CmaCh11G014270 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G014270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr11: 9405006 .. 9409201 (-)
RNA-Seq ExpressionCmaCh11G014270
SyntenyCmaCh11G014270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGGGAAATTCACGAGGCGCCTAAAATCTCAACCGCCCATCAAAGTCCAACCCACAGGAAACAGGTACATAACTCTTAAGCCCTGTGACTCTCCCTCCCCTTTAATTTTCTTCTCTTTCAGTGCCCTCTTTTAAGTCAAAAAGGTAAGGCATCACGGGTCTTTTCCTTCTTTAGCTGCATGAAACAAATTACTTAATTTGCTCATTTCCATGTCTACGCTGTAATTTTGGTCATTGCAGTAAATGGTAACTTTTTTTTGTTCTTGTTCACTCCCCTTTGTTGACTATACTTTTAATTGTTTAAAATTAAAATTTACTATACACTGTTTAACACAATTTACTATACACTGCTTAACACTAGGAAGATAGTAAAATTATTCTAGCACGATAGAGATTTATTACGCACAAGGTTAAAGGAAGTTGAATTACAAATTTAGTTCATATACCCGAGATTACCTGAGATTGTTTATTTAATCTCTTTATTCTAAAATGTTTCAGTCATGATTCTTATTAGTTTTTCACATTAATATCAATGCTTAAATGTTGACATACCTTATAGATTGCAGATACGACATACAATACTCGAGGGTAGACCAATTAGATCAAACCAAGTAAGAATTTTAAGTATACCCGAGATTACCCGAGATTGTTTATTTAATAATCTCTTTATTCTAAAATGTTTCCGTCATGATTCTTATTAGTTTTTGACATTAATATCAATTCCTAAATGTTGACATGCCTTATAAATTGCAGATACAACATCCAATACTCGGGAGTAGACCAATTAGATCAAACCAAGTAAGAAATTTATGTTTGGTATTGCATTGAAAAATTGATTATTAGTCCAATTAGCATGTCATTTAATGTTTAAGTAGAGATTTATTAAATTAAAGTTGAAGGTCAGTAGATGTTTATTGAAATCAAATTGTAAAGTAAGATTAAATGATAGAAATATTAGTTGATGCTTAGGAGCTCTTGATTAGCAAAAAATATTCTAGAATAAAGCGATAGAAAGATACTTAGAACTCTTTTACAGTGACAGAAATAGTGGCAAATAGAGGCTATATTGAAATGTGCAGATTCTAAGAATAAATATATAATGACGAGAATCGTATTGCTCCCCACTGGAATAGCATCTTCTTATTCATTATTTAAATTTCAATGCCTTTCTTATTTTTTAGACTGAAAATTCATAGGTCTCTTCCTTCACATCAATAACATTCTTTGTACTATCTTTCATTTGAAAATATGTTAGAACATTTCTCCTTTTTGACTCCTTTTTGGAGACTAAAGTGGGGCTTTATTTCACCACAAACATTGGAGCACATTTCAGTTCTAGATTCTTAAATCATAATTGGAGATTTGATAAAATCTTACATATCTAGCTAGCATACCTTACCTATATTGATTGTTCATTGTTTGGAGTAATAGCTTCGAGTTTGAGAAAGATCTTTATTTAAATATGCTGCATCTTTGATTTCTAGTCTCCTGCATCAATAGAACTGAGTTAGTTATCATAGATTGCTTTATGAAGGCTGTTTGTTTTTTAGCTTATTACGGTTCAAGACATTGTCAAGACATTGTCATCGAAGTTTTTATTGGGTTAGTTATTTGATAATATGGTTAGAAACTTTGAATATTGAAAATCCTTATTAAGAATCTTCTATTCGATTGGATAGACATACAGTCACAACAAATATCAAGAAATCGAAAGACATACAAATCATTAGAAATTGGTCGTCTCAGTGTACACACTTATGAAGTAGTATTATTCCCACCTATAATGACAAGTAATTTCTCCCAAGTAATTCAACTTTCATGCACACAATTAGGTAGTTTTCTTATGTCCTATGTAATTCTGTGCACACAAACAACTTTGGTAAGTACTATGATGTCTAGGCACATATTTAGGTAATTGTCACACACAAATTAGACTAAAGTAATTTTCATGCACAACTATGTATATTATACATGGCTAGCTTATCGCCTTACACACCACTAGATGTTAATTTCCATAAGTTAAAGTAAAGTCTTCCAAACTCTCGGTTATGTGTCACTAGAAATTGTTTGTTGAACATATCACAGGGTCAAAGTTAGTATAACTTTTCATGATATTTACTTGTATAATAATATCATGAGATGCTACCACAATTGAGGCTCGACACTACTGAGTATCAATACTCATCAATTGGTGTAAAGTCTTCCAAACTCTCGGTTATGTGTCACTTGAAATTGTTTGTTGAACATATCATGGAGTCGAAGTTAGCATAACTTCTACGTTCATGATATTTACCTATTTAATATCATGAGATGCTACCACAATTGAGGCTCGACAATACTGAATGCCAATATTTATCAATTGGTGTAAAGTCTTCCAGACTCTTGTTTATGCATCTCTAAAGATTGTTGAATGTGTCACGGAGTAAAAGTCAATATACTTTCTACGCTAATATTATTTTTGATTTTAAAAAGCTAAACAAATTTTGAAGGAAAAAAAAATAATAATCTAAACATAAAATTTCCTTTTTAAAAATATTTCTAATTTGCAATTTTGCATAATAATTTAAAATTAATTTGGATTTAGATTTTTTTTCCCCAAAATTAAAATAAGTTCAAACAAATCCTGAATTAGTTATTTTCCTCCCAGCCTCGTAAATCCACACAAAATTAAAATAATAATTCAGCATCCTTCAATCCCACAGCGTCCGTTTTAACAGTTTTCCCACATTCCGTGCTCCTCTAGAAGACCGAGCTATAAAATATAGAGGCAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACGAACTCCAATTATACTGTTAAACGGTTAAAAAAAGTATCGATATTACCTCTAGAATTTTTAATTTTTTTTTTTAAAAAAAATACCCTTATTATTTTTAATTAATTTTTTTTTAATGGTTAATATTTTATTTCAAAAATTATCTCCAAACCCTAAACACCGAACATTTTCCGTCCCCCTGTTGGACCCAATCTTCACCCACCCTGATCCAATAATATACATTTACTTAGTTAATAAATATATATATATATTTTTAAGAATGGAAGCTATTGAAATTTGAATGTTTAGAAATTAAGTTGAATATGATATTATTATTTTCCTTACAAAATATTATTGAATTTATTATTATTTTTACATTTTAAATATAAATTGTACCGAAAATGAAAATTATTCATGAACATTTTTTGAAAATTAATTTTGCGATGATGAGAAATAAAATAAGAAGCAATGACGGAGATGAGGAAAACTTCTCCGCTCTCTCACTTTGTGGATATCTCTAGTGGACGATCTTAAACTTAAGTCGGCTTGGTTGTTCAGTTCTCGCCCGTTTTGATTGTTTAACTTTGTTTTTACCGTGTTCGACTATCGATTATATATATATATATATTATAATTATTGTGTTTGTGACTTGACCAAAAGAACCAATAATAGTCCAAAAAGAAGAGGGGCAAGAGAAGGCGAAGAAACGGACGTGTATAAAAGAGATAGCGTTTGTTAGTGCAGAAAATAACCGATGTGGGACTGAAAAAACACTCGTCTTCTTCAGGCAAAATCCATGGGGAGAGGAAAAATACACTCACTCTTCTCTCTCTACTTGTGCTTTTCTTGTGCTCACTATTATTAATTTCTCTCGCTTTTTCCCCCTTTCTCTCTCTACCCAACCCAGAAATACAGTCACCAACAAACCCATCATCATTTCCAGTACTCGAAGGAGGAACAATCGCCTCTGTGCCGACGAATTTCTGTCACTGA

mRNA sequence

ATGCATGGGAAATTCACGAGGCGCCTAAAATCTCAACCGCCCATCAAAGTCCAACCCACAGGAAACAGATTGCAGATACGACATACAATACTCGAGGGTAGACCAATTAGATCAAACCAAATACAACATCCAATACTCGGGAGTAGACCAATTAGATCAAACCAAAAAATAACCGATGTGGGACTGAAAAAACACTCGTCTTCTTCAGGCAAAATCCATGGGGAGAGGAAAAATACACTCACTCTTCTCTCTCTACTTGTGCTTTTCTTGTGCTCACTATTATTAATTTCTCTCGCTTTTTCCCCCTTTCTCTCTCTACCCAACCCAGAAATACAGTCACCAACAAACCCATCATCATTTCCAGTACTCGAAGGAGGAACAATCGCCTCTGTGCCGACGAATTTCTGTCACTGA

Coding sequence (CDS)

ATGCATGGGAAATTCACGAGGCGCCTAAAATCTCAACCGCCCATCAAAGTCCAACCCACAGGAAACAGATTGCAGATACGACATACAATACTCGAGGGTAGACCAATTAGATCAAACCAAATACAACATCCAATACTCGGGAGTAGACCAATTAGATCAAACCAAAAAATAACCGATGTGGGACTGAAAAAACACTCGTCTTCTTCAGGCAAAATCCATGGGGAGAGGAAAAATACACTCACTCTTCTCTCTCTACTTGTGCTTTTCTTGTGCTCACTATTATTAATTTCTCTCGCTTTTTCCCCCTTTCTCTCTCTACCCAACCCAGAAATACAGTCACCAACAAACCCATCATCATTTCCAGTACTCGAAGGAGGAACAATCGCCTCTGTGCCGACGAATTTCTGTCACTGA

Protein sequence

MHGKFTRRLKSQPPIKVQPTGNRLQIRHTILEGRPIRSNQIQHPILGSRPIRSNQKITDVGLKKHSSSSGKIHGERKNTLTLLSLLVLFLCSLLLISLAFSPFLSLPNPEIQSPTNPSSFPVLEGGTIASVPTNFCH
Homology
[Close]
BLAST of CmaCh11G014270 vs. NCBI nr
Match: XP_023529888.1 (uncharacterized protein LOC111792611 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 54.7 bits (130), Expect = 7.4e-04
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0 

Query: 1  MHGKFTRRLKSQPPIKVQPTGNRLQIRHTILEGRPIRSNQIQHPILGSRPIRSNQKITDV 60
          MHGKFTRRLKSQPPIKVQPT NR  IR++ ++    + +Q ++ I  SR  + +Q   D+
Sbjct: 1  MHGKFTRRLKSQPPIKVQPTENRYDIRYSRID----QLDQTKYDIQYSRVDQLDQTKYDI 56

[Close]
BLAST of CmaCh11G014270 vs. NCBI nr
Match: XP_023529892.1 (uncharacterized protein LOC111792611 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 54.7 bits (130), Expect = 7.4e-04
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0 

Query: 1  MHGKFTRRLKSQPPIKVQPTGNRLQIRHTILEGRPIRSNQIQHPILGSRPIRSNQKITDV 60
          MHGKFTRRLKSQPPIKVQPT NR  IR++ ++    + +Q ++ I  SR  + +Q   D+
Sbjct: 1  MHGKFTRRLKSQPPIKVQPTENRYDIRYSRID----QLDQTKYDIQYSRVDQLDQTKYDI 56

[Close]
BLAST of CmaCh11G014270 vs. NCBI nr
Match: XP_023529890.1 (uncharacterized protein LOC111792611 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 54.7 bits (130), Expect = 7.4e-04
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0 

Query: 1  MHGKFTRRLKSQPPIKVQPTGNRLQIRHTILEGRPIRSNQIQHPILGSRPIRSNQKITDV 60
          MHGKFTRRLKSQPPIKVQPT NR  IR++ ++    + +Q ++ I  SR  + +Q   D+
Sbjct: 1  MHGKFTRRLKSQPPIKVQPTENRYDIRYSRID----QLDQTKYDIQYSRVDQLDQTKYDI 56

The following BLAST results are available for this feature:
BLAST of CmaCh11G014270 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh11G014270 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh11G014270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023529888.17.4e-0450.00uncharacterized protein LOC111792611 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023529892.17.4e-0450.00uncharacterized protein LOC111792611 isoform X4 [Cucurbita pepo subsp. pepo][more]
XP_023529890.17.4e-0450.00uncharacterized protein LOC111792611 isoform X3 [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh11G014270 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G014270.1CmaCh11G014270.1mRNA