 Score: 1021.1 bits (2639), Expect = 3.3e-294
Identity = 514/551 (93.28%), Postives = 518/551 (94.01%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
           EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY
Sbjct: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180
           HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180

Query: 181 PESLVFDTACLYAPKSLE--------------------------TVIWEKFVPQGSEEWD 240
           PESLV  T  ++ P+  +                          TVIWEKFVPQGSEEWD
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKDIPKTVIWEKFVPQGSEEWD 240

Query: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300
           FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG
Sbjct: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300

Query: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360
           YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE
Sbjct: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360

Query: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420
           LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE
Sbjct: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420

Query: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480
           NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE
Sbjct: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480

Query: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 526
           FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ
Sbjct: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 540

[Close]

BLAST of CmaCh11G015750 vs. NCBI nr
Match: KAG7022593.1 (General transcription factor 3C polypeptide 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1016.1 bits (2626), Expect = 1.1e-292
Identity = 507/531 (95.48%), Postives = 516/531 (97.18%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRA+ETLGGKQSILKVRDLQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAVETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIR------HPKSDSTEGIKNVEKEVPREDEINLDFEMVA 120
           ED YSHPTHGELRPC+  +   R      HPKSDSTEGIK VEKEVPREDEINLDFEMVA
Sbjct: 61  EDPYSHPTHGELRPCTYKITNSRIDMMKGHPKSDSTEGIKKVEKEVPREDEINLDFEMVA 120

Query: 121 CVPEAYHFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPV 180
           CVPEAYHFEGMADYQHVVATHADATKRKKG+WTEMHEPCLGKVNAIDVDKEDTMILVPP+
Sbjct: 121 CVPEAYHFEGMADYQHVVATHADATKRKKGSWTEMHEPCLGKVNAIDVDKEDTMILVPPL 180

Query: 181 FALKDVPESLVFDTACLYAPKSLETVIWEKFVPQGSEEWDFQVAVSNLFEERPIWPKESL 240
           FALKDVPESLVFDTACLYAPKSLETVIWEK+VP+GSEEWD+QVAVSNLFEERPIWPKESL
Sbjct: 181 FALKDVPESLVFDTACLYAPKSLETVIWEKYVPRGSEEWDYQVAVSNLFEERPIWPKESL 240

Query: 241 VERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVP 300
           VERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVP
Sbjct: 241 VERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVP 300

Query: 301 QSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 360
           QSLRSYCNSNAS+EMSYAHEKICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS
Sbjct: 301 QSLRSYCNSNASNEMSYAHEKICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 360

Query: 361 YESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASENFEKLKRDIKKGCLKVDLGG 420
           YESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASENFEKLKRDIKKGCLKVD GG
Sbjct: 361 YESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASENFEKLKRDIKKGCLKVDQGG 420

Query: 421 DHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDEFNMVGDDDEISLQSHSYLNM 480
           DHQANAAVINDDKLE NSGEEDEDGLAVESGDEALDEYDEFNMVGDDDEISLQSHSYLNM
Sbjct: 421 DHQANAAVINDDKLEANSGEEDEDGLAVESGDEALDEYDEFNMVGDDDEISLQSHSYLNM 480

Query: 481 DDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQDSDIDSDDDDS 526
           DDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQDSDIDSDDDDS
Sbjct: 481 DDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQDSDIDSDDDDS 531

[Close]

BLAST of CmaCh11G015750 vs. NCBI nr
Match: XP_023530657.1 (general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo] >XP_023530658.1 general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo] >XP_023530659.1 general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 998.4 bits (2580), Expect = 2.3e-287
Identity = 501/551 (90.93%), Postives = 511/551 (92.74%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRA+ETLGGKQSILKVRDLQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAVETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
           ED YSHPTHGELRPCSCFLLKI HPKSDSTEGIK VEKEVPREDEINLDFEMVACVPEAY
Sbjct: 61  EDPYSHPTHGELRPCSCFLLKICHPKSDSTEGIKKVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180
           HFEGMADYQHVVATHADATKRKKG+WTE+HEPCLGKVNAIDVDKEDTMILVPP+FALKDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGSWTELHEPCLGKVNAIDVDKEDTMILVPPLFALKDV 180

Query: 181 PESLVFDTACLYAPKSLE--------------------------TVIWEKFVPQGSEEWD 240
           PESLV  T  ++ P+  +                          TVIWEK+VPQGSEEWD
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKDIPKTVIWEKYVPQGSEEWD 240

Query: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300
           FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG
Sbjct: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300

Query: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360
           YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNAS+EMSYAHEKICAFQVFPHKFQTSLQLFE
Sbjct: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASNEMSYAHEKICAFQVFPHKFQTSLQLFE 360

Query: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420
           LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE
Sbjct: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420

Query: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480
           NFEKLKRD KKGCLKVD GGDHQAN AVINDDKLE NSGEEDEDGLAVESGDEALDEYDE
Sbjct: 421 NFEKLKRDFKKGCLKVDQGGDHQANPAVINDDKLEANSGEEDEDGLAVESGDEALDEYDE 480

Query: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 526
           FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ
Sbjct: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 540

[Close]

BLAST of CmaCh11G015750 vs. NCBI nr
Match: XP_022927790.1 (general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_022927791.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_022927792.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_022927793.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata])

HSP 1 Score: 994.2 bits (2569), Expect = 4.3e-286
Identity = 501/551 (90.93%), Postives = 511/551 (92.74%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRA+ETLGGKQSILKVRDLQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAVETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
           ED YSHPTHGELRPCSCFLLKI HPKSDSTEGIK VEKEVPREDEINLDFEMVACVPEAY
Sbjct: 61  EDPYSHPTHGELRPCSCFLLKICHPKSDSTEGIKKVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180
           HFEGMADYQHVVATHADATKRKKG+WTEMHEPCLGKVNAIDVDKEDTMILVPP+FALKDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGSWTEMHEPCLGKVNAIDVDKEDTMILVPPLFALKDV 180

Query: 181 PESLVFDTACLYAPKSLE--------------------------TVIWEKFVPQGSEEWD 240
           PESLV  T  ++ P+  +                          TVIWEK+VPQGSEEWD
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKDIPKTVIWEKYVPQGSEEWD 240

Query: 241 FQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300
           +QVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG
Sbjct: 241 YQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFWIKKG 300

Query: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSLQLFE 360
           YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNAS+EMSYAHEKICAFQVFPHKFQTSLQLFE
Sbjct: 301 YDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASNEMSYAHEKICAFQVFPHKFQTSLQLFE 360

Query: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420
           LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE
Sbjct: 361 LEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLRAASE 420

Query: 421 NFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDEALDEYDE 480
           NFEKLKRDIKKGCLKVD GGDHQAN AVINDDKLE NSG EDEDGLAVESGDEALDEYDE
Sbjct: 421 NFEKLKRDIKKGCLKVDQGGDHQANPAVINDDKLEANSG-EDEDGLAVESGDEALDEYDE 480

Query: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 526
           FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ
Sbjct: 481 FNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQKLDDGDGSEEEYQIYEQ 540

[Close]

BLAST of CmaCh11G015750 vs. NCBI nr
Match: XP_008465056.1 (PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo] >XP_008465057.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo] >XP_016903319.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo])

HSP 1 Score: 806.2 bits (2081), Expect = 1.7e-229
Identity = 416/562 (74.02%), Postives = 460/562 (81.85%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MGKLKDNTISGFLP AQ FAVHYPGYPSSK RAIE+LGG QSILKVR LQSNKLELRFRP
Sbjct: 1   MGKLKDNTISGFLPAAQNFAVHYPGYPSSKHRAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120
            D YSHPT+GELRPCSC LLKI H K D+ EGI  VE  VP EDE+NLDFEMVA VPEAY
Sbjct: 61  ADPYSHPTYGELRPCSCLLLKICHSKCDTNEGIMKVE-NVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGK-VNAIDVDKEDTMILVPPVFALKD 180
           HFEGM DYQHVVA HADAT RKKGNW EMHEP LGK  NA+DVDKEDTMILVPP+F++KD
Sbjct: 121 HFEGMVDYQHVVAVHADATWRKKGNWAEMHEPRLGKGNNAVDVDKEDTMILVPPLFSIKD 180

Query: 181 VPESLVFDTACLYAPKSL------------------------------ETVIWEKFVPQG 240
           VPE+LV  T  +Y P+                                +TVIWEK+VPQG
Sbjct: 181 VPENLVLKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDIPKTVIWEKYVPQG 240

Query: 241 SEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRF 300
           S+EWDFQVAVS LFEERPIWPK+SLV+RML MGL F HGV RRLLSRIAYYFSSGPFQRF
Sbjct: 241 SDEWDFQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLRRLLSRIAYYFSSGPFQRF 300

Query: 301 WIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTS 360
           WIKKGYDPRKD +SR YQRIDFRVP SLRSYCNS+AS ++ Y H  ICAFQVFP KFQTS
Sbjct: 301 WIKKGYDPRKDRNSRIYQRIDFRVPVSLRSYCNSSASSKLCYGHAGICAFQVFPRKFQTS 360

Query: 361 LQLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLL 420
           LQLFEL+DEYIQEEI+KPSEE SCSYESGWFS+R LNC+RQRIMMRFL VFPTA AE LL
Sbjct: 361 LQLFELQDEYIQEEIRKPSEEASCSYESGWFSMRTLNCIRQRIMMRFLSVFPTAGAEALL 420

Query: 421 RAASENFEKLKRDIKKGCLKVDLGGDHQANAAVINDDKL------ETNSGEEDEDGLAVE 480
            AASENFEKLKR+ +K C KVD   +H+ANA VI+DDKL      E ++ E++EDGL VE
Sbjct: 421 TAASENFEKLKREDRKDCSKVDQEEEHEANAVVIHDDKLDDASYAEEDAEEDEEDGLGVE 480

Query: 481 SGDEALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDEDDQK-LDDG 525
           SG+EALD YD+FNMVGDDDE SLQSHSYL+M+D+SRTHLQELFGSFPS+DED +K +DDG
Sbjct: 481 SGNEALDAYDDFNMVGDDDEFSLQSHSYLSMEDISRTHLQELFGSFPSLDEDGEKMMDDG 540

[Close]

BLAST of CmaCh11G015750 vs. TAIR 10
Match: AT3G49410.1 (Transcription factor IIIC, subunit 5 )

HSP 1 Score: 436.0 bits (1120), Expect = 4.2e-122
Identity = 252/572 (44.06%), Postives = 355/572 (62.06%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MG +++ TISG LP+ + F VH+PGYPSS  RAIETLGG Q I + R+  SNKLELRFRP
Sbjct: 1   MGIIEEGTISGTLPSKEAFVVHFPGYPSSISRAIETLGGIQGITQARESISNKLELRFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKI--RHPKSDSTEGIKNVEKEVPREDEIN-LDFEMVACVP 120
           ED Y+HP  GE RPCS FLL+I  +  K   ++ + +  ++V  E+    L  ++VA + 
Sbjct: 61  EDPYAHPALGEQRPCSGFLLRISKQDIKKPESQSVLDTSRDVCLEEASPVLCADIVARLS 120

Query: 121 EAYHFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFAL 180
           E++HF+GMADYQHV+  HAD  ++KK  W ++ +P  GK + + +  ED M+L+P  FA 
Sbjct: 121 ESFHFDGMADYQHVIPIHADIAQQKKRKWMDV-DPLTGKSDLMGLADEDVMMLLPQFFAP 180

Query: 181 KDVPESLVFDTACLYAPKSLETVI---------------------------WEKFVPQGS 240
           KD+P+++         PK  +                              WE FV + S
Sbjct: 181 KDIPDNVALKPPATSGPKKKDDAATQNFYEIDVGPVFAIDFSVKEIPKKLKWEDFVSRSS 240

Query: 241 EEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQRFW 300
             W +QVAVS LFEERPIW ++S+V+R+L  GL   H +  R L R AYYFSSGPF RFW
Sbjct: 241 NHWQWQVAVSALFEERPIWTRDSVVQRLLDKGLKCTHHMLNRFLLRAAYYFSSGPFLRFW 300

Query: 301 IKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQTSL 360
           IK+GYDPR D +SR YQR++FRVP  LR YC++NA++    +   ICAF++FP K QT L
Sbjct: 301 IKRGYDPRNDPESRVYQRMEFRVPPELRGYCDANATNNSKPSWNDICAFKLFPFKCQTFL 360

Query: 361 QLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPLLR 420
           QLFEL+DEYIQ EI+KP ++T+CS++SGWFS  +L+ LR R+ +RF+ VFP    E + +
Sbjct: 361 QLFELDDEYIQREIRKPPKQTTCSHKSGWFSEAMLDTLRLRVAVRFVSVFPETGFEDVFK 420

Query: 421 AASENFEKLKR-DIKKGCLKVDL--------GGDHQANAAVINDDKLETNSGEEDEDGLA 480
           +  E FE+ ++  I+K  LK  L        G +       +N++ ++ N  E+ ED   
Sbjct: 421 SIQEEFERSEKVQIQKETLKPSLVKHREATKGSEDMETFKSVNEN-VDANVNEDGEDE-N 480

Query: 481 VESGDEALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDED---DQK 525
           ++  DE  +E +E +M   D+EISL SH YL+ ++ SRT+LQ LF SFPS + +   D  
Sbjct: 481 LDDEDEDEEEEEELDMAAGDNEISLDSHGYLDTENSSRTYLQGLFDSFPSSEPNLYGDFA 540

[Close]

BLAST of CmaCh11G015750 vs. TAIR 10
Match: AT5G24450.1 (Transcription factor IIIC, subunit 5 )

HSP 1 Score: 411.8 bits (1057), Expect = 8.5e-115
Identity = 242/559 (43.29%), Postives = 342/559 (61.18%), Query Frame = 0


Query: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60
           MG +++ TISG LP+ + F VHYPGYPSS  RA+ETLGG Q I   R+  SNKLEL FRP
Sbjct: 1   MGIIENGTISGNLPSKEAFVVHYPGYPSSISRAVETLGGIQGITTARESTSNKLELHFRP 60

Query: 61  EDSYSHPTHGELRPCSCFLLKI--RHPKSDS---TEGIKNVEKEVPREDEINLDFEMVAC 120
           ED  +HP +GE R C+ FLLKI     K DS   ++ + +       E    L  ++VA 
Sbjct: 61  EDPSAHPAYGERRHCNGFLLKISKEDVKKDSLPESQPVISTSDACLPEVRPALCADIVAR 120

Query: 121 VPEAYHFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVF 180
           V E+Y F+GM DYQHV+  HAD  ++KK  W E+ +   GK + +D+  ED M+L+P  F
Sbjct: 121 VSESYCFDGMVDYQHVIPIHADIAQQKKRKWMEV-KSLAGKNDLMDMADEDVMMLLPQFF 180

Query: 181 ALKDVPESLVFDTACLYAPKSLETVI---------------------------WEKFVPQ 240
           + KD P++LV       +PK  +  +                           WE ++  
Sbjct: 181 SPKDRPDNLVLRLPVTSSPKKKDEELTQNLYEIDIGPVFAIDFSVKEIPKILKWEDYIVP 240

Query: 241 GSEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLSRIAYYFSSGPFQR 300
            S +W +QVAVS LFEERP+W ++S+V+R+L  GL   H +  R L R AYYFS GPF R
Sbjct: 241 TSNQWKWQVAVSALFEERPVWTRDSIVQRLLDKGLTCTHHMLNRFLLRAAYYFSGGPFLR 300

Query: 301 FWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEKICAFQVFPHKFQT 360
           FWIK+GYDPRKD +SR +QR++FRVP  L+ YC+SNA+++   + + ICAF+VFP K QT
Sbjct: 301 FWIKRGYDPRKDPESRVFQRMEFRVPPELKGYCDSNATNKSKPSWDDICAFKVFPFKCQT 360

Query: 361 SLQLFELEDEYIQEEIKKPSEETSCSYESGWFSLRILNCLRQRIMMRFLLVFPTADAEPL 420
            LQLFEL+DEYIQ+EI+KP ++T+C+Y++GWFS  +L+ LR R+ +RF+ VFP    E +
Sbjct: 361 FLQLFELDDEYIQQEIRKPPKQTTCNYKTGWFSEALLDNLRLRVAVRFVSVFPEPGFEDV 420

Query: 421 LRAASENFEKL-KRDIKKGCLKVDLGGDHQANAAVINDDKLETNSGEEDEDGLAVESGDE 480
            ++  E FE+  K  I+K  L+     +HQ       D K   N+ +E +D +  +   E
Sbjct: 421 FKSIQEEFERSEKTRIQKDALQPS-QRNHQETT---KDMKKCKNTNKEKDDDVNADEDSE 480

Query: 481 ALDEYDEFNMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFPSMDED-DQKLDDGDGSE 525
            LD  DE+    +DD+IS+ SH Y +M++ SRT+LQ LF  FPS         +D + S+
Sbjct: 481 DLD--DEYEEAANDDDISISSHGYGDMENNSRTYLQGLFNRFPSSASALYGSANDDNDSD 540

The following BLAST results are available for this feature:

BLAST of CmaCh11G015750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54GS8	7.9e-25	24.46	General transcription factor 3C polypeptide 5 OS=Dictyostelium discoideum OX=446...	[more]
Q9Y5Q8	9.7e-23	26.56	General transcription factor 3C polypeptide 5 OS=Homo sapiens OX=9606 GN=GTF3C5 ...	[more]
Q8R2T8	2.2e-22	24.92	General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5...	[more]
O14229	7.7e-12	21.67	Transcription factor tau subunit sfc1 OS=Schizosaccharomyces pombe (strain 972 /...	[more]

BLAST of CmaCh11G015750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKL2	1.6e-294	93.28	general transcription factor 3C polypeptide 5-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1EPX9	2.1e-286	90.93	general transcription factor 3C polypeptide 5-like OS=Cucurbita moschata OX=3662...	[more]
A0A1S4E516	8.0e-230	74.02	general transcription factor 3C polypeptide 5-like isoform X1 OS=Cucumis melo OX...	[more]
A0A0A0KV91	6.3e-227	72.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630700 PE=4 SV=1	[more]
A0A1S3CMW8	7.8e-225	73.13	general transcription factor 3C polypeptide 5-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of CmaCh11G015750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989615.1	3.3e-294	93.28	general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989...	[more]
KAG7022593.1	1.1e-292	95.48	General transcription factor 3C polypeptide 5, partial [Cucurbita argyrosperma s...	[more]
XP_023530657.1	2.3e-287	90.93	general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_022927790.1	4.3e-286	90.93	general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_0229...	[more]
XP_008465056.1	1.7e-229	74.02	PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumi...	[more]

BLAST of CmaCh11G015750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49410.1	4.2e-122	44.06	Transcription factor IIIC, subunit 5	[more]
AT5G24450.1	8.5e-115	43.29	Transcription factor IIIC, subunit 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019136	Transcription factor IIIC subunit 5, HTH domain	PFAM	PF09734	Tau95	coord: 202..292 e-value: 1.6E-24 score: 87.3
IPR042536	TFIIIC, subcomplex tauA subunit Sfc1, triple barrel domain superfamily	GENE3D	3.30.200.160	TFIIIC, subcomplex tauA, subunit Sfc1, barrel domain	coord: 10..132 e-value: 1.7E-30 score: 107.3
IPR041499	Transcription factor IIIC subunit Tfc1/Sfc1, triple barrel domain	PFAM	PF17682	Tau95_N	coord: 20..130 e-value: 3.0E-21 score: 76.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 486..525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..525
IPR040454	Transcription factor IIIC subunit Tfc1/Sfc1	PANTHER	PTHR13230	GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5	coord: 3..521

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G015750.1	CmaCh11G015750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006384	transcription initiation from RNA polymerase III promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000127	transcription factor TFIIIC complex
molecular_function	GO:0003677	DNA binding