CmaCh11G010270 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G010270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc-finger homeodomain protein 9-like
Location	Cma_Chr11: 5597756 .. 5598640 (+)
RNA-Seq Expression	CmaCh11G010270
Synteny	CmaCh11G010270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGATTCCTGCAATTTCCACCGCCGCTGCCGCCATTACCACCGGCGGAGGAGGAGCTGTGAAATTCCCTGAATTTGACGCGGAAACACCCATCAAATTCCAACCAACCACCAAATCTCACCCCTTCACCAATGGTGTCCTCAAGCGCCACCACCACACGCCGCCCCCACCTCCGTCGCTGGTCTACAAAGAATGCCTCAAGAATCATGCTGCCAGTATGGGCGGCCATGCTCTGGACGGCTGCGGCGAGTTCATGCCTTCCCCTACCGCTACTACCACAGATCCAACCTCTTTCAAATGCGCCGCCTGTGGCTGCCATCGGAATTTCCACCGCCGTGACCCGGAAGATACAATCGCCACTCCGACGACAACCCATGTCATTGAGTATCAACCCCACCACCGTCATCATCCGCCGCCGCCGCAGGCGGCAGCCCACAGAAGCCCAAACTCTGCCTCTCCTCCACCGATCTCCTCCTCGTACTACCCTTCAGCACCCCACATGCTTCTCGCCTTATCCGGCGGCATGACAGAGAACGCCGGTGGCGGATTCCACCACTCAATTCTGACGCCGAGTTCGAATTCGAGAAAACGATTCAGAACGAAATTTACTCAAAATCAAAAGGATAAAATGTATGAATTTGCAGAGAAAGTGGGATGGAAGATTCAGAAACGAGACGAGGATTTGATCCAAGAATTCTGTAGCCACGTCGGAGTCGACAGAGGCGTTCTCAAAGTCTGGATGCACAACAACAAGAACACTCTCTGTAAAAAAGACGGCGCCCAAAACATCAACGGCCACGGCGATGGAGACGACGACACAAAAATTAACGGCGGCGGCGAGCCAAACGCCGCCGCAAATGGGTCATCATCTTCCTCTTGA

mRNA sequence

ATGGATTTGATTCCTGCAATTTCCACCGCCGCTGCCGCCATTACCACCGGCGGAGGAGGAGCTGTGAAATTCCCTGAATTTGACGCGGAAACACCCATCAAATTCCAACCAACCACCAAATCTCACCCCTTCACCAATGGTGTCCTCAAGCGCCACCACCACACGCCGCCCCCACCTCCGTCGCTGGTCTACAAAGAATGCCTCAAGAATCATGCTGCCAGTATGGGCGGCCATGCTCTGGACGGCTGCGGCGAGTTCATGCCTTCCCCTACCGCTACTACCACAGATCCAACCTCTTTCAAATGCGCCGCCTGTGGCTGCCATCGGAATTTCCACCGCCGTGACCCGGAAGATACAATCGCCACTCCGACGACAACCCATGTCATTGAGTATCAACCCCACCACCGTCATCATCCGCCGCCGCCGCAGGCGGCAGCCCACAGAAGCCCAAACTCTGCCTCTCCTCCACCGATCTCCTCCTCGTACTACCCTTCAGCACCCCACATGCTTCTCGCCTTATCCGGCGGCATGACAGAGAACGCCGGTGGCGGATTCCACCACTCAATTCTGACGCCGAGTTCGAATTCGAGAAAACGATTCAGAACGAAATTTACTCAAAATCAAAAGGATAAAATGTATGAATTTGCAGAGAAAGTGGGATGGAAGATTCAGAAACGAGACGAGGATTTGATCCAAGAATTCTGTAGCCACGTCGGAGTCGACAGAGGCGTTCTCAAAGTCTGGATGCACAACAACAAGAACACTCTCTGTAAAAAAGACGGCGCCCAAAACATCAACGGCCACGGCGATGGAGACGACGACACAAAAATTAACGGCGGCGGCGAGCCAAACGCCGCCGCAAATGGGTCATCATCTTCCTCTTGA

Coding sequence (CDS)

ATGGATTTGATTCCTGCAATTTCCACCGCCGCTGCCGCCATTACCACCGGCGGAGGAGGAGCTGTGAAATTCCCTGAATTTGACGCGGAAACACCCATCAAATTCCAACCAACCACCAAATCTCACCCCTTCACCAATGGTGTCCTCAAGCGCCACCACCACACGCCGCCCCCACCTCCGTCGCTGGTCTACAAAGAATGCCTCAAGAATCATGCTGCCAGTATGGGCGGCCATGCTCTGGACGGCTGCGGCGAGTTCATGCCTTCCCCTACCGCTACTACCACAGATCCAACCTCTTTCAAATGCGCCGCCTGTGGCTGCCATCGGAATTTCCACCGCCGTGACCCGGAAGATACAATCGCCACTCCGACGACAACCCATGTCATTGAGTATCAACCCCACCACCGTCATCATCCGCCGCCGCCGCAGGCGGCAGCCCACAGAAGCCCAAACTCTGCCTCTCCTCCACCGATCTCCTCCTCGTACTACCCTTCAGCACCCCACATGCTTCTCGCCTTATCCGGCGGCATGACAGAGAACGCCGGTGGCGGATTCCACCACTCAATTCTGACGCCGAGTTCGAATTCGAGAAAACGATTCAGAACGAAATTTACTCAAAATCAAAAGGATAAAATGTATGAATTTGCAGAGAAAGTGGGATGGAAGATTCAGAAACGAGACGAGGATTTGATCCAAGAATTCTGTAGCCACGTCGGAGTCGACAGAGGCGTTCTCAAAGTCTGGATGCACAACAACAAGAACACTCTCTGTAAAAAAGACGGCGCCCAAAACATCAACGGCCACGGCGATGGAGACGACGACACAAAAATTAACGGCGGCGGCGAGCCAAACGCCGCCGCAAATGGGTCATCATCTTCCTCTTGA

Protein sequence

MDLIPAISTAAAAITTGGGGAVKFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPPSLVYKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATPTTTHVIEYQPHHRHHPPPPQAAAHRSPNSASPPPISSSYYPSAPHMLLALSGGMTENAGGGFHHSILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQEFCSHVGVDRGVLKVWMHNNKNTLCKKDGAQNINGHGDGDDDTKINGGGEPNAAANGSSSSS

Homology

[Close]

BLAST of CmaCh11G010270 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.5e-76
Identity = 167/310 (53.87%), Postives = 200/310 (64.52%), Query Frame = 0


Query: 23  KFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPPSLVYKECLKNHAASMGGHALDG 82
           K PE ++ETP + QP  K   F+NG++KRHHH       + YKECLKNHAA++GGHALDG
Sbjct: 12  KSPEPESETPTRIQP-AKPISFSNGIIKRHHHHHHNNNKVTYKECLKNHAAAIGGHALDG 71

Query: 83  CGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATP--------TTTHVIEYQPH 142
           CGEFMPSP++T +DPTS KCAACGCHRNFHRR+ +D+ A P        TTT  IEYQPH
Sbjct: 72  CGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPH 131

Query: 143 HRHHPPPPQA-AAHRSPNSASPPPISSSYYPSAPHMLLALSGGMTE------NAGGGFHH 202
           HRHHPPPP A    RSPNS+SPPPISSSY      MLLALSG          N     +H
Sbjct: 132 HRHHPPPPLAPPLPRSPNSSSPPPISSSY------MLLALSGNNKTAPFSDLNFAAAANH 191

Query: 203 SILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQEFCSHVGVDRGVLKV 262
              TP   SRKRFRTKF+ NQK+KM+EFA+++GWKIQKRDED +++FC  +GVD+GVLKV
Sbjct: 192 LSATP--GSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKV 251

Query: 263 WMHNNKN----------TLCKKD---GAQNIN----------GHGDGDDDTKINGGGEPN 295
           WMHNNKN          T+ + D   G +N N          G G G      +GG +  
Sbjct: 252 WMHNNKNSFKFSGGGATTVQRNDNGIGGENSNDDGVRGLANDGDGGGGRFESDSGGADGG 311

[Close]

BLAST of CmaCh11G010270 vs. ExPASy Swiss-Prot
Match: Q9FIW9 (Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 7.2e-76
Identity = 166/319 (52.04%), Postives = 199/319 (62.38%), Query Frame = 0


Query: 1   MDLIPAISTAAAAITTGGGGAVKFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPP 60
           MD+ P I+T             K PE ++ETP + QP  K   F+NG++KRHHH    P 
Sbjct: 2   MDMTPTITTTTTP-------TPKSPEPESETPTRIQP-AKPISFSNGIIKRHHH-HHHPL 61

Query: 61  SLVYKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDT- 120
              YKECLKNHAA++GGHALDGCGEFMPSP++ ++DPTS KCAACGCHRNFHRRDP++  
Sbjct: 62  LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 121

Query: 121 ----IATPTTTHVIEYQPHHRHH-PPPPQAAAHRSPNSASPPPISSSYYPSAPHMLLALS 180
               I  P +T  +EYQPHHRHH PPPP     RSPNSASPPPISSSY      MLL+LS
Sbjct: 122 DSSQIPPPPST-AVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSY------MLLSLS 181

Query: 181 GGMTEN------------AGGGFHHSILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWK 240
           G    N            AG   HH        SRKRFRTKF+Q QK+KM+EFAE+VGWK
Sbjct: 182 GTNNNNNNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWK 241

Query: 241 IQKRDEDLIQEFCSHVGVDRGVLKVWMHNNKNTLCKKDGAQN------------------ 283
           +QKRDED +++FC  +GVD+ VLKVWMHNNKNT  ++D A N                  
Sbjct: 242 MQKRDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRDIAGNEIRQIDNGGGNHTPILAG 301

[Close]

BLAST of CmaCh11G010270 vs. ExPASy Swiss-Prot
Match: Q9LXG0 (Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.3e-58
Identity = 146/305 (47.87%), Postives = 185/305 (60.66%), Query Frame = 0


Query: 1   MDLIPAISTAAAAITTGGGGAVKFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPP 60
           MD+I   +T  + + +      + PE +A  PI+ QP  K   F+NG    HHH      
Sbjct: 1   MDVIATTTTIVSDLDS------RQPEIEA--PIRIQP-AKPISFSNGKRCHHHHLASEAV 60

Query: 61  SL-VYKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDT 120
           ++  YKECLKNHAA +GGHALDGCGEFMPSP+  + DP S  CAACGCHRNFHRR+ ED 
Sbjct: 61  AVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE-EDP 120

Query: 121 IATPTTTHVIEYQPHHRHH---PPPPQAAAHRSP---NSASPPPISSSYYPSAPHMLLAL 180
            +       IE++PH+RH    PPPP  A  RSP   +SASPPPISSSY      MLLAL
Sbjct: 121 SSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISSSY------MLLAL 180

Query: 181 SGGMTENAGGGFHHSILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQE 240
           SGG      GG +    T    SRKRFRTKF+Q QK+KM+EF+E+VGW++ K D+ +++E
Sbjct: 181 SGGR-----GGAN----TAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKE 240

Query: 241 FCSHVGVDRGVLKVWMHNNKNTLCKKDGAQNING----HGDGDDDTKINGGGEPNAAANG 295
           FC  +GVD+ V KVWMHNNK  +  + GA+  NG     G GD    +          NG
Sbjct: 241 FCREIGVDKSVFKVWMHNNK--ISGRSGARRANGGVVVGGVGDSRQSV-------VPTNG 271

[Close]

BLAST of CmaCh11G010270 vs. ExPASy Swiss-Prot
Match: Q9SEZ1 (Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.8e-49
Identity = 109/201 (54.23%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 64  YKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATP 123
           YKECLKNHAA++GGHALDGCGEFMPSPTAT+TDP+S +CAACGCHRNFHRRDP + +   
Sbjct: 31  YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLNFL 90

Query: 124 TTTHVIEYQPHHRHHPPPPQAAAHRSPNSAS-PPPISSSYYPSAP--HMLLALSGGMTEN 183
           T              PP    +   SP S     P+  SYY SAP  H++L+LS G    
Sbjct: 91  TA-------------PPISSPSGTESPPSRHVSSPVPCSYYTSAPPHHVILSLSSGF--- 150

Query: 184 AGGGFHHSILTPSSNS-----RKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQEFC 243
            G       +  S NS     RKR RTKFT  QK KM  FAEK GWKI   DE  ++EFC
Sbjct: 151 PGPSDQDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFC 210

Query: 244 SHVGVDRGVLKVWMHNNKNTL 257
           + VG++RGVLKVWMHNNK +L
Sbjct: 211 NEVGIERGVLKVWMHNNKYSL 215

[Close]

BLAST of CmaCh11G010270 vs. ExPASy Swiss-Prot
Match: Q6ER21 (Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD9 PE=3 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 5.4e-47
Identity = 112/267 (41.95%), Postives = 147/267 (55.06%), Query Frame = 0


Query: 33  IKFQPTTKSHPFTNGVLKRHHHTPPPPPSL--------VYKECLKNHAASMGGHALDGCG 92
           +K++P      F NG +K+        P++        VY+ECLKNHAAS+GGHALDGCG
Sbjct: 6   VKYKPLV----FPNGAIKKAAKPAAVAPAVGGGGGGETVYRECLKNHAASLGGHALDGCG 65

Query: 93  EFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATPTTTHVIEY--QPHHRHHPPP- 152
           EFMPSP A   DPTS +CAACGCHRNFHRR PE +   P    ++     P HR    P 
Sbjct: 66  EFMPSPAANPADPTSLRCAACGCHRNFHRRLPEGSPPPPPPPALLPAPPMPPHRGEETPE 125

Query: 153 --------------PQAAAHRSPNSASPPP-------ISSSYYPSAPHMLLAL-SGGMTE 212
                            + +    S SPPP           YYPSAPHMLL+L S G  +
Sbjct: 126 VRLPGVDGDESDSDSDGSEYDDERSVSPPPPPLAAAVAHQVYYPSAPHMLLSLGSSGQAQ 185

Query: 213 NAGGGFHHSILTPSSNS------------RKRFRTKFTQNQKDKMYEFAEKVGWKIQKRD 255
                    +++P++ +            RKRFRTKFT  QK +M E +E++GW++QKRD
Sbjct: 186 R----LPPQVMSPAAAAAPPPGGGGGGMPRKRFRTKFTAEQKQRMQELSERLGWRLQKRD 245

[Close]

BLAST of CmaCh11G010270 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 167/310 (53.87%), Postives = 200/310 (64.52%), Query Frame = 0


Query: 23  KFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPPSLVYKECLKNHAASMGGHALDG 82
           K PE ++ETP + QP  K   F+NG++KRHHH       + YKECLKNHAA++GGHALDG
Sbjct: 12  KSPEPESETPTRIQP-AKPISFSNGIIKRHHHHHHNNNKVTYKECLKNHAAAIGGHALDG 71

Query: 83  CGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATP--------TTTHVIEYQPH 142
           CGEFMPSP++T +DPTS KCAACGCHRNFHRR+ +D+ A P        TTT  IEYQPH
Sbjct: 72  CGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPH 131

Query: 143 HRHHPPPPQA-AAHRSPNSASPPPISSSYYPSAPHMLLALSGGMTE------NAGGGFHH 202
           HRHHPPPP A    RSPNS+SPPPISSSY      MLLALSG          N     +H
Sbjct: 132 HRHHPPPPLAPPLPRSPNSSSPPPISSSY------MLLALSGNNKTAPFSDLNFAAAANH 191

Query: 203 SILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQEFCSHVGVDRGVLKV 262
              TP   SRKRFRTKF+ NQK+KM+EFA+++GWKIQKRDED +++FC  +GVD+GVLKV
Sbjct: 192 LSATP--GSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKV 251

Query: 263 WMHNNKN----------TLCKKD---GAQNIN----------GHGDGDDDTKINGGGEPN 295
           WMHNNKN          T+ + D   G +N N          G G G      +GG +  
Sbjct: 252 WMHNNKNSFKFSGGGATTVQRNDNGIGGENSNDDGVRGLANDGDGGGGRFESDSGGADGG 311

[Close]

BLAST of CmaCh11G010270 vs. TAIR 10
Match: AT5G39760.1 (homeobox protein 23 )

HSP 1 Score: 285.4 bits (729), Expect = 5.1e-77
Identity = 166/319 (52.04%), Postives = 199/319 (62.38%), Query Frame = 0


Query: 1   MDLIPAISTAAAAITTGGGGAVKFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPP 60
           MD+ P I+T             K PE ++ETP + QP  K   F+NG++KRHHH    P 
Sbjct: 2   MDMTPTITTTTTP-------TPKSPEPESETPTRIQP-AKPISFSNGIIKRHHH-HHHPL 61

Query: 61  SLVYKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDT- 120
              YKECLKNHAA++GGHALDGCGEFMPSP++ ++DPTS KCAACGCHRNFHRRDP++  
Sbjct: 62  LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 121

Query: 121 ----IATPTTTHVIEYQPHHRHH-PPPPQAAAHRSPNSASPPPISSSYYPSAPHMLLALS 180
               I  P +T  +EYQPHHRHH PPPP     RSPNSASPPPISSSY      MLL+LS
Sbjct: 122 DSSQIPPPPST-AVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSY------MLLSLS 181

Query: 181 GGMTEN------------AGGGFHHSILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWK 240
           G    N            AG   HH        SRKRFRTKF+Q QK+KM+EFAE+VGWK
Sbjct: 182 GTNNNNNNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWK 241

Query: 241 IQKRDEDLIQEFCSHVGVDRGVLKVWMHNNKNTLCKKDGAQN------------------ 283
           +QKRDED +++FC  +GVD+ VLKVWMHNNKNT  ++D A N                  
Sbjct: 242 MQKRDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRDIAGNEIRQIDNGGGNHTPILAG 301

[Close]

BLAST of CmaCh11G010270 vs. TAIR 10
Match: AT5G15210.1 (homeobox protein 30 )

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-59
Identity = 146/305 (47.87%), Postives = 185/305 (60.66%), Query Frame = 0


Query: 1   MDLIPAISTAAAAITTGGGGAVKFPEFDAETPIKFQPTTKSHPFTNGVLKRHHHTPPPPP 60
           MD+I   +T  + + +      + PE +A  PI+ QP  K   F+NG    HHH      
Sbjct: 1   MDVIATTTTIVSDLDS------RQPEIEA--PIRIQP-AKPISFSNGKRCHHHHLASEAV 60

Query: 61  SL-VYKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDT 120
           ++  YKECLKNHAA +GGHALDGCGEFMPSP+  + DP S  CAACGCHRNFHRR+ ED 
Sbjct: 61  AVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE-EDP 120

Query: 121 IATPTTTHVIEYQPHHRHH---PPPPQAAAHRSP---NSASPPPISSSYYPSAPHMLLAL 180
            +       IE++PH+RH    PPPP  A  RSP   +SASPPPISSSY      MLLAL
Sbjct: 121 SSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISSSY------MLLAL 180

Query: 181 SGGMTENAGGGFHHSILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQE 240
           SGG      GG +    T    SRKRFRTKF+Q QK+KM+EF+E+VGW++ K D+ +++E
Sbjct: 181 SGGR-----GGAN----TAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKE 240

Query: 241 FCSHVGVDRGVLKVWMHNNKNTLCKKDGAQNING----HGDGDDDTKINGGGEPNAAANG 295
           FC  +GVD+ V KVWMHNNK  +  + GA+  NG     G GD    +          NG
Sbjct: 241 FCREIGVDKSVFKVWMHNNK--ISGRSGARRANGGVVVGGVGDSRQSV-------VPTNG 271

[Close]

BLAST of CmaCh11G010270 vs. TAIR 10
Match: AT1G69600.1 (zinc finger homeodomain 1 )

HSP 1 Score: 195.3 bits (495), Expect = 7.0e-50
Identity = 109/201 (54.23%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 64  YKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATP 123
           YKECLKNHAA++GGHALDGCGEFMPSPTAT+TDP+S +CAACGCHRNFHRRDP + +   
Sbjct: 31  YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLNFL 90

Query: 124 TTTHVIEYQPHHRHHPPPPQAAAHRSPNSAS-PPPISSSYYPSAP--HMLLALSGGMTEN 183
           T              PP    +   SP S     P+  SYY SAP  H++L+LS G    
Sbjct: 91  TA-------------PPISSPSGTESPPSRHVSSPVPCSYYTSAPPHHVILSLSSGF--- 150

Query: 184 AGGGFHHSILTPSSNS-----RKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQEFC 243
            G       +  S NS     RKR RTKFT  QK KM  FAEK GWKI   DE  ++EFC
Sbjct: 151 PGPSDQDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFC 210

Query: 244 SHVGVDRGVLKVWMHNNKNTL 257
           + VG++RGVLKVWMHNNK +L
Sbjct: 211 NEVGIERGVLKVWMHNNKYSL 215

[Close]

BLAST of CmaCh11G010270 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 90/195 (46.15%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 64  YKECLKNHAASMGGHALDGCGEFMPSPTATTTDPTSFKCAACGCHRNFHRRDPEDTIATP 123
           ++ECLKN A ++GGHA+DGCGEFMP+    T D  + KCAACGCHRNFHR++       P
Sbjct: 75  FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTID--ALKCAACGCHRNFHRKE------LP 134

Query: 124 TTTHVIEYQPHHRHHPPPPQAAAHRSPNSASPPPISSSYYPSAPHMLLALSGGMTENAGG 183
              H     P H+  PPPP      +P S  PPP        AP + LAL     E +  
Sbjct: 135 YFHHA---PPQHQPPPPPPGFYRLPAPVSYRPPP------SQAPPLQLALPPPQRERSED 194

Query: 184 GFHHSILTPSSNSRKRFRTKFTQNQKDKMYEFAEKVGWKIQKRDEDLIQEFCSHVGVDRG 243
               S        RKR RTKFT  QK++M   AE++GW+IQ++D+++IQ FC   GV R 
Sbjct: 195 PMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQ 252

Query: 244 VLKVWMHNNKNTLCK 259
           VLKVW+HNNK+TL K
Sbjct: 255 VLKVWLHNNKHTLGK 252

The following BLAST results are available for this feature:

BLAST of CmaCh11G010270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHF0	2.5e-76	53.87	Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S...	[more]
Q9FIW9	7.2e-76	52.04	Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1...	[more]
Q9LXG0	2.3e-58	47.87	Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 S...	[more]
Q9SEZ1	9.8e-49	54.23	Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1...	[more]
Q6ER21	5.4e-47	41.95	Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]

BLAST of CmaCh11G010270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28920.1	1.8e-77	53.87	homeobox protein 34	[more]
AT5G39760.1	5.1e-77	52.04	homeobox protein 23	[more]
AT5G15210.1	1.7e-59	47.87	homeobox protein 30	[more]
AT1G69600.1	7.0e-50	54.23	zinc finger homeodomain 1	[more]
AT5G65410.1	1.9e-39	46.15	homeobox protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 189..258 e-value: 7.0E-32 score: 111.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..161
None	No IPR available	PANTHER	PTHR31948:SF102	HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN	coord: 21..270
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 21..270
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 63..116 e-value: 3.9E-28 score: 97.6
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 64..115 e-value: 6.7E-31 score: 104.5
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 64..115 score: 27.348005
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 197..254 e-value: 3.4E-26 score: 89.0
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 191..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G010270.1	CmaCh11G010270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding