CmaCh11G014540 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G014540
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionheterogeneous nuclear ribonucleoprotein 1-like
LocationCma_Chr11: 9590953 .. 9593648 (+)
RNA-Seq ExpressionCmaCh11G014540
SyntenyCmaCh11G014540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGTGGCGCATTGCGAATTCTAGGGTTTAAGGGCGCCATTTTTCCGTACTCGGCGCTGCGAAACCAGCGAGCATCAACACATGTCTTCTAGGGCTTAGTCATTTTCCTTGTTCACTTCTCTTAATCCTCCCTCTCTTCAAGCTCCTCTGTTCCATTAATGTCGGAAAACTCCATGGATTTCAAGGTAAATGATGGTGTTACTAATGGCGAACACGACGACCCCAAGACCTCGAACCATGAAGACGATGGGAGTAGACATGACCGTCCCTCTCATGGCGACGGGGCCAGTGCTGGGTAAGTTATCCTTGTCGGGGTTATTTTTTTGTTTTTAGAGTATTTTGTGGTGCGGGAATGGGGTTCGTGATGAAATCGCGGAGATAGGGTTGTGACGTTTGGTTTTATGTTTTTTGATCCCTGTTTTTTGGTTATTTGATTGCTGCTGCAGGAAAATCTTCGTGGGAGGTTTACCGAGGGAAACAACTTCCGGTTAGTTTTTTCTTACGGTTGTGCGTTTCCTACGAATTGTTGTTTTGTTGTTATTGTAATAGTGGAGGTTTCAATTGATTATTTTGCAGCACAATTTGTTAACCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCCGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATTATTAATGGGAAACATGTAGGCCTGCATTTAGTGTTGATTTTGAGTTAGCTGTTAGGTTTCAATGATTTCAAGCTCAAACTTTGACTTAACTTTAGGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGGTAACTTATTGTTTACATGAATTAATGTTTAGATGGTACTATGAGGTATAGCGTGCTCACTTTTTTAAGTGTCAAGCAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTCAGCAGAGTTCTTTCCTAGCTGAACTAATCTCACATTCTCACTTTCTGTCTTCTATAGAAAATAATTTTGATGGGCTAGTTGTTTTTGAGGAATTATCATTTTTTCAATTCTGTTTGAGCAACGAATGCTCTTGTGGTTGCATGGCCTTCGTATTTATTTTGTATTTATTGGATTTTGGAATCTGAACCTTTTTCAAACAAATATGATTCTAAAGAGATATTTGATTTGAAAAGTCCAAAAGTCCTGTCAAAGTAGTTAGTATTTCTTATTAGTTCCACTTTGAACCTGTCATTCACTCAAGTTATAAATTTCTTAATCTATCTATATGTACATGAATACAATTTATTGAACTAAGGCTATGTTACCCCTAGGCACTAAATTATTCAATTGAAATGTCTATATGAAGCCTCAAATTTATTTCTTGCGAGAGTTGTTCAGTGTTCATTTGGAGTGAAGGTTAAAAAATTTTAGATCTTGAAATCCATTTTGCAAAATGATTTTGGAAAACATTGGTAAGCAAGGTAGATGTAAACTAGTAGAAAATGGTATATATACCACATATATCCATTTTCTACTAGTTTACATTTATATATATATATATATATATATATATATATTGAAGCAGTGCTTTGTTTGTTTGAGTACTTTTTCCAGTTTTTTGACTCTAATACTAAAACATTTTAAACCAAGAAAATAAAAGTGGATGGAATCAAATTTTCAACATTTTCATAACCAAAGCTCATTCGGTTGCTACCCGTTGTCTCTTACAGAAAGCCATTTTTTTAATCACAAGCTTATCAAATTAAGATACATGGTGAAAAGAAAAAGTTAATTGCAATGAGGTTTTATATCTATTCCTGTATGATTTTTTCATTGTATTGGTCATATGTACAAGTACAACATAAGAATAGAAATTCTTTACTAAATATATTCATCAGTTGAAGTCATTTTATCAGTTAAGATTCATGATTCTTTGTTTTAAAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGCCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGAGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGATCTGGCTTTAGCAGAGGTTATGATTTGAGAGGTGGTTATGGTGGACCTGACGAGAGCTATAGCGCGTATAACACCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCTGGTGGTAGAGGCTCAATCTATGGAAGTAGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAAGTGGTCGTTATCATCCTTATGGACGGTAG

mRNA sequence

GTTGTGGCGCATTGCGAATTCTAGGGTTTAAGGGCGCCATTTTTCCGTACTCGGCGCTGCGAAACCAGCGAGCATCAACACATGTCTTCTAGGGCTTAGTCATTTTCCTTGTTCACTTCTCTTAATCCTCCCTCTCTTCAAGCTCCTCTGTTCCATTAATGTCGGAAAACTCCATGGATTTCAAGGTAAATGATGGTGTTACTAATGGCGAACACGACGACCCCAAGACCTCGAACCATGAAGACGATGGGAGTAGACATGACCGTCCCTCTCATGGCGACGGGGCCAGTGCTGGGAAAATCTTCGTGGGAGGTTTACCGAGGGAAACAACTTCCGCACAATTTGTTAACCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCCGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATTATTAATGGGAAACATGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGCCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGAGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGATCTGGCTTTAGCAGAGGTTATGATTTGAGAGGTGGTTATGGTGGACCTGACGAGAGCTATAGCGCGTATAACACCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCTGGTGGTAGAGGCTCAATCTATGGAAGTAGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAAGTGGTCGTTATCATCCTTATGGACGGTAG

Coding sequence (CDS)

ATGTCGGAAAACTCCATGGATTTCAAGGTAAATGATGGTGTTACTAATGGCGAACACGACGACCCCAAGACCTCGAACCATGAAGACGATGGGAGTAGACATGACCGTCCCTCTCATGGCGACGGGGCCAGTGCTGGGAAAATCTTCGTGGGAGGTTTACCGAGGGAAACAACTTCCGCACAATTTGTTAACCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCCGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATTATTAATGGGAAACATGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGCCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGAGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGATCTGGCTTTAGCAGAGGTTATGATTTGAGAGGTGGTTATGGTGGACCTGACGAGAGCTATAGCGCGTATAACACCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCTGGTGGTAGAGGCTCAATCTATGGAAGTAGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAAGTGGTCGTTATCATCCTTATGGACGGTAG

Protein sequence

MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGYDGAGSTPSGRYHPYGR
Homology
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BLAST of CmaCh11G014540 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.7e-40
Identity = 149/398 (37.44%), Postives = 208/398 (52.26%), Query Frame = 0 

Query: 46  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE 105
           GK+FVGG+  ET   +   HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 106 DSHIINGKHVEIKRTIPK--------------GSSSSRDF--KTKKIFVGGIPTSVDEDE 165
           + H I+ + V++KR + +                SS  D   KTKKIFVGG+P ++ ++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 166 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 225
           FR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    + +G QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 226 AEPKKANP----------PPAPSKRYHDSRPSYSG-----------GYGDAYGEFGGAGY 285
           A PK ANP               + Y  +  SY G             G+    +G +GY
Sbjct: 186 ALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 245

Query: 286 GGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYRED----P 345
           G G+     G  YGA GG  G  GGYG    +GYG        YG+S+  A R       
Sbjct: 246 GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPA 305

Query: 346 SMGY-SARYGSGFSR-GYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIG------ 383
           S GY +  YGSG +  GY + G    P +S S Y+  G    GGY+GS D G G      
Sbjct: 306 SSGYGNPGYGSGAAHSGYGVPGA-APPTQSPSGYSNQGY-GYGGYSGS-DSGYGNQAAYG 365

[Close]
BLAST of CmaCh11G014540 vs. ExPASy Swiss-Prot
Match: P09651 (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32
Identity = 125/346 (36.13%), Postives = 169/346 (48.84%), Query Frame = 0 

Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE- 106
           K+F+GGL  ETT     +HF ++G +TD V+M+D  T   RGFGFVTYA    VD  +  
Sbjct: 15  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query: 107 DSHIINGKHVEIKRTIPKGSSS--SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F QYG+++  
Sbjct: 75  RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           +IM D  + + RGF F+TF+   +VD+++         G   E++KA  K+     + S+
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYH-TVNGHNCEVRKALSKQEMASASSSQ 194

Query: 227 RYHDSRPSYSGGYGDAY---------GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGS 286
           R      ++ GG G  +         G F G G  GG R GG YG  G  Y G+G  GG 
Sbjct: 195 RGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGY 254

Query: 287 DFSGYGMYGTSSIGAYREDPSMGYSARYGSGFSRGYDLRG-GYGGPDESYSAYNTGGAPN 346
              G G                G S  YGSG  +GY  +G GYGG   SY +YN GG   
Sbjct: 255 GGGGPGY--------------SGGSRGYGSG-GQGYGNQGSGYGG-SGSYDSYNNGGGGG 314

Query: 347 TGGYAGSYDMGIGAGYPAGGRGSIYGSRGG---GGGYDGAGSTPSG 377
            GG +GS + G G  Y   G  +   S  G   GG + G  S P G
Sbjct: 315 FGGGSGS-NFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYG 342

[Close]
BLAST of CmaCh11G014540 vs. ExPASy Swiss-Prot
Match: Q08473 (RNA-binding protein squid OS=Drosophila melanogaster OX=7227 GN=sqd PE=1 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 8.3e-32
Identity = 130/362 (35.91%), Postives = 173/362 (47.79%), Query Frame = 0 

Query: 13  GVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEI 72
           G TNG  D+   ++ + D  R             K+FVGGL  ETT  +  +HFG+YGEI
Sbjct: 36  GSTNGSSDNQSAASGQRDDDR-------------KLFVGGLSWETTEKELRDHFGKYGEI 95

Query: 73  TDSVIMKDRKTGHPRGFGFVTYADPSVVDKV-IEDSHIINGKHVEIKRTIPKGSSSSRDF 132
               +  D +TG  RGF F+ + +   +DKV   D HIIN K V+ K+   +        
Sbjct: 96  ESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHG------ 155

Query: 133 KTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDEL 192
              KIFVGG+ T + ++E + +F Q+G + E ++  D   S+ +GF FITF++EQ V +L
Sbjct: 156 ---KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDL 215

Query: 193 LANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGAGYGGG 252
           L    + + AG +V++K+A PK  N                 GG           G  GG
Sbjct: 216 LKTPKQ-KIAGKEVDVKRATPKPEN--------------QMMGGM--------RGGPRGG 275

Query: 253 FRAG-GPYGARGG------SYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGS 312
            R G G YG RGG        G YGGYGG    GYG YG    G Y       Y+  Y +
Sbjct: 276 MRGGRGGYGGRGGYNNQWDGQGSYGGYGG----GYGGYGAGGYGDY-------YAGGYYN 335

Query: 313 GFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGG 367
           G+  GYD   GYGG  E  + Y  GG  N GG  G      G G P GG G   G + GG
Sbjct: 336 GYDYGYD-GYGYGGGFEG-NGYGGGGGGNMGGGRGG---PRGGGGPKGGGGFNGGKQRGG 336

[Close]
BLAST of CmaCh11G014540 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-31
Identity = 129/342 (37.72%), Postives = 172/342 (50.29%), Query Frame = 0 

Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-E 106
           K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 107 DSHIINGKHVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F +YG+++  
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKALSKQ-EMQSAGSQ 215

Query: 227 RYHDSRPSYSGGYGDAYGEFGGAGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGY 286
           R    R   SG +    G FGG   GG F  GG +G RGG  GG GG    YGG D  GY
Sbjct: 216 R---GRGGGSGNFMGRGGNFGGG--GGNFGRGGNFGGRGGYGGGGGGSRGSYGGGD-GGY 275

Query: 287 GMYGTSSIGAYREDPSMGYSAR--YGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGY 346
             +G    G Y   P  GYS+R  YG G     +  GGYGG    Y  YN GG    G Y
Sbjct: 276 NGFGGDG-GNYGGGP--GYSSRGGYGGGGPGYGNQGGGYGGGGGGYDGYNEGGNFGGGNY 335

Query: 347 AGSYDMGIGAGYPAGGRGSIYG-SRGGGGGYDGAGSTPSGRY 379
            G  +      Y +G + S YG  +GG  G   +GS   G Y
Sbjct: 336 GGGGNYNDFGNY-SGQQQSNYGPMKGGSFGGRSSGSPYGGGY 365

[Close]
BLAST of CmaCh11G014540 vs. ExPASy Swiss-Prot
Match: Q6URK4 (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-31
Identity = 129/342 (37.72%), Postives = 172/342 (50.29%), Query Frame = 0 

Query: 47  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-E 106
           K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 107 DSHIINGKHVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F +YG+++  
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK 226
           ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKALSKQ-EMQSAGSQ 215

Query: 227 RYHDSRPSYSGGYGDAYGEFGGAGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGY 286
           R    R   SG +    G FGG   GG F  GG +G RGG  GG GG    YGG D  GY
Sbjct: 216 R---GRGGGSGNFMGRGGNFGGG--GGNFGRGGNFGGRGGYGGGGGGSRGSYGGGD-GGY 275

Query: 287 GMYGTSSIGAYREDPSMGYSAR--YGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGY 346
             +G    G Y   P  GYS+R  YG G     +  GGYGG    Y  YN GG    G Y
Sbjct: 276 NGFGGDG-GNYGGGP--GYSSRGGYGGGGPGYGNQGGGYGGGGGGYDGYNEGGNFGGGNY 335

Query: 347 AGSYDMGIGAGYPAGGRGSIYG-SRGGGGGYDGAGSTPSGRY 379
            G  +      Y +G + S YG  +GG  G   +GS   G Y
Sbjct: 336 GGGGNYNDFGNY-SGQQQSNYGPMKGGSFGGRSSGSPYGGGY 365

[Close]
BLAST of CmaCh11G014540 vs. ExPASy TrEMBL
Match: A0A6J1JLH8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486284 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 8.5e-213
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 RGGGGGYDGAGSTPSGRYHPYGR 384
           RGGGGGYDGAGSTPSGRYHPYGR
Sbjct: 361 RGGGGGYDGAGSTPSGRYHPYGR 383

[Close]
BLAST of CmaCh11G014540 vs. ExPASy TrEMBL
Match: A0A6J1EK86 (heterogeneous nuclear ribonucleoprotein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111435320 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.5e-206
Identity = 375/388 (96.65%), Postives = 378/388 (97.42%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYS YN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 R-----GGGGGYDGAGSTPSGRYHPYGR 384
           R     GGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGGGGGGYDGAGSTPTGRYHPYGR 388

[Close]
BLAST of CmaCh11G014540 vs. ExPASy TrEMBL
Match: A0A6J1F7E2 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita moschata OX=3662 GN=LOC111441536 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 3.2e-188
Identity = 347/393 (88.30%), Postives = 357/393 (90.84%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD K ND  TNGEH+D K  NH+DDGSRHD PSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED+HIINGK VEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEV+EHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVD+LLANGNRLE AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  IGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARG---GGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYD RGGYGGPDESY AYN+  APNTGGYAGSYDMGIG GYP+GGRGS YGS
Sbjct: 301 RYGAGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGS 360

Query: 361 R----------GGGGGYDGAGSTPSGRYHPYGR 384
           R          GGGGGYDGAGS PSGRYHPYGR
Sbjct: 361 RGGGGGGGGGGGGGGGYDGAGSAPSGRYHPYGR 390

[Close]
BLAST of CmaCh11G014540 vs. ExPASy TrEMBL
Match: A0A6J1J2Y6 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481383 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 4.2e-188
Identity = 346/391 (88.49%), Postives = 357/391 (91.30%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD K ND  TNGEH+D K  NH+DDGSRHD PSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED+HIINGK VEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEV+EHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVD+LLANGNRLE AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKSNPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  IGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARG---GGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYD RGGYGGPDESY AYN+  APNTGGYAGSYDMGIG GYP+GGRGS YGS
Sbjct: 301 RYGAGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGS 360

Query: 361 R--------GGGGGYDGAGSTPSGRYHPYGR 384
           R        GGGGGYDGAGS PSGRYHPYGR
Sbjct: 361 RGGGGGGGGGGGGGYDGAGSAPSGRYHPYGR 388

[Close]
BLAST of CmaCh11G014540 vs. ExPASy TrEMBL
Match: A0A0A0LG75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G839850 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.8e-186
Identity = 343/386 (88.86%), Postives = 356/386 (92.23%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD K ND  TNGEH+D K  NH+DDGSRHD PSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED+HIINGK VEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG V+EHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVD+LLANGNRLE AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGG FRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  +GAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGSFRAGGPYGARG---GGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+ FSRGYD RGGYGGPDESY AYN+GGAP+TGGYAGSYDMG+G GY AGGRGS YGS
Sbjct: 301 RYGASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGS 360

Query: 361 R---GGGGGYDGAGSTPSGRYHPYGR 384
           R   GGGGGYDGAGS PSGRYHPYGR
Sbjct: 361 RGGGGGGGGYDGAGSAPSGRYHPYGR 383

[Close]
BLAST of CmaCh11G014540 vs. NCBI nr
Match: XP_022989120.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 749.2 bits (1933), Expect = 1.8e-212
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 RGGGGGYDGAGSTPSGRYHPYGR 384
           RGGGGGYDGAGSTPSGRYHPYGR
Sbjct: 361 RGGGGGYDGAGSTPSGRYHPYGR 383

[Close]
BLAST of CmaCh11G014540 vs. NCBI nr
Match: KAG7022708.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 376/383 (98.17%), Postives = 380/383 (99.22%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSH+INGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHMINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYSAYN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 RGGGGGYDGAGSTPSGRYHPYGR 384
           RGGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGYDGAGSTPTGRYHPYGR 383

[Close]
BLAST of CmaCh11G014540 vs. NCBI nr
Match: XP_023530403.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 730.7 bits (1885), Expect = 6.4e-207
Identity = 377/387 (97.42%), Postives = 379/387 (97.93%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYSAYN+GGAPNTGGYAG YDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGIYDMGIGAGYPAGGRGSIYGS 360

Query: 361 R----GGGGGYDGAGSTPSGRYHPYGR 384
           R    GGGGGYDGAGSTPSGRYHPYGR
Sbjct: 361 RGGGGGGGGGYDGAGSTPSGRYHPYGR 387

[Close]
BLAST of CmaCh11G014540 vs. NCBI nr
Match: XP_022928542.1 (heterogeneous nuclear ribonucleoprotein A3-like [Cucurbita moschata])

HSP 1 Score: 726.9 bits (1875), Expect = 9.3e-206
Identity = 375/388 (96.65%), Postives = 378/388 (97.42%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYS YN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360

Query: 361 R-----GGGGGYDGAGSTPSGRYHPYGR 384
           R     GGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGGGGGGYDGAGSTPTGRYHPYGR 388

[Close]
BLAST of CmaCh11G014540 vs. NCBI nr
Match: KAG6588940.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 725.7 bits (1872), Expect = 2.1e-205
Identity = 375/390 (96.15%), Postives = 379/390 (97.18%), Query Frame = 0 

Query: 1   MSENSMDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGASAGKIFVGGLPRETTSA 60
           MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRT 120
           QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGK VEIKRT
Sbjct: 61  QFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY
Sbjct: 181 TFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240

Query: 241 GEFGGAGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300
           GEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA 300

Query: 301 RYGSGFSRGYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGS 360
           RYG+GFSRGYDLRGGYGGPDESYSAYN+GGAPNTGGYAGSY+MGIGAGYPAGGRGSIYGS
Sbjct: 301 RYGAGFSRGYDLRGGYGGPDESYSAYNSGGAPNTGGYAGSYNMGIGAGYPAGGRGSIYGS 360

Query: 361 R-------GGGGGYDGAGSTPSGRYHPYGR 384
           R       GGGGGYDGAGSTP+GRYHPYGR
Sbjct: 361 RGGGGGGGGGGGGYDGAGSTPTGRYHPYGR 390

[Close]
BLAST of CmaCh11G014540 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.6 bits (984), Expect = 1.8e-106
Identity = 246/429 (57.34%), Postives = 282/429 (65.73%), Query Frame = 0 

Query: 6   MDFKVNDGVTNGEHDDPKTSNHEDDGSRHDRPSHGDGA-SAGKIFVGGLPRETTSAQFVN 65
           MD    + V   E  DPK S   +D     +P  G G  SAGKIFVGGL RETTSA+F+ 
Sbjct: 1   MDPYGTETVIEDEIHDPKPSEDIEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFLK 60

Query: 66  HFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKHVEIKRTIPKG 125
           HFG+YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI+D+HII GK VEIKRTIP+G
Sbjct: 61  HFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRG 120

Query: 126 SSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFET 185
           S SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE++EHQIMRDHST RSRGFGF+T+E+
Sbjct: 121 SMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYES 180

Query: 186 EQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFG 245
           E  VD LLA GNR+E +G+QVEIKKAEPKK N    PSKR+ DSR ++ GGYGD YG   
Sbjct: 181 EDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYGDGYGGGH 240

Query: 246 GAGY---GGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYG-TSSIGAYREDPSMGYSA 305
           G GY   GG +++GG YG  GG  GGYGGYGG +F GYG  G    +G YR +P++GYS 
Sbjct: 241 GGGYGGPGGPYKSGGGYG--GGRSGGYGGYGG-EFGGYGGGGYGGGVGPYRGEPALGYSG 300

Query: 306 RY---GSGFSR-GYDL---------------------RGGYGGPDESY---------SAY 365
           RY   G G++R GY +                      GGYGGP  SY           Y
Sbjct: 301 RYGGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGY 360

Query: 366 NTG-GAPNTGGY--AGSYDM---------GIGAGYPAGGRGSIYGSRGGGGGYDGAGSTP 384
             G G    GGY   G YDM         G GAG    G GS YG  GG GGY G G   
Sbjct: 361 GGGMGGAGGGGYRGGGGYDMGGVGGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGGG--- 420

[Close]
BLAST of CmaCh11G014540 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-85
Identity = 206/367 (56.13%), Postives = 246/367 (67.03%), Query Frame = 0 

Query: 32  SRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGF 91
           SR+D    GDGAS GKIF+GGL ++TT+  F  HFG+YGEITDSVIM+DR TG PRGFGF
Sbjct: 5   SRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGF 64

Query: 92  VTYADPSVVDKVIEDSHIINGKHVEIKRTIPKGS--SSSRDFKTKKIFVGGIPTSVDEDE 151
           +T+ADPSVVDKVIED+H+INGK VEIKRTIPKG+  + S+D KTKKIFVGGIP++V EDE
Sbjct: 65  ITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDE 124

Query: 152 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 211
            +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VDELL+ GN ++ A +QVEIKK
Sbjct: 125 LKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKK 184

Query: 212 AEPKKA---NPPPAPS-KRYHDSRPSYSGGYGDAYGEFGGAGYG---GGFRA-GGPYGAR 271
           AEPKK+   +PP   S  R   S  SY+  YG  YG F G GYG   G  R+ GGP    
Sbjct: 185 AEPKKSLNRSPPSYGSHPRGRSSNDSYA-SYGGPYGGFDG-GYGHPPGPIRSHGGPASRY 244

Query: 272 GGSYG-GYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSAR---YGSGF-SRGYDLRGGY 331
            G YG G G  G     GY  YG  S+G YR +P +GYS+R   YGSGF   GY  RGG 
Sbjct: 245 AGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYG-RGGE 304

Query: 332 GGPDESYSAYNTGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGYDGAGSTPSG 384
           G    +Y  Y  GG    GGY G    G G  Y +GG G   GS  G GG  G G + S 
Sbjct: 305 G----AYLGYPRGGGEGYGGYGGP---GYGGAYESGGPG---GSYEGAGGPYGRGYSSSS 358

[Close]
BLAST of CmaCh11G014540 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 253.8 bits (647), Expect = 2.2e-67
Identity = 119/180 (66.11%), Postives = 149/180 (82.78%), Query Frame = 0 

Query: 32  SRHDRPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGF 91
           SR+D    GDGAS GKIF+GGL ++TT+  F  HFG+YGEITDSVIM+DR TG PRGFGF
Sbjct: 5   SRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGF 64

Query: 92  VTYADPSVVDKVIEDSHIINGKHVEIKRTIPKGS--SSSRDFKTKKIFVGGIPTSVDEDE 151
           +T+ADPSVVDKVIED+H+INGK VEIKRTIPKG+  + S+D KTKKIFVGGIP++V EDE
Sbjct: 65  ITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDE 124

Query: 152 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 210
            +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VDELL+ GN ++ A +QV + K
Sbjct: 125 LKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVSLYK 184

[Close]
BLAST of CmaCh11G014540 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-54
Identity = 147/357 (41.18%), Postives = 199/357 (55.74%), Query Frame = 0 

Query: 36  RPSHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYA 95
           R S    +S GK+FVGG+  ETT+  F N+FG++GE+ DSVIM DR TG+PRGFGFVT+A
Sbjct: 56  RHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFA 115

Query: 96  DPSVVDKVIEDSHIINGKHVEIKRTIPKGSSSS---RDFKTKKIFVGGIPTSVDEDEFRD 155
           D +V +KV+E+ H+I+ + V++KRT+P+G   +      KT+KIFVGG+P  ++EDE ++
Sbjct: 116 DSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKN 175

Query: 156 FFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEP 215
           +F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E    QVEIK+AEP
Sbjct: 176 YFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEP 235

Query: 216 KKANPPPA----PSKRYHDSRPSYSGGYGDAYGEFGGAGYGGGFRAGGPYGARGGSYGGY 275
           K+     +     +   +D   SYSG   + Y  +  +GYGG              YGGY
Sbjct: 236 KRTGRDNSFRSYGASGKYDQEDSYSGKANEDYSMY--SGYGG--------------YGGY 295

Query: 276 GGYGGSDF-SGYGMYGTSSIGAYREDPSMGYSARYGSGFSRGYDLRGGYGGPDESYSAYN 335
           G Y G+   +  G YG                  YG G+  GY    GYGG       Y 
Sbjct: 296 GAYAGNSMVNPAGFYG------------------YGGGYGYGY----GYGG-QMFNMGYG 355

Query: 336 TGGAPNTGGYAGSYDMGIGAGYPAG---GRGSIYGSRGGGGGYDGAGSTPSGRYHPY 382
            GG  + G     Y +   A Y  G   G G+   S G G G +G+G     RYHPY
Sbjct: 356 AGGYSHMG---SGYGVAAAAAYGGGKSHGNGNNGSSSGKGNGTNGSG---PDRYHPY 367

[Close]
BLAST of CmaCh11G014540 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-41
Identity = 149/398 (37.44%), Postives = 208/398 (52.26%), Query Frame = 0 

Query: 46  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE 105
           GK+FVGG+  ET   +   HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 106 DSHIINGKHVEIKRTIPK--------------GSSSSRDF--KTKKIFVGGIPTSVDEDE 165
           + H I+ + V++KR + +                SS  D   KTKKIFVGG+P ++ ++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 166 FRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK 225
           FR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    + +G QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 226 AEPKKANP----------PPAPSKRYHDSRPSYSG-----------GYGDAYGEFGGAGY 285
           A PK ANP               + Y  +  SY G             G+    +G +GY
Sbjct: 186 ALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 245

Query: 286 GGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYRED----P 345
           G G+     G  YGA GG  G  GGYG    +GYG        YG+S+  A R       
Sbjct: 246 GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPA 305

Query: 346 SMGY-SARYGSGFSR-GYDLRGGYGGPDESYSAYNTGGAPNTGGYAGSYDMGIG------ 383
           S GY +  YGSG +  GY + G    P +S S Y+  G    GGY+GS D G G      
Sbjct: 306 SSGYGNPGYGSGAAHSGYGVPGA-APPTQSPSGYSNQGY-GYGGYSGS-DSGYGNQAAYG 365

The following BLAST results are available for this feature:
BLAST of CmaCh11G014540 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0341.7e-4037.44Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
P096511.3e-3236.13Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE... [more]
Q084738.3e-3235.91RNA-binding protein squid OS=Drosophila melanogaster OX=7227 GN=sqd PE=1 SV=3[more]
Q8BG052.4e-3137.72Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P... [more]
Q6URK42.4e-3137.72Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrn... [more]
BLAST of CmaCh11G014540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JLH88.5e-213100.00heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1EK864.5e-20696.65heterogeneous nuclear ribonucleoprotein A3-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1F7E23.2e-18888.30heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1J2Y64.2e-18888.49heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A0A0LG751.8e-18688.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G839850 PE=4 SV=1[more]
BLAST of CmaCh11G014540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989120.11.8e-212100.00heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima][more]
KAG7022708.11.2e-20898.17Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros... [more]
XP_023530403.16.4e-20797.42heterogeneous nuclear ribonucleoprotein 1 [Cucurbita pepo subsp. pepo][more]
XP_022928542.19.3e-20696.65heterogeneous nuclear ribonucleoprotein A3-like [Cucurbita moschata][more]
KAG6588940.12.1e-20596.15Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp... [more]
BLAST of CmaCh11G014540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G40490.11.8e-10657.34RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.21.3e-8556.13RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.12.2e-6766.11RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G17640.12.7e-5441.18RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G14300.11.2e-4137.44RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 135..208
e-value: 3.0E-20
score: 83.3
coord: 47..118
e-value: 1.6E-21
score: 87.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 48..114
e-value: 5.7E-15
score: 54.9
coord: 136..205
e-value: 3.8E-16
score: 58.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 46..122
score: 16.244303
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 134..212
score: 19.075499
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 123..222
e-value: 3.6E-25
score: 90.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 45..122
e-value: 2.9E-24
score: 87.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availablePANTHERPTHR48033:SF5NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 6..383
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 6..383
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 40..126
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 130..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G014540.1CmaCh11G014540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0048578 positive regulation of long-day photoperiodism, flowering
biological_process GO:0048576 positive regulation of short-day photoperiodism, flowering
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003730 mRNA 3'-UTR binding
molecular_function GO:0097157 pre-mRNA intronic binding
molecular_function GO:0003676 nucleic acid binding