CmaCh11G011520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G011520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RuvB-like helicase
Location	Cma_Chr11: 6649065 .. 6656901 (+)
RNA-Seq Expression	CmaCh11G011520
Synteny	CmaCh11G011520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCCTTAAACGTCAGCCATTTCTCGCTCCCATTACTACTGCACCCGGCCCCGCCGTGTCGCCGCATGCTGCACTCTCAGCCGTCGCCGTCTCAGTCCCCCTTCCAACTCGACGCCGCTCCCTGCCTCTCACACTCTCTCAAAATCAGGTAATCTCCTGTGTCTGGATGGATATCTTTTTTCTTTTTTTACTGTATTCCTACAATCCTTATATTGCGTTTGTTTTTTGCTTGTTAAGGTTGGAAACTTAGGCAACACGAAATATTGGTTTGGGATTAAGGGGCGAGTTTGGAATGATTTTGAAGAGTGTGGTTTTAAGTGAAAGAAGCACGAATTGAGTACTATTCCTTCGAGCACTTTAAGCACATTTTAGTGTTTTTAGGATTTTCAAGTGATCACACTGTAAATTGTGGAGAGTGTTTTTAATTGACTAATAGTCCAAATACGTTTTCCCCCATTTTTAGATGTTAAATTTTTGCAGCTATTAGTATAATTTCGGAAATATGTATATGATCTGTGGCTGTGGTATCTATTTAGTCCGTATATTATCTTTTGCAGCTCAAATTTACTTGTATACATTATAATTGATTGGCTACGAATACCCCTAAAGTTCGTACTTTGTTTAAAAATACCCAGAACTTTCAAAAGGTCCAATAATACCCTTAAACTTTCAATAAAAGTTAAAAAATACAAAAAAAAAAAAAAAAACCCTTACCATTAGTTTCAGATGGAAACTGTTAATATTTTGTTTGAAAAATATCCTTTAAGCTTTCATAGGTTTAAAAAAAGACAATGGGAATTTTTATTAATGTAACTTAATTGATTTGCATGATGGTAATATATTGGTAAGTTTTGGTAACTTAGATTTAATTTTTGTGTGTAGAGTACATTAATCATATATATAATTAATGTTTGATTCTTCGCACGTTGACATGCATTAGACGTTTGTAGTAGCAGATTTGGGTTACGTAAGTGAAAGATATGAATAGAAAGAAAAAATTGAAACCAAGAGGATTATTGGCCTAACTTACAGTCAAGCTACATTCTACTCTTCCAACCATTCACAACTATCTTTACCATTTTTTCTTGTCTAATAAACATAGTAATCTTGGATAATCAAGTATTTTCATTCTCAGGCATCTCGGATTTTGAGCATCAGATATTCCTTTTAAGCTAAGATGGACAAGATGAAGATAGAAGAGGTTCAATCAACCTCTAAGAAGCAACGGGTAGCCACTCACACTCACATTAAAGGACTTGGTCTTGAGGTATCTCGCTCTTAACTTTACATTGAATAGGAAATAATCATTGTTATTTGGTTTTAAAATTACTTTTAAACGAATCGAAAATTATTATTTTTTCCCTCCATGTTTTGGCTTGTGTGTGATATACTACATTTACTTTCTGTGAAATTTTATATGAAATTTCCTCTCTCATTTAATCAATTATGTAAAAACTGAAATTTTATATGAAATTTTCTTTCTCGTGTTGTCTTTTATGTAGAAACTTCCTTTGGTCATTTCCTTCTTTTGTTTTAGTCTCTTTGGGAGCTTTAGAGCTTTGTTATTGCACCCCTTCTCTTTGCTTCAAATCTATCTTCTTTTGAGACCCTTTGGTAGAGAAGGTGCAAAAGTGACTTGCTAATTGGAAGAGAAGGGTTTTTATCTGAGGGGTAGACTAACTCTCACTCGTTCAATGTTAAGGGACATCCTTACTTATTTACTTTCCCTCTTCAGAGCTCCTCGTTTAGGGGACGAGGGAAGGAGTGCACATTTTTTGATCGAGGAAATCAATGAATCTTGGGAGGCTAGAACCGGGAATTTTAGGACACGCCATTGAGCCTTGTTGGCTAAATGGCTATGGTGGTTTCCCTTGAGTCTTAACACCTTTTGGCATAGAATAATTGTGAGTAATTATGGTCCTAATTCTTTTGAGTGGTTGTTGGGTAGGGTCAATGGCACGTACATAAATCCTTGGAAAGACATCTCCAATGAGCTCCCTACCTTTTCTATTCTGGTCCAGCACTTGATGGGGGATGGGAAGGAAATGTACTTCTGGGAGGATAAATGGGTGGAGGATATACCCCTTTGCGTTATGTTTCCTCTTTTATACCATTTGTCTTCTATGAAAAATCATTTTGTTGCTAACATTCTAGATCCTTCTAGGAGCTCTCCTTGTTTAGCTTTTGTCGTCTTTTATCTAATAAGGAAACGATGAACATCATGACTCTCTTTACTTTCATATCTTTGATTAGGAGTTTTCTTTGACTAGGGCAATTTTTGTTTTTTCTTGTAATTCATTCGTTTAGTGCTTATTGAATCCCTCCCTAGTCGGTGAGTCGTTTTTTTCTCAAAGAAGGTACAATTCTTTGTTTGACTGGTAATCCACGAAAGAGATAACACTTTAGAGATCGGCTTTTGAAAAAGTTGTCTAATTTGATTGGGCCGTTTTGTTCCATTCTTTGTCGGAAGGTGGAGGAAGGCCTTGATCATATTCTTTGGAGCTATAATTTTGTTTGGATTGCTTGAAATTCCTTTTTTGGATGCTTGATTAATTTCCTTCATAAAAAAGAAAAAGGAATTTCATGGGGTAGAAAGGTTCTGAGTTTACAATTCTGATTTTTTAGCCAGGGCCTTTATGTATCTCTCAGTAGTCTTTACTCAGAACCATATTTGTGTTAAAAGAATTATAGTTTTACTTACATCTATACATTTTTCTTTTTTATTAACTTTTCTTTTATTTAGCAAACATGGAATGAATTTTTATAATAATATGCACAGGAACATATCATATTATGATCATTGTCTGTTTATCTTTCCTGCTAAAAAGTAAAAAAGAAATATTTGTCCACTTAGTAAAAAAAGTGACATCCATAGGTATCCATTTTAGGCATCAGGAAAGGCATTGCCACTAGCTTCAGGTTTTGTGGGTCAATCAGAAGCAAGAGAAGCAGCAGGGTTAGTTATTGATATGATACGACAGAAGAAAATGGCTGGCCGAGCACTTCTTCTAGCTGGACCTCCTGGTACTGGAAAGACTGCGCTTGCACTTGGAATATCACAGGAGCTAGGAAGCAAGGTCCTTCTGATTCCCCTCCTCACCACACTCCTAGAAAGACCCCAAGAATTATTTTTTTGTTGGCCTTGGCTTAGAAAATCTGCTTACTTTATTATCATGGACAGGTTCCCTTTTGTCCAATGGTTGGGTCTGAAGTATACTCATCCGAAGTGAAGAAAACCGAGGTTTTGATGGAAAATTTCAGACGATCTATTGGTCTACGTATCAAGGAGAAGAAAGAGGTCTATGAGGGAGAGGTAAGTGCCTAGTGCCTCAAGCATATGAATCTTTAAATGTTGTTGTTGTCAACTATTATAAACACTTGATGTGAGGTATCCTTTTTCCCAGGTGACTGAACTTTCACCAGAAGAAACAGAGAGCATGACTGGTGGCTATGGTAAAAGCATAAGCCATGTTATCATTGGTTTAAAAACTATTAAAGGAACAAAGCAATTAAAATTGGATCCGACCATCTATGATGCCTTAATTAAAGAGAAGGTGACATTTGCTAATTATATCGTTTCGGGGGGCGTATGGATGTTTTTACTAAGTAATGGAAGTGCTGTACCTTTTTACCAATGACCATTCTGGTTATAATGAAGCATCTTTATGCAAAGTAATCTTCAGGTAGCTGTTGGTGATGTTATATATATAGAAGCAAATAGTGGAGCTGTGAAAAGGGTGGGTAGAAGTGATGCTTTTGCTACAGAGTTTGATCTTGAAGCTGAAGAATATGTTCCACTTCCTAAAGGTGAAGTTCACAAGAGGAAAGAAATAGTCCAGGTGAGAAATTTAACTTTACTGTATTGCATTTCCTCAATATCGTAATATTTACAGTCGTAAATCTTTAGTTTGCTAGCTTGCTTAAGAGAAAAACTACATAAAGTATGTGTTTTCTTTGATATAATTCTGGCATTCTTGTTTCAAGTTTATATAATTATTTTTATCATATTTATGAACACTATTAAGTTGTAGGATGCACGTTTAATGTACACGTAGGATATCGGTATTTTTCTTTAATCAAATCTTTGTCCGGTATTGGTTGACTGGAAACTGCTTCCTGTTGTTTATTTATTTTGTTATGATTTTGCAAAAGTCTTAATTGTTCTTTTTTTTTTTTTTTGGGGTATATATCCACCTTAATTTACTATGCTATTGCCAGGAGCTTTGCACTAGCATTCTTTGCTCCATTAAGAACTCTGGCCTAGCATGTTTCACACCAGTGATGGAATATGCATGTTACATCCCAATCTCACCGCTAATAGATATGGTCCTCTTTAGGCTTTCCCTTTTGAGCTTCCCCTAAAGGTTTTCAAAACGTGTCTGCTAGGGAGAGATTTTAATACCTTTATATAGAATGCTTCGTTCTCTTTCCCAACTGATGTGGGATCTCATAATCCACCCCCTTCGGTGCCCAGCGTCCTCGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGTACCTTCCAATCCACCCCCCCTTCGGGGCCTAGGGTCGTTGCTGGCACACTGACTCGTGTCCACTCTCTTTCGGGACTCAGCCTCCTTGCAAGCACATCGTCCGATGTCTGGCTCTAATACCATTTGTAACAACCCAAGTCCACCGCTAGCAAATATTGTCTTCTTTGGGCTTTCCTTTGGGGCTTCCCTCAAGGTTTTTAAAACGCGTTTGTTAGGGAGAGGTTTCCACATCCTTATAAAGAATGCTTCATTCTTCTCCCCAATTGATGTGGGATCTCACAATGCATTCATGTGTATGCGTGTTTTTAATAGCAAAATCAAGTTTTTGAATCTTTCTTGCTTAACATTCTTAAATTTGGAGATATGTAGACTATTAATTTGTTAAGATTCTGGTAACAATTATAAGTATACACTATATTGCAATGTCGAGAAAAAAAATTTACAATTGCAATAACCGTTTGAGAGGGCTATGTCCAAAGTCCCACACGGAAAAATACTCAAAATCATTTCCCCTTCTAAGTTCCATAACTCCCGTACCAAGTCACCCTTAACCATTTACACTATGCCCTAAGTAATATCTTACTAATATTCCCAACATATCCCTTACTAATACTCTCACAAAGACCCAAAATCATTCCCCCCTTCTACGACCCCCAACTCCCTTATCTAAAACCAAGTCACCTTAACTAATTACCACTATGCCCTTATCAATATCCTACTAATAATCTCAACATATGGCATACTATTGCTCTCTCATAATTTTGTATTAATTTTATTGCATTTTCCTTTTCTACCTGACAGGATGTGACTCTACATGATCTAGATGCTGCCAATGCTCGGCCTCAAGGTGGACAAGATATACTATCTCTAATGGGTCAGATGATGAAGCCAAGGAAGACGGAAATCACAGACAAGTTGCGGCAAGAAGTAAATAAGGTAGCTCTTTGTGTTTGAAAGATCTTTTTTTTTTTTTTGAGTTACGTTCTTGGTGATATCCTGAATCGTGGACTGTATTATTATACTTTGAATGGGACATGAGTTCTTAATTTCTTTGATTTATTTTTATATTCTCGACGAGAAAATACTTCCAGTACTGTTCCAAAGTTTCATGAGATTTTTCAATAACACTGGAGGGTTTATTCTATTTTCAGTAGTATGAAATTTTTAAACACAAGATATAGAAGTATAATTCTTGGTAGAGTTTATTTTACCGACAGGTGGTTAACCGATATATTGACGAAGGTATAGCAGAACTTGTCCCGGGAGTTCTATTCGTTGATGAGGTTATTTCTTCTCTTTAAGCTCTCTCGACATTCTCTGTACTCAAACTTATGAGGTAAGTAAAGTTTCCAGGTGCATATGCTGGATATGGAGTGCTTTTCGTACTTAAATCGAGCTTTAGAGAGCTCACTCTCCCCAATAGTGATCTTTGCTACAAACAGAGGAATCTGCAATGTACGGTATGAGTCTTTGCCCTTAGTTGATCCTGTATTTCAAGTTGCACATTCTTGCACCTTTTGCATGCTTGAGATGTATTTTTTAGAAAAAACGAGCTTCCATTGAGAAAAAAAAAAAAAAAATGAAAGAATACAATGACATCGTTAAAATCAAGCCCACGAAAGTAACCCGATTAAAGAAAAGGGTTCCAATCCAGTAATATGAGACCAAACATATAATTACAAGACCAATTACATGCCTTTGTTGCTTGAATGTTTTATTCTGCTGACTTGCCCTTTCATTTGGCAAGAAATCCATATTTTATAGGCACCTTTACTTATGTTTCGAACCATATGTTGTCGGTTTTTATGCCTCCTGGATGTAATTTGTTATGACAAGTCTTCTCCAAAAAGAAGAGATTATTGTATCGATTACAAGTGAATCATTTATGAAGGGGATGAGCATTGTGATGATGGATGGAGCTCACAAAGGAGACCTTTGATTAACTTTATGGAAACTTCTGAAGGTAGACCAATGTTTCTAGAAGAAATGGGTTGAAGTCGATCATGAAAATGTGATTGAAGTGATAACAGTTAATTTTCTTAATTGCGAAGGTGCAACGCTAATTATCGAAATACAACTTTCGACGATTGTATAGACACCACGTGTAGTGCATGCCCTGAATCTTGCCTCGGAGAAGAACATATTTGCTACTAAGAATGTTGAAAACAATCAACTTTTATATGGGGTGTAGATTTATTATTCTTATGTGAAATTTACATATTCTAAAAAAAGCCTATCCCCAATGTGTCCGTTTTCTAATTTTTGTAGAAATCGACGTATCACCTTGTCTGGTCATGTACGCATTCATGTTTTGTCTCCATATTCATGCTTCTTAGACTACATCTTTTGGACCGTAAAATAAACGTTATTTTTTCAGAGGGACTGATATGAATAGCCCTCATGGAATACCTGTTGACTTGTTAGACCGATTGGTGATCATCCGAACACAAACGTATGGCCCTGCTGAGATGATTCAGGTCGACTTGCATTCTTTTGTGGAAATTTAAATCTTAATACTTTTTGTGAAGGTGCCAAACTGCTGATTATGCTATCATTGTTACTTTGTCAAGATATTAGCCATTCGGGCACAGGTGGAAGAATTGGTTGTAGATGAAGAAAGTTTAGCTTTCCTTGGGGAGATTGGCCAGAGAACATCTTTAAGGTACCATAATGATAGATTTGTGTTTGGAGTGTTTTTTAAATAAGTAATTTTCATATACAATTGGTCGATGCTATCAATAACCTCTGGTCGATAATACATGCTAGTTATTGTTGAACGTTCATGAACTTACTTGGCTGAAGTGTTTTGGTTGTTATGTAGACACGCGGTTCAGTTGCTATCGCCTGCTAGCGTCGTGGCGAAAATGAATGGTCGTGAAAGCATATGCAAGGTATTTACTTGAATGTGGCATTTTATTGGAGATTCATTTGTAGGCTCTATGTTTTGATTGTTTCTCACTCACAGGGAGATCTCAAAGAAGTTTGTGCGCTCTATCTGGACGCCAAGTCTTCGGCAAGGCTTCTTCAAGAACAGCAAGAAAGGTACATTTCTTGATTTGTTTCGATGTGGGATTCCACTTTTAACCATTTCCCACCTATACATTGATTTTTATCTCAGAAACATTCTGTTGTGTAGATGCTTTCTCTCTCTCTCAAAATTGATGTGTACAAACATGAATCTATCACCTGAAATGAAAAAATGGGTTTGTGTTTTGGCTATCATAAGTTTGCAATTTCATTTCGTAACTCTATTAACCAACCAAAGACAGGAGATGTAGGTACTATGATCGATGTATTTGGTTATTAGAAACTGAATGGTGA

mRNA sequence

TTTTCCTTAAACGTCAGCCATTTCTCGCTCCCATTACTACTGCACCCGGCCCCGCCGTGTCGCCGCATGCTGCACTCTCAGCCGTCGCCGTCTCAGTCCCCCTTCCAACTCGACGCCGCTCCCTGCCTCTCACACTCTCTCAAAATCAGGCATCTCGGATTTTGAGCATCAGATATTCCTTTTAAGCTAAGATGGACAAGATGAAGATAGAAGAGGTTCAATCAACCTCTAAGAAGCAACGGGTAGCCACTCACACTCACATTAAAGGACTTGGTCTTGAGGCATCAGGAAAGGCATTGCCACTAGCTTCAGGTTTTGTGGGTCAATCAGAAGCAAGAGAAGCAGCAGGGTTAGTTATTGATATGATACGACAGAAGAAAATGGCTGGCCGAGCACTTCTTCTAGCTGGACCTCCTGGTACTGGAAAGACTGCGCTTGCACTTGGAATATCACAGGAGCTAGGAAGCAAGGTTCCCTTTTGTCCAATGGTTGGGTCTGAAGTATACTCATCCGAAGTGAAGAAAACCGAGGTTTTGATGGAAAATTTCAGACGATCTATTGGTCTACGTATCAAGGAGAAGAAAGAGGTCTATGAGGGAGAGGTGACTGAACTTTCACCAGAAGAAACAGAGAGCATGACTGGTGGCTATGGTAAAAGCATAAGCCATGTTATCATTGGTTTAAAAACTATTAAAGGAACAAAGCAATTAAAATTGGATCCGACCATCTATGATGCCTTAATTAAAGAGAAGGTAGCTGTTGGTGATGTTATATATATAGAAGCAAATAGTGGAGCTGTGAAAAGGGTGGGTAGAAGTGATGCTTTTGCTACAGAGTTTGATCTTGAAGCTGAAGAATATGTTCCACTTCCTAAAGGTGAAGTTCACAAGAGGAAAGAAATAGTCCAGGATGTGACTCTACATGATCTAGATGCTGCCAATGCTCGGCCTCAAGGTGGACAAGATATACTATCTCTAATGGGTCAGATGATGAAGCCAAGGAAGACGGAAATCACAGACAAGTTGCGGCAAGAAGTAAATAAGGTGGTTAACCGATATATTGACGAAGGTATAGCAGAACTTGTCCCGGGAGTTCTATTCGTTGATGAGGTGCATATGCTGGATATGGAGTGCTTTTCGTACTTAAATCGAGCTTTAGAGAGCTCACTCTCCCCAATAGTGATCTTTGCTACAAACAGAGGAATCTGCAATGTACGAGGGACTGATATGAATAGCCCTCATGGAATACCTGTTGACTTGTTAGACCGATTGGTGATCATCCGAACACAAACGTATGGCCCTGCTGAGATGATTCAGATATTAGCCATTCGGGCACAGGTGGAAGAATTGGTTGTAGATGAAGAAAGTTTAGCTTTCCTTGGGGAGATTGGCCAGAGAACATCTTTAAGACACGCGGTTCAGTTGCTATCGCCTGCTAGCGTCGTGGCGAAAATGAATGGTCGTGAAAGCATATGCAAGGGAGATCTCAAAGAAGTTTGTGCGCTCTATCTGGACGCCAAGTCTTCGGCAAGGCTTCTTCAAGAACAGCAAGAAAGGTACATTTCTTGATTTGTTTCGATGTGGGATTCCACTTTTAACCATTTCCCACCTATACATTGATTTTTATCTCAGAAACATTCTGTTGTGTAGATGCTTTCTCTCTCTCTCAAAATTGATGTGTACAAACATGAATCTATCACCTGAAATGAAAAAATGGGTTTGTGTTTTGGCTATCATAAGTTTGCAATTTCATTTCGTAACTCTATTAACCAACCAAAGACAGGAGATGTAGGTACTATGATCGATGTATTTGGTTATTAGAAACTGAATGGTGA

Coding sequence (CDS)

ATGGACAAGATGAAGATAGAAGAGGTTCAATCAACCTCTAAGAAGCAACGGGTAGCCACTCACACTCACATTAAAGGACTTGGTCTTGAGGCATCAGGAAAGGCATTGCCACTAGCTTCAGGTTTTGTGGGTCAATCAGAAGCAAGAGAAGCAGCAGGGTTAGTTATTGATATGATACGACAGAAGAAAATGGCTGGCCGAGCACTTCTTCTAGCTGGACCTCCTGGTACTGGAAAGACTGCGCTTGCACTTGGAATATCACAGGAGCTAGGAAGCAAGGTTCCCTTTTGTCCAATGGTTGGGTCTGAAGTATACTCATCCGAAGTGAAGAAAACCGAGGTTTTGATGGAAAATTTCAGACGATCTATTGGTCTACGTATCAAGGAGAAGAAAGAGGTCTATGAGGGAGAGGTGACTGAACTTTCACCAGAAGAAACAGAGAGCATGACTGGTGGCTATGGTAAAAGCATAAGCCATGTTATCATTGGTTTAAAAACTATTAAAGGAACAAAGCAATTAAAATTGGATCCGACCATCTATGATGCCTTAATTAAAGAGAAGGTAGCTGTTGGTGATGTTATATATATAGAAGCAAATAGTGGAGCTGTGAAAAGGGTGGGTAGAAGTGATGCTTTTGCTACAGAGTTTGATCTTGAAGCTGAAGAATATGTTCCACTTCCTAAAGGTGAAGTTCACAAGAGGAAAGAAATAGTCCAGGATGTGACTCTACATGATCTAGATGCTGCCAATGCTCGGCCTCAAGGTGGACAAGATATACTATCTCTAATGGGTCAGATGATGAAGCCAAGGAAGACGGAAATCACAGACAAGTTGCGGCAAGAAGTAAATAAGGTGGTTAACCGATATATTGACGAAGGTATAGCAGAACTTGTCCCGGGAGTTCTATTCGTTGATGAGGTGCATATGCTGGATATGGAGTGCTTTTCGTACTTAAATCGAGCTTTAGAGAGCTCACTCTCCCCAATAGTGATCTTTGCTACAAACAGAGGAATCTGCAATGTACGAGGGACTGATATGAATAGCCCTCATGGAATACCTGTTGACTTGTTAGACCGATTGGTGATCATCCGAACACAAACGTATGGCCCTGCTGAGATGATTCAGATATTAGCCATTCGGGCACAGGTGGAAGAATTGGTTGTAGATGAAGAAAGTTTAGCTTTCCTTGGGGAGATTGGCCAGAGAACATCTTTAAGACACGCGGTTCAGTTGCTATCGCCTGCTAGCGTCGTGGCGAAAATGAATGGTCGTGAAAGCATATGCAAGGGAGATCTCAAAGAAGTTTGTGCGCTCTATCTGGACGCCAAGTCTTCGGCAAGGCTTCTTCAAGAACAGCAAGAAAGGTACATTTCTTGA

Protein sequence

MDKMKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRSIGLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPGVLFVDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRLVIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAKMNGRESICKGDLKEVCALYLDAKSSARLLQEQQERYIS

Homology

[Close]

BLAST of CmaCh11G011520 vs. ExPASy Swiss-Prot
Match: Q9FMR9 (RuvB-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RIN1 PE=1 SV=1)

HSP 1 Score: 801.6 bits (2069), Expect = 4.7e-231
Identity = 407/458 (88.86%), Postives = 439/458 (95.85%), Query Frame = 0


Query: 1   MDKMKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIR 60
           M+K+KIEE+QST+KKQR+ATHTHIKGLGLE +G  + LA+GFVGQ EAREAAGLV+DMI+
Sbjct: 1   MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
           QKKMAG+ALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
Sbjct: 61  QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120

Query: 121 RSIGLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIY 180
           R+IGLRIKE KEVYEGEVTELSPEETES+TGGYGKSISHV+I LKT+KGTK LKLDPTIY
Sbjct: 121 RAIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIY 180

Query: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQD 240
           DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHK+KEIVQD
Sbjct: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD 240

Query: 241 VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPG 300
           VTL DLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQE+NKVVNRYIDEG+AELVPG
Sbjct: 241 VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG 300

Query: 301 VLFVDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRL 360
           VLF+DEVHMLDMECFSYLNRALESSLSPIVIFATNRG+CNVRGTDM SPHG+P+DLLDRL
Sbjct: 301 VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL 360

Query: 361 VIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAK 420
           VIIRTQ Y P+EMIQI+AIRAQVEEL VDEE L  LGEIGQRTSLRHAVQLLSPAS+VAK
Sbjct: 361 VIIRTQIYDPSEMIQIIAIRAQVEELTVDEECLVLLGEIGQRTSLRHAVQLLSPASIVAK 420

Query: 421 MNGRESICKGDLKEVCALYLDAKSSARLLQEQQERYIS 459
           MNGR++ICK D++EV +LYLDAKSSA+LL EQQE+YIS
Sbjct: 421 MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS 458

[Close]

BLAST of CmaCh11G011520 vs. ExPASy Swiss-Prot
Match: Q9Y265 (RuvB-like 1 OS=Homo sapiens OX=9606 GN=RUVBL1 PE=1 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 4.7e-191
Identity = 334/455 (73.41%), Postives = 406/455 (89.23%), Query Frame = 0


Query: 4   MKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIRQKK 63
           MKIEEV+ST+K QR+A+H+H+KGLGL+ SG A   ASG VGQ  AREA G+++++I+ KK
Sbjct: 1   MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60

Query: 64  MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRSI 123
           MAGRA+LLAGPPGTGKTALAL I+QELGSKVPFCPMVGSEVYS+E+KKTEVLMENFRR+I
Sbjct: 61  MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120

Query: 124 GLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIYDAL 183
           GLRIKE KEVYEGEVTEL+P ETE+  GGYGK+ISHVIIGLKT KGTKQLKLDP+I+++L
Sbjct: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180

Query: 184 IKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQDVTL 243
            KE+V  GDVIYIEANSGAVKR GR D +ATEFDLEAEEYVPLPKG+VHK+KEI+QDVTL
Sbjct: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240

Query: 244 HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPGVLF 303
           HDLD ANARPQGGQDILS+MGQ+MKP+KTEITDKLR E+NKVVN+YID+GIAELVPGVLF
Sbjct: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 300

Query: 304 VDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGT-DMNSPHGIPVDLLDRLVI 363
           VDEVHMLD+ECF+YL+RALESS++PIVIFA+NRG C +RGT D+ SPHGIP+DLLDR++I
Sbjct: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360

Query: 364 IRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAKMN 423
           IRT  Y P EM QI+ IRAQ E + + EE+L  LGEIG +T+LR++VQLL+PA+++AK+N
Sbjct: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420

Query: 424 GRESICKGDLKEVCALYLDAKSSARLLQEQQERYI 458
           G++SI K  ++E+  L+ DAKSSA++L +QQ++Y+
Sbjct: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455

[Close]

BLAST of CmaCh11G011520 vs. ExPASy Swiss-Prot
Match: P60122 (RuvB-like 1 OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 6.2e-191
Identity = 333/455 (73.19%), Postives = 406/455 (89.23%), Query Frame = 0


Query: 4   MKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIRQKK 63
           MKIEEV+ST+K QR+A+H+H+KGLGL+ SG A   ASG VGQ  AREA G+++++I+ KK
Sbjct: 1   MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60

Query: 64  MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRSI 123
           MAGRA+LLAGPPGTGKTALAL I+QELGSKVPFCPMVGSEVYS+E+KKTEVLMENFRR+I
Sbjct: 61  MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120

Query: 124 GLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIYDAL 183
           GLRIKE KEVYEGEVTEL+P ETE+  GGYGK+ISHVIIGLKT KGTKQLKLDP+I+++L
Sbjct: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180

Query: 184 IKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQDVTL 243
            KE+V  GDVIYIEANSGAVKR GR D +ATEFDLEAEEYVPLPKG+VHK+KEI+QDVTL
Sbjct: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240

Query: 244 HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPGVLF 303
           HDLD ANARPQGGQDILS+MGQ+MKP+KTEITDKLR E+NKVVN+YID+G+AELVPGVLF
Sbjct: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLF 300

Query: 304 VDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGT-DMNSPHGIPVDLLDRLVI 363
           VDEVHMLD+ECF+YL+RALESS++PIVIFA+NRG C +RGT D+ SPHGIP+DLLDR++I
Sbjct: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360

Query: 364 IRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAKMN 423
           IRT  Y P EM QI+ IRAQ E + + EE+L  LGEIG +T+LR++VQLL+PA+++AK+N
Sbjct: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420

Query: 424 GRESICKGDLKEVCALYLDAKSSARLLQEQQERYI 458
           G++SI K  ++E+  L+ DAKSSA++L +QQ++Y+
Sbjct: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455

[Close]

BLAST of CmaCh11G011520 vs. ExPASy Swiss-Prot
Match: P60123 (RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 6.2e-191
Identity = 333/455 (73.19%), Postives = 406/455 (89.23%), Query Frame = 0


Query: 4   MKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIRQKK 63
           MKIEEV+ST+K QR+A+H+H+KGLGL+ SG A   ASG VGQ  AREA G+++++I+ KK
Sbjct: 1   MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60

Query: 64  MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRSI 123
           MAGRA+LLAGPPGTGKTALAL I+QELGSKVPFCPMVGSEVYS+E+KKTEVLMENFRR+I
Sbjct: 61  MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120

Query: 124 GLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIYDAL 183
           GLRIKE KEVYEGEVTEL+P ETE+  GGYGK+ISHVIIGLKT KGTKQLKLDP+I+++L
Sbjct: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180

Query: 184 IKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQDVTL 243
            KE+V  GDVIYIEANSGAVKR GR D +ATEFDLEAEEYVPLPKG+VHK+KEI+QDVTL
Sbjct: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240

Query: 244 HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPGVLF 303
           HDLD ANARPQGGQDILS+MGQ+MKP+KTEITDKLR E+NKVVN+YID+G+AELVPGVLF
Sbjct: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLF 300

Query: 304 VDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGT-DMNSPHGIPVDLLDRLVI 363
           VDEVHMLD+ECF+YL+RALESS++PIVIFA+NRG C +RGT D+ SPHGIP+DLLDR++I
Sbjct: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360

Query: 364 IRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAKMN 423
           IRT  Y P EM QI+ IRAQ E + + EE+L  LGEIG +T+LR++VQLL+PA+++AK+N
Sbjct: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420

Query: 424 GRESICKGDLKEVCALYLDAKSSARLLQEQQERYI 458
           G++SI K  ++E+  L+ DAKSSA++L +QQ++Y+
Sbjct: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455

[Close]

BLAST of CmaCh11G011520 vs. ExPASy Swiss-Prot
Match: Q9DE26 (RuvB-like 1 OS=Xenopus laevis OX=8355 GN=ruvbl1 PE=2 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 6.2e-191
Identity = 333/455 (73.19%), Postives = 408/455 (89.67%), Query Frame = 0


Query: 4   MKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIRQKK 63
           MKIEEV+ST+K QR+ATH+H+KGLGL+ +G A   A+G VGQ  AREA G+++++I+ KK
Sbjct: 1   MKIEEVKSTTKTQRIATHSHVKGLGLDENGIAKQAAAGLVGQENAREACGVIVELIKSKK 60

Query: 64  MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRSI 123
           MAGRA+LLAGPPGTGKTALAL I+QELG+KVPFCPMVGSEVYS+E+KKTEVLMENFRR+I
Sbjct: 61  MAGRAVLLAGPPGTGKTALALAIAQELGNKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120

Query: 124 GLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIYDAL 183
           GLRI+E KEVYEGEVTEL+P ETE+  GGYGK+ISHVIIGLKT KGTKQLKLDP+IY++L
Sbjct: 121 GLRIRETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIYESL 180

Query: 184 IKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQDVTL 243
            KE+V VGDVIYIEANSGAVKR GRSD +ATEFDLEAEEYVPLPKG+VH++KE++QDVTL
Sbjct: 181 QKERVEVGDVIYIEANSGAVKRQGRSDTYATEFDLEAEEYVPLPKGDVHQKKEVIQDVTL 240

Query: 244 HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPGVLF 303
           HDLD ANARPQGGQDILS+MGQ+MKP+KTEITDKLR ++NKVVN+YID+GIAELVPGVLF
Sbjct: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGQINKVVNKYIDQGIAELVPGVLF 300

Query: 304 VDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGT-DMNSPHGIPVDLLDRLVI 363
           +DEVHMLD+ECF+YL+RALESSL+PIVIFATNRG C +RGT D+ SPHGIP+DLLDR++I
Sbjct: 301 IDEVHMLDIECFTYLHRALESSLAPIVIFATNRGNCIIRGTEDVASPHGIPLDLLDRVMI 360

Query: 364 IRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAKMN 423
           IRT  Y P EM QI+ IRAQ E + + EE+L  LGEIG +T+LR++VQLL+PA+++AK+N
Sbjct: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420

Query: 424 GRESICKGDLKEVCALYLDAKSSARLLQEQQERYI 458
           G++SI K  ++E+  L+ DAKSSA++L EQQE+++
Sbjct: 421 GKDSIEKEHVEEINELFYDAKSSAKILAEQQEKFM 455

[Close]

BLAST of CmaCh11G011520 vs. TAIR 10
Match: AT5G22330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 801.6 bits (2069), Expect = 3.3e-232
Identity = 407/458 (88.86%), Postives = 439/458 (95.85%), Query Frame = 0


Query: 1   MDKMKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIR 60
           M+K+KIEE+QST+KKQR+ATHTHIKGLGLE +G  + LA+GFVGQ EAREAAGLV+DMI+
Sbjct: 1   MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
           QKKMAG+ALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
Sbjct: 61  QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120

Query: 121 RSIGLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIY 180
           R+IGLRIKE KEVYEGEVTELSPEETES+TGGYGKSISHV+I LKT+KGTK LKLDPTIY
Sbjct: 121 RAIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIY 180

Query: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQD 240
           DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHK+KEIVQD
Sbjct: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD 240

Query: 241 VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPG 300
           VTL DLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQE+NKVVNRYIDEG+AELVPG
Sbjct: 241 VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG 300

Query: 301 VLFVDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRL 360
           VLF+DEVHMLDMECFSYLNRALESSLSPIVIFATNRG+CNVRGTDM SPHG+P+DLLDRL
Sbjct: 301 VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL 360

Query: 361 VIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAK 420
           VIIRTQ Y P+EMIQI+AIRAQVEEL VDEE L  LGEIGQRTSLRHAVQLLSPAS+VAK
Sbjct: 361 VIIRTQIYDPSEMIQIIAIRAQVEELTVDEECLVLLGEIGQRTSLRHAVQLLSPASIVAK 420

Query: 421 MNGRESICKGDLKEVCALYLDAKSSARLLQEQQERYIS 459
           MNGR++ICK D++EV +LYLDAKSSA+LL EQQE+YIS
Sbjct: 421 MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS 458

[Close]

BLAST of CmaCh11G011520 vs. TAIR 10
Match: AT5G67630.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 359.8 bits (922), Expect = 3.3e-99
Identity = 202/466 (43.35%), Postives = 312/466 (66.95%), Query Frame = 0


Query: 1   MDKMKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIR 60
           M ++K+ E +  ++ +R+  H+HI+GLGL+++ +   ++ G VGQ +AR+AAG+++ MIR
Sbjct: 1   MAELKLSESRDLTRVERIGAHSHIRGLGLDSALEPRAVSEGMVGQVKARKAAGVILQMIR 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
           + K+AGRA+L+AG PGTGKTA+A+G+++ LG + PF  + GSE++S E+ KTE L ++FR
Sbjct: 61  EGKIAGRAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALTQSFR 120

Query: 121 RSIGLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIY 180
           ++IG+RIKE+ EV EGEV E+  +   S +G   KS      G  T+K T       T+Y
Sbjct: 121 KAIGVRIKEETEVIEGEVVEVQIDRPAS-SGVASKS------GKMTMKTTDM----ETVY 180

Query: 181 D-------ALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEV 240
           D       AL KEKV  GDVI I+  +G + ++GRS + + ++D    +  +V  P+GE+
Sbjct: 181 DMGAKMIEALNKEKVQSGDVIAIDKATGKITKLGRSFSRSRDYDAMGAQTKFVQCPEGEL 240

Query: 241 HKRKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYID 300
            KRKE+V  VTLH++D  N+R QG    L+L          EI  ++R++++  V  + +
Sbjct: 241 QKRKEVVHCVTLHEIDVINSRTQG---FLAL----FTGDTGEIRSEVREQIDTKVAEWRE 300

Query: 301 EGIAELVPGVLFVDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHG 360
           EG AE+VPGVLF+DEVHMLD+ECFS+LNRALE+ +SPI++ ATNRG+  +RGT+  SPHG
Sbjct: 301 EGKAEIVPGVLFIDEVHMLDIECFSFLNRALENEMSPILVVATNRGVTTIRGTNQKSPHG 360

Query: 361 IPVDLLDRLVIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQL 420
           IP+DLLDRL+II TQ Y   ++ +IL IR Q E++ ++EE+   L  IG+ TSLR+A+ L
Sbjct: 361 IPIDLLDRLLIITTQPYTDDDIRKILEIRCQEEDVEMNEEAKQLLTLIGRDTSLRYAIHL 420

Query: 421 LSPASVVAKMNGRESICKGDLKEVCALYLDAKSSARLLQEQQERYI 458
           ++ A++  +    + +   D++ V  L+LD + S + L E Q +Y+
Sbjct: 421 ITAAALSCQKRKGKVVEVEDIQRVYRLFLDVRRSMQYLVEYQSQYM 448

[Close]

BLAST of CmaCh11G011520 vs. TAIR 10
Match: AT3G49830.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 343.2 bits (879), Expect = 3.2e-94
Identity = 191/459 (41.61%), Postives = 295/459 (64.27%), Query Frame = 0


Query: 1   MDKMKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAAGLVIDMIR 60
           M ++++ E +  ++ +R+  H+HI+GLGL++  +   ++ G VGQ +AR+AAG+ +++IR
Sbjct: 1   MAELRLSETRDLTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIR 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
             K++GRA+L+AG PGTGK A+A+GI++ LG + PF  + GSE++S E+ KTE L + FR
Sbjct: 61  DGKISGRAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFR 120

Query: 121 RSIGLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIY 180
           ++IG+RIKE+ +V EGEV  +S +   S  G   K+     I +KT        L   + 
Sbjct: 121 KAIGVRIKEETDVIEGEVVTISIDRPASSGGSVKKTGK---ITMKTTDMESNFDLGWKLI 180

Query: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDL--EAEEYVPLPKGEVHKRKEIV 240
           + L KEKV  GDVI ++   G + ++GRS   + +FD+     ++V  P+GE+ KRKE++
Sbjct: 181 EPLDKEKVQSGDVIVLDRFCGKITKLGRSFTRSRDFDVMGSKTKFVQCPEGELEKRKEVL 240

Query: 241 QDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELV 300
             VTLH++D  N+R QG    L+L          EI  + R++ +  V  + +EG AE+V
Sbjct: 241 HSVTLHEIDVINSRTQG---YLAL----FTGDTGEIRSETREQSDTKVAEWREEGKAEIV 300

Query: 301 PGVLFVDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLD 360
           PGVLF+DEVHMLD+ECFS+LNRALE+ +SPI++ ATNRG+  +RGT+  S HGIP+D LD
Sbjct: 301 PGVLFIDEVHMLDIECFSFLNRALENDMSPILVVATNRGMTTIRGTNQISAHGIPIDFLD 360

Query: 361 RLVIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVV 420
           RL+II TQ Y   E+  IL IR Q E++ ++EE+   L  IG  TSLR+A+ L++ A++ 
Sbjct: 361 RLLIITTQPYTQDEIRNILEIRCQEEDVEMNEEAKQLLTLIGCNTSLRYAIHLINAAALA 420

Query: 421 AKMNGRESICKGDLKEVCALYLDAKSSARLLQEQQERYI 458
                 + +   D++ V  L+LD K S + L E +  Y+
Sbjct: 421 CLKRKGKVVEIQDIERVYRLFLDTKRSMQYLVEHESEYL 449

The following BLAST results are available for this feature:

BLAST of CmaCh11G011520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMR9	4.7e-231	88.86	RuvB-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RIN1 PE=1 SV=1	[more]
Q9Y265	4.7e-191	73.41	RuvB-like 1 OS=Homo sapiens OX=9606 GN=RUVBL1 PE=1 SV=1	[more]
P60122	6.2e-191	73.19	RuvB-like 1 OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1	[more]
P60123	6.2e-191	73.19	RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1	[more]
Q9DE26	6.2e-191	73.19	RuvB-like 1 OS=Xenopus laevis OX=8355 GN=ruvbl1 PE=2 SV=1	[more]

BLAST of CmaCh11G011520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22330.1	3.3e-232	88.86	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G67630.1	3.3e-99	43.35	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G49830.1	3.2e-94	41.61	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 449..458
None	No IPR available	GENE3D	1.10.8.60		coord: 368..458 e-value: 7.8E-30 score: 104.8
None	No IPR available	PANTHER	PTHR11093:SF7	RUVB-LIKE HELICASE	coord: 3..458
None	No IPR available	CDD	cd00009	AAA	coord: 43..133 e-value: 5.20256E-7 score: 47.1407
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 65..367 e-value: 6.8E-9 score: 45.6
IPR010339	TIP49, P-loop domain	PFAM	PF06068	TIP49	coord: 17..368 e-value: 4.2E-169 score: 562.3
IPR041048	RuvB-like, AAA-lid domain	PFAM	PF17856	TIP49_C	coord: 376..441 e-value: 1.9E-17 score: 63.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 14..365 e-value: 4.2E-174 score: 580.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 40..439
IPR042487	RuvBL1/2, DNA/RNA binding domain	GENE3D	2.40.50.360		coord: 122..247 e-value: 4.2E-174 score: 580.3
IPR027238	RuvB-like	PANTHER	PTHR11093	RUVB-RELATED REPTIN AND PONTIN	coord: 3..458

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G011520.1	CmaCh11G011520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0016573	histone acetylation
biological_process	GO:0048507	meristem development
biological_process	GO:1900150	regulation of defense response to fungus
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0031011	Ino80 complex
cellular_component	GO:0035267	NuA4 histone acetyltransferase complex
cellular_component	GO:0097255	R2TP complex
cellular_component	GO:0000812	Swr1 complex
molecular_function	GO:0043139	5'-3' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003678	DNA helicase activity