CmaCh11G014680 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G014680
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptioncystinosin homolog
LocationCma_Chr11: 9675411 .. 9679212 (-)
RNA-Seq ExpressionCmaCh11G014680
SyntenyCmaCh11G014680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGTAACAAACAGTCGTCTTGTTTAGTGCAATGCATCTTTGCTTGGATGCATTTCTTGGAGAAATGTAGCCATGGACAAGGTTCGTTTCTTGAATTCTATTTGGGTTCAGTTTTAATACTTATAGGTTATCATTATCACAGCGATTTTACTCTTTCAATCCTGAAATGAACCCATCTGAGATCGATGATTTGAATATCTAAAAGTAACACGAAGGAGAAACCCGTAGTTTATACAGATTTGCTGAAAATCGAAGGATTCGCACTCTTATTTTTACTTACATTTCTGCAAATCCGTGTTGATTTTCGAGAAATTTTAGCATGATAGCAATGTGTAATCGAAGATTAATAATCCTAATCTTATGAATGTGCTATTGAATCTGAACAGTTTTCATTGATTGCTGCAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAAGTCAGTGGTTTATTCTCTTTGTGTTTGATCCTGTTTTGGTTTAATTTGGGTTACCATTTCGCATTCTATTGATTGAATTTTGGTGCAGTGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTCGTTTCCTTTCCATGTTCAAGTAACCATTTCTTCATCTCTTAAAATTTTTTTGGAGTTATATTTTGATTGATTTGCTTATAATTCAGCAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGTTAGGCTAAACTACACAGTTAATTCTTATTTATTCGTCTTTTTGTTCTTAGTCTTTTTTATGATTCAACTTAACATCTGAACAAATTCACAATTCACATGTGTTCATCATAGCTTTTGAATTAATTTTTTTTAATGAGTTCTTCGATTTTGGTCCATTTTCTACAATTTCAGTAACAACCAATGCACTAATATATTAAAAAGTAGTAGCACAAGGCTAAAAGTTTTATGAGATGGCTACAAAAACTTACCGCTAGTAGATATTGTCCGCTTGGCCCGTTACGTATCGTCATCAACCTTATGATTTTAAAATGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCCCCTCTTCCATCGATGTACGATCTCACAATCCACTCCTTGGGAGCCCAGTGTCCTCGCTAGGCAACCGCCTGGTATCTGGCTCTGATATCATTTGTAACAACCCAAACCCACTGCTAGCAAATATTGTCTATTTTGGTCCATTACATATCACTGTCAGCGTCACGGTTTTAAAATGCTTCTACTAGGAAAAGGTTCCACATCCTTATAAAAAATATTTCGTTCCACTCTCCAACCAATGTGAGATCTCACAATCCACCCCCTTTGGGAGCACTGCGTTCTTGCTGGCACACTGCTCGGTAACTGGCTCCGATACCATTTGTAACAGACCAAACCTAATAATAGCAAATATTGTCCGCTTCAACCGATGTGGGATCTCACAAGAAAAAAATTTCTCATATAGTTTGAAACCTTCGAGAATTAGTCCGACCCCAAGTGTGGTAATGTTTCCTAAAGTTATCATGGAATTGTTTAGCTACTCCAAATGTTTGCAATATGACCATGTGGCTGTTAAGAAGTGTAAATCCATTTGAGAGTAAAATAAATTTGTGCTTACGTTTGCTTCTGATATAAACTTGCAAGCAAAGAACAAGGAAGCTTGCATTTCACGAAGTCCCATTGTTTACATTCAGGCATTTTTAAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCAAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAATCAATTTACCAAGGTCATCTAATGTTTTCTTAACCAAACAATTGCCTAATACTTCTGTTGTGATTTATATCTGCGGTTAGCTTGGTATTGATAGCCATATTTTATTTGAACCGTATAATTTAAGGGTCAATATGGAAAACATATGACTTTAATTTACGAGAAAAATGCACTCGTGGTCTCTGAGGTTTGAGTTTGGAAGCATTTAGGTCTCTTTCAAACCCAACAATTTAGCCCCTAAATTTTAGATTTAGTTTCATTTTGGTCCCTCGATCCAAATTTCCGTTAATTACTAATGACATGGTCACATGACATTTGTTTTCCCTTCTCCCTCCTCCTCCCATTCTTCTTCTTCCTCCATCCATGGCTGCCACTAGCTACCATGGTCGCCTCATCATTTATAATGACATAAATGAAACTAAATCCAAAACTCGGGGCTAAATTGTTAAGTTTGAAAACTCAGGGACCTAAGTGTTACCGAGCTCAAACCTGAAGGACCAAAAGTTTTTCCATAATTTGTAATGACATTGTGATGTCCCACATTGGTTGGGGAGAAGAACAAACCACCATTTATAAGGCGGAAACCTTCCTCTAGCGGACGCGTTTTAAAGCTTTGAGGGAAAACCCAAAAGGGAAAGCCCAAAAAGAACATTATCTGCCAGAGGTGGATCTGGACCGTTACAGATGGTATCAGAGCCGGACATCGGAAAATGTGTCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACGAGGAGGTGTGCCAGTAAGGATGTTGGGCCCCAAAGGGGGGTGGATTTAGGGGCGGTCCCACATCAATTGGAGGAAGGAAAGAGTGCCACCGAGGATGTTGGGCCCCGAAGGGGGGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCTTTGAGGGAAGACCTGAAAGGGAAAGTCCGAAGAAAGCCCAAAGAGGACAATATCTACTAGCAGTGGATCTAGGCCGTTACAGACATATGTGAAAAATACATCAAACGTATAATTTTGATATGGTTGTTCATCCTAGGGTTAGGACGAATTTACAAGAATATATTTTGAAAGTACTCTCATTATATGCAATATTCATATTTATCTATGTATTTTTTAAAATTGTATCGTGGATGCTTTTATCTAAACATCAAGTTTGATGATTGCTCTAGTTTTTGTTGTTTTTTTATGCTGAAACGGTTTTTCTTTATCCATGGGCAATGAATTTTGATGTAATGGAGGTATCTGTCTTTATAGAAGCTTTAATTTGCGTGTTTATCCTAATTGTCGGTTTAGTTTATGCATTGGGAAAAGGAGATTGGAATGGTATTAATTTTTGAATATTTAGACAATTAAAAAAATATTTGAGTTTCTGAACAACCCATACTCAGTATTATCATCCTAAATTCCATCTAAATTTTGACTTCTGATTCTTTCCAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTCAATACGATATTTCTCTCTCTCTCTCTCTAACAGTACTTGTCGAAGTCAATTACCTTTTAGTCCCTGATGATTTGATTCGAGAGCCAACTATGGCTTTCAAAAGTGTTAAGAGTAATTTGAGTTAGCAATATTTGCTCACTACAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTACCACAACCAATTGA

mRNA sequence

GATGTAACAAACAGTCGTCTTGTTTAGTGCAATGCATCTTTGCTTGGATGCATTTCTTGGAGAAATGTAGCCATGGACAAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAATGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTCGTTTCCTTTCCATGTTCAACAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGCATTTTTAAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCAAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAATCAATTTACCAAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTACCACAACCAATTGA

Coding sequence (CDS)

ATGGACAAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAATGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTCGTTTCCTTTCCATGTTCAACAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGCATTTTTAAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCAAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAATCAATTTACCAAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTACCACAACCAATTGA

Protein sequence

MDKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIALPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRLHWRSGHFDSNERAINLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEALLENSDHLQGITTTN
Homology
BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: P57758 (Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-19
Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 0

Query: 3   KMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIAL 62
           +MIPVA +DV F  H++++  +   QIF++E G QKVS  A+ I   VW FAA CFFIAL
Sbjct: 84  EMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIAL 143

Query: 63  PTHSWLWLVSFPCSTRLIGNVLQF---NSSSYDSHQILPSGIFKLYPKEHDGIQH----- 122
           PTHSWLWL+S   S ++    +++      ++     +   I  +      G+ +     
Sbjct: 144 PTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMV 203

Query: 123 SYCSSRLHWRSGHFDSNERAINLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDP 182
                +  W++ + +  +  ++L       +SI FD++F +QH+VLY  K    S +   
Sbjct: 204 IQSIDQNSWKNFYGNMGKTLLSL-------ISIFFDILFMFQHYVLYPEKKVSKSPETGE 263

Query: 183 ESTEALLENS 185
           ES E L+++S
Sbjct: 264 ESNEPLIDSS 266

BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: O60931 (Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 0

Query: 6   PVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFI-ALPT 65
           PV  +DVFF  H+++L  I+ VQ  L+E G Q+VS  A+      W+FA     + A+  
Sbjct: 200 PVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGV 259

Query: 66  HSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRLHWR 125
            +WL  +      +L   ++++   +Y +     +  + +     D    S+   ++  +
Sbjct: 260 TTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQ 319

Query: 126 SGHFDSNERAINLPSYIALQV-SIVFDLIFFYQHFVLYR 163
           S + D        P+   L V SIVFD++FF QHF LYR
Sbjct: 320 SYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYR 358

BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: A7MB63 (Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.1e-07
Identity = 45/161 (27.95%), Postives = 77/161 (47.83%), Query Frame = 0

Query: 6   PVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFA-AACFFIALPT 65
           PV  +DVFF  H++ L  +V VQ  L+E G Q+VS  A++     W+F   A    A+  
Sbjct: 200 PVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGA 259

Query: 66  HSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRLHWR 125
            +WL  +      +L   ++++   +Y +     +  + +     D    S+   ++  +
Sbjct: 260 TTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVLLDFTGGSFSLLQMFLQ 319

Query: 126 SGHFDSNERAINLPSYIALQV-SIVFDLIFFYQHFVLYRVK 165
           S + D        P+   L + SI+FD++FF QHF LYR K
Sbjct: 320 SYNNDQWTLIFGDPTKFGLGIFSIIFDVVFFIQHFCLYRKK 360

BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: P57757 (Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 43/161 (26.71%), Postives = 76/161 (47.20%), Query Frame = 0

Query: 6   PVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFI-ALPT 65
           PV  +D FF  H++ L  IV +Q  L+E G+Q+VS  ++      W+F      + A+  
Sbjct: 200 PVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGI 259

Query: 66  HSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRLHWR 125
            +WL  +      +LI  ++++   +Y +     +  + +     D    S+   ++  +
Sbjct: 260 TTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVLLDFTGGSFSLLQMFLQ 319

Query: 126 SGHFDSNERAINLPSYIALQV-SIVFDLIFFYQHFVLYRVK 165
           S + D        P+   L V +I FD++FF QHF LYR K
Sbjct: 320 SYNNDQWTLIFGDPTKFGLGVFTIFFDVVFFIQHFYLYRKK 360

BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: Q54WT7 (Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 43/178 (24.16%), Postives = 76/178 (42.70%), Query Frame = 0

Query: 5   IPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIALP- 64
           IPV  SD+ F  H  +L  I  +Q F+++ G+QK S   + I   +WV       +    
Sbjct: 79  IPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSN 138

Query: 65  THSWLWLVSFPCSTRLIGNVLQF-----------NSSSYDSHQIL---PSGIFKLYPKEH 124
             +WLW++++    +L    +++           ++S +  H +L     G+  L     
Sbjct: 139 VFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNVLLDFSGGVLSLLQMFL 198

Query: 125 DGIQHSYCSSRLHWRSGHFDSNERAINLPSYIALQVSIVFDLIFFYQHFVLYRVKASK 168
           D       +   +W     D  +  ++L        SI FD++F  QH++LYR   SK
Sbjct: 199 D------VADSGNWNIFTGDPVKLGLSL-------FSIAFDILFIIQHYILYRNPKSK 243

BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A6J1EJ63 (cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.1e-54
Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA
Sbjct: 115 DQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 174

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   S +++  V++++  ++ +     +  F ++    D I      +++
Sbjct: 175 LPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKSTMGFSIHTVVLDFIGGVATLTQM 234

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 181
             +S    S      N+   +   VSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL
Sbjct: 235 GVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 294

Query: 182 LENSDHLQGITTTN 195
           LENSDHLQGI TTN
Sbjct: 295 LENSDHLQGIATTN 308

BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A1S4DYQ8 (cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38
Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = 0

Query: 4   MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIALP 63
           MIPVALSDVFFP HSI+LIF+VSVQI  F+ G QKVS +A+AI  AVW FA ACFF+ALP
Sbjct: 31  MIPVALSDVFFPFHSIILIFVVSVQIIFFDRGSQKVSKAAIAILVAVWFFAGACFFMALP 90

Query: 64  THSWLWLVSFPCSTRLIGNVLQFNSS---SYDSHQILPSGIFKLYPKEHDGIQHSYCSSR 123
           THSWLWLVS   S ++   V++++     ++     +   I  +      G+      S 
Sbjct: 91  THSWLWLVSIFNSIQVFMTVIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV 150

Query: 124 LHWRSGHFDSNERAINLP--SYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPEST- 183
                G + +    I  P  +   LQVSI FDLIFFYQHFVLY +KAS+VS QRDPEST 
Sbjct: 151 QSVDQGSWVNFLGNIGKPLLALTVLQVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD 210

Query: 184 -EALLENSDHLQGITTTN 195
            E L+++SDHLQGI TT+
Sbjct: 211 SEPLIKDSDHLQGIATTS 228

BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A1S4DY01 (cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38
Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = 0

Query: 4   MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIALP 63
           MIPVALSDVFFP HSI+LIF+VSVQI  F+ G QKVS +A+AI  AVW FA ACFF+ALP
Sbjct: 1   MIPVALSDVFFPFHSIILIFVVSVQIIFFDRGSQKVSKAAIAILVAVWFFAGACFFMALP 60

Query: 64  THSWLWLVSFPCSTRLIGNVLQFNSS---SYDSHQILPSGIFKLYPKEHDGIQHSYCSSR 123
           THSWLWLVS   S ++   V++++     ++     +   I  +      G+      S 
Sbjct: 61  THSWLWLVSIFNSIQVFMTVIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQMSV 120

Query: 124 LHWRSGHFDSNERAINLP--SYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPEST- 183
                G + +    I  P  +   LQVSI FDLIFFYQHFVLY +KAS+VS QRDPEST 
Sbjct: 121 QSVDQGSWVNFLGNIGKPLLALTVLQVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTD 180

Query: 184 -EALLENSDHLQGITTTN 195
            E L+++SDHLQGI TT+
Sbjct: 181 SEPLIKDSDHLQGIATTS 198

BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A0A0LB92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.8e-36
Identity = 97/196 (49.49%), Postives = 129/196 (65.82%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDVFFP HSI+LI +VSVQI  F+ G QKVS +++AI  AVW FA ACFF+A
Sbjct: 83  DQMIPVALSDVFFPFHSIILILVVSVQIVFFDRGSQKVSKASIAILVAVWFFAGACFFMA 142

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   S ++    ++++  ++ +     +  F +     D        +++
Sbjct: 143 LPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFSGGVATLAQM 202

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPEST--E 181
             +S    S    + N+   +   VSI FDLIFFYQHFVLY +KAS+VS QRDPEST  E
Sbjct: 203 SVQSVDQGSWVNFLGNIGKPLLALVSIAFDLIFFYQHFVLYHIKASRVSFQRDPESTDSE 262

Query: 182 ALLENSDHLQGITTTN 195
            L+++SDHLQGI TT+
Sbjct: 263 PLIKDSDHLQGIGTTS 278

BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A6J1DN06 (cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 7.2e-35
Identity = 91/191 (47.64%), Postives = 126/191 (65.97%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDV FP HS+LLIF+ SVQI   E G+QK+S  A+AIFA VW FAAACFFIA
Sbjct: 83  DQMIPVALSDVIFPIHSLLLIFVFSVQIAFSERGNQKLSKIAIAIFAGVWFFAAACFFIA 142

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   + ++   +++++  ++ +     +  F +     D        +++
Sbjct: 143 LPTHSWLWLVSIFNTIQVFMTIIKYSPQAFMNFTRKSTVGFSIGNVVLDFTGGVASLAQM 202

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 181
             +S    S      N+   +   +SI+FDLIFFYQHFVLY  KAS++S Q DPESTE L
Sbjct: 203 SVQSIDQGSWVNFFGNIGKPLLALISIMFDLIFFYQHFVLYHTKASRISFQLDPESTEPL 262

Query: 182 LENSDHLQGIT 192
           +++SDHL+G++
Sbjct: 263 VKDSDHLKGLS 273

BLAST of CmaCh11G014680 vs. NCBI nr
Match: KAG6588928.1 (Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.5 bits (563), Expect = 6.4e-54
Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA
Sbjct: 83  DQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 142

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   S +++  V++++  ++ +     +  F ++    D I      +++
Sbjct: 143 LPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKSTMGFSIHTVVLDFIGGVATLTQM 202

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 181
             +S    S      N+   +   VSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL
Sbjct: 203 SVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 262

Query: 182 LENSDHLQGITTTN 195
           LENSDHLQGI TTN
Sbjct: 263 LENSDHLQGIATTN 276

BLAST of CmaCh11G014680 vs. NCBI nr
Match: KAG7022696.1 (Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.5 bits (563), Expect = 6.4e-54
Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA
Sbjct: 83  DQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 142

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   S +++  V++++  ++ +     +  F ++    D I      +++
Sbjct: 143 LPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKSTMGFSIHTVVLDFIGGVATLTQM 202

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 181
             +S    S      N+   +   VSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL
Sbjct: 203 SVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 262

Query: 182 LENSDHLQGITTTN 195
           LENSDHLQGI TTN
Sbjct: 263 LENSDHLQGIATTN 276

BLAST of CmaCh11G014680 vs. NCBI nr
Match: XP_022928176.1 (cystinosin homolog [Cucurbita moschata] >XP_022928177.1 cystinosin homolog [Cucurbita moschata])

HSP 1 Score: 221.1 bits (562), Expect = 8.4e-54
Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA
Sbjct: 115 DQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 174

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   S +++  V++++  ++ +     +  F ++    D I      +++
Sbjct: 175 LPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKSTMGFSIHTVVLDFIGGVATLTQM 234

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 181
             +S    S      N+   +   VSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL
Sbjct: 235 GVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 294

Query: 182 LENSDHLQGITTTN 195
           LENSDHLQGI TTN
Sbjct: 295 LENSDHLQGIATTN 308

BLAST of CmaCh11G014680 vs. NCBI nr
Match: XP_023530874.1 (cystinosin homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-53
Identity = 126/194 (64.95%), Postives = 147/194 (75.77%), Query Frame = 0

Query: 2   DKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 61
           D+MIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA
Sbjct: 83  DQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIA 142

Query: 62  LPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRL 121
           LPTHSWLWLVS   S +++  V++++  ++ +     +  F ++    D I      +++
Sbjct: 143 LPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKSTMGFTIHTVVLDFIGGVATLTQM 202

Query: 122 HWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEAL 181
             +S    S      N+   +   VSIVFDLIFFYQHFVLYRVKA+KVSSQRDPESTEAL
Sbjct: 203 SVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHFVLYRVKATKVSSQRDPESTEAL 262

Query: 182 LENSDHLQGITTTN 195
           LENSDHLQGI TTN
Sbjct: 263 LENSDHLQGIATTN 276

BLAST of CmaCh11G014680 vs. NCBI nr
Match: XP_038884327.1 (cystinosin homolog isoform X11 [Benincasa hispida])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-38
Identity = 101/195 (51.79%), Postives = 132/195 (67.69%), Query Frame = 0

Query: 1   MDKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFI 60
           MD+MIPVALSDVFFP HSILLI +VSVQI  F+ G+QKVS +++AIF AVW FAAACFF+
Sbjct: 1   MDEMIPVALSDVFFPFHSILLISVVSVQIVFFDRGNQKVSKTSIAIFVAVWFFAAACFFM 60

Query: 61  ALPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSR 120
           ALPTHSWLWLVS   S ++    ++++  ++ +     +  F +     D        ++
Sbjct: 61  ALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRKSTVGFSIGNIVLDFTGGVGTLAQ 120

Query: 121 LHWRSGHFDSNERAI-NLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEA 180
           +  +S    S      N+   +   VSI FDLIFFYQHFVLY +KAS+VS QRDPESTE 
Sbjct: 121 MSVQSIDQGSWVNFFGNIGKPLLALVSIGFDLIFFYQHFVLYHIKASRVSFQRDPESTEP 180

Query: 181 LLENSDHLQGITTTN 195
           L+++SDHLQGI TT+
Sbjct: 181 LIKDSDHLQGIATTS 195

BLAST of CmaCh11G014680 vs. TAIR 10
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20
Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 0

Query: 3   KMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIAL 62
           +MIPVA +DV F  H++++  +   QIF++E G QKVS  A+ I   VW FAA CFFIAL
Sbjct: 84  EMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIAL 143

Query: 63  PTHSWLWLVSFPCSTRLIGNVLQF---NSSSYDSHQILPSGIFKLYPKEHDGIQH----- 122
           PTHSWLWL+S   S ++    +++      ++     +   I  +      G+ +     
Sbjct: 144 PTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMV 203

Query: 123 SYCSSRLHWRSGHFDSNERAINLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDP 182
                +  W++ + +  +  ++L       +SI FD++F +QH+VLY  K    S +   
Sbjct: 204 IQSIDQNSWKNFYGNMGKTLLSL-------ISIFFDILFMFQHYVLYPEKKVSKSPETGE 263

Query: 183 ESTEALLENS 185
           ES E L+++S
Sbjct: 264 ESNEPLIDSS 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P577582.4e-1932.63Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1[more]
O609312.8e-0728.93Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2[more]
A7MB636.1e-0727.95Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1[more]
P577571.2e-0526.71Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1[more]
Q54WT71.5e-0524.16Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1EJ634.1e-5465.46cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1[more]
A0A1S4DYQ84.1e-3851.52cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1[more]
A0A1S4DY014.1e-3851.52cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1[more]
A0A0A0LB923.8e-3649.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1[more]
A0A6J1DN067.2e-3547.64cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6588928.16.4e-5465.46Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7022696.16.4e-5465.46Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022928176.18.4e-5465.46cystinosin homolog [Cucurbita moschata] >XP_022928177.1 cystinosin homolog [Cucu... [more]
XP_023530874.11.9e-5364.95cystinosin homolog [Cucurbita pepo subsp. pepo][more]
XP_038884327.11.3e-3851.79cystinosin homolog isoform X11 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT5G40670.11.7e-2032.63PQ-loop repeat family protein / transmembrane family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13131:SF11LYSOSOMAL CYSTINE TRANSPORTER FAMILY PROTEINcoord: 3..83
NoneNo IPR availablePANTHERPTHR13131:SF11LYSOSOMAL CYSTINE TRANSPORTER FAMILY PROTEINcoord: 144..176
IPR005282Lysosomal cystine transporterPANTHERPTHR13131CYSTINOSINcoord: 3..83
IPR005282Lysosomal cystine transporterPANTHERPTHR13131CYSTINOSINcoord: 144..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G014680.1CmaCh11G014680.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
cellular_component GO:0005773 vacuole