CmaCh11G012160 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G012160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ribosomal protein S7
Location	Cma_Chr11: 7715043 .. 7715423 (+)
RNA-Seq Expression	CmaCh11G012160
Synteny	CmaCh11G012160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG

mRNA sequence

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG

Coding sequence (CDS)

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG

Protein sequence

MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYRKRGIAR

Homology

[Close]

BLAST of CmaCh11G012160 vs. ExPASy Swiss-Prot
Match: P92557 (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.5e-58
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIAR 127
           KRG AR
Sbjct: 121 KRGSAR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy Swiss-Prot
Match: Q9MF82 (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 3.9e-55
Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNF MKEGK T+VRAIVYQTFHR A+TE DVIKLM+DAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           C+VEKV VAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK LF EILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 121 KRGIAR 127
           KRGI+R
Sbjct: 121 KRGISR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy Swiss-Prot
Match: Q01902 (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-54
Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MG  DGEQK+LIKKLVNFRM +GK TRVRAIVY+TFHR A+TERDVIKLMVDAVDNIKPI
Sbjct: 1   MGDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WIL AAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGI+R
Sbjct: 121 KRGISR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy Swiss-Prot
Match: P26867 (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-32
Identity = 76/125 (60.80%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 3   GLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICE 62
           GL+G+QKQLIKKLV+  M +GK TR RAIVY+TFHR A    DVIKL+V+A++N+KPICE
Sbjct: 85  GLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLA-PHGDVIKLLVNAIENVKPICE 144

Query: 63  VEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYR-ISLEKFLFAEILDAYRK 122
           V+KV ++GT   VP I+A +RQ+TLAI W+LE+A KRR+  + ISL++ L+AEIL+A +K
Sbjct: 145 VKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQK 204

Query: 123 RGIAR 127
            GIAR
Sbjct: 205 MGIAR 208

[Close]

BLAST of CmaCh11G012160 vs. ExPASy Swiss-Prot
Match: Q3ZJ48 (30S ribosomal protein S7, chloroplastic OS=Tupiella akineta OX=160070 GN=rps7 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-12
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 10  QLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKVGV 69
           +LI  LVN  MK+GK +    IVYQT  + A+ TE+D I+++ +AV N KP+ EV+   V
Sbjct: 21  RLINMLVNRVMKDGKKSLAYKIVYQTMDQIAEKTEQDPIQILEEAVRNTKPLVEVKARRV 80

Query: 70  AGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYRKRG 124
            G+ Y VP  V  +R   LA+ W+L AA  R  S R ++ K L  E++DA +K G
Sbjct: 81  GGSAYQVPLEVNPERGTVLALQWVLAAA--RNRSGRSAIAK-LTNELIDASKKTG 132

[Close]

BLAST of CmaCh11G012160 vs. ExPASy TrEMBL
Match: A0A6B9MKJ0 (Ribosomal protein S7 OS=Hemiptelea davidii OX=63068 GN=rps7 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.1e-59
Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy TrEMBL
Match: A0A0M4R6T5 (Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy TrEMBL
Match: A0A142BZ01 (Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy TrEMBL
Match: A0A7D6C7C9 (Ribosomal protein S7 OS=Luffa acutangula OX=56866 GN=rps7 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. ExPASy TrEMBL
Match: A0A411GRV8 (Ribosomal protein S7 OS=Morus notabilis OX=981085 GN=rps7 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. NCBI nr
Match: QHD19691.1 (ribosomal protein S7 [Hemiptelea davidii])

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58
Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. NCBI nr
Match: XP_023521058.1 (uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI
Sbjct: 38  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 97

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 98  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 157

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 158 KRGIAR 163

[Close]

BLAST of CmaCh11G012160 vs. NCBI nr
Match: YP_009241662.1 (ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Morus notabilis] >YP_009913635.1 ribosomal protein S7 [Luffa acutangula] >QWQ49870.1 ribosomal protein S7 [Zelkova schneideriana] >AMP43645.1 ribosomal protein S7 [Ziziphus jujuba] >QBB08761.1 ribosomal protein S7 [Morus notabilis] >QLJ93024.1 ribosomal protein S7 [Luffa acutangula])

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. NCBI nr
Match: YP_009243658.1 (ribosomal protein S7 [Cannabis sativa] >ALF04068.1 ribosomal protein S7 [Cannabis sativa] >AMR97555.1 ribosomal protein S7 [Cannabis sativa] >ANC49137.1 ribosomal protein S7 [Cannabis sativa] >QJE38178.1 ribosomal protein S7 [Cannabis sativa] >QJI81308.1 ribosomal protein S7 [Cannabis sativa])

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. NCBI nr
Match: WP_131796637.1 (30S ribosomal protein S7 [Candidatus Frankia datiscae])

HSP 1 Score: 234.2 bits (596), Expect = 6.2e-58
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]

BLAST of CmaCh11G012160 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 224.6 bits (571), Expect = 4.6e-59
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIAR 127
           KRG AR
Sbjct: 121 KRGSAR 126

[Close]

BLAST of CmaCh11G012160 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 )

HSP 1 Score: 224.6 bits (571), Expect = 4.6e-59
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIAR 127
           KRG AR
Sbjct: 121 KRGSAR 126

The following BLAST results are available for this feature:

BLAST of CmaCh11G012160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92557	6.5e-58	92.06	Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1...	[more]
Q9MF82	3.9e-55	88.10	Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2	[more]
Q01902	1.5e-54	88.10	Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV...	[more]
P26867	2.1e-32	60.80	Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=...	[more]
Q3ZJ48	4.1e-12	42.61	30S ribosomal protein S7, chloroplastic OS=Tupiella akineta OX=160070 GN=rps7 PE...	[more]

BLAST of CmaCh11G012160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6B9MKJ0	6.1e-59	96.83	Ribosomal protein S7 OS=Hemiptelea davidii OX=63068 GN=rps7 PE=3 SV=1	[more]
A0A0M4R6T5	1.8e-58	96.03	Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=3 SV=1	[more]
A0A142BZ01	1.8e-58	96.03	Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1	[more]
A0A7D6C7C9	1.8e-58	96.03	Ribosomal protein S7 OS=Luffa acutangula OX=56866 GN=rps7 PE=3 SV=1	[more]
A0A411GRV8	1.8e-58	96.03	Ribosomal protein S7 OS=Morus notabilis OX=981085 GN=rps7 PE=3 SV=1	[more]

BLAST of CmaCh11G012160 vs. NCBI nr


Match Name	E-value	Identity	Description
QHD19691.1	1.3e-58	96.83	ribosomal protein S7 [Hemiptelea davidii]	[more]
XP_023521058.1	2.1e-58	96.03	uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]	[more]
YP_009241662.1	3.7e-58	96.03	ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Mor...	[more]
YP_009243658.1	3.7e-58	96.03	ribosomal protein S7 [Cannabis sativa] >ALF04068.1 ribosomal protein S7 [Cannabi...	[more]
WP_131796637.1	6.2e-58	95.24	30S ribosomal protein S7 [Candidatus Frankia datiscae]	[more]

BLAST of CmaCh11G012160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07696.1	4.6e-59	92.06	Ribosomal protein S7p/S5e family protein	[more]
ATMG01270.1	4.6e-59	92.06	mitochondrial ribosomal protein S7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 8..125 e-value: 1.5E-24 score: 86.4
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 3..126 e-value: 6.9E-34 score: 115.4
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 1..126
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 6..126 e-value: 6.6E-28 score: 99.2
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 9..124
None	No IPR available	PANTHER	PTHR11205:SF46	RIBOSOMAL PROTEIN S7	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G012160.1	CmaCh11G012160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome