CmaCh11G014680 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATGTAACAAACAGTCGTCTTGTTTAGTGCAATGCATCTTTGCTTGGATGCATTTCTTGGAGAAATGTAGCCATGGACAAGGTTCGTTTCTTGAATTCTATTTGGGTTCAGTTTTAATACTTATAGGTTATCATTATCACAGCGATTTTACTCTTTCAATCCTGAAATGAACCCATCTGAGATCGATGATTTGAATATCTAAAAGTAACACGAAGGAGAAACCCGTAGTTTATACAGATTTGCTGAAAATCGAAGGATTCGCACTCTTATTTTTACTTACATTTCTGCAAATCCGTGTTGATTTTCGAGAAATTTTAGCATGATAGCAATGTGTAATCGAAGATTAATAATCCTAATCTTATGAATGTGCTATTGAATCTGAACAGTTTTCATTGATTGCTGCAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAAGTCAGTGGTTTATTCTCTTTGTGTTTGATCCTGTTTTGGTTTAATTTGGGTTACCATTTCGCATTCTATTGATTGAATTTTGGTGCAGTGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTCGTTTCCTTTCCATGTTCAAGTAACCATTTCTTCATCTCTTAAAATTTTTTTGGAGTTATATTTTGATTGATTTGCTTATAATTCAGCAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGTTAGGCTAAACTACACAGTTAATTCTTATTTATTCGTCTTTTTGTTCTTAGTCTTTTTTATGATTCAACTTAACATCTGAACAAATTCACAATTCACATGTGTTCATCATAGCTTTTGAATTAATTTTTTTTAATGAGTTCTTCGATTTTGGTCCATTTTCTACAATTTCAGTAACAACCAATGCACTAATATATTAAAAAGTAGTAGCACAAGGCTAAAAGTTTTATGAGATGGCTACAAAAACTTACCGCTAGTAGATATTGTCCGCTTGGCCCGTTACGTATCGTCATCAACCTTATGATTTTAAAATGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCCCCTCTTCCATCGATGTACGATCTCACAATCCACTCCTTGGGAGCCCAGTGTCCTCGCTAGGCAACCGCCTGGTATCTGGCTCTGATATCATTTGTAACAACCCAAACCCACTGCTAGCAAATATTGTCTATTTTGGTCCATTACATATCACTGTCAGCGTCACGGTTTTAAAATGCTTCTACTAGGAAAAGGTTCCACATCCTTATAAAAAATATTTCGTTCCACTCTCCAACCAATGTGAGATCTCACAATCCACCCCCTTTGGGAGCACTGCGTTCTTGCTGGCACACTGCTCGGTAACTGGCTCCGATACCATTTGTAACAGACCAAACCTAATAATAGCAAATATTGTCCGCTTCAACCGATGTGGGATCTCACAAGAAAAAAATTTCTCATATAGTTTGAAACCTTCGAGAATTAGTCCGACCCCAAGTGTGGTAATGTTTCCTAAAGTTATCATGGAATTGTTTAGCTACTCCAAATGTTTGCAATATGACCATGTGGCTGTTAAGAAGTGTAAATCCATTTGAGAGTAAAATAAATTTGTGCTTACGTTTGCTTCTGATATAAACTTGCAAGCAAAGAACAAGGAAGCTTGCATTTCACGAAGTCCCATTGTTTACATTCAGGCATTTTTAAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCAAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAATCAATTTACCAAGGTCATCTAATGTTTTCTTAACCAAACAATTGCCTAATACTTCTGTTGTGATTTATATCTGCGGTTAGCTTGGTATTGATAGCCATATTTTATTTGAACCGTATAATTTAAGGGTCAATATGGAAAACATATGACTTTAATTTACGAGAAAAATGCACTCGTGGTCTCTGAGGTTTGAGTTTGGAAGCATTTAGGTCTCTTTCAAACCCAACAATTTAGCCCCTAAATTTTAGATTTAGTTTCATTTTGGTCCCTCGATCCAAATTTCCGTTAATTACTAATGACATGGTCACATGACATTTGTTTTCCCTTCTCCCTCCTCCTCCCATTCTTCTTCTTCCTCCATCCATGGCTGCCACTAGCTACCATGGTCGCCTCATCATTTATAATGACATAAATGAAACTAAATCCAAAACTCGGGGCTAAATTGTTAAGTTTGAAAACTCAGGGACCTAAGTGTTACCGAGCTCAAACCTGAAGGACCAAAAGTTTTTCCATAATTTGTAATGACATTGTGATGTCCCACATTGGTTGGGGAGAAGAACAAACCACCATTTATAAGGCGGAAACCTTCCTCTAGCGGACGCGTTTTAAAGCTTTGAGGGAAAACCCAAAAGGGAAAGCCCAAAAAGAACATTATCTGCCAGAGGTGGATCTGGACCGTTACAGATGGTATCAGAGCCGGACATCGGAAAATGTGTCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACGAGGAGGTGTGCCAGTAAGGATGTTGGGCCCCAAAGGGGGGTGGATTTAGGGGCGGTCCCACATCAATTGGAGGAAGGAAAGAGTGCCACCGAGGATGTTGGGCCCCGAAGGGGGGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCTTTGAGGGAAGACCTGAAAGGGAAAGTCCGAAGAAAGCCCAAAGAGGACAATATCTACTAGCAGTGGATCTAGGCCGTTACAGACATATGTGAAAAATACATCAAACGTATAATTTTGATATGGTTGTTCATCCTAGGGTTAGGACGAATTTACAAGAATATATTTTGAAAGTACTCTCATTATATGCAATATTCATATTTATCTATGTATTTTTTAAAATTGTATCGTGGATGCTTTTATCTAAACATCAAGTTTGATGATTGCTCTAGTTTTTGTTGTTTTTTTATGCTGAAACGGTTTTTCTTTATCCATGGGCAATGAATTTTGATGTAATGGAGGTATCTGTCTTTATAGAAGCTTTAATTTGCGTGTTTATCCTAATTGTCGGTTTAGTTTATGCATTGGGAAAAGGAGATTGGAATGGTATTAATTTTTGAATATTTAGACAATTAAAAAAATATTTGAGTTTCTGAACAACCCATACTCAGTATTATCATCCTAAATTCCATCTAAATTTTGACTTCTGATTCTTTCCAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTCAATACGATATTTCTCTCTCTCTCTCTCTAACAGTACTTGTCGAAGTCAATTACCTTTTAGTCCCTGATGATTTGATTCGAGAGCCAACTATGGCTTTCAAAAGTGTTAAGAGTAATTTGAGTTAGCAATATTTGCTCACTACAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTACCACAACCAATTGA GATGTAACAAACAGTCGTCTTGTTTAGTGCAATGCATCTTTGCTTGGATGCATTTCTTGGAGAAATGTAGCCATGGACAAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAATGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTCGTTTCCTTTCCATGTTCAACAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGCATTTTTAAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCAAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAATCAATTTACCAAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTACCACAACCAATTGA ATGGACAAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAATGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTCGTTTCCTTTCCATGTTCAACAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGCATTTTTAAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCAAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAATCAATTTACCAAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTACCACAACCAATTGA MDKMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIALPTHSWLWLVSFPCSTRLIGNVLQFNSSSYDSHQILPSGIFKLYPKEHDGIQHSYCSSRLHWRSGHFDSNERAINLPSYIALQVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEALLENSDHLQGITTTN Homology
BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: P57758 (Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.4e-19 Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: O60931 (Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07 Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: A7MB63 (Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.1e-07 Identity = 45/161 (27.95%), Postives = 77/161 (47.83%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: P57757 (Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05 Identity = 43/161 (26.71%), Postives = 76/161 (47.20%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy Swiss-Prot
Match: Q54WT7 (Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05 Identity = 43/178 (24.16%), Postives = 76/178 (42.70%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A6J1EJ63 (cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 4.1e-54 Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A1S4DYQ8 (cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38 Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A1S4DY01 (cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38 Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A0A0LB92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 3.8e-36 Identity = 97/196 (49.49%), Postives = 129/196 (65.82%), Query Frame = 0
BLAST of CmaCh11G014680 vs. ExPASy TrEMBL
Match: A0A6J1DN06 (cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 7.2e-35 Identity = 91/191 (47.64%), Postives = 126/191 (65.97%), Query Frame = 0
BLAST of CmaCh11G014680 vs. NCBI nr
Match: KAG6588928.1 (Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221.5 bits (563), Expect = 6.4e-54 Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0
BLAST of CmaCh11G014680 vs. NCBI nr
Match: KAG7022696.1 (Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.5 bits (563), Expect = 6.4e-54 Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0
BLAST of CmaCh11G014680 vs. NCBI nr
Match: XP_022928176.1 (cystinosin homolog [Cucurbita moschata] >XP_022928177.1 cystinosin homolog [Cucurbita moschata]) HSP 1 Score: 221.1 bits (562), Expect = 8.4e-54 Identity = 127/194 (65.46%), Postives = 147/194 (75.77%), Query Frame = 0
BLAST of CmaCh11G014680 vs. NCBI nr
Match: XP_023530874.1 (cystinosin homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.9 bits (559), Expect = 1.9e-53 Identity = 126/194 (64.95%), Postives = 147/194 (75.77%), Query Frame = 0
BLAST of CmaCh11G014680 vs. NCBI nr
Match: XP_038884327.1 (cystinosin homolog isoform X11 [Benincasa hispida]) HSP 1 Score: 170.6 bits (431), Expect = 1.3e-38 Identity = 101/195 (51.79%), Postives = 132/195 (67.69%), Query Frame = 0
BLAST of CmaCh11G014680 vs. TAIR 10
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20 Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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