Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAAGCTAATTATATAAGTCCCCAAAATCATCCAATTATCCATTTCCCTTTCAATGGGAGGTTCCATATCTAGAACAATCTGCATTCTTCTCTGATAATGTATTCTTCATCTTCTTTCCAATTGATTTTCCAGCGTTGATTGCGTAAGGAAACTGTAAATTTCATCAGCGAATTGCAACGCCTGTCCTTTCTTTCGTGAGGGAACTGTAAATTCCACCACCGATTCGCAAGGAAATGACCGCCGGACCTTCGAAGAAGAGGCAGCGGGTTCAACAATCCGCCTCCACCAGCCGCCACTCCTCCGTCATCCCTACTATCGACTGCTCCTCCTTACCAGATAAGTCCTCCACAGAAGTCTCTAAAAAGCCCCTTAATCTCCGCCGTAATTCATCGTTTTCCTCCATCGCCGCCTTCAACGACGCCTCCACTGCCGATATCCTCCTCCGTCTGTATTTAGAGGTTACTCCTTTCGATTCGTCTGATTCCGAATTCATTACGTCTTCCGACGTCCAGATTTATCTCCATTCGCATGTTCTTCGCCGATCCAAGTACTTTTCTGCTCTGTTATCCGATCGATGGCAGCCTCAGAAGGATGATGATTCCAGTCCTTTGAGATTAGGTTTTGGTGTCCCGGCGGCGCATGGCTCCATGGATAGCCATTTGGCTGTTCTTGAGCTTCTTTATGTCGATGATATGACGGAGGCTATAGATAGCGCGAAGACGGCGTTGGATCTCCTCCCTGTCGCGCTTAAATTTCTTTTCGAGGATTGCGTGAAGTCCTGCGTTCGATTCCTCGAGGCCGTGCCGTGGACCGATGAAGAGGAAAAGAGAGTTATGAATTTGATACCATTTCTGCAGGAGGAGGAATCGAGAGAGCTTCTTTCTAGGGTTTCGCCTGGCCGGAATGATTCCTGCGAGGAAATGTTGCAGGGACTCATTTTAGCTGCCATTCATAACTATCCCAATATGGCTTTCGTGAAGGCATTTGTGGCGAAGCTTTTGAAGGATTTTTCATCGAAGGAGTCGGCGAAGAGAGTGCTGAAGCGGGCATTCGAGACGAGCTTGAAGGTCGTGAAGGAATCATTGGAGGAATATTCGAGCCCGAATTTTAGAGGAGATCATAACGAGACGGAGGCCATTCAGAGGCTGAATTTGCATACTGCAATGACGAATGCTAAGCATTTGTCGTGGCTGGTCGAGAGGATGATTGAATTGAGGGTGGCGGATGTTGCTGTGGTTGAATGGAGTGAACAGGCTTCTTTTACTGCAGATTTACAGAGAGCATTTCGAGACGATGCGTGGCGGGGCATTGTGCCGGGGTTTCCTTCGGTTCTTCTGCGATGTACCTCGAAGCTTGCCAATGCTGTTGCTGCTGGTACCATTTTGGCCACTAAACAGGTATCAACCATCTTGCACAATCTTTCCAACTTCTCATCGGTTCATGGTAATGTGCTGTCCGTTTGATTTTTTGAAAGATGGCAAAGGTCTCTTTTGGTGTTAATCTGATTGTAACAGCCTAAGTTAGGCTGATATTGTCTTTTTCTTCTCCTCAAAGGTTTTTAAACCCTTCTGCAAGGGATAGGTTTTCAAGTTCTCCTCCCAACCGACGTGGGATCTTACAATCTACTCTACTTTAGGGCCAGCGTCATCATTTTGTTCTCCAATTAATGTGGGACTCCCCAATCTTTGCTGGCACACTGCCTCGTGTCTACCTCCCTTCGGGGCTCTGCCTCTTTGCTGGCACCTCGTGTCTACCTCCCTTCGGGGCTCTGCCTCTTTGCTGGCACCTCGTGTCTACCTCCCTTCGGGGCTCTGCCTCTTTGCTGGCACCTCGTGTCTACCTCCCATCGGGGCTCTGCCTCTTCGCTGGCACTTCTTGTTGTCTTCCTCTCTTTGGGGCTCTGCCTCTTCGCTGGCACCTCGTGTCCACCTCCCTTCAGGGCTTTGCTTCTTCGCTGGCACATCGGTGTTTGGCTTTAATACCGTTAGTAAGTCCACAACTAGCGGATATTGTCCTCCTTGAACTTTCTCCGTCTTTGGGGTTCCTTATTTGCCTCCCCTCTTTGGGTTTTCCCTTCTGAGTCTCTCCTCCTTGGGCTTTCCCTCCCTCCATAAGGTTTTTAAAATGTCTCCCCAAACCTGGATCTTACAAGTTATTAATAATATAGTTAGCAAATTTTGTCTAATTTTCTAATGGGGCCATGGTTTGCTTGAGATTTCTTGCGTACAATGGGAAGGTCCGAGAGTAATGAGTTAGTCCAAAGGCATTTTTGAGGAAAAGACAAAGCCCCTTTTTCTTTCTTGCTTGCTTTTGTAATGAGAAACGAAATTCTTAATGTAGCTGTTTGGGCGTGTGGATTGATTAGAAAACTGCTTAATTTATACTTGGTTTTCACTTGTGGTTCTAACATTTCAGGTTAGAAAGAAGCTGGTCAAGCATTGGCTTCCGGTTCTGCTTGTCAGCAAAGACCATTCCCCCTTGCTTTCCAGCAACAAGAATCTGTGTATGGAGCTGGAGGAAACATTCCTAAGAATCATTTCTACCCTTCCTTTGTCTGATGCACAGGAGTTGTTGCAGCAGTGTCTTAGCTTCACCAGAAATGTTGATGATTGCCCCCACCTATTCAAAGGATTTAACACATGGTTTCGACGCGCAATGCATCCACCACAGCCAGAGAAACTTTGA
mRNA sequence
CGGAAGCTAATTATATAAGTCCCCAAAATCATCCAATTATCCATTTCCCTTTCAATGGGAGGTTCCATATCTAGAACAATCTGCATTCTTCTCTGATAATGTATTCTTCATCTTCTTTCCAATTGATTTTCCAGCGTTGATTGCGTAAGGAAACTGTAAATTTCATCAGCGAATTGCAACGCCTGTCCTTTCTTTCGTGAGGGAACTGTAAATTCCACCACCGATTCGCAAGGAAATGACCGCCGGACCTTCGAAGAAGAGGCAGCGGGTTCAACAATCCGCCTCCACCAGCCGCCACTCCTCCGTCATCCCTACTATCGACTGCTCCTCCTTACCAGATAAGTCCTCCACAGAAGTCTCTAAAAAGCCCCTTAATCTCCGCCGTAATTCATCGTTTTCCTCCATCGCCGCCTTCAACGACGCCTCCACTGCCGATATCCTCCTCCGTCTGTATTTAGAGGTTACTCCTTTCGATTCGTCTGATTCCGAATTCATTACGTCTTCCGACGTCCAGATTTATCTCCATTCGCATGTTCTTCGCCGATCCAAGTACTTTTCTGCTCTGTTATCCGATCGATGGCAGCCTCAGAAGGATGATGATTCCAGTCCTTTGAGATTAGGTTTTGGTGTCCCGGCGGCGCATGGCTCCATGGATAGCCATTTGGCTGTTCTTGAGCTTCTTTATGTCGATGATATGACGGAGGCTATAGATAGCGCGAAGACGGCGTTGGATCTCCTCCCTGTCGCGCTTAAATTTCTTTTCGAGGATTGCGTGAAGTCCTGCGTTCGATTCCTCGAGGCCGTGCCGTGGACCGATGAAGAGGAAAAGAGAGTTATGAATTTGATACCATTTCTGCAGGAGGAGGAATCGAGAGAGCTTCTTTCTAGGGTTTCGCCTGGCCGGAATGATTCCTGCGAGGAAATGTTGCAGGGACTCATTTTAGCTGCCATTCATAACTATCCCAATATGGCTTTCGTGAAGGCATTTGTGGCGAAGCTTTTGAAGGATTTTTCATCGAAGGAGTCGGCGAAGAGAGTGCTGAAGCGGGCATTCGAGACGAGCTTGAAGGTCGTGAAGGAATCATTGGAGGAATATTCGAGCCCGAATTTTAGAGGAGATCATAACGAGACGGAGGCCATTCAGAGGCTGAATTTGCATACTGCAATGACGAATGCTAAGCATTTGTCGTGGCTGGTCGAGAGGATGATTGAATTGAGGGTGGCGGATGTTGCTGTGGTTGAATGGAGTGAACAGGCTTCTTTTACTGCAGATTTACAGAGAGCATTTCGAGACGATGCGTGGCGGGGCATTGTGCCGGGGTTTCCTTCGGTTCTTCTGCGATGTACCTCGAAGCTTGCCAATGCTGTTGCTGCTGGTACCATTTTGGCCACTAAACAGGTTAGAAAGAAGCTGGTCAAGCATTGGCTTCCGGTTCTGCTTGTCAGCAAAGACCATTCCCCCTTGCTTTCCAGCAACAAGAATCTGTGTATGGAGCTGGAGGAAACATTCCTAAGAATCATTTCTACCCTTCCTTTGTCTGATGCACAGGAGTTGTTGCAGCAGTGTCTTAGCTTCACCAGAAATGTTGATGATTGCCCCCACCTATTCAAAGGATTTAACACATGGTTTCGACGCGCAATGCATCCACCACAGCCAGAGAAACTTTGA
Coding sequence (CDS)
ATGACCGCCGGACCTTCGAAGAAGAGGCAGCGGGTTCAACAATCCGCCTCCACCAGCCGCCACTCCTCCGTCATCCCTACTATCGACTGCTCCTCCTTACCAGATAAGTCCTCCACAGAAGTCTCTAAAAAGCCCCTTAATCTCCGCCGTAATTCATCGTTTTCCTCCATCGCCGCCTTCAACGACGCCTCCACTGCCGATATCCTCCTCCGTCTGTATTTAGAGGTTACTCCTTTCGATTCGTCTGATTCCGAATTCATTACGTCTTCCGACGTCCAGATTTATCTCCATTCGCATGTTCTTCGCCGATCCAAGTACTTTTCTGCTCTGTTATCCGATCGATGGCAGCCTCAGAAGGATGATGATTCCAGTCCTTTGAGATTAGGTTTTGGTGTCCCGGCGGCGCATGGCTCCATGGATAGCCATTTGGCTGTTCTTGAGCTTCTTTATGTCGATGATATGACGGAGGCTATAGATAGCGCGAAGACGGCGTTGGATCTCCTCCCTGTCGCGCTTAAATTTCTTTTCGAGGATTGCGTGAAGTCCTGCGTTCGATTCCTCGAGGCCGTGCCGTGGACCGATGAAGAGGAAAAGAGAGTTATGAATTTGATACCATTTCTGCAGGAGGAGGAATCGAGAGAGCTTCTTTCTAGGGTTTCGCCTGGCCGGAATGATTCCTGCGAGGAAATGTTGCAGGGACTCATTTTAGCTGCCATTCATAACTATCCCAATATGGCTTTCGTGAAGGCATTTGTGGCGAAGCTTTTGAAGGATTTTTCATCGAAGGAGTCGGCGAAGAGAGTGCTGAAGCGGGCATTCGAGACGAGCTTGAAGGTCGTGAAGGAATCATTGGAGGAATATTCGAGCCCGAATTTTAGAGGAGATCATAACGAGACGGAGGCCATTCAGAGGCTGAATTTGCATACTGCAATGACGAATGCTAAGCATTTGTCGTGGCTGGTCGAGAGGATGATTGAATTGAGGGTGGCGGATGTTGCTGTGGTTGAATGGAGTGAACAGGCTTCTTTTACTGCAGATTTACAGAGAGCATTTCGAGACGATGCGTGGCGGGGCATTGTGCCGGGGTTTCCTTCGGTTCTTCTGCGATGTACCTCGAAGCTTGCCAATGCTGTTGCTGCTGGTACCATTTTGGCCACTAAACAGGTTAGAAAGAAGCTGGTCAAGCATTGGCTTCCGGTTCTGCTTGTCAGCAAAGACCATTCCCCCTTGCTTTCCAGCAACAAGAATCTGTGTATGGAGCTGGAGGAAACATTCCTAAGAATCATTTCTACCCTTCCTTTGTCTGATGCACAGGAGTTGTTGCAGCAGTGTCTTAGCTTCACCAGAAATGTTGATGATTGCCCCCACCTATTCAAAGGATTTAACACATGGTTTCGACGCGCAATGCATCCACCACAGCCAGAGAAACTTTGA
Protein sequence
MTAGPSKKRQRVQQSASTSRHSSVIPTIDCSSLPDKSSTEVSKKPLNLRRNSSFSSIAAFNDASTADILLRLYLEVTPFDSSDSEFITSSDVQIYLHSHVLRRSKYFSALLSDRWQPQKDDDSSPLRLGFGVPAAHGSMDSHLAVLELLYVDDMTEAIDSAKTALDLLPVALKFLFEDCVKSCVRFLEAVPWTDEEEKRVMNLIPFLQEEESRELLSRVSPGRNDSCEEMLQGLILAAIHNYPNMAFVKAFVAKLLKDFSSKESAKRVLKRAFETSLKVVKESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVAVVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKLVKHWLPVLLVSKDHSPLLSSNKNLCMELEETFLRIISTLPLSDAQELLQQCLSFTRNVDDCPHLFKGFNTWFRRAMHPPQPEKL
Homology
BLAST of CmaCh11G010990 vs. ExPASy Swiss-Prot
Match:
Q8RX01 (BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 2.0e-19
Identity = 109/447 (24.38%), Postives = 195/447 (43.62%), Query Frame = 0
Query: 50 RNSSFSSIAAFNDASTADILLRLYLEVTPFDSSDSEFITSSDVQIYLHSHVL-RRSKYFS 109
R++ + F D S++DI++RL E D IY HS +L +S+YF+
Sbjct: 4 RDNQAEASYTFGDRSSSDIVVRLRNE------------EGRDDWIYCHSKILSEKSQYFA 63
Query: 110 ALLSDRWQPQKDDDSSPLRLGFGVPAAHGSMDSHLAVLELLYV--DDMTE--AIDSAKTA 169
LSD+W K DS R V D H+ +L LLYV DD+ E + K+A
Sbjct: 64 DRLSDKWPTCKILDS---RYCVEVICQESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSA 123
Query: 170 LDLLPVALKFLFEDCVKSCVRFLEAVPWTDEEEKRVMNLIPFLQEEESRELLSRVSPGRN 229
L +L VA + V +CV +LEAVPW + EE+ ++ ++P + E+ +L+R+ P
Sbjct: 124 LGILSVAKELSCPQIVTACVNYLEAVPWEEGEEEEILRIVPRI-GSEAEPILARLQPVDQ 183
Query: 230 DSCEEMLQGLILAAIHNYP-NMAFVKAFVAKLLKDFSSKESAKRVLKRAFETSLKVVK-- 289
+ E+ A + P + +K+ + ++ +++ +L E L+V +
Sbjct: 184 SAVLEIFVSAFRFATSSPPLLLGDIKSSAQEQIEYMITEDDDAPLLIADEEVKLEVKQCV 243
Query: 290 --------ESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVA 349
+ LEE + E+E I + + + + W+ + + ++ V
Sbjct: 244 KSLFVRFFQCLEEITLKPV-----ESEVINKKGSFRMVLS--DMCWVFQILTKMEVVRDF 303
Query: 350 VVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKL 409
V+ W++ + + + ++ T+K+ A+ GT++ R ++
Sbjct: 304 VITWADISEKLVKVVEQLETTVVEAV--EIRVKVIEVTAKVIEAIGYGTVILPTAKRLQM 363
Query: 410 VKHWLPVLLVSKD--HSPLLSSNKN----------LCMELEETFLRIISTLPLSDAQELL 469
VK WLP + +K SP+ +N + LE +F+ II LP +D E+L
Sbjct: 364 VKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQAEIL 422
BLAST of CmaCh11G010990 vs. ExPASy Swiss-Prot
Match:
Q9CAJ9 (BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana OX=3702 GN=At1g63850 PE=1 SV=1)
HSP 1 Score: 97.1 bits (240), Expect = 5.9e-19
Identity = 122/477 (25.58%), Postives = 215/477 (45.07%), Query Frame = 0
Query: 15 SASTSRHSSVIPTIDCSSLPDKSSTEVSKKPLNLRRNSSFSSIAA----FNDASTADILL 74
S+S+S S+ +++ + K+ L ++R S I + FND +++D+ L
Sbjct: 86 SSSSSSSSAAATAARTTNVNHLVISAQDKQALAMQRISDLLVIRSPGNQFNDPNSSDVKL 145
Query: 75 RLYLEVTPFDSSDSEFITSSDVQIYLHSHVL-RRSKYFSALLSDRWQPQK-DDDSSPLRL 134
L S D IT + +H +L S++F+ LSDRW Q+ SSP +
Sbjct: 146 TL-------SSKDGISIT-----MCVHRQILVAHSRFFAMKLSDRWSKQQLPPSSSPYIV 205
Query: 135 GFGVPAAHGSMDSHLAVLELLYVDDMTEAI--DSAKTALDLLPVALKFLFEDCVKSCVRF 194
+ ++ ++ L L+Y D+ + + L +L V+ F+ V SC+ +
Sbjct: 206 EI---SDCDDVEVYIETLMLMYCRDLRKKMMRHDVSRVLGILKVSAAIGFDAGVLSCLEY 265
Query: 195 LEAVPWTDEEEKRVMNLIPFLQEEE--SRELLSRV----SPGRN----DSCEEMLQGLIL 254
LEA PW+++EE R+ +L+ L E + E+L RV S G N S +E+L L+
Sbjct: 266 LEAAPWSEDEEYRIASLLSELHLENVGATEVLRRVSVEASNGNNGSNGGSNDEVLLNLLH 325
Query: 255 AAIHNYPNMA--FVKAFVAKLLKDFSS-KESAKRVLKRAFETSLKVVKESLEEYSSPNFR 314
+ A +K V+K+L++ SS + K L A + L +K + + +
Sbjct: 326 IVLEGKDEKARRDMKTLVSKMLRENSSGNDLRKESLYLACDGCLHKLKRQFLQAAESDLE 385
Query: 315 GDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVAVVEWSEQASFTADLQRAFRD 374
N+ A +L W+++ +I+ ++A+ +V W A L
Sbjct: 386 ------------NVDQIARQADNLHWILDILIDRQIAEDFIVMW-------ASLSELSEV 445
Query: 375 DAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKLVKHWLPVLLVSKDHSPLLSS 434
+ +V F + R T+++ + G IL K+VR L+++WL D + +
Sbjct: 446 HSKVPVVHRFE--ISRVTARIFVGIGKGQILTPKEVRCLLLRNWLTPFY--DDFGWMRRA 505
Query: 435 NKNLCMEL-EETFLRIISTLPLSDAQELLQQCLS-FTRNVDDCPHLFKGFNTWFRRA 469
+K L L E+ I TLPL+ QE F + +DCP++ +GF W+RRA
Sbjct: 506 SKGLDRYLIEDGLSNTILTLPLAWQQEFFLAWFDRFLNSNEDCPNIQRGFEVWWRRA 524
BLAST of CmaCh11G010990 vs. ExPASy Swiss-Prot
Match:
Q9SVM0 (BTB/POZ domain-containing protein At3g50780 OS=Arabidopsis thaliana OX=3702 GN=At3g50780 PE=2 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 3.2e-17
Identity = 91/344 (26.45%), Postives = 156/344 (45.35%), Query Frame = 0
Query: 142 HLAVLELLYVDDMTEAI--DSAKTALDLLPVALKFLFEDCVKSCVRFLEAVPWT-DEEEK 201
++ + L+Y DM + + + L +L VA F C++SC+ +LEAVPW +EEE+
Sbjct: 180 YVETIGLMYCKDMKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLDYLEAVPWVGEEEEE 239
Query: 202 RVMNLIPFLQEE--ESRELLSRVSPGRNDSCEEMLQGLILAAIHNYPNMA--FVKAFVAK 261
+V++ I L+ E +L RV+ D +E L +I + + + +K+ V K
Sbjct: 240 KVISSILRLKTEGVGVTPVLKRVASNAVDPPKETLSRIIELVLRSKEEKSRREMKSIVLK 299
Query: 262 LLKDFSSKESAKRVLKRAFETSLKVVKESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNA 321
LL++ + A +S + +S+ G+ ET+ Q A
Sbjct: 300 LLREQNGANVADN-FNDTIYSSCQTCLDSVLSLFKQASEGEKPETDTKQ------IAVEA 359
Query: 322 KHLSWLVERMIELRVADVAVVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKL 381
+L+WL++ + E + A+ V W+ Q ++ + + R TS+L
Sbjct: 360 DNLTWLLDVLAERQAAEEFSVTWANQKELALLHEKLPLMSRYH---------ISRVTSRL 419
Query: 382 ANAVAAGTILATKQVRKKLVKHWLPVLLVSKDHSPLLSSNKNLCMEL-EETFLRIISTLP 441
+ G +L +K R L+ WL L D++ L ++ +L EE R I TLP
Sbjct: 420 FIGIGRGELLPSKDTRLLLLTTWLQPLF--NDYNWLQHGCRSFDGKLVEEGIGRTILTLP 479
Query: 442 LSDAQELLQQCL-SFTRNVDDCPHLFKGFNTWFRRAMHPPQPEK 477
L D Q +L L SF D CP+L + F W+RR+ P ++
Sbjct: 480 LEDQQSILLSWLGSFLNGGDGCPNLQRAFEVWWRRSFIRPYSDR 505
BLAST of CmaCh11G010990 vs. ExPASy Swiss-Prot
Match:
Q9SKH2 (BTB/POZ domain-containing protein At2g13690 OS=Arabidopsis thaliana OX=3702 GN=PRL1-IFG PE=2 SV=2)
HSP 1 Score: 82.4 bits (202), Expect = 1.5e-14
Identity = 77/317 (24.29%), Postives = 149/317 (47.00%), Query Frame = 0
Query: 164 ALDLLPVALKFLFEDCVKSCVRFLEAVPWTDEEEKRVMNLIPF--LQEEESRELLSRVSP 223
A+D+L VA F V SC+++LEAVPWT++EE+++ L+ ++ E+L+R +
Sbjct: 235 AIDVLEVAAGIKFSRAVLSCLKYLEAVPWTEDEEEKLRRLLGIYSFDDDAVSEILARFNS 294
Query: 224 GRNDSCEEMLQGLILAAIHNYPNM-------AFVKAFVAK-LLKDFSSKESAKRVLKRAF 283
++ ++ L ++ +I + ++ + VK + K + + E K + RA
Sbjct: 295 NETENLQDSLSKKLVWSITSCSDVNPRNELKSLVKGLLCKSSVYEKEQPEINKEDIYRAG 354
Query: 284 ETSLKVVKESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVA 343
+ + + + EE SS + E I+ ++ ++++WL+E MI+ +A+
Sbjct: 355 KCCVDSLAKLFEEGSSSS--SSKKEKPLIESIS-----REVENINWLLEIMIDREIAEEF 414
Query: 344 VVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKL 403
V W +Q +R + P + R T + A+ + + R L
Sbjct: 415 VEIWGKQRRLVEMHER---------VSPMVRYEVSRVTGAIFIAMGKRRVQCGGEARAGL 474
Query: 404 VKHWLPVLLVSKDHSPLLSSNKNLCM-ELEETFLRIISTLPLSDAQELLQQCLS-FTRNV 463
V+ W +LV D L K L M E+EE + + TLP+ + ++ + F+++
Sbjct: 475 VEAWFKPMLV--DFGWLQRCKKGLDMREVEEGMGQTLLTLPVKEQYQVFMEWFRWFSKHG 533
Query: 464 DDCPHLFKGFNTWFRRA 469
+CP+L K F W+RR+
Sbjct: 535 TECPNLSKAFQIWWRRS 533
BLAST of CmaCh11G010990 vs. ExPASy Swiss-Prot
Match:
Q9LVG9 (BTB/POZ domain-containing protein At5g60050 OS=Arabidopsis thaliana OX=3702 GN=At5g60050 PE=2 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 7.0e-12
Identity = 75/345 (21.74%), Postives = 154/345 (44.64%), Query Frame = 0
Query: 139 MDSHLAVLELLYVDDMTEAI--DSAKTALDLLPVALKFLFEDCVKSCVRFLEAVPWTDEE 198
++ ++ + L+Y DD+ + + ++ L LL V+ F++ V SC+ LEAVPW+++E
Sbjct: 153 LEIYVETVVLMYSDDLKKKLIGENVIKILALLKVSAAISFDEGVMSCLEHLEAVPWSEDE 212
Query: 199 EKRVMNLIP--FLQEEESRELLSRVSPGRNDS-----CEEMLQGLILAAIHNYPNMA--F 258
E+ V+ + L ++ +L RVS + S +++ L+ + + A
Sbjct: 213 EETVVTCLEELHLPDDSVTLILQRVSSQPSTSSTRTRTDDIFSKLLTGVLQAKDDKARRE 272
Query: 259 VKAFVAKLLKDFSSKESAKRVLKRAFETSLKVVKESLEEYSSPNFRGDHNETEAIQRLNL 318
+K + KL+++ + + ++ L L + L E ++ N+ + +
Sbjct: 273 MKVLIFKLVREEADYDVSRDTLYGLCHRCLTSLVLCLSEVTT-----QMNDPGKDRGALM 332
Query: 319 HTAMTNAKHLSWLVERMIELRVADVAVVEWSEQ---ASFTADLQRAFRDDAWRGIVPGFP 378
A ++ W+V+ +IE ++ V W++Q A+ + + +R +
Sbjct: 333 GEIAREADNMLWMVDILIEKKLCSEFVKLWADQKELANLHSKIPTMYRHE---------- 392
Query: 379 SVLLRCTSKLANAVAAGTILATKQVRKKLVKHWLPVLLVSKDHSPLLSSNKNLCMELEET 438
+ + T+++ + G IL ++ R ++ WL L LSS +E+
Sbjct: 393 --ISKITAQICVGIGKGRILVNRETRFAVLNTWLEALYDDFGWMRRLSSRSLDRKLVEDG 452
Query: 439 FLRIISTLPLSDAQELLQQCLS-FTRNVDDCPHLFKGFNTWFRRA 469
+ I TL L Q +L + F DDCP++ + F W+RRA
Sbjct: 453 LSQTILTLSLRQQQVILMKWFDRFLSKGDDCPNVQRAFEVWWRRA 480
BLAST of CmaCh11G010990 vs. TAIR 10
Match:
AT3G05675.2 (BTB/POZ domain-containing protein )
HSP 1 Score: 98.6 bits (244), Expect = 1.4e-20
Identity = 109/447 (24.38%), Postives = 195/447 (43.62%), Query Frame = 0
Query: 50 RNSSFSSIAAFNDASTADILLRLYLEVTPFDSSDSEFITSSDVQIYLHSHVL-RRSKYFS 109
R++ + F D S++DI++RL E D IY HS +L +S+YF+
Sbjct: 4 RDNQAEASYTFGDRSSSDIVVRLRNE------------EGRDDWIYCHSKILSEKSQYFA 63
Query: 110 ALLSDRWQPQKDDDSSPLRLGFGVPAAHGSMDSHLAVLELLYV--DDMTE--AIDSAKTA 169
LSD+W K DS R V D H+ +L LLYV DD+ E + K+A
Sbjct: 64 DRLSDKWPTCKILDS---RYCVEVICQESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSA 123
Query: 170 LDLLPVALKFLFEDCVKSCVRFLEAVPWTDEEEKRVMNLIPFLQEEESRELLSRVSPGRN 229
L +L VA + V +CV +LEAVPW + EE+ ++ ++P + E+ +L+R+ P
Sbjct: 124 LGILSVAKELSCPQIVTACVNYLEAVPWEEGEEEEILRIVPRI-GSEAEPILARLQPVDQ 183
Query: 230 DSCEEMLQGLILAAIHNYP-NMAFVKAFVAKLLKDFSSKESAKRVLKRAFETSLKVVK-- 289
+ E+ A + P + +K+ + ++ +++ +L E L+V +
Sbjct: 184 SAVLEIFVSAFRFATSSPPLLLGDIKSSAQEQIEYMITEDDDAPLLIADEEVKLEVKQCV 243
Query: 290 --------ESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVA 349
+ LEE + E+E I + + + + W+ + + ++ V
Sbjct: 244 KSLFVRFFQCLEEITLKPV-----ESEVINKKGSFRMVLS--DMCWVFQILTKMEVVRDF 303
Query: 350 VVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKL 409
V+ W++ + + + ++ T+K+ A+ GT++ R ++
Sbjct: 304 VITWADISEKLVKVVEQLETTVVEAV--EIRVKVIEVTAKVIEAIGYGTVILPTAKRLQM 363
Query: 410 VKHWLPVLLVSKD--HSPLLSSNKN----------LCMELEETFLRIISTLPLSDAQELL 469
VK WLP + +K SP+ +N + LE +F+ II LP +D E+L
Sbjct: 364 VKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQAEIL 422
BLAST of CmaCh11G010990 vs. TAIR 10
Match:
AT3G05675.1 (BTB/POZ domain-containing protein )
HSP 1 Score: 98.6 bits (244), Expect = 1.4e-20
Identity = 109/447 (24.38%), Postives = 195/447 (43.62%), Query Frame = 0
Query: 50 RNSSFSSIAAFNDASTADILLRLYLEVTPFDSSDSEFITSSDVQIYLHSHVL-RRSKYFS 109
R++ + F D S++DI++RL E D IY HS +L +S+YF+
Sbjct: 4 RDNQAEASYTFGDRSSSDIVVRLRNE------------EGRDDWIYCHSKILSEKSQYFA 63
Query: 110 ALLSDRWQPQKDDDSSPLRLGFGVPAAHGSMDSHLAVLELLYV--DDMTE--AIDSAKTA 169
LSD+W K DS R V D H+ +L LLYV DD+ E + K+A
Sbjct: 64 DRLSDKWPTCKILDS---RYCVEVICQESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSA 123
Query: 170 LDLLPVALKFLFEDCVKSCVRFLEAVPWTDEEEKRVMNLIPFLQEEESRELLSRVSPGRN 229
L +L VA + V +CV +LEAVPW + EE+ ++ ++P + E+ +L+R+ P
Sbjct: 124 LGILSVAKELSCPQIVTACVNYLEAVPWEEGEEEEILRIVPRI-GSEAEPILARLQPVDQ 183
Query: 230 DSCEEMLQGLILAAIHNYP-NMAFVKAFVAKLLKDFSSKESAKRVLKRAFETSLKVVK-- 289
+ E+ A + P + +K+ + ++ +++ +L E L+V +
Sbjct: 184 SAVLEIFVSAFRFATSSPPLLLGDIKSSAQEQIEYMITEDDDAPLLIADEEVKLEVKQCV 243
Query: 290 --------ESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVA 349
+ LEE + E+E I + + + + W+ + + ++ V
Sbjct: 244 KSLFVRFFQCLEEITLKPV-----ESEVINKKGSFRMVLS--DMCWVFQILTKMEVVRDF 303
Query: 350 VVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKL 409
V+ W++ + + + ++ T+K+ A+ GT++ R ++
Sbjct: 304 VITWADISEKLVKVVEQLETTVVEAV--EIRVKVIEVTAKVIEAIGYGTVILPTAKRLQM 363
Query: 410 VKHWLPVLLVSKD--HSPLLSSNKN----------LCMELEETFLRIISTLPLSDAQELL 469
VK WLP + +K SP+ +N + LE +F+ II LP +D E+L
Sbjct: 364 VKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQAEIL 422
BLAST of CmaCh11G010990 vs. TAIR 10
Match:
AT1G63850.1 (BTB/POZ domain-containing protein )
HSP 1 Score: 97.1 bits (240), Expect = 4.2e-20
Identity = 122/477 (25.58%), Postives = 215/477 (45.07%), Query Frame = 0
Query: 15 SASTSRHSSVIPTIDCSSLPDKSSTEVSKKPLNLRRNSSFSSIAA----FNDASTADILL 74
S+S+S S+ +++ + K+ L ++R S I + FND +++D+ L
Sbjct: 86 SSSSSSSSAAATAARTTNVNHLVISAQDKQALAMQRISDLLVIRSPGNQFNDPNSSDVKL 145
Query: 75 RLYLEVTPFDSSDSEFITSSDVQIYLHSHVL-RRSKYFSALLSDRWQPQK-DDDSSPLRL 134
L S D IT + +H +L S++F+ LSDRW Q+ SSP +
Sbjct: 146 TL-------SSKDGISIT-----MCVHRQILVAHSRFFAMKLSDRWSKQQLPPSSSPYIV 205
Query: 135 GFGVPAAHGSMDSHLAVLELLYVDDMTEAI--DSAKTALDLLPVALKFLFEDCVKSCVRF 194
+ ++ ++ L L+Y D+ + + L +L V+ F+ V SC+ +
Sbjct: 206 EI---SDCDDVEVYIETLMLMYCRDLRKKMMRHDVSRVLGILKVSAAIGFDAGVLSCLEY 265
Query: 195 LEAVPWTDEEEKRVMNLIPFLQEEE--SRELLSRV----SPGRN----DSCEEMLQGLIL 254
LEA PW+++EE R+ +L+ L E + E+L RV S G N S +E+L L+
Sbjct: 266 LEAAPWSEDEEYRIASLLSELHLENVGATEVLRRVSVEASNGNNGSNGGSNDEVLLNLLH 325
Query: 255 AAIHNYPNMA--FVKAFVAKLLKDFSS-KESAKRVLKRAFETSLKVVKESLEEYSSPNFR 314
+ A +K V+K+L++ SS + K L A + L +K + + +
Sbjct: 326 IVLEGKDEKARRDMKTLVSKMLRENSSGNDLRKESLYLACDGCLHKLKRQFLQAAESDLE 385
Query: 315 GDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVAVVEWSEQASFTADLQRAFRD 374
N+ A +L W+++ +I+ ++A+ +V W A L
Sbjct: 386 ------------NVDQIARQADNLHWILDILIDRQIAEDFIVMW-------ASLSELSEV 445
Query: 375 DAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKLVKHWLPVLLVSKDHSPLLSS 434
+ +V F + R T+++ + G IL K+VR L+++WL D + +
Sbjct: 446 HSKVPVVHRFE--ISRVTARIFVGIGKGQILTPKEVRCLLLRNWLTPFY--DDFGWMRRA 505
Query: 435 NKNLCMEL-EETFLRIISTLPLSDAQELLQQCLS-FTRNVDDCPHLFKGFNTWFRRA 469
+K L L E+ I TLPL+ QE F + +DCP++ +GF W+RRA
Sbjct: 506 SKGLDRYLIEDGLSNTILTLPLAWQQEFFLAWFDRFLNSNEDCPNIQRGFEVWWRRA 524
BLAST of CmaCh11G010990 vs. TAIR 10
Match:
AT3G50780.1 (BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 91.3 bits (225), Expect = 2.3e-18
Identity = 91/344 (26.45%), Postives = 156/344 (45.35%), Query Frame = 0
Query: 142 HLAVLELLYVDDMTEAI--DSAKTALDLLPVALKFLFEDCVKSCVRFLEAVPWT-DEEEK 201
++ + L+Y DM + + + L +L VA F C++SC+ +LEAVPW +EEE+
Sbjct: 180 YVETIGLMYCKDMKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLDYLEAVPWVGEEEEE 239
Query: 202 RVMNLIPFLQEE--ESRELLSRVSPGRNDSCEEMLQGLILAAIHNYPNMA--FVKAFVAK 261
+V++ I L+ E +L RV+ D +E L +I + + + +K+ V K
Sbjct: 240 KVISSILRLKTEGVGVTPVLKRVASNAVDPPKETLSRIIELVLRSKEEKSRREMKSIVLK 299
Query: 262 LLKDFSSKESAKRVLKRAFETSLKVVKESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNA 321
LL++ + A +S + +S+ G+ ET+ Q A
Sbjct: 300 LLREQNGANVADN-FNDTIYSSCQTCLDSVLSLFKQASEGEKPETDTKQ------IAVEA 359
Query: 322 KHLSWLVERMIELRVADVAVVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKL 381
+L+WL++ + E + A+ V W+ Q ++ + + R TS+L
Sbjct: 360 DNLTWLLDVLAERQAAEEFSVTWANQKELALLHEKLPLMSRYH---------ISRVTSRL 419
Query: 382 ANAVAAGTILATKQVRKKLVKHWLPVLLVSKDHSPLLSSNKNLCMEL-EETFLRIISTLP 441
+ G +L +K R L+ WL L D++ L ++ +L EE R I TLP
Sbjct: 420 FIGIGRGELLPSKDTRLLLLTTWLQPLF--NDYNWLQHGCRSFDGKLVEEGIGRTILTLP 479
Query: 442 LSDAQELLQQCL-SFTRNVDDCPHLFKGFNTWFRRAMHPPQPEK 477
L D Q +L L SF D CP+L + F W+RR+ P ++
Sbjct: 480 LEDQQSILLSWLGSFLNGGDGCPNLQRAFEVWWRRSFIRPYSDR 505
BLAST of CmaCh11G010990 vs. TAIR 10
Match:
AT2G13690.1 (PRLI-interacting factor, putative )
HSP 1 Score: 82.4 bits (202), Expect = 1.1e-15
Identity = 77/317 (24.29%), Postives = 149/317 (47.00%), Query Frame = 0
Query: 164 ALDLLPVALKFLFEDCVKSCVRFLEAVPWTDEEEKRVMNLIPF--LQEEESRELLSRVSP 223
A+D+L VA F V SC+++LEAVPWT++EE+++ L+ ++ E+L+R +
Sbjct: 235 AIDVLEVAAGIKFSRAVLSCLKYLEAVPWTEDEEEKLRRLLGIYSFDDDAVSEILARFNS 294
Query: 224 GRNDSCEEMLQGLILAAIHNYPNM-------AFVKAFVAK-LLKDFSSKESAKRVLKRAF 283
++ ++ L ++ +I + ++ + VK + K + + E K + RA
Sbjct: 295 NETENLQDSLSKKLVWSITSCSDVNPRNELKSLVKGLLCKSSVYEKEQPEINKEDIYRAG 354
Query: 284 ETSLKVVKESLEEYSSPNFRGDHNETEAIQRLNLHTAMTNAKHLSWLVERMIELRVADVA 343
+ + + + EE SS + E I+ ++ ++++WL+E MI+ +A+
Sbjct: 355 KCCVDSLAKLFEEGSSSS--SSKKEKPLIESIS-----REVENINWLLEIMIDREIAEEF 414
Query: 344 VVEWSEQASFTADLQRAFRDDAWRGIVPGFPSVLLRCTSKLANAVAAGTILATKQVRKKL 403
V W +Q +R + P + R T + A+ + + R L
Sbjct: 415 VEIWGKQRRLVEMHER---------VSPMVRYEVSRVTGAIFIAMGKRRVQCGGEARAGL 474
Query: 404 VKHWLPVLLVSKDHSPLLSSNKNLCM-ELEETFLRIISTLPLSDAQELLQQCLS-FTRNV 463
V+ W +LV D L K L M E+EE + + TLP+ + ++ + F+++
Sbjct: 475 VEAWFKPMLV--DFGWLQRCKKGLDMREVEEGMGQTLLTLPVKEQYQVFMEWFRWFSKHG 533
Query: 464 DDCPHLFKGFNTWFRRA 469
+CP+L K F W+RR+
Sbjct: 535 TECPNLSKAFQIWWRRS 533
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8RX01 | 2.0e-19 | 24.38 | BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q9CAJ9 | 5.9e-19 | 25.58 | BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q9SVM0 | 3.2e-17 | 26.45 | BTB/POZ domain-containing protein At3g50780 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q9SKH2 | 1.5e-14 | 24.29 | BTB/POZ domain-containing protein At2g13690 OS=Arabidopsis thaliana OX=3702 GN=P... | [more] |
Q9LVG9 | 7.0e-12 | 21.74 | BTB/POZ domain-containing protein At5g60050 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |