CmaCh11G011330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G011330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein indeterminate-domain 7-like isoform X2
Location	Cma_Chr11: 6455312 .. 6458996 (+)
RNA-Seq Expression	CmaCh11G011330
Synteny	CmaCh11G011330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTTCCTGTCCACCAGAATGAAGGCCAAAATCATGCCCTTGTTCTTCCTCCTCTAGAAATTGATATCATTTGTAGGGTTTTGGTGAGTGTTTGTTCTGTGTTTTTCAATGTCCAAAACCTCAGGGTGCTCCGATGATGGTGGGAGCTTGAGCTTAGAGAATCAACTCAGCCATGGAAGCTCTCAACCCCATCAACAGCCACAGCTTTCAGTTCCCAAGAAGAAAAGGAACTTACCAGGAACACCAGGTCCCTTTCTTTCTTTCTTTCTCTTCAAACTCGTTCGATCCCTCGTGATTTTATTTTTAGTTTTCGGGATAAGTTCTGTTGATCCAAAAATATTTGAGCTAAGTTGAGAGATCTTGTTTGCAGACAAGTTCATAATTGAGTGATGGCTTTTTTTTTTTTTTTTTTTATATTTGAAATTTGAATATTTTAAATAAATATTAAATGAACTTTAAATTAAACCTCTATTTTTATTTGGGTTTTTTTTTTTTTTTTTATATTTGAAATTTGAATATTTTAAATAAATATTAAATGAACTTTAAATTAAACCTCTATTTTTATTTGGGTTTTTTTTTTTTTTTTTATATTTGAAATTTGAATATTTTAAATAAATATTAAATGAACTTTAAATTAAACCTCTATTTTTATTTGGGTTTTTTTTTTTTTTTTTATATTTGAAATTTGAATATTTTAAATAAATATTAAATGAACTTTAAATTAAACCTCTATTTTTATTTGGGTTTTTTTTTTTTTTTTAAATAATTGTTTTAGATAGAGAAATTTAAATATTTGGGTAGTTGGAAGGACATCAATTATTGGAGGGGATTACAATGATTGGTATGTACTGTTTGGTTTTCTTGAATTATTAAAATATCCGAAACAATTGTTTTTTTTTTTTTTTTTTCTTAAATCAATGTAATTAAGAATTACATTCTTAATTTATACAAATCATAAACAAGGAAATTTTTAATATATATTAAGACATAAATAATCATTCTAAATATGAAAATTAAAGAATACAAAAATAATATTNGAATTCATATTAACGACAATAAAAACTTATTTAGACATGGACATTTTAATTAATATTAAAATTTTAATTAAGAAGAGTGTTCGTAGATTGGATTGGTCGGATTAAGACATTTTTTTAGAGTAAATACAATTGTTCGAGTGGTAGGTTTTTTCAATTTAAACAACACTTACCAAACCCAAATTCAACTATATTTTCTTAGTTAAATTGAATCCGGTAATTTATTTAAATATTTTTATTATAATAAAAGAAAATTAAATCAATTTATTTTATTTTAAATATTTAATTAAAATTTTTAACTTAATTTCAATATCTATTTTATTATAATTAATTTTAAAAGTTCCGATACATAATTATATGTTTATTTTGTTAAACAATATCTAATTTTTGGAAAATCTATAAATTCATTATTTAAACTCAACTCAATCTAAATAAATTCATAATTCAATCAAAATTTGGATTAGATTGGGTTGATATGATTTTGGAAGCTATCTTAGATACAGACCCAGATGCGGAAGTGGTAGCGTTATCGCCCGGAACGTTAATGGCAACGAATCGGTTTGTGTGTGAAATATGCAACAAGGGATTTCAAAGAGACCAGAACTTGCAGCTACACAGGCGAGGCCACAACCTGCCATGGAAGCTGAAGCAACGGACGAGCGGGAGCGACACGAGGAGGAGGCGGGTGTACGTATGTCCAGAAACGTCGTGTGTCCACCACAATCCAGCGAGAGCGCTCGGAGACCTCACCGGAATCAAGAAGCACTTCAGCAGAAAACATGGGGAGAAGAATTGGAAGTGCGAGAAATGCTCTAAAAAATATGCAGTTCATTCGGACTTGAAAGCTCATCTCAAAACTTGTGGCTCCAAGGAATACAAATGTGACTGTGGCACTGTCTTTTCCAGGTTAATATCTAAAACTTTGTACTTCAATCACGACCCTCTACAATGTATAATATTGTCTACTTTGAGCATAAGTTCATGGCTTTACTTGGGCTTCCCAAAATTGCTCAGACGAATGGAGATGTATTCCTTACTTATAAACCCTTCACACCATAGAACATCCCCTGAAGCCTATATAACACTGAAATAGTCTCCCGTAATCGAGTTTTGACTCTTTTATCTGGAGCCCTCGAACAAAATACACTTTTTGTTTGACAAGTAAGTCACTTTTGACTACACCTTCGAGCCTCATAACTTTTTTGTTCGACATTTGAGGATTTTATTGACACCATCCACAATGGTATGATATTGTCCACTTTAAGCATACGCTCTCACATCTTTGCTCTGGGCTTCAAAAAATGTCTCGTATGAATGAAGATATATTCCTTACTTATAAACCCACCTCAAAAATCCTCCCCTCGAACAAAATATCATAGAGCATCCCTTGAGGTCTATGTAACCTTCAAATATTCTCCCCTTAATTGAGGCTCTACTCCTTTATCTAGAGCACTCGAACAAAGTACACAATTTGTTCGACACTTGAGTCACTTTTGAGTACATCTTCGAGACTCACAACTTCTTTGTTCGACATTTGAGAATTTTATTGACATGATTAAGTTAAGGGCATGACTCTGGTATCATTTGAATCAAGACTCTCCACAATGATATGATATTGTCCACTTTGAATATAAGCTCTCATGTTTTGTTTTGGGCTTCCCGAAAACCTCAGACCAATAGAGATATATTTCTTACTTATAAATCATGTTCATTCCTAAATTATAGAAAGTTGGACTCCATCCCAACAATTCTTTAACACATTTTTTTTTTTTTAAATAACCTTAAAATTTTGAAAATTATGAATAATCCTTGTTCAATATTTGGCAGGAGAGATAGCTTCATAACCCACAGAGAATATTGCGATGCCTTAACAGAAGAAAGCAACAAACTAGCTGGTCGAGGAGCAACAATGGCTGCCTCGCCGCCCATAACGCTGCCCCACCACGACCTCATGCCTATCCCTCCAAAGCCCTTTAACCTTTCAGCCGGATCCATGTTTTCATCCTCCATTTCCAACGACCACCACTTTCCCTCTTCCTCCTCCGCCGCCCTCATGTCCGCCACTGCCTTGCTGCAGAAGGCGGCGCAGATGGGAGCTGCCGTCAGTTCGCCCATTATCCAACAAAAGGTGTTGCACATTGATTTAATCATTTTGATGGGTTCATTACTGTAGATTTAATCATTGATTTGTGTCCTTAACAGAACGGTTTGGTTACAACAATGGCTCCTTCTTCATTTGGTGGGATGTTGCCCACCACCTGTTTGCAGAAATGCCCACAAGAAAACATTGGCGGAGGTGTGGACATGGGGATGATTGATGACATTCTGATGCTCAATGGGATGTTCGACAAACCGATCGGGGAGGGCGCGAGGAAGACGATGACGTTGGATTTGTTGGGGGCTGAGGGAGGGAAGGGGAGGAAGTTTCAGGCGGAAGAAAGTGTAGGGTTTGGAGGGGTTATGGAGAATGTGGGTTACTTTTGCCACCAAGGGGCCATGGGAAAGCAAGGCCATATGTGACTTAGATAGTTTATGTGGTTCTTGGTAGAAAAATTTAAGAAACAAATTGATCACAATTATGAATATAGATTTATATGCTGATAACAAGAGTAATTGAAATATGGAAGAATACTAAGAATAAGAACATAAC

mRNA sequence

AAGCTTCCTGTCCACCAGAATGAAGGCCAAAATCATGCCCTTGTTCTTCCTCCTCTAGAAATTGATATCATTTGTAGGGTTTTGGTGAGTGTTTGTTCTGTGTTTTTCAATGTCCAAAACCTCAGGGTGCTCCGATGATGGTGGGAGCTTGAGCTTAGAGAATCAACTCAGCCATGGAAGCTCTCAACCCCATCAACAGCCACAGCTTTCAGTTCCCAAGAAGAAAAGGAACTTACCAGGAACACCAGACCCAGATGCGGAAGTGGTAGCGTTATCGCCCGGAACGTTAATGGCAACGAATCGGTTTGTGTGTGAAATATGCAACAAGGGATTTCAAAGAGACCAGAACTTGCAGCTACACAGGCGAGGCCACAACCTGCCATGGAAGCTGAAGCAACGGACGAGCGGGAGCGACACGAGGAGGAGGCGGGTGTACGTATGTCCAGAAACGTCGTGTGTCCACCACAATCCAGCGAGAGCGCTCGGAGACCTCACCGGAATCAAGAAGCACTTCAGCAGAAAACATGGGGAGAAGAATTGGAAGTGCGAGAAATGCTCTAAAAAATATGCAGTTCATTCGGACTTGAAAGCTCATCTCAAAACTTGTGGCTCCAAGGAATACAAATGTGACTGTGGCACTGTCTTTTCCAGGAGAGATAGCTTCATAACCCACAGAGAATATTGCGATGCCTTAACAGAAGAAAGCAACAAACTAGCTGGTCGAGGAGCAACAATGGCTGCCTCGCCGCCCATAACGCTGCCCCACCACGACCTCATGCCTATCCCTCCAAAGCCCTTTAACCTTTCAGCCGGATCCATGTTTTCATCCTCCATTTCCAACGACCACCACTTTCCCTCTTCCTCCTCCGCCGCCCTCATGTCCGCCACTGCCTTGCTGCAGAAGGCGGCGCAGATGGGAGCTGCCGTCAGTTCGCCCATTATCCAACAAAAGAACGGTTTGGTTACAACAATGGCTCCTTCTTCATTTGGTGGGATGTTGCCCACCACCTGTTTGCAGAAATGCCCACAAGAAAACATTGGCGGAGGTGTGGACATGGGGATGATTGATGACATTCTGATGCTCAATGGGATGTTCGACAAACCGATCGGGGAGGGCGCGAGGAAGACGATGACGTTGGATTTGTTGGGGGCTGAGGGAGGGAAGGGGAGGAAGTTTCAGGCGGAAGAAAGTGTAGGGTTTGGAGGGGTTATGGAGAATGTGGGTTACTTTTGCCACCAAGGGGCCATGGGAAAGCAAGGCCATATGTGACTTAGATAGTTTATGTGGTTCTTGGTAGAAAAATTTAAGAAACAAATTGATCACAATTATGAATATAGATTTATATGCTGATAACAAGAGTAATTGAAATATGGAAGAATACTAAGAATAAGAACATAAC

Coding sequence (CDS)

ATGTCCAAAACCTCAGGGTGCTCCGATGATGGTGGGAGCTTGAGCTTAGAGAATCAACTCAGCCATGGAAGCTCTCAACCCCATCAACAGCCACAGCTTTCAGTTCCCAAGAAGAAAAGGAACTTACCAGGAACACCAGACCCAGATGCGGAAGTGGTAGCGTTATCGCCCGGAACGTTAATGGCAACGAATCGGTTTGTGTGTGAAATATGCAACAAGGGATTTCAAAGAGACCAGAACTTGCAGCTACACAGGCGAGGCCACAACCTGCCATGGAAGCTGAAGCAACGGACGAGCGGGAGCGACACGAGGAGGAGGCGGGTGTACGTATGTCCAGAAACGTCGTGTGTCCACCACAATCCAGCGAGAGCGCTCGGAGACCTCACCGGAATCAAGAAGCACTTCAGCAGAAAACATGGGGAGAAGAATTGGAAGTGCGAGAAATGCTCTAAAAAATATGCAGTTCATTCGGACTTGAAAGCTCATCTCAAAACTTGTGGCTCCAAGGAATACAAATGTGACTGTGGCACTGTCTTTTCCAGGAGAGATAGCTTCATAACCCACAGAGAATATTGCGATGCCTTAACAGAAGAAAGCAACAAACTAGCTGGTCGAGGAGCAACAATGGCTGCCTCGCCGCCCATAACGCTGCCCCACCACGACCTCATGCCTATCCCTCCAAAGCCCTTTAACCTTTCAGCCGGATCCATGTTTTCATCCTCCATTTCCAACGACCACCACTTTCCCTCTTCCTCCTCCGCCGCCCTCATGTCCGCCACTGCCTTGCTGCAGAAGGCGGCGCAGATGGGAGCTGCCGTCAGTTCGCCCATTATCCAACAAAAGAACGGTTTGGTTACAACAATGGCTCCTTCTTCATTTGGTGGGATGTTGCCCACCACCTGTTTGCAGAAATGCCCACAAGAAAACATTGGCGGAGGTGTGGACATGGGGATGATTGATGACATTCTGATGCTCAATGGGATGTTCGACAAACCGATCGGGGAGGGCGCGAGGAAGACGATGACGTTGGATTTGTTGGGGGCTGAGGGAGGGAAGGGGAGGAAGTTTCAGGCGGAAGAAAGTGTAGGGTTTGGAGGGGTTATGGAGAATGTGGGTTACTTTTGCCACCAAGGGGCCATGGGAAAGCAAGGCCATATGTGA

Protein sequence

MSKTSGCSDDGGSLSLENQLSHGSSQPHQQPQLSVPKKKRNLPGTPDPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRRRVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTCGSKEYKCDCGTVFSRRDSFITHREYCDALTEESNKLAGRGATMAASPPITLPHHDLMPIPPKPFNLSAGSMFSSSISNDHHFPSSSSAALMSATALLQKAAQMGAAVSSPIIQQKNGLVTTMAPSSFGGMLPTTCLQKCPQENIGGGVDMGMIDDILMLNGMFDKPIGEGARKTMTLDLLGAEGGKGRKFQAEESVGFGGVMENVGYFCHQGAMGKQGHM

Homology

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BLAST of CmaCh11G011330 vs. ExPASy Swiss-Prot
Match: Q8H1F5 (Protein indeterminate-domain 7 OS=Arabidopsis thaliana OX=3702 GN=IDD7 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 3.4e-81
Identity = 181/349 (51.86%), Postives = 214/349 (61.32%), Query Frame = 0


Query: 1   MSKTSGCSDDGGSLSLEN--QLSHGSSQPHQQPQLSVP----KKKRNLPGTPDPDAEVVA 60
           MS  +  S D  S+S  N  + S  +   H Q Q  VP    K+KRN PG PDP+AEV+A
Sbjct: 21  MSNLTSASGDQASVSSGNRTETSGSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEAEVMA 80

Query: 61  LSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRRRVYVCPET 120
           LSP TLMATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKLKQR S  D  R++VYVCPE 
Sbjct: 81  LSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQR-SNKDVVRKKVYVCPEP 140

Query: 121 SCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTCGSKEYKCD 180
            CVHH+P+RALGDLTGIKKHF RKHGEK WKCEKCSKKYAV SD KAH KTCG+KEYKCD
Sbjct: 141 GCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCD 200

Query: 181 CGTVFSRRDSFITHREYCDALTEESNKLAGRGATMAASPPITLPHHD------------- 240
           CGT+FSRRDSFITHR +CDAL EES +       + AS      HH              
Sbjct: 201 CGTLFSRRDSFITHRAFCDALAEESARAMPNPIMIQASNSPHHHHHQTQQNIGFSSSSQN 260

Query: 241 --------------------------LMPIPPKPFNLSAGSMF----SSSISNDHHFPSS 300
                                     L+   P P N + G++F    SS  +    FP  
Sbjct: 261 IISNSNLHGPMKQEESQHHYQNIPPWLISSNPNP-NGNNGNLFPPVASSVNTGRSSFPHP 320

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BLAST of CmaCh11G011330 vs. ExPASy Swiss-Prot
Match: O22759 (Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV=2)

HSP 1 Score: 300.4 bits (768), Expect = 2.8e-80
Identity = 152/243 (62.55%), Postives = 183/243 (75.31%), Query Frame = 0


Query: 36  PKKKRNLPGTPDPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 95
           PKKKR LPG PDPDAEV+ALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 52  PKKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 111

Query: 96  QRTSGSDTRRRRVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAV 155
           Q+ +  + ++++VYVCPET+C HH+P+RALGDLTGIKKHF RKHGEK WKCEKCSK YAV
Sbjct: 112 QKNT-KEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAV 171

Query: 156 HSDLKAHLKTCGSKEYKCDCGTVFSRRDSFITHREYCDALTEESNKLAGRGATMAASPPI 215
            SD KAH K CG+++Y+CDCGT+FSR+D+FITHR +CDAL EES +L    ++   +P  
Sbjct: 172 QSDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHSTSSSNLTNPNP 231

Query: 216 TLPHHDLMPIPPKPFNLSAGSMFSSSISNDHHFPSSSSAAL-------MSATALLQKAAQ 272
               H  M      FN S+  +F+SS       PS S+AAL       +SATALLQKA  
Sbjct: 232 NFQGHHFM------FNKSSSLLFTSSPLFIE--PSLSTAALSTPPTAALSATALLQKATS 285

[Close]

BLAST of CmaCh11G011330 vs. ExPASy Swiss-Prot
Match: Q9LRW7 (Protein indeterminate-domain 11 OS=Arabidopsis thaliana OX=3702 GN=IDD11 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.7e-78
Identity = 184/395 (46.58%), Postives = 215/395 (54.43%), Query Frame = 0


Query: 1   MSKTSGCSDDGGSLSLENQLS---------HGSSQPHQQPQLSVP-----KKKRNLPGTP 60
           MS  +  S D  S+S  N            H   Q  QQ QL VP     KK+RN PG P
Sbjct: 20  MSNLTSASGDQASVSSGNITEASGSNYFPHHQQQQEQQQQQLVVPDSQTQKKRRNQPGNP 79

Query: 61  DPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRR 120
           DP++EV+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR S  +  R+
Sbjct: 80  DPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR-SNKEVIRK 139

Query: 121 RVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTC 180
           +VYVCPE SCVHH+P+RALGDLTGIKKHF RKHGEK WKC+KCSKKYAV SD KAH KTC
Sbjct: 140 KVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTC 199

Query: 181 GSKEYKCDCGTVFSRRDSFITHREYCDALTEES--------NKLAGRGATMAASPPITLP 240
           G+KEY+CDCGT+FSRRDSFITHR +C+AL EE+        N+   +   +      + P
Sbjct: 200 GTKEYRCDCGTLFSRRDSFITHRAFCEALAEETAREVVIPQNQNNNQPNPLLIHQSASHP 259

Query: 241 HHDLMPIPPKPFNLSAGSMFSSSISNDHHF------------------------------ 294
           HH     P    + S+ S  + +I N  HF                              
Sbjct: 260 HHHHQTQPTINVSSSSSSSHNHNIINSLHFDTNNGNTNNSNNSNNHLHTFPMKKEQQSND 319

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BLAST of CmaCh11G011330 vs. ExPASy Swiss-Prot
Match: Q9ZWA6 (Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.7e-78
Identity = 155/257 (60.31%), Postives = 182/257 (70.82%), Query Frame = 0


Query: 8   SDDGG---SLSLENQLSHGSSQPHQQPQLSVPKKKRNLPGTPDPDAEVVALSPGTLMATN 67
           S  GG   S S  + + H     H+     + KKKRNLPG PDP+AEV+ALSP TLMATN
Sbjct: 9   SSSGGYVQSSSTTDHVDHHHHDQHESLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATN 68

Query: 68  RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRRRVYVCPETSCVHHNPARA 127
           RF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQRT  S   R+RVYVCPE SCVHH+P RA
Sbjct: 69  RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRT--SKEVRKRVYVCPEKSCVHHHPTRA 128

Query: 128 LGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTCGSKEYKCDCGTVFSRRDS 187
           LGDLTGIKKHF RKHGEK WKCEKC+K+YAV SD KAH KTCG++EY+CDCGT+FSRRDS
Sbjct: 129 LGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDS 188

Query: 188 FITHREYCDALTEESNKL--AGRGATMAASPPITLPHHDLM------PIPPKPFNLSAGS 247
           FITHR +CDAL EE+ +L  A    + AA+    L +H LM      P  P+P +   G 
Sbjct: 189 FITHRAFCDALAEETARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSFPFGP 248

Query: 248 MFSSSISNDHHFPSSSS 254
                  + H FP +++
Sbjct: 249 P-QPQHHHHHQFPITTN 262

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BLAST of CmaCh11G011330 vs. ExPASy Swiss-Prot
Match: Q9LVQ7 (Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.5e-78
Identity = 137/168 (81.55%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 34  SVPKKKRNLPGTPDPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 93
           SV KKKRNLPG PDPDAEV+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK
Sbjct: 29  SVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 88

Query: 94  LKQRTSGSDTRRRRVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKY 153
           L+QR+  +   R++VYVCP + CVHH+P+RALGDLTGIKKHF RKHGEK WKCEKCSKKY
Sbjct: 89  LRQRS--TKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKY 148

Query: 154 AVHSDLKAHLKTCGSKEYKCDCGTVFSRRDSFITHREYCDALTEESNK 202
           AV SD KAH K CG+KEYKCDCGT+FSRRDSFITHR +CDAL EES K
Sbjct: 149 AVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAK 194

[Close]

BLAST of CmaCh11G011330 vs. TAIR 10
Match: AT1G55110.1 (indeterminate(ID)-domain 7 )

HSP 1 Score: 303.5 bits (776), Expect = 2.4e-82
Identity = 181/349 (51.86%), Postives = 214/349 (61.32%), Query Frame = 0


Query: 1   MSKTSGCSDDGGSLSLEN--QLSHGSSQPHQQPQLSVP----KKKRNLPGTPDPDAEVVA 60
           MS  +  S D  S+S  N  + S  +   H Q Q  VP    K+KRN PG PDP+AEV+A
Sbjct: 21  MSNLTSASGDQASVSSGNRTETSGSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEAEVMA 80

Query: 61  LSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRRRVYVCPET 120
           LSP TLMATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKLKQR S  D  R++VYVCPE 
Sbjct: 81  LSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQR-SNKDVVRKKVYVCPEP 140

Query: 121 SCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTCGSKEYKCD 180
            CVHH+P+RALGDLTGIKKHF RKHGEK WKCEKCSKKYAV SD KAH KTCG+KEYKCD
Sbjct: 141 GCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCD 200

Query: 181 CGTVFSRRDSFITHREYCDALTEESNKLAGRGATMAASPPITLPHHD------------- 240
           CGT+FSRRDSFITHR +CDAL EES +       + AS      HH              
Sbjct: 201 CGTLFSRRDSFITHRAFCDALAEESARAMPNPIMIQASNSPHHHHHQTQQNIGFSSSSQN 260

Query: 241 --------------------------LMPIPPKPFNLSAGSMF----SSSISNDHHFPSS 300
                                     L+   P P N + G++F    SS  +    FP  
Sbjct: 261 IISNSNLHGPMKQEESQHHYQNIPPWLISSNPNP-NGNNGNLFPPVASSVNTGRSSFPHP 320

[Close]

BLAST of CmaCh11G011330 vs. TAIR 10
Match: AT4G02670.1 (indeterminate(ID)-domain 12 )

HSP 1 Score: 300.4 bits (768), Expect = 2.0e-81
Identity = 152/243 (62.55%), Postives = 183/243 (75.31%), Query Frame = 0


Query: 36  PKKKRNLPGTPDPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 95
           PKKKR LPG PDPDAEV+ALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 52  PKKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 111

Query: 96  QRTSGSDTRRRRVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAV 155
           Q+ +  + ++++VYVCPET+C HH+P+RALGDLTGIKKHF RKHGEK WKCEKCSK YAV
Sbjct: 112 QKNT-KEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAV 171

Query: 156 HSDLKAHLKTCGSKEYKCDCGTVFSRRDSFITHREYCDALTEESNKLAGRGATMAASPPI 215
            SD KAH K CG+++Y+CDCGT+FSR+D+FITHR +CDAL EES +L    ++   +P  
Sbjct: 172 QSDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHSTSSSNLTNPNP 231

Query: 216 TLPHHDLMPIPPKPFNLSAGSMFSSSISNDHHFPSSSSAAL-------MSATALLQKAAQ 272
               H  M      FN S+  +F+SS       PS S+AAL       +SATALLQKA  
Sbjct: 232 NFQGHHFM------FNKSSSLLFTSSPLFIE--PSLSTAALSTPPTAALSATALLQKATS 285

[Close]

BLAST of CmaCh11G011330 vs. TAIR 10
Match: AT1G03840.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 1.9e-79
Identity = 155/257 (60.31%), Postives = 182/257 (70.82%), Query Frame = 0


Query: 8   SDDGG---SLSLENQLSHGSSQPHQQPQLSVPKKKRNLPGTPDPDAEVVALSPGTLMATN 67
           S  GG   S S  + + H     H+     + KKKRNLPG PDP+AEV+ALSP TLMATN
Sbjct: 9   SSSGGYVQSSSTTDHVDHHHHDQHESLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATN 68

Query: 68  RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRRRVYVCPETSCVHHNPARA 127
           RF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQRT  S   R+RVYVCPE SCVHH+P RA
Sbjct: 69  RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRT--SKEVRKRVYVCPEKSCVHHHPTRA 128

Query: 128 LGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTCGSKEYKCDCGTVFSRRDS 187
           LGDLTGIKKHF RKHGEK WKCEKC+K+YAV SD KAH KTCG++EY+CDCGT+FSRRDS
Sbjct: 129 LGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDS 188

Query: 188 FITHREYCDALTEESNKL--AGRGATMAASPPITLPHHDLM------PIPPKPFNLSAGS 247
           FITHR +CDAL EE+ +L  A    + AA+    L +H LM      P  P+P +   G 
Sbjct: 189 FITHRAFCDALAEETARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSFPFGP 248

Query: 248 MFSSSISNDHHFPSSSS 254
                  + H FP +++
Sbjct: 249 P-QPQHHHHHQFPITTN 262

[Close]

BLAST of CmaCh11G011330 vs. TAIR 10
Match: AT3G13810.1 (indeterminate(ID)-domain 11 )

HSP 1 Score: 293.9 bits (751), Expect = 1.9e-79
Identity = 184/395 (46.58%), Postives = 215/395 (54.43%), Query Frame = 0


Query: 1   MSKTSGCSDDGGSLSLENQLS---------HGSSQPHQQPQLSVP-----KKKRNLPGTP 60
           MS  +  S D  S+S  N            H   Q  QQ QL VP     KK+RN PG P
Sbjct: 20  MSNLTSASGDQASVSSGNITEASGSNYFPHHQQQQEQQQQQLVVPDSQTQKKRRNQPGNP 79

Query: 61  DPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSDTRRR 120
           DP++EV+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR S  +  R+
Sbjct: 80  DPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR-SNKEVIRK 139

Query: 121 RVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKYAVHSDLKAHLKTC 180
           +VYVCPE SCVHH+P+RALGDLTGIKKHF RKHGEK WKC+KCSKKYAV SD KAH KTC
Sbjct: 140 KVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTC 199

Query: 181 GSKEYKCDCGTVFSRRDSFITHREYCDALTEES--------NKLAGRGATMAASPPITLP 240
           G+KEY+CDCGT+FSRRDSFITHR +C+AL EE+        N+   +   +      + P
Sbjct: 200 GTKEYRCDCGTLFSRRDSFITHRAFCEALAEETAREVVIPQNQNNNQPNPLLIHQSASHP 259

Query: 241 HHDLMPIPPKPFNLSAGSMFSSSISNDHHF------------------------------ 294
           HH     P    + S+ S  + +I N  HF                              
Sbjct: 260 HHHHQTQPTINVSSSSSSSHNHNIINSLHFDTNNGNTNNSNNSNNHLHTFPMKKEQQSND 319

[Close]

BLAST of CmaCh11G011330 vs. TAIR 10
Match: AT5G66730.1 (C2H2-like zinc finger protein )

HSP 1 Score: 293.5 bits (750), Expect = 2.5e-79
Identity = 137/168 (81.55%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 34  SVPKKKRNLPGTPDPDAEVVALSPGTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 93
           SV KKKRNLPG PDPDAEV+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK
Sbjct: 29  SVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 88

Query: 94  LKQRTSGSDTRRRRVYVCPETSCVHHNPARALGDLTGIKKHFSRKHGEKNWKCEKCSKKY 153
           L+QR+  +   R++VYVCP + CVHH+P+RALGDLTGIKKHF RKHGEK WKCEKCSKKY
Sbjct: 89  LRQRS--TKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKY 148

Query: 154 AVHSDLKAHLKTCGSKEYKCDCGTVFSRRDSFITHREYCDALTEESNK 202
           AV SD KAH K CG+KEYKCDCGT+FSRRDSFITHR +CDAL EES K
Sbjct: 149 AVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAK 194

The following BLAST results are available for this feature:

BLAST of CmaCh11G011330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1F5	3.4e-81	51.86	Protein indeterminate-domain 7 OS=Arabidopsis thaliana OX=3702 GN=IDD7 PE=2 SV=1	[more]
O22759	2.8e-80	62.55	Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV...	[more]
Q9LRW7	2.7e-78	46.58	Protein indeterminate-domain 11 OS=Arabidopsis thaliana OX=3702 GN=IDD11 PE=2 SV...	[more]
Q9ZWA6	2.7e-78	60.31	Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1	[more]
Q9LVQ7	3.5e-78	81.55	Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1	[more]

BLAST of CmaCh11G011330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55110.1	2.4e-82	51.86	indeterminate(ID)-domain 7	[more]
AT4G02670.1	2.0e-81	62.55	indeterminate(ID)-domain 12	[more]
AT1G03840.1	1.9e-79	60.31	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G13810.1	1.9e-79	46.58	indeterminate(ID)-domain 11	[more]
AT5G66730.1	2.5e-79	81.55	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 109..139 e-value: 110.0 score: 4.1 coord: 144..164 e-value: 38.0 score: 8.1 coord: 66..88 e-value: 0.017 score: 24.3
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 66..88 e-value: 0.0036 score: 17.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 68..88
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 66..88 score: 10.948853
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 144..172 score: 8.558796
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 44..115 e-value: 1.3E-5 score: 26.9
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 122..202 e-value: 1.5E-8 score: 36.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR10593	SERINE/THREONINE-PROTEIN KINASE RIO	coord: 241..291
None	No IPR available	PANTHER	PTHR10593:SF181	PROTEIN INDETERMINATE-DOMAIN 2-LIKE	coord: 241..291
None	No IPR available	PANTHER	PTHR10593:SF181	PROTEIN INDETERMINATE-DOMAIN 2-LIKE	coord: 13..204
None	No IPR available	PANTHER	PTHR10593	SERINE/THREONINE-PROTEIN KINASE RIO	coord: 13..204
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 65..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G011330.1	CmaCh11G011330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity