CmaCh11G011910 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G011910
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box/LRR-repeat protein 3
Location	Cma_Chr11: 7070176 .. 7073216 (+)
RNA-Seq Expression	CmaCh11G011910
Synteny	CmaCh11G011910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCCATAATCCCACAAAACCCGAGAAATCAGAACACGAGAGAGAGAGGAGGAAGAACAACAGTAGAACACCATGATGGATTGGGTCGGCAATTCCGGTTCGGGTCAGATCCAAACGCTCTCCAAATCCGCCCACCACCCTCTCCTCCGCCTCCGCCTCCTCTTCCTCTTCGTCCCAACTTAGACTCCCCTTTCTCAATTCTTCAAATCTCTGTTGTTTTCACTTTGTTTCTTCAAAATCCGCTAATGCCTACACCATTTCCACTTCTCCTCAACTTCCCCCATGAAATCCTCATCCGTCTCCGCCAATATCTCACCGACGACTCCGATTCCAGATCCTGGCGGCTCGTCTGCAAGGACTTCTACCGCGTCGATCTAATCTCCCGCACAACTCTGCGAGTCCGTCGAATTGAGTTTCTCTCCAGTTCAATCGCCAAGTTTGAAGCTATCGATGAGTTGGATCTGTCGATTTGCCCTCGGATTAACGATGGGACGGTCTCGATCTTTCTGGGTATTGGGTTTTCAAGGCTGAGAAGTTTGATTCTAAGCCGATCGTCGGGGTTGAGCTACATGGGGTTGGAGAGGGTGATGCGGGCCTGCACGGGGCTGGAAATGGTCGACATGTCGTACAGTTGGGGGTTTGGGGATAGGGAAGCGGCGGCAGTGTCGAATTGTGCGGAGTTGAAGGAGGTGAGGTTGGATAAGTGTTTGGGGGTTACGGATGTGGGTTTGGCGAGGATTGTTGTTGGCTGTGGGAGGTTAGAGAGGCTTAGTTTGAAGTGGTGCTTGCAGGTTTCTGATCTTGGTGTTGAACTTTTGTGTAAGAAGAGCTTCGATTTGCGGGTTCTTGATTTGTCTTATCTCAAGGTTTGCTCCCCTCGTCTCTGTTCTTACGTTTGTTGACATTTACAAATTTTGAGAACATCAATTCAATGTAGTTTTATTGTGCATAAGGTTTGACTTCTACAGAAATTAGACAATTCTGAGTGTTTTTTTGGTTATTTTTGTTAAAATTAGCAAATGAATGTTACAGAATTTGAACACATGCTAAAAATGGCAACTCTTAACTAAGCAATCAGAGTAAAATTTGAAAATTTTGATATTTTATTTGACAAATTTTGATATTCTCTTTGAATTTTTTGTTTTCAAACGTTTTTAAGAACAGCTCCCAAACAATTCCAAACATATTCTTTTGGCAATTCTGGTTAAAATGTGTGAACTGAACTTCATGTTGGGTTAATAACAGGTGACAAATGAATCACTACGTGCAGTAGCTTCTTTGCCAAAGCTTGAGGTCTTAATTATGGTGGGCTGTCTTTCAGTTGACGATGTTGGTTTGCAGTATCTTGAACACGGGTGCCCATCTCTAAAGGTTCTTATGATCAAGTGCAGTATGATTCTTTTTGCTTAATACATTACCTAAATTCGAGCAAACTGTCAAGTCGGTCAGCTTGGTTAGTTATATGTTAGTATCATGATCTAATTGTACAAGCTTGCATGTTTTCAAATGGATTGTAGGAACTTGATATTTCAAGATGTGATGGCATTACACCATATGGCTTAACATCTGTTATAAGAGGTCATGATGGTCTTGAACAACTTGATGCAAGCTACTGCTTCTCTGTAAGATGATGCTGCATTTTTTCGATTTTGAGTTTGCCTTCTTTTTCTGTTATGAAGCTTCCATCTTTGGCTTTTGCTTCTAGGAGCTCTGCGCAGATTCTCTTTTCTGGCTGAAGAACCTGAAGTGTCTAAAAGCAATTAGGCTTGATGGTACTCAACTCTCGAGTGCGTTTTTCAACGTGATCAGCGTCCACAGCAAGTATTTGGTGGAACTTGGGTTGAGCAAATGCAACGGGGTAACTGATGCAAACATAATTCAGCTGATCACTCGCTGTATTGGCTTGAAAGTTCTTAATTTAACATGTTGCCACTCCATCACCGATGTGGCGATATCTTCAATGGCTAGCTCGTGCCAGAAACTCATGTCGCTGAAGTTAGAATCGTGCAACATGATCACTGAAAGAAGTCTTGATCGGCTTGGGTTATATTGCTCATTACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGTACTTTCATTATAACAAGTAATAACATACAACCACTTGAGTGAATCATTAAGCTAACTTGATTGTGTCCTCTCTTGCAGGACTTGAATGCTTATCAAAATGTTCACAATTGCTAAGCTTGAAACTAGGATTGTGCACAAACATAACAGACACAGGGTTGATCAAGATTGCTCGCAACTGCAAAAGGATTTATGAACTCGATTTGTACCGGTAATGTGAGAGTTCAGAAATTTATTAGATCTTTTTGAGTAACTACTCAAAAGAGGAGAATGTCATTCTATTTAACTCTTGAATTGCAGTTGTCTGGGAATTGGGGATGCCGGATTAGAAGCTCTATCAACTGGGTGCAAGAGATTAACGAAACTAAACTTGTCATACTGTAATAAGGTTACGGATAGAGGAATCGAGTGCGTCGGCCAGCTCGAAGAACTCTGCAGCTTAGAAATACGTGGGCTTCAGAATGTCACAAGCGTAGGTTTGACAGCAGTGGCATTTGGTTGTAAAAGATTAGTAGATTTGGATATGAAACAATGCCAGAATGTGGATGACTCAGGCTTTTGGGCACTTGGCTCCTATGCTCGGAATTTGCGTCAGGTATATGGATAGAGTCATTACATGTGTTGTTATGTCATTTGTATTTGGTTCTTGGAATGAGATCAAACAGCTGATTGTTGTTTGGATTGTGGCAGTTAAATGTGGGGTGTTGTGGTGTATCAGACGTGGGATTATGCATGATGATGGGGAACCTTTCATGCCTTCAGGATGCCAAGCTCGTGACCCTTAATAAAGTTTCAGTGCGAGGCTTCGAGCTAGCACTCAGGGCCTGCTGCCTCCGGGTCAAGAAAGTCAAGCTGCACGCATCTCTCAGGTTTATGCTCTCCTCAGAGATACTTGAAATTTTAAATGCTTGGGGTTGCAAGATTAGATGGGATTAA

mRNA sequence

AACTCCATAATCCCACAAAACCCGAGAAATCAGAACACGAGAGAGAGAGGAGGAAGAACAACAGTAGAACACCATGATGGATTGGGTCGGCAATTCCGGTTCGGGTCAGATCCAAACGCTCTCCAAATCCGCCCACCACCCTCTCCTCCGCCTCCGCCTCCTCTTCCTCTTCGTCCCAACTTAGACTCCCCTTTCTCAATTCTTCAAATCTCTGTTGTTTTCACTTTGTTTCTTCAAAATCCGCTAATGCCTACACCATTTCCACTTCTCCTCAACTTCCCCCATGAAATCCTCATCCGTCTCCGCCAATATCTCACCGACGACTCCGATTCCAGATCCTGGCGGCTCGTCTGCAAGGACTTCTACCGCGTCGATCTAATCTCCCGCACAACTCTGCGAGTCCGTCGAATTGAGTTTCTCTCCAGTTCAATCGCCAAGTTTGAAGCTATCGATGAGTTGGATCTGTCGATTTGCCCTCGGATTAACGATGGGACGGTCTCGATCTTTCTGGGTATTGGGTTTTCAAGGCTGAGAAGTTTGATTCTAAGCCGATCGTCGGGGTTGAGCTACATGGGGTTGGAGAGGGTGATGCGGGCCTGCACGGGGCTGGAAATGGTCGACATGTCGTACAGTTGGGGGTTTGGGGATAGGGAAGCGGCGGCAGTGTCGAATTGTGCGGAGTTGAAGGAGGTGAGGTTGGATAAGTGTTTGGGGGTTACGGATGTGGGTTTGGCGAGGATTGTTGTTGGCTGTGGGAGGTTAGAGAGGCTTAGTTTGAAGTGGTGCTTGCAGGTTTCTGATCTTGGTGTTGAACTTTTGTGTAAGAAGAGCTTCGATTTGCGGGTTCTTGATTTGTCTTATCTCAAGGTGACAAATGAATCACTACGTGCAGTAGCTTCTTTGCCAAAGCTTGAGGTCTTAATTATGGTGGGCTGTCTTTCAGTTGACGATGTTGGTTTGCAGTATCTTGAACACGGGTGCCCATCTCTAAAGGAACTTGATATTTCAAGATGTGATGGCATTACACCATATGGCTTAACATCTGTTATAAGAGGTCATGATGGTCTTGAACAACTTGATGCAAGCTACTGCTTCTCTGAGCTCTGCGCAGATTCTCTTTTCTGGCTGAAGAACCTGAAGTGTCTAAAAGCAATTAGGCTTGATGGTACTCAACTCTCGAGTGCGTTTTTCAACGTGATCAGCGTCCACAGCAAGTATTTGGTGGAACTTGGGTTGAGCAAATGCAACGGGGTAACTGATGCAAACATAATTCAGCTGATCACTCGCTGTATTGGCTTGAAAGTTCTTAATTTAACATGTTGCCACTCCATCACCGATGTGGCGATATCTTCAATGGCTAGCTCGTGCCAGAAACTCATGTCGCTGAAGTTAGAATCGTGCAACATGATCACTGAAAGAAGTCTTGATCGGCTTGGGTTATATTGCTCATTACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGACTTGAATGCTTATCAAAATGTTCACAATTGCTAAGCTTGAAACTAGGATTGTGCACAAACATAACAGACACAGGGTTGATCAAGATTGCTCGCAACTGCAAAAGGATTTATGAACTCGATTTGTACCGTTGTCTGGGAATTGGGGATGCCGGATTAGAAGCTCTATCAACTGGGTGCAAGAGATTAACGAAACTAAACTTGTCATACTGTAATAAGGTTACGGATAGAGGAATCGAGTGCGTCGGCCAGCTCGAAGAACTCTGCAGCTTAGAAATACGTGGGCTTCAGAATGTCACAAGCGTAGGTTTGACAGCAGTGGCATTTGGTTGTAAAAGATTAGTAGATTTGGATATGAAACAATGCCAGAATGTGGATGACTCAGGCTTTTGGGCACTTGGCTCCTATGCTCGGAATTTGCGTCAGTTAAATGTGGGGTGTTGTGGTGTATCAGACGTGGGATTATGCATGATGATGGGGAACCTTTCATGCCTTCAGGATGCCAAGCTCGTGACCCTTAATAAAGTTTCAGTGCGAGGCTTCGAGCTAGCACTCAGGGCCTGCTGCCTCCGGGTCAAGAAAGTCAAGCTGCACGCATCTCTCAGGTTTATGCTCTCCTCAGAGATACTTGAAATTTTAAATGCTTGGGGTTGCAAGATTAGATGGGATTAA

Coding sequence (CDS)

ATGCCTACACCATTTCCACTTCTCCTCAACTTCCCCCATGAAATCCTCATCCGTCTCCGCCAATATCTCACCGACGACTCCGATTCCAGATCCTGGCGGCTCGTCTGCAAGGACTTCTACCGCGTCGATCTAATCTCCCGCACAACTCTGCGAGTCCGTCGAATTGAGTTTCTCTCCAGTTCAATCGCCAAGTTTGAAGCTATCGATGAGTTGGATCTGTCGATTTGCCCTCGGATTAACGATGGGACGGTCTCGATCTTTCTGGGTATTGGGTTTTCAAGGCTGAGAAGTTTGATTCTAAGCCGATCGTCGGGGTTGAGCTACATGGGGTTGGAGAGGGTGATGCGGGCCTGCACGGGGCTGGAAATGGTCGACATGTCGTACAGTTGGGGGTTTGGGGATAGGGAAGCGGCGGCAGTGTCGAATTGTGCGGAGTTGAAGGAGGTGAGGTTGGATAAGTGTTTGGGGGTTACGGATGTGGGTTTGGCGAGGATTGTTGTTGGCTGTGGGAGGTTAGAGAGGCTTAGTTTGAAGTGGTGCTTGCAGGTTTCTGATCTTGGTGTTGAACTTTTGTGTAAGAAGAGCTTCGATTTGCGGGTTCTTGATTTGTCTTATCTCAAGGTGACAAATGAATCACTACGTGCAGTAGCTTCTTTGCCAAAGCTTGAGGTCTTAATTATGGTGGGCTGTCTTTCAGTTGACGATGTTGGTTTGCAGTATCTTGAACACGGGTGCCCATCTCTAAAGGAACTTGATATTTCAAGATGTGATGGCATTACACCATATGGCTTAACATCTGTTATAAGAGGTCATGATGGTCTTGAACAACTTGATGCAAGCTACTGCTTCTCTGAGCTCTGCGCAGATTCTCTTTTCTGGCTGAAGAACCTGAAGTGTCTAAAAGCAATTAGGCTTGATGGTACTCAACTCTCGAGTGCGTTTTTCAACGTGATCAGCGTCCACAGCAAGTATTTGGTGGAACTTGGGTTGAGCAAATGCAACGGGGTAACTGATGCAAACATAATTCAGCTGATCACTCGCTGTATTGGCTTGAAAGTTCTTAATTTAACATGTTGCCACTCCATCACCGATGTGGCGATATCTTCAATGGCTAGCTCGTGCCAGAAACTCATGTCGCTGAAGTTAGAATCGTGCAACATGATCACTGAAAGAAGTCTTGATCGGCTTGGGTTATATTGCTCATTACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGACTTGAATGCTTATCAAAATGTTCACAATTGCTAAGCTTGAAACTAGGATTGTGCACAAACATAACAGACACAGGGTTGATCAAGATTGCTCGCAACTGCAAAAGGATTTATGAACTCGATTTGTACCGTTGTCTGGGAATTGGGGATGCCGGATTAGAAGCTCTATCAACTGGGTGCAAGAGATTAACGAAACTAAACTTGTCATACTGTAATAAGGTTACGGATAGAGGAATCGAGTGCGTCGGCCAGCTCGAAGAACTCTGCAGCTTAGAAATACGTGGGCTTCAGAATGTCACAAGCGTAGGTTTGACAGCAGTGGCATTTGGTTGTAAAAGATTAGTAGATTTGGATATGAAACAATGCCAGAATGTGGATGACTCAGGCTTTTGGGCACTTGGCTCCTATGCTCGGAATTTGCGTCAGTTAAATGTGGGGTGTTGTGGTGTATCAGACGTGGGATTATGCATGATGATGGGGAACCTTTCATGCCTTCAGGATGCCAAGCTCGTGACCCTTAATAAAGTTTCAGTGCGAGGCTTCGAGCTAGCACTCAGGGCCTGCTGCCTCCGGGTCAAGAAAGTCAAGCTGCACGCATCTCTCAGGTTTATGCTCTCCTCAGAGATACTTGAAATTTTAAATGCTTGGGGTTGCAAGATTAGATGGGATTAA

Protein sequence

MPTPFPLLLNFPHEILIRLRQYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSSIAKFEAIDELDLSICPRINDGTVSIFLGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQYLEHGCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAIRLDGTQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDVAISSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKLNLSYCNKVTDRGIECVGQLEELCSLEIRGLQNVTSVGLTAVAFGCKRLVDLDMKQCQNVDDSGFWALGSYARNLRQLNVGCCGVSDVGLCMMMGNLSCLQDAKLVTLNKVSVRGFELALRACCLRVKKVKLHASLRFMLSSEILEILNAWGCKIRWD

Homology

[Close]

BLAST of CmaCh11G011910 vs. ExPASy Swiss-Prot
Match: Q8RWU5 (F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana OX=3702 GN=FBL3 PE=2 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 7.7e-131
Identity = 253/636 (39.78%), Postives = 377/636 (59.28%), Query Frame = 0


Query: 4   PFPLLLNFPHEILIRLRQYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSSIA 63
           PF LL      + I L     + SD +S+ L CK FY+++   R +L+  R ++L   + 
Sbjct: 12  PFDLLSE--ELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILT 71

Query: 64  KFEAIDELDLSICPRINDGTVSIFLGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEM 123
           ++    +LDL+ CPR+ D  +S+   +    LRSL LSRS   S  GL R+   C  L  
Sbjct: 72  RYRNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVE 131

Query: 124 VDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQV 183
           +D+S +    D +AA V+    L+ ++L +C  +TD+G+  I VGC +L  +SLKWC+ V
Sbjct: 132 IDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGV 191

Query: 184 SDLGVELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQYLEH 243
            DLGV LL  K  D+R LDLSYL +T + L  +  L  LE L++ GC  VDD  L+ L H
Sbjct: 192 GDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRH 251

Query: 244 GCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAI 303
            C SLK+LD S C  +T  GLTS++ G   L++LD S+C S +  D    LK +  L++I
Sbjct: 252 DCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSI 311

Query: 304 RLDGTQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSIT 363
           RLDG  ++      I      L E+ LSKC  VTD  +  L+ +   L+ L++TCC  ++
Sbjct: 312 RLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLS 371

Query: 364 DVAISSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLS 423
            V+I+ +A+SC  L+SLK+ESC++++  +   +G  C LLEELDLTD   ++D+GL+ +S
Sbjct: 372 RVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTD-NEIDDEGLKSIS 431

Query: 424 KCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKL 483
            C  L SLKLG+C NITD GL  I   C  + ELDLYR +GI D G+  ++ GC  L  +
Sbjct: 432 SCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETI 491

Query: 484 NLSYCNKVTDRGIECVGQLEELCSLEIRGLQNVTSVGLTAVAFGCKRLVDLDMKQCQNVD 543
           N+SYC  +TD+ +  + +   L + E RG  N+TS GL A+A  CKRL  +D+K+C +++
Sbjct: 492 NISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSIN 551

Query: 544 DSGFWALGSYARNLRQLNVGCCGVSDVGLCMMMGNLSCLQDAKLVTLNKVSVRGFELALR 603
           D+G  AL  +++NL+Q+NV    V++VGL + + N+ CLQ+  +V  + +   G   AL 
Sbjct: 552 DAGLLALAHFSQNLKQINVSDTAVTEVGL-LSLANIGCLQNIAVVNSSGLRPSGVAAALL 611

Query: 604 ACCLRVKKVKLHASLRFMLSSEILEILNAWGCKIRW 640
            C   ++K KLHASLR +L   ++  L A GC   W
Sbjct: 612 GCG-GLRKAKLHASLRSLLPLSLIHHLEARGCAFLW 642

[Close]

BLAST of CmaCh11G011910 vs. ExPASy Swiss-Prot
Match: Q9C5D2 (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.7e-45
Identity = 132/450 (29.33%), Postives = 214/450 (47.56%), Query Frame = 0


Query: 88  LGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSN-CAEL 147
           L  GF R+ +L L     +S +GL  + + CT L+ +D+   +  GD+  AAV   C +L
Sbjct: 135 LANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAVGKFCKQL 194

Query: 148 KEVRLDKCLGVTDVGLARIVVGCGR-LERLSLKWCLQVSDLGVELLCKKSFDLRVLDLSY 207
           +E+ L  C G+TDVG+  +VVGC + L+ + +    +++DL +E +      L VL L  
Sbjct: 195 EELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDS 254

Query: 208 LKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQYLEHGCPSLKELDISRCDGITPYGLT 267
             + ++ L AVA        + + C+SV DV    +   C SL+ L +      T  G+ 
Sbjct: 255 EYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMR 314

Query: 268 SVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAIRLDGT-QLSSAFFNVISVHSKY 327
           ++ +G   L+ L  S C+   C          K L+ + ++G   + +     I      
Sbjct: 315 AIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPR 374

Query: 328 LVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDVAISSMASSCQKLMSLKLES 387
           L EL L  C  + ++ + ++   C  L++L+L  C  I D+A+ S+A  C+ L  L +  
Sbjct: 375 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 434

Query: 388 CNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGL 447
           C  I  + +  +G +C  L EL L  C  V +K L  + K   L  L +  C  I+D G+
Sbjct: 435 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGI 494

Query: 448 IKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKLNLSYCNKVTDRGIECVGQ--- 507
             IAR C ++  LD+     IGD  L  L  GC  L  L LS+C+ +TD G+  + Q   
Sbjct: 495 TAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCK 554

Query: 508 LEELCSLEIRGLQNVTSVGLTAVAFGCKRL 532
           L E C +       +TS G+  V   C  +
Sbjct: 555 LLETCHMVY--CPGITSAGVATVVSSCPHI 581

[Close]

BLAST of CmaCh11G011910 vs. ExPASy Swiss-Prot
Match: Q708Y0 (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.7e-35
Identity = 120/447 (26.85%), Postives = 210/447 (46.98%), Query Frame = 0


Query: 91  GFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAELKEV 150
           G   LR + L     +S +GL  + R+C  +E +D+S   G  D    A++ NC  L ++
Sbjct: 165 GCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDL 224

Query: 151 RLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVE-LLCKKSFDLRVLDLSYLKV 210
            +D C GV + GL  I   C  L  +S++ C ++ D GV  LL +    L  + L  L V
Sbjct: 225 TIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNV 284

Query: 211 TNESLRAVASL-PKLEVLIMVGCLSVDDVGLQYLEH--GCPSLKELDISRCDGITPYGLT 270
           +  SL  +      +  L++ G   V++ G   + +  G   LK L +  C G+T  GL 
Sbjct: 285 SGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLE 344

Query: 271 SVIRGHDGLEQLDASYCF------SELCADSLFWLKNLKCLKAIRLDGTQLSSAFFNVIS 330
           +V  G   L+ +  + C           A S   L++LK  +  R++   L     N   
Sbjct: 345 AVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNC-- 404

Query: 331 VHSKYLVELGLSKCNGVTDANIIQLI--TRCIGLKVLNLTCCHSITDVAISSMASSCQKL 390
                L    L+ C G++D N    +    C  L+ L++ CC    D +++ +   C +L
Sbjct: 405 --GSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQL 464

Query: 391 MSLKLESCNMITERSLDRLGLYCSL-LEELDLTDCCGVNDKGLECLSKC--SQLLSLKLG 450
             ++L   N +T+  +  L    ++ L +++L++C  V+D  +  +S C    L SL L 
Sbjct: 465 QDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLD 524

Query: 451 LCTNITDTGLIKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLT--KLNLSYCNKVT 510
            C NIT+  L+ +A+NC  + +LD+   L + D G++AL++    L    L++  C+ +T
Sbjct: 525 GCKNITNASLVAVAKNCYSVNDLDISNTL-VSDHGIKALASSPNHLNLQVLSIGGCSSIT 584

Query: 511 DRGIECVGQL-EELCSLEIRGLQNVTS 519
           D+   C+ +L   L  L I+    ++S
Sbjct: 585 DKSKACIQKLGRTLLGLNIQRCGRISS 606

[Close]

BLAST of CmaCh11G011910 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-35
Identity = 133/468 (28.42%), Postives = 212/468 (45.30%), Query Frame = 0


Query: 88  LGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAEL 147
           +G     L SL L   S ++  GL  +   C  LE ++++      D+   A++ +C  L
Sbjct: 172 IGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNL 231

Query: 148 KEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGV-ELLCKKSFDLRVLDLSY 207
            E+ L+ C  + D GL  I   C +L+ +S+K C  V D G+  LL   +  L  L L  
Sbjct: 232 TELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQM 291

Query: 208 LKVTNESLRAVASLP-KLEVLIMVGCLSVDDVGLQYLEH--GCPSLKELDISRCDGITPY 267
           L VT+ SL  V      +  L++ G   V + G   + +  G   L  L I+ C G+T  
Sbjct: 292 LNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDM 351

Query: 268 GLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAIRLDGTQLSSAFFNVISVHS 327
           GL SV +G                         N+K  KAI      LS       +  S
Sbjct: 352 GLESVGKG-----------------------CPNMK--KAIISKSPLLSDNGLVSFAKAS 411

Query: 328 KYLVELGLSKCNGVTDANIIQLITRC-IGLKVLNLTCCHSITDVAISSMASS-CQKLMSL 387
             L  L L +C+ VT       +  C   LK  +L  C SI D+     ASS C  L SL
Sbjct: 412 LSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSL 471

Query: 388 KLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNIT 447
            + +C    + +L  +G  C  LE++DL    G+ + G   L + S L+ +    C+N+T
Sbjct: 472 SIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ-SSLVKINFSGCSNLT 531

Query: 448 DTGLIKI-ARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKLNLSYCNKVTDRGIECV 507
           D  +  I ARN   +  L++  C  I DA L +++  C+ L+ L++S C  ++D GI+ +
Sbjct: 532 DRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKC-AISDSGIQAL 591

Query: 508 GQLE--ELCSLEIRGLQNVTSVGLTAVAFGCKRLVDLDMKQCQNVDDS 546
              +  +L  L + G   VT   L A+      L+ L+++QC+++ +S
Sbjct: 592 ASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNS 612

[Close]

BLAST of CmaCh11G011910 vs. ExPASy Swiss-Prot
Match: Q8BH16 (F-box/LRR-repeat protein 2 OS=Mus musculus OX=10090 GN=Fbxl2 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-34
Identity = 108/374 (28.88%), Postives = 174/374 (46.52%), Query Frame = 0


Query: 134 DREAAAVSNCAE-----LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGV 193
           D E   V N ++     L+++ L  C+GV D  L      C  +E L+L  C +++D   
Sbjct: 63  DVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTC 122

Query: 194 ELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQYLEHGCPSL 253
             L +    L+ LDL+                         C+SV +  L+ +  GC +L
Sbjct: 123 YSLSRFCSKLKHLDLT------------------------SCVSVTNSSLKGISEGCRNL 182

Query: 254 KELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAIRLDG- 313
           + L++S CD IT  G+ +++RG  G                          LKA+ L G 
Sbjct: 183 EYLNLSWCDQITKEGIEALVRGCRG--------------------------LKALLLRGC 242

Query: 314 TQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDVAI 373
           TQL       I  H   LV L L  C+ +TD  ++Q+   C  L+ L L+ C ++TD ++
Sbjct: 243 TQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASL 302

Query: 374 SSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLS-KCS 433
           +++  +C +L  L+   C+ +T+     L   C  LE++DL +C  + D  L  LS  C 
Sbjct: 303 TALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCP 362

Query: 434 QLLSLKLGLCTNITDTGLIKIARNC---KRIYELDLYRCLGIGDAGLEALSTGCKRLTKL 493
           +L +L L  C  ITD G++ ++ +    +R+  L+L  CL + DA LE L   C+ L +L
Sbjct: 363 KLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLE-NCRGLERL 385

Query: 494 NLSYCNKVTDRGIE 498
            L  C +VT  GI+
Sbjct: 423 ELYDCQQVTRAGIK 385

[Close]

BLAST of CmaCh11G011910 vs. TAIR 10
Match: AT5G27920.1 (F-box family protein )

HSP 1 Score: 693.3 bits (1788), Expect = 1.8e-199
Identity = 343/643 (53.34%), Postives = 468/643 (72.78%), Query Frame = 0


Query: 1   MPTPFPLLLNFPHEILIRLRQYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60
           M T   +L     ++L+R+ + L D    ++WRL+ KDF RVD ++RTT+R+ R+EFL +
Sbjct: 1   MSTSPSILSVLSEDLLVRVYECL-DPPCRKTWRLISKDFLRVDSLTRTTIRILRVEFLPT 60

Query: 61  SIAKFEAIDELDLSICPRINDGTV---SIFLGIGFSRLRSLILSRSSGLSYMGLERVMRA 120
            + K+  +  LDLS+CP+++D  V   ++   I    ++SL LSRS+ +   GLE + R 
Sbjct: 61  LLFKYPNLSSLDLSVCPKLDDDVVLRLALDGAISTLGIKSLNLSRSTAVRARGLETLARM 120

Query: 121 CTGLEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSL 180
           C  LE VD+S+ WGFGDREAAA+S+   L+E+++DKCL ++DVGLARIVVGC  L ++SL
Sbjct: 121 CHALERVDVSHCWGFGDREAAALSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISL 180

Query: 181 KWCLQVSDLGVELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVG 240
           KWC+++SDLG++LLCK    L+ LD+SYLK+TN+S+R++A L KLEVL MV C  +DD G
Sbjct: 181 KWCMEISDLGIDLLCKICKGLKSLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGG 240

Query: 241 LQYLEHGCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNL 300
           LQ+LE+G PSL+E+D++RCD ++  GL S++RGH  ++ L AS+C SE+    L ++K L
Sbjct: 241 LQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGL 300

Query: 301 KCLKAIRLDGTQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLT 360
           K LK I +DG  +S +    +S   + L+E+GLS+C  VTD  +I L   C+ LK LNL 
Sbjct: 301 KHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLA 360

Query: 361 CCHSITDVAISSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDK 420
           CC  +TDVAIS++A SC+ L +LKLESC++ITE+ L  LG Y  L++ELDLTDC GVND+
Sbjct: 361 CCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDR 420

Query: 421 GLECLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYRCLGIGDAGLEALSTGC 480
           GLE +SKCS L  LKLGLCTNI+D G+  I   C ++ ELDLYRC G GD GL ALS GC
Sbjct: 421 GLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGC 480

Query: 481 KRLTKLNLSYCNKVTDRGIECVGQLEELCSLEIRGLQNVTSVGLTAVAFGCKRLVDLDMK 540
           K L +L LSYC ++TD G+E + QLE L  LE+RGL+N+T VGL A+A GCK+L  LD+K
Sbjct: 481 KSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVK 540

Query: 541 QCQNVDDSGFWALGSYARNLRQLNVGCCGVSDVGLCMMMGNLSCLQDAKLVTLNKVSVRG 600
            C+N+DDSGFWAL  +++NLRQ+N+  C VSD  LCM+M NLS +QD  LV L++V+V G
Sbjct: 541 LCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLSRVTVEG 600

Query: 601 FELALRACCLRVKKVKLHASLRFMLSSEILEILNAWGCKIRWD 641
           FE ALRACC R+KK+KL A LRF+LSSE+LE L+A GC+IRWD
Sbjct: 601 FEFALRACCNRLKKLKLLAPLRFLLSSELLETLHARGCRIRWD 642

[Close]

BLAST of CmaCh11G011910 vs. TAIR 10
Match: AT5G01720.1 (RNI-like superfamily protein )

HSP 1 Score: 469.2 bits (1206), Expect = 5.4e-132
Identity = 253/636 (39.78%), Postives = 377/636 (59.28%), Query Frame = 0


Query: 4   PFPLLLNFPHEILIRLRQYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSSIA 63
           PF LL      + I L     + SD +S+ L CK FY+++   R +L+  R ++L   + 
Sbjct: 12  PFDLLSE--ELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILT 71

Query: 64  KFEAIDELDLSICPRINDGTVSIFLGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEM 123
           ++    +LDL+ CPR+ D  +S+   +    LRSL LSRS   S  GL R+   C  L  
Sbjct: 72  RYRNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVE 131

Query: 124 VDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQV 183
           +D+S +    D +AA V+    L+ ++L +C  +TD+G+  I VGC +L  +SLKWC+ V
Sbjct: 132 IDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGV 191

Query: 184 SDLGVELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQYLEH 243
            DLGV LL  K  D+R LDLSYL +T + L  +  L  LE L++ GC  VDD  L+ L H
Sbjct: 192 GDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRH 251

Query: 244 GCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAI 303
            C SLK+LD S C  +T  GLTS++ G   L++LD S+C S +  D    LK +  L++I
Sbjct: 252 DCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSI 311

Query: 304 RLDGTQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSIT 363
           RLDG  ++      I      L E+ LSKC  VTD  +  L+ +   L+ L++TCC  ++
Sbjct: 312 RLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLS 371

Query: 364 DVAISSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLS 423
            V+I+ +A+SC  L+SLK+ESC++++  +   +G  C LLEELDLTD   ++D+GL+ +S
Sbjct: 372 RVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTD-NEIDDEGLKSIS 431

Query: 424 KCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKL 483
            C  L SLKLG+C NITD GL  I   C  + ELDLYR +GI D G+  ++ GC  L  +
Sbjct: 432 SCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETI 491

Query: 484 NLSYCNKVTDRGIECVGQLEELCSLEIRGLQNVTSVGLTAVAFGCKRLVDLDMKQCQNVD 543
           N+SYC  +TD+ +  + +   L + E RG  N+TS GL A+A  CKRL  +D+K+C +++
Sbjct: 492 NISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSIN 551

Query: 544 DSGFWALGSYARNLRQLNVGCCGVSDVGLCMMMGNLSCLQDAKLVTLNKVSVRGFELALR 603
           D+G  AL  +++NL+Q+NV    V++VGL + + N+ CLQ+  +V  + +   G   AL 
Sbjct: 552 DAGLLALAHFSQNLKQINVSDTAVTEVGL-LSLANIGCLQNIAVVNSSGLRPSGVAAALL 611

Query: 604 ACCLRVKKVKLHASLRFMLSSEILEILNAWGCKIRW 640
            C   ++K KLHASLR +L   ++  L A GC   W
Sbjct: 612 GCG-GLRKAKLHASLRSLLPLSLIHHLEARGCAFLW 642

[Close]

BLAST of CmaCh11G011910 vs. TAIR 10
Match: AT4G15475.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-46
Identity = 132/450 (29.33%), Postives = 214/450 (47.56%), Query Frame = 0


Query: 88  LGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSN-CAEL 147
           L  GF R+ +L L     +S +GL  + + CT L+ +D+   +  GD+  AAV   C +L
Sbjct: 135 LANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAVGKFCKQL 194

Query: 148 KEVRLDKCLGVTDVGLARIVVGCGR-LERLSLKWCLQVSDLGVELLCKKSFDLRVLDLSY 207
           +E+ L  C G+TDVG+  +VVGC + L+ + +    +++DL +E +      L VL L  
Sbjct: 195 EELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDS 254

Query: 208 LKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQYLEHGCPSLKELDISRCDGITPYGLT 267
             + ++ L AVA        + + C+SV DV    +   C SL+ L +      T  G+ 
Sbjct: 255 EYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMR 314

Query: 268 SVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAIRLDGT-QLSSAFFNVISVHSKY 327
           ++ +G   L+ L  S C+   C          K L+ + ++G   + +     I      
Sbjct: 315 AIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPR 374

Query: 328 LVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDVAISSMASSCQKLMSLKLES 387
           L EL L  C  + ++ + ++   C  L++L+L  C  I D+A+ S+A  C+ L  L +  
Sbjct: 375 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 434

Query: 388 CNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGL 447
           C  I  + +  +G +C  L EL L  C  V +K L  + K   L  L +  C  I+D G+
Sbjct: 435 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGI 494

Query: 448 IKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKLNLSYCNKVTDRGIECVGQ--- 507
             IAR C ++  LD+     IGD  L  L  GC  L  L LS+C+ +TD G+  + Q   
Sbjct: 495 TAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCK 554

Query: 508 LEELCSLEIRGLQNVTSVGLTAVAFGCKRL 532
           L E C +       +TS G+  V   C  +
Sbjct: 555 LLETCHMVY--CPGITSAGVATVVSSCPHI 581

[Close]

BLAST of CmaCh11G011910 vs. TAIR 10
Match: AT5G25350.1 (EIN3-binding F box protein 2 )

HSP 1 Score: 151.8 bits (382), Expect = 1.9e-36
Identity = 120/447 (26.85%), Postives = 210/447 (46.98%), Query Frame = 0


Query: 91  GFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAELKEV 150
           G   LR + L     +S +GL  + R+C  +E +D+S   G  D    A++ NC  L ++
Sbjct: 165 GCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDL 224

Query: 151 RLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVE-LLCKKSFDLRVLDLSYLKV 210
            +D C GV + GL  I   C  L  +S++ C ++ D GV  LL +    L  + L  L V
Sbjct: 225 TIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNV 284

Query: 211 TNESLRAVASL-PKLEVLIMVGCLSVDDVGLQYLEH--GCPSLKELDISRCDGITPYGLT 270
           +  SL  +      +  L++ G   V++ G   + +  G   LK L +  C G+T  GL 
Sbjct: 285 SGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLE 344

Query: 271 SVIRGHDGLEQLDASYCF------SELCADSLFWLKNLKCLKAIRLDGTQLSSAFFNVIS 330
           +V  G   L+ +  + C           A S   L++LK  +  R++   L     N   
Sbjct: 345 AVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNC-- 404

Query: 331 VHSKYLVELGLSKCNGVTDANIIQLI--TRCIGLKVLNLTCCHSITDVAISSMASSCQKL 390
                L    L+ C G++D N    +    C  L+ L++ CC    D +++ +   C +L
Sbjct: 405 --GSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQL 464

Query: 391 MSLKLESCNMITERSLDRLGLYCSL-LEELDLTDCCGVNDKGLECLSKC--SQLLSLKLG 450
             ++L   N +T+  +  L    ++ L +++L++C  V+D  +  +S C    L SL L 
Sbjct: 465 QDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLD 524

Query: 451 LCTNITDTGLIKIARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLT--KLNLSYCNKVT 510
            C NIT+  L+ +A+NC  + +LD+   L + D G++AL++    L    L++  C+ +T
Sbjct: 525 GCKNITNASLVAVAKNCYSVNDLDISNTL-VSDHGIKALASSPNHLNLQVLSIGGCSSIT 584

Query: 511 DRGIECVGQL-EELCSLEIRGLQNVTS 519
           D+   C+ +L   L  L I+    ++S
Sbjct: 585 DKSKACIQKLGRTLLGLNIQRCGRISS 606

[Close]

BLAST of CmaCh11G011910 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 150.6 bits (379), Expect = 4.3e-36
Identity = 133/468 (28.42%), Postives = 212/468 (45.30%), Query Frame = 0


Query: 88  LGIGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAEL 147
           +G     L SL L   S ++  GL  +   C  LE ++++      D+   A++ +C  L
Sbjct: 172 IGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNL 231

Query: 148 KEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGV-ELLCKKSFDLRVLDLSY 207
            E+ L+ C  + D GL  I   C +L+ +S+K C  V D G+  LL   +  L  L L  
Sbjct: 232 TELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQM 291

Query: 208 LKVTNESLRAVASLP-KLEVLIMVGCLSVDDVGLQYLEH--GCPSLKELDISRCDGITPY 267
           L VT+ SL  V      +  L++ G   V + G   + +  G   L  L I+ C G+T  
Sbjct: 292 LNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDM 351

Query: 268 GLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCLKAIRLDGTQLSSAFFNVISVHS 327
           GL SV +G                         N+K  KAI      LS       +  S
Sbjct: 352 GLESVGKG-----------------------CPNMK--KAIISKSPLLSDNGLVSFAKAS 411

Query: 328 KYLVELGLSKCNGVTDANIIQLITRC-IGLKVLNLTCCHSITDVAISSMASS-CQKLMSL 387
             L  L L +C+ VT       +  C   LK  +L  C SI D+     ASS C  L SL
Sbjct: 412 LSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSL 471

Query: 388 KLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNIT 447
            + +C    + +L  +G  C  LE++DL    G+ + G   L + S L+ +    C+N+T
Sbjct: 472 SIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ-SSLVKINFSGCSNLT 531

Query: 448 DTGLIKI-ARNCKRIYELDLYRCLGIGDAGLEALSTGCKRLTKLNLSYCNKVTDRGIECV 507
           D  +  I ARN   +  L++  C  I DA L +++  C+ L+ L++S C  ++D GI+ +
Sbjct: 532 DRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKC-AISDSGIQAL 591

Query: 508 GQLE--ELCSLEIRGLQNVTSVGLTAVAFGCKRLVDLDMKQCQNVDDS 546
              +  +L  L + G   VT   L A+      L+ L+++QC+++ +S
Sbjct: 592 ASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNS 612

The following BLAST results are available for this feature:

BLAST of CmaCh11G011910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWU5	7.7e-131	39.78	F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana OX=3702 GN=FBL3 PE=2 SV=1	[more]
Q9C5D2	1.7e-45	29.33	F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1	[more]
Q708Y0	2.7e-35	26.85	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1	[more]
Q9SKK0	6.0e-35	28.42	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
Q8BH16	2.3e-34	28.88	F-box/LRR-repeat protein 2 OS=Mus musculus OX=10090 GN=Fbxl2 PE=1 SV=1	[more]

BLAST of CmaCh11G011910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27920.1	1.8e-199	53.34	F-box family protein	[more]
AT5G01720.1	5.4e-132	39.78	RNI-like superfamily protein	[more]
AT4G15475.1	1.2e-46	29.33	F-box/RNI-like superfamily protein	[more]
AT5G25350.1	1.9e-36	26.85	EIN3-binding F box protein 2	[more]
AT2G25490.1	4.3e-36	28.42	EIN3-binding F box protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 451..476 e-value: 0.17 score: 21.0 coord: 348..373 e-value: 0.013 score: 24.7 coord: 400..425 e-value: 3.8 score: 16.5 coord: 322..347 e-value: 20.0 score: 12.2 coord: 169..194 e-value: 0.014 score: 24.6 coord: 554..578 e-value: 42.0 score: 9.7 coord: 195..219 e-value: 65.0 score: 8.2 coord: 477..502 e-value: 2.1E-5 score: 34.0 coord: 245..270 e-value: 1.1E-4 score: 31.6 coord: 92..117 e-value: 450.0 score: 1.6 coord: 143..168 e-value: 0.69 score: 19.0 coord: 374..399 e-value: 6.2 score: 15.8 coord: 426..450 e-value: 3.8 score: 16.5 coord: 220..244 e-value: 300.0 score: 3.1 coord: 528..553 e-value: 0.0097 score: 25.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 398..629 e-value: 3.7E-40 score: 139.7
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 46..194 e-value: 1.4E-9 score: 39.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 195..287 e-value: 1.4E-18 score: 68.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 288..397 e-value: 7.0E-15 score: 56.8
None	No IPR available	GENE3D	1.20.1280.50		coord: 7..45 e-value: 4.9E-6 score: 27.9
None	No IPR available	PANTHER	PTHR13318:SF91	F-BOX/LRR-REPEAT PROTEIN 3	coord: 13..598
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 13..598
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 37..312
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 197..584
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 555..572 e-value: 0.32 score: 11.2 coord: 400..423 e-value: 0.0028 score: 17.6 coord: 350..371 e-value: 0.3 score: 11.3 coord: 245..265 e-value: 0.2 score: 11.8 coord: 477..498 e-value: 0.016 score: 15.2 coord: 424..448 e-value: 0.22 score: 11.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G011910.1	CmaCh11G011910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding