CmaCh11G010930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G010930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH63-like
Location	Cma_Chr11: 6019057 .. 6021298 (-)
RNA-Seq Expression	CmaCh11G010930
Synteny	CmaCh11G010930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCCATTCCCCTTTCTCTCCCTCTCTCTCTTCTGCCTTTCTCTCTCTCTCTCTACACCAATAATTCCGGCCAGTTGCAGTCACTCTCCGACCACCCCCCAACTTTTTCACCTTTATATACTTCCCACCCCCCTTTTCTCTCTCGATTAATCTTCAAACCCATTTTCCCCCTCCTTGTTGAGACCTTCTTTTGGTTCTTGGTGGTGGGATTTCCTTCAAATTTGGGGGTTTCTCTGTTTTTTTAAGGTGGGGTTTTGGAACAAAGAAAGATGAACAGAGCATTGCCAGAAATGTCGAACACGGCTGAGAATTGTGTTGACACTCTCACTGTTCTTGAGAGGCAGAGGGCTCGTTTCAAATGGCAACAAGATCAGCTTTTGTATCAGCAGCAGCAGCTGCAGTCATTCAATGGGATGATGGATTACGGCGCTGGATTTCCACCGTCGGATCACCTCACCGGGTTTCCGGGCTTCATGAGTGCAGCCGGCGCCGGCGGCGATGGTGGGTTGTCACTTGTGGAGATGGTAATGGGAGCAGTGAAGCCTGACCCTGGTTTGGAAGATGGGTGGTCTGATCCTTCTCTGTTGTTGAATCCCCCCACTGCTTATGAACTAAATTCTTCTCTTTCTAGAACCTCCAGCTGCCCGCCGGCGGTGAATCCAGCGGCGGCGGCTGGAAGAGAAAGCTTCAAGAAAAGGAAAGCTGAGAAAGTTCAGAACCCCATTAACAACAAAGAGAAGAGGATCAAAGCAAGTTCAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATTATCAAAAACGACAGATCAAAACAGCACCAAGAACAACAATTCAACCATTACAACCACAACAAACAACAACAGAGAAACTTCAGCTGATACCTCCAAAGCCTCAGAGGTTAAAAAGCCTGATTACATTCATGTCAGAGCTCGCCGTGGCCAAGCCACTGATAGCCATAGCTTAGCAGAAAGAGTAAGCCAAGAAAACACTCTATTTCCGCTTCTGGGTTGCTTATTCTTTCTTTGATTTCTTTCATTTTGACCCATTTGGGGGGAGTTTCCTTTAACCAATCATGTTTTTTTTTTTTTTTTTTTGTGTTCATGCAGGCTAGAAGGGAAAAAATCAGTGAAAGAATGAAGTACTTGCAAGATTTAGTACCAGGATGCAACAAAATCACTGGAAAAGCTGGAATGCTCGACGAGATCATAAACTATGTTCAATCTCTTCAAAGACAAGTGGAGGTAAAAATCAAGTTTTCTCAATCTCTACACACAAAAATCCTACGTTCCATTGAAAAAAATCGTTCTGAAATCGAAAATTTTCTTTGTGGCATTTTCACAAACAGTTCTTGTCCATGAAGTTAGCTGCAGTTAATCCAAGGCTGGACTTCAATGTGGATGATCTCTTCCTCAAAGAGGTAACAGAATTAAATGATTCCCAAACTCCAAACTCATTTAATCAGATTAAAATCGACGGCGGAATCTAAAATTTTCCCGGGAAACAAACAAACAAACAGGTATTTCCCCCTCCTTGCACCACCGCAAACTTCGCGGCGATCGGTGGAATTTCATCAGAGATCACAGATCCTTCATCCTACTTCCAATTTAATCGAAACAATCAACAAATCGTTCCGTGTTGTGGATTAGAAATGGGAATTAATACCTCCGATGTCGCTCTTCGAAGAACAATCAGCGCCCCTGTTTCTTTCCCGGAAAATTTCCTCGATTCATCCTGCCTCACCGTAAGTCCTTCCTTTGATTTCAATTTTCCGCCGTTTTCGATTCGTTTCCGATCGTTTGGAGTTTGTAATTCATGAAATGAATGAATCGATGCAGCAATTTCAAGGCTCTTCAGGGTGGGACGTGGATTTGCAGAATCTGTACAATGTGGGTTTCGATCAAGGAAGATCATCAAACGCCTTTTCATCTCAACCTTACACAGGTAAAGATGAGATTGAAACTGTGCAGTCAATTCTTCTTCCGCTTGTTCTTGCAATTATGACTGGAGAAAGAAAATTCAGAGAAATTAAGAAAGTGGATATTTAAAAATTGATAGATTGAGACATTTCCATGGTCCCTCCATCAAATTTTCATTTTTTTTTCTGAAATTTTTATGAGCCCATTGGATATTCCCAATGCTTTGAGAAAAAGAAAAGAATTTATATAGATTCCCACCAATTTTGCACTATTCTTTCTAATGGGTTTGTCCACCACTTTCAATTGTGCACCACTTTGATCCAC

mRNA sequence

GCCCCATTCCCCTTTCTCTCCCTCTCTCTCTTCTGCCTTTCTCTCTCTCTCTCTACACCAATAATTCCGGCCAGTTGCAGTCACTCTCCGACCACCCCCCAACTTTTTCACCTTTATATACTTCCCACCCCCCTTTTCTCTCTCGATTAATCTTCAAACCCATTTTCCCCCTCCTTGTTGAGACCTTCTTTTGGTTCTTGGTGGTGGGATTTCCTTCAAATTTGGGGGTTTCTCTGTTTTTTTAAGGTGGGGTTTTGGAACAAAGAAAGATGAACAGAGCATTGCCAGAAATGTCGAACACGGCTGAGAATTGTGTTGACACTCTCACTGTTCTTGAGAGGCAGAGGGCTCGTTTCAAATGGCAACAAGATCAGCTTTTGTATCAGCAGCAGCAGCTGCAGTCATTCAATGGGATGATGGATTACGGCGCTGGATTTCCACCGTCGGATCACCTCACCGGGTTTCCGGGCTTCATGAGTGCAGCCGGCGCCGGCGGCGATGGTGGGTTGTCACTTGTGGAGATGGTAATGGGAGCAGTGAAGCCTGACCCTGGTTTGGAAGATGGGTGGTCTGATCCTTCTCTGTTGTTGAATCCCCCCACTGCTTATGAACTAAATTCTTCTCTTTCTAGAACCTCCAGCTGCCCGCCGGCGGTGAATCCAGCGGCGGCGGCTGGAAGAGAAAGCTTCAAGAAAAGGAAAGCTGAGAAAGTTCAGAACCCCATTAACAACAAAGAGAAGAGGATCAAAGCAAGTTCAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATTATCAAAAACGACAGATCAAAACAGCACCAAGAACAACAATTCAACCATTACAACCACAACAAACAACAACAGAGAAACTTCAGCTGATACCTCCAAAGCCTCAGAGGTTAAAAAGCCTGATTACATTCATGTCAGAGCTCGCCGTGGCCAAGCCACTGATAGCCATAGCTTAGCAGAAAGAGCTAGAAGGGAAAAAATCAGTGAAAGAATGAAGTACTTGCAAGATTTAGTACCAGGATGCAACAAAATCACTGGAAAAGCTGGAATGCTCGACGAGATCATAAACTATGTTCAATCTCTTCAAAGACAAGTGGAGTTCTTGTCCATGAAGTTAGCTGCAGTTAATCCAAGGCTGGACTTCAATGTGGATGATCTCTTCCTCAAAGAGGTATTTCCCCCTCCTTGCACCACCGCAAACTTCGCGGCGATCGGTGGAATTTCATCAGAGATCACAGATCCTTCATCCTACTTCCAATTTAATCGAAACAATCAACAAATCGTTCCGTGTTGTGGATTAGAAATGGGAATTAATACCTCCGATGTCGCTCTTCGAAGAACAATCAGCGCCCCTGTTTCTTTCCCGGAAAATTTCCTCGATTCATCCTGCCTCACCCAATTTCAAGGCTCTTCAGGGTGGGACGTGGATTTGCAGAATCTGTACAATGTGGGTTTCGATCAAGGAAGATCATCAAACGCCTTTTCATCTCAACCTTACACAGGTAAAGATGAGATTGAAACTGTGCAGTCAATTCTTCTTCCGCTTGTTCTTGCAATTATGACTGGAGAAAGAAAATTCAGAGAAATTAAGAAAGTGGATATTTAAAAATTGATAGATTGAGACATTTCCATGGTCCCTCCATCAAATTTTCATTTTTTTTTCTGAAATTTTTATGAGCCCATTGGATATTCCCAATGCTTTGAGAAAAAGAAAAGAATTTATATAGATTCCCACCAATTTTGCACTATTCTTTCTAATGGGTTTGTCCACCACTTTCAATTGTGCACCACTTTGATCCAC

Coding sequence (CDS)

ATGAACAGAGCATTGCCAGAAATGTCGAACACGGCTGAGAATTGTGTTGACACTCTCACTGTTCTTGAGAGGCAGAGGGCTCGTTTCAAATGGCAACAAGATCAGCTTTTGTATCAGCAGCAGCAGCTGCAGTCATTCAATGGGATGATGGATTACGGCGCTGGATTTCCACCGTCGGATCACCTCACCGGGTTTCCGGGCTTCATGAGTGCAGCCGGCGCCGGCGGCGATGGTGGGTTGTCACTTGTGGAGATGGTAATGGGAGCAGTGAAGCCTGACCCTGGTTTGGAAGATGGGTGGTCTGATCCTTCTCTGTTGTTGAATCCCCCCACTGCTTATGAACTAAATTCTTCTCTTTCTAGAACCTCCAGCTGCCCGCCGGCGGTGAATCCAGCGGCGGCGGCTGGAAGAGAAAGCTTCAAGAAAAGGAAAGCTGAGAAAGTTCAGAACCCCATTAACAACAAAGAGAAGAGGATCAAAGCAAGTTCAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATTATCAAAAACGACAGATCAAAACAGCACCAAGAACAACAATTCAACCATTACAACCACAACAAACAACAACAGAGAAACTTCAGCTGATACCTCCAAAGCCTCAGAGGTTAAAAAGCCTGATTACATTCATGTCAGAGCTCGCCGTGGCCAAGCCACTGATAGCCATAGCTTAGCAGAAAGAGCTAGAAGGGAAAAAATCAGTGAAAGAATGAAGTACTTGCAAGATTTAGTACCAGGATGCAACAAAATCACTGGAAAAGCTGGAATGCTCGACGAGATCATAAACTATGTTCAATCTCTTCAAAGACAAGTGGAGTTCTTGTCCATGAAGTTAGCTGCAGTTAATCCAAGGCTGGACTTCAATGTGGATGATCTCTTCCTCAAAGAGGTATTTCCCCCTCCTTGCACCACCGCAAACTTCGCGGCGATCGGTGGAATTTCATCAGAGATCACAGATCCTTCATCCTACTTCCAATTTAATCGAAACAATCAACAAATCGTTCCGTGTTGTGGATTAGAAATGGGAATTAATACCTCCGATGTCGCTCTTCGAAGAACAATCAGCGCCCCTGTTTCTTTCCCGGAAAATTTCCTCGATTCATCCTGCCTCACCCAATTTCAAGGCTCTTCAGGGTGGGACGTGGATTTGCAGAATCTGTACAATGTGGGTTTCGATCAAGGAAGATCATCAAACGCCTTTTCATCTCAACCTTACACAGGTAAAGATGAGATTGAAACTGTGCAGTCAATTCTTCTTCCGCTTGTTCTTGCAATTATGACTGGAGAAAGAAAATTCAGAGAAATTAAGAAAGTGGATATTTAA

Protein sequence

MNRALPEMSNTAENCVDTLTVLERQRARFKWQQDQLLYQQQQLQSFNGMMDYGAGFPPSDHLTGFPGFMSAAGAGGDGGLSLVEMVMGAVKPDPGLEDGWSDPSLLLNPPTAYELNSSLSRTSSCPPAVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEELSKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFLKEVFPPPCTTANFAAIGGISSEITDPSSYFQFNRNNQQIVPCCGLEMGINTSDVALRRTISAPVSFPENFLDSSCLTQFQGSSGWDVDLQNLYNVGFDQGRSSNAFSSQPYTGKDEIETVQSILLPLVLAIMTGERKFREIKKVDI

Homology

[Close]

BLAST of CmaCh11G010930 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-45
Identity = 134/286 (46.85%), Postives = 166/286 (58.04%), Query Frame = 0


Query: 128 AVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEELSKTTDQN--STK 187
           +++P    G  +FKKRK +      N K+K++   + ++  EE EEE SK T+QN  STK
Sbjct: 79  SISPETTLGTGNFKKRKFDTETKDCNEKKKKM-TMNRDDLVEEGEEEKSKITEQNNGSTK 138

Query: 188 NNNSTITTTTNNNRETSADTSKAS-EVKKPDYIHVRARRGQATDSHSLAERARREKISER 247
           +               S D+SK + E++K DYIHVRARRGQATDSHS+AER RREKISER
Sbjct: 139 SIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISER 198

Query: 248 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFLKE 307
           MK+LQDLVPGC+KITGKAGMLDEIINYVQSLQRQ+EFLSMKLA VNPR DF++DD+F KE
Sbjct: 199 MKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKE 258

Query: 308 VFPPPCTT-----------ANFAAIGGISSEITDPSSYFQFNRNNQQIVPCCGLEMGINT 367
           V   P T            ++     G SSE+ + S Y   N   Q           +NT
Sbjct: 259 VASTPMTVVPSPEMVLSGYSHEMVHSGYSSEMVN-SGYLHVNPMQQ-----------VNT 318

Query: 368 SDVALRRTISAPVSFPENFLDSSCLTQFQGSSGWDVDLQNLY-NVG 399
           S   L                 SC    +  S WD  +QNLY N+G
Sbjct: 319 SSDPL-----------------SCFNNGEAPSMWDSHVQNLYGNLG 334

[Close]

BLAST of CmaCh11G010930 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.4e-38
Identity = 121/293 (41.30%), Postives = 164/293 (55.97%), Query Frame = 0


Query: 116 NSSLSRTSSCP---PAVN--PAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEE 175
           N  + R SS P   P  +  PA  +  E  +KRK +  Q    N    + +S E E++E+
Sbjct: 175 NEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQ----NSPSAVSSSKEIEEKED 234

Query: 176 EEEELSKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSH 235
            + +  K +++N  K                S D  K       DYIHVRARRGQATDSH
Sbjct: 235 SDPKRCKKSEENGDKTK--------------SIDPYK-------DYIHVRARRGQATDSH 294

Query: 236 SLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVN 295
           SLAER RREKISERMK LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN
Sbjct: 295 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVN 354

Query: 296 PRLDFNVDDLFLKEVFPPPCTTANFAAIGGISSEITDPSSYFQFNRNNQQIVPCCGLEMG 355
            RLDFN+D L  K++FP      +   +  +  + +  +     +  N Q+ P       
Sbjct: 355 TRLDFNMDALLSKDIFPSSNNLMHHQQV--LQLDSSAETLLGDHHNKNLQLNPDISSNNV 414

Query: 356 INTSDVALRRTISAPVSFPENFLDSSCLTQFQGSSGWDVDLQNLYNVGFDQGR 404
           IN  + +  R+  + +    +F DS  ++Q+   S  + DL ++ ++GF Q R
Sbjct: 415 INPLETSETRSFISHLPTLAHFTDS--ISQYSTFS--EDDLHSIIHMGFAQNR 436

[Close]

BLAST of CmaCh11G010930 vs. ExPASy Swiss-Prot
Match: Q93VJ4 (Transcription factor BEE 2 OS=Arabidopsis thaliana OX=3702 GN=BEE2 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.2e-35
Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 165 EEKEEEEEEELSKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRG 224
           E K E+ E++  K  D+          T  +   +   ++T  +SE++KPDYIHVRARRG
Sbjct: 97  EGKTEKREKKKIKAEDE----------TEPSMKGKSNMSNTETSSEIQKPDYIHVRARRG 156

Query: 225 QATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 284
           +ATD HSLAERARREKIS++MK LQD+VPGCNK+TGKAGMLDEIINYVQSLQ+QVEFLSM
Sbjct: 157 EATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 216

Query: 285 KLAAVNPRLDFNVDDLFLKE 305
           KL+ +NP L+ ++DDL  K+
Sbjct: 217 KLSVINPELECHIDDLSAKQ 226

[Close]

BLAST of CmaCh11G010930 vs. ExPASy Swiss-Prot
Match: Q9ZPW3 (Transcription factor HBI1 OS=Arabidopsis thaliana OX=3702 GN=HBI1 PE=1 SV=3)

HSP 1 Score: 150.6 bits (379), Expect = 4.2e-35
Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 116 NSSLSRTSSCPPAVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEEL 175
           + S+SRTSSC    +       E   K   E     + NK K    + EE+K E++ +  
Sbjct: 89  HESISRTSSC----HMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVE 148

Query: 176 SKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSHSLAER 235
           ++T      K+N      +++ ++ETS     ASE +K DYIHVRARRGQATD HSLAER
Sbjct: 149 AETESSMKGKSNMGNTEASSDTSKETS---KGASENQKLDYIHVRARRGQATDRHSLAER 208

Query: 236 ARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 295
           ARREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+ 
Sbjct: 209 ARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 268

Query: 296 NVDDLFLKE 305
            V+D+ +K+
Sbjct: 269 AVEDVSVKQ 270

[Close]

BLAST of CmaCh11G010930 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.2e-35
Identity = 126/304 (41.45%), Postives = 170/304 (55.92%), Query Frame = 0


Query: 116 NSSLSRTSSCP---PAVNPAAAAGRESFKKRKA----EKVQNPINNKEKRIKASSEEEKE 175
           +  L+R SS P     V+P    G E  +KRK+    +  +NPI+        S   EK 
Sbjct: 192 SGKLTRVSSTPALKALVSPEVTPGGEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKN 251

Query: 176 EEEEEELSKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKP----DYIHVRARRG 235
             +    SK++++   K          +   E   + +K++  K P    DYIHVRARRG
Sbjct: 252 GGKGG--SKSSEEKGGKRRRE---EEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRG 311

Query: 236 QATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 295
           QATDSHSLAER RREKI ERMK LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSM
Sbjct: 312 QATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 371

Query: 296 KLAAVN-PRLDFNVDDLFLKEVFPPPCTTANFAAIGGISSEITDPSSYFQFN--RNNQQI 355
           KL++VN  RLDFNVD L  K+V  P  ++ N     G+ S+ +      Q N   NN Q+
Sbjct: 372 KLSSVNDTRLDFNVDALVSKDVMIP--SSNNRLHEEGLQSKSSSHHHQQQLNIYNNNSQL 431

Query: 356 VPCCGLEMGINTSDVALRRTISA--PVSFPENFLDSSCLTQFQGSSGW-----DVDLQNL 399
           +P       I+++++ L+  +++    +   +F     LTQF  S        + DLQ++
Sbjct: 432 LP------NISSNNMMLQSPMNSLETSTLARSFTHLPTLTQFTDSISQYQMFSEEDLQSI 482

[Close]

BLAST of CmaCh11G010930 vs. TAIR 10
Match: AT4G34530.1 (cryptochrome-interacting basic-helix-loop-helix 1 )

HSP 1 Score: 184.9 bits (468), Expect = 1.4e-46
Identity = 134/286 (46.85%), Postives = 166/286 (58.04%), Query Frame = 0


Query: 128 AVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEELSKTTDQN--STK 187
           +++P    G  +FKKRK +      N K+K++   + ++  EE EEE SK T+QN  STK
Sbjct: 79  SISPETTLGTGNFKKRKFDTETKDCNEKKKKM-TMNRDDLVEEGEEEKSKITEQNNGSTK 138

Query: 188 NNNSTITTTTNNNRETSADTSKAS-EVKKPDYIHVRARRGQATDSHSLAERARREKISER 247
           +               S D+SK + E++K DYIHVRARRGQATDSHS+AER RREKISER
Sbjct: 139 SIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISER 198

Query: 248 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFLKE 307
           MK+LQDLVPGC+KITGKAGMLDEIINYVQSLQRQ+EFLSMKLA VNPR DF++DD+F KE
Sbjct: 199 MKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKE 258

Query: 308 VFPPPCTT-----------ANFAAIGGISSEITDPSSYFQFNRNNQQIVPCCGLEMGINT 367
           V   P T            ++     G SSE+ + S Y   N   Q           +NT
Sbjct: 259 VASTPMTVVPSPEMVLSGYSHEMVHSGYSSEMVN-SGYLHVNPMQQ-----------VNT 318

Query: 368 SDVALRRTISAPVSFPENFLDSSCLTQFQGSSGWDVDLQNLY-NVG 399
           S   L                 SC    +  S WD  +QNLY N+G
Sbjct: 319 SSDPL-----------------SCFNNGEAPSMWDSHVQNLYGNLG 334

[Close]

BLAST of CmaCh11G010930 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-39
Identity = 121/293 (41.30%), Postives = 164/293 (55.97%), Query Frame = 0


Query: 116 NSSLSRTSSCP---PAVN--PAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEE 175
           N  + R SS P   P  +  PA  +  E  +KRK +  Q    N    + +S E E++E+
Sbjct: 175 NEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQ----NSPSAVSSSKEIEEKED 234

Query: 176 EEEELSKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSH 235
            + +  K +++N  K                S D  K       DYIHVRARRGQATDSH
Sbjct: 235 SDPKRCKKSEENGDKTK--------------SIDPYK-------DYIHVRARRGQATDSH 294

Query: 236 SLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVN 295
           SLAER RREKISERMK LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN
Sbjct: 295 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVN 354

Query: 296 PRLDFNVDDLFLKEVFPPPCTTANFAAIGGISSEITDPSSYFQFNRNNQQIVPCCGLEMG 355
            RLDFN+D L  K++FP      +   +  +  + +  +     +  N Q+ P       
Sbjct: 355 TRLDFNMDALLSKDIFPSSNNLMHHQQV--LQLDSSAETLLGDHHNKNLQLNPDISSNNV 414

Query: 356 INTSDVALRRTISAPVSFPENFLDSSCLTQFQGSSGWDVDLQNLYNVGFDQGR 404
           IN  + +  R+  + +    +F DS  ++Q+   S  + DL ++ ++GF Q R
Sbjct: 415 INPLETSETRSFISHLPTLAHFTDS--ISQYSTFS--EDDLHSIIHMGFAQNR 436

[Close]

BLAST of CmaCh11G010930 vs. TAIR 10
Match: AT2G18300.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-36
Identity = 100/191 (52.36%), Postives = 129/191 (67.54%), Query Frame = 0


Query: 116 NSSLSRTSSCPPAVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEEL 175
           + S+SRTSSC    +       E   K   E     + NK K    + EE+K E++ +  
Sbjct: 89  HESISRTSSC----HMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVE 148

Query: 176 SKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSHSLAER 235
           ++T      K+N      +++ ++ETS     ASE +K DYIHVRARRGQATD HSLAER
Sbjct: 149 AETESSMKGKSNMGNTEASSDTSKETS---KGASENQKLDYIHVRARRGQATDRHSLAER 208

Query: 236 ARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 295
           ARREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+ 
Sbjct: 209 ARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 268

Query: 296 NVDDLFLKEVF 307
            V+D+ +K+ +
Sbjct: 269 AVEDVSVKQAY 272

[Close]

BLAST of CmaCh11G010930 vs. TAIR 10
Match: AT2G18300.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 3.0e-36
Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 116 NSSLSRTSSCPPAVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEEL 175
           + S+SRTSSC    +       E   K   E     + NK K    + EE+K E++ +  
Sbjct: 89  HESISRTSSC----HMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVE 148

Query: 176 SKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSHSLAER 235
           ++T      K+N      +++ ++ETS     ASE +K DYIHVRARRGQATD HSLAER
Sbjct: 149 AETESSMKGKSNMGNTEASSDTSKETS---KGASENQKLDYIHVRARRGQATDRHSLAER 208

Query: 236 ARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 295
           ARREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+ 
Sbjct: 209 ARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 268

Query: 296 NVDDLFLKE 305
            V+D+ +K+
Sbjct: 269 AVEDVSVKQ 270

[Close]

BLAST of CmaCh11G010930 vs. TAIR 10
Match: AT2G18300.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 3.0e-36
Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 116 NSSLSRTSSCPPAVNPAAAAGRESFKKRKAEKVQNPINNKEKRIKASSEEEKEEEEEEEL 175
           + S+SRTSSC    +       E   K   E     + NK K    + EE+K E++ +  
Sbjct: 89  HESISRTSSC----HMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVE 148

Query: 176 SKTTDQNSTKNNNSTITTTTNNNRETSADTSKASEVKKPDYIHVRARRGQATDSHSLAER 235
           ++T      K+N      +++ ++ETS     ASE +K DYIHVRARRGQATD HSLAER
Sbjct: 149 AETESSMKGKSNMGNTEASSDTSKETS---KGASENQKLDYIHVRARRGQATDRHSLAER 208

Query: 236 ARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 295
           ARREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+ 
Sbjct: 209 ARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 268

Query: 296 NVDDLFLKE 305
            V+D+ +K+
Sbjct: 269 AVEDVSVKQ 270

The following BLAST results are available for this feature:

BLAST of CmaCh11G010930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY61	2.0e-45	46.85	Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1	[more]
Q9SRT2	2.4e-38	41.30	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q93VJ4	4.2e-35	59.29	Transcription factor BEE 2 OS=Arabidopsis thaliana OX=3702 GN=BEE2 PE=1 SV=1	[more]
Q9ZPW3	4.2e-35	52.91	Transcription factor HBI1 OS=Arabidopsis thaliana OX=3702 GN=HBI1 PE=1 SV=3	[more]
Q9FJL4	7.2e-35	41.45	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]

BLAST of CmaCh11G010930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34530.1	1.4e-46	46.85	cryptochrome-interacting basic-helix-loop-helix 1	[more]
AT3G07340.1	1.7e-39	41.30	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G18300.1	1.8e-36	52.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G18300.2	3.0e-36	52.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G18300.3	3.0e-36	52.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..204
None	No IPR available	PANTHER	PTHR12565:SF395	TRANSCRIPTION FACTOR BHLH63-LIKE	coord: 17..406
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 215..300 e-value: 7.95597E-66 score: 203.828
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 231..281 e-value: 2.3E-9 score: 47.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 229..276 e-value: 1.2E-6 score: 28.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 225..275 score: 15.579952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 222..296 e-value: 6.1E-15 score: 57.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 223..294
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 17..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G010930.1	CmaCh11G010930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity